Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0003847

Physical Location & Seq

Genomic Coordinates Reverse (-)

12750198 .. 12758084

Gene Structure 7887 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2946 bp

ATGGCTCGGTTGGTTCTGCCATGCAGGAGTTCTGCTTTTGTGAGGACAAGTATTTTGGGTTTGATCTCATCTACTCCTCCTCAGTGTACCAGTCGTGTTAGATTGTTGGGGAATTCAGCCAAAAGGCTTACCAGATACAGGCGCTTCCTTACATCGGAGGTCGCATGCTCAAGGAATTATCGCATTCCATATACTGCATTACCTAGGGACAAACAAGGGAGCAGGAGGCTAATCTGTTCAGTTGCCACAGAAAGCTTGCCAGATCAAGTTGACGAATCCAAAATGGCTGCACCAAAGGAAATATTTTTGAAGGATTACAAAATGCCTGACTACTACTTTGACTCGGTGGATTTGAATTTTTCGCTGGGTGAGGAGAAAACAATTGTTAGTTCAAAAATATCCGTCTTCCCCAGGGTTGAAGGGTCTTCTTCCCCGTTGGTTCTGGATGGAACAGATCTCAAGTTACTTTCAGTTCGGATCAACGGCAAGGATTTAAAGGAGGAGGATTACAACTTGGATTCACGCCATCTGACACTAAAATCACTACCTAGTGGTGCATTTACTTTGGAAATTTTAACAGAGATGTATCCTCAGAAGAACACATCATTAGAGGGACTTTACAAGTCATCTGGGAATTTCTGCACCCAGTGTGAAGCTGAGGGTTTTCGTAAAATTACATTCTATCAGGACCGTCCTGATATAATGGCAAAATATAGATGCCGCATTGAAGCTGATAAATCATTATACCCAGTGTTGTTGTCCAATGGAAATCTCACAGAGCAGGGAGACCTAGAGGGTAATAGACATTATGCTCTCTGGGAGGATCCCTTCAAGAAACCCTGCTACTTATTTGCTTTGGTTGCTGGACAGCTTGAGAGCAGAGATGACACATTTACTACTCGTTCGGGTCGAAAAGTGGCTTTAAGGATTTGGACCCCTGCTCAAGATGTACCAAAAACAGCTCATGCCATGTATTCGCTTAAGGCAGCTATGAAATGGGATGAGGATGTTTTTGGTCTCGAGTATGATCTGGATCTCTTCAACATTGTGGCTGTTCCAGATTTTAACATGGGAGCTATGGAAAACAAGAGTTTGAATATCTTCAATTCCAGACTTGTCTTGGCATCTCCAGAAACTGCTTCCGATGCAGACTATGCAGCCATTTTGGGAGTCATTGGCCATGAGTATTTCCATAACTGGACTGGCAACAGAGTGACATGTCGTGATTGGTTTCAACTTAGCCTGAAGGAGGGTCTAACGGTTTTCCGTGATCAGGAATTTTCATCTGATATGGGGAGTCGCCCTGTAAAGCGGATTTCTGATGTTTCCAAACTTAGAAATTATCAGTTTCCACAGGATGCTGGTCCCATGGCTCATCCCGTGCGGCCACATTCTTACATCAAGATGGATAACTTTTATACAGTGACGGTGTATGAAAAGGGAGCTGAAGTGGTCAGGATGTACAAAACCTTACTTGGAAGTCAAGGGTTCCGAAATGGCATGGATCTTTACTTCAAGAGACATGATGGACAAGCCGTAACCTGTGAAGATTTTTATGCTGCCATGCGAGATGCTAACAATGCAGATTTTGCTAATTTCTTACTATGGTACTCCCAAGCTGGGACCCCAATTGTCAAAGTTGCATCCTCTTATAATGCTGAGGCCCGTACTTTTTCTTTGAAGTTTAGTCAAGAGGTACCACCAACTCCAGGGCAGCCCATTAAAGAACCCATGTTCATTCCCGTGGCAGTAGGTTTGCTCGACTCAACTGGCAAGGAGCTGCCTCTCTCCTCTGTTCATCATGACGGGACAGTGCAGTCTATTGCTAACAATGGTCAGCCAGTCTACACAACTGTTCTTAGAGTAACGAAGAAAGAAGAAGAGTTCGTCTTCTCTGATGTGTCTGAACGGCCAATTCCATCTCTGCTCCGGGGCTATAGTGCACCTATTCGTCTGGAGACTGATCTCACGGATAGTGATCTATTTTTACTCCTTGCTTATGATTCCGATGAATTCAACCGCTGGGAGGCCGGACAAGTGCTGGCACGTAAGCTGATGCTCGATTTGGTTGCTAATTTCCAACAAAACAAACCGTTGGTTTTGAATCCGAAGTTTGTGATTGGGCTCAGAAGAATACTATCTGACTTAAGCTTGGATAAAGAATTTGTGGCAAAGGCAATAACTCTCCCCGGTGAAGGAGAAATAATGGACATGATGGAAGTTGCAGATCCTGATGCTGTTCATGCTGTTCGTACTTTTATCAGGAAGCAGCTAGCCCATGAACTGAAAGCAGAGCTTCTTAGCACAGTTGAAAACAACAGGGGCTCAGAAGAGTATGTGTTTGATCACCCTAATTTGTCCAGGCGTGCTCTGAAGAATATTGCTCTTGCGTATCTTGCATTGCTCGAAGATTCAAAGTGTACCGAGCTTGTTCTAAATGAGTACAAGACTGCCACAAACATGACTGAGCAGTTTGCAGCTTTGGCAGCCATAGCACAAAACCCTGGTAAAACTCGTGATGATATTCTGGCCGACTTCTACAGCAAATGGCAGGAGGACTATTTGGTTGTGAATAAATGGTTTGCACTTCAAGCCATGTCTGACGTTCCCGGCAATGTTGAGAATGTGCGGAACCTCTTAAGCCACCCAGCATTCGACCTGCGCAATCCAAACAAGGTGTACTCACTGATCGGAGGTTTCTGTGGTTCTCCTGTGAATTTCCATGCAAAGGATGGGTCAGGCTACAAGTTTTTGGGAGAAATTGTGATGCAATTAGATAAAATAAACCCTCAGGTGGCCTCCCGCATGGTGTCAGCCTTCTCAAGGTGGAGGCGCTATGATGAAACCCGGCAAAACCTTGCCAAGGCACAGCTGGAGAAGATATTGTCTACCAATGGACTGTCTGAAAACGTGTTTGAGATCGCCTCCAAGAGCTTGGCCGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004177 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0006508 GO:0006518 GO:0006807 GO:0008150 GO:0008152 GO:0008233 GO:0008235 GO:0008237 GO:0008238 GO:0008270 GO:0009056 GO:0009987 GO:0016020 GO:0016787 GO:0019538 GO:0033218 GO:0034641 GO:0042277 GO:0042802 GO:0043167 GO:0043169 GO:0043170 GO:0043171 GO:0043603 GO:0044237 GO:0044238 GO:0044248 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0070006 GO:0070011 GO:0071704 GO:0071944 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

ko00480 ko01100 map00480 map01100

Pfam Domains

Protein Families

DUF3458 DUF3458_C Peptidase_M1

Protein Analysis

982

Amino Acids

110.66

Weight (kDa)

6.28

Isoelectric Point (pI)

43.18

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Peptidase_M1_N	PF17900	117 - 283	2e-15	Peptidase M1 N-terminal domain
Peptidase_M1	PF01433	324 - 533	3.8e-52	Peptidase family M1 domain
DUF3458	PF11940	541 - 655	7.3e-29	Domain of unknown function (DUF3458) Ig-like fold
DUF3458_C	PF17432	658 - 980	2.8e-124	Domain of unknown function (DUF3458_C) ARM repeats

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0003847)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63770 AT1G63770 AT1G63770 AT1G63770 AT1G63770 AT1G63770 AT1G63770
fragaria_vesca	FvH4_5g02730 FvH4_5g02730 FvH4_5g02730 FvH4_5g02730 FvH4_5g02730 FvH4_5g02730
malus_domestica	MD06G1086400.v1.1 MD14G1107600.v1.1
prunus_persica	Prupe.5G103000_v2.0.a1 Prupe.5G103000_v2.0.a1 Prupe.5G103100_v2.0.a1
pyrus_communis	pycom06g08300 pycom14g10260
rosa_chinensis	RchiOBHm_Chr7g0197201
rosa_laevigata	RLG00000003953
rosa_multiflora	Rmu_co8293827.1_g000001 Rmu_co8437137.1_g000001 Rmu_ssc0000465.1_g000015 Rmu_ssc0000465.1_g000016
rosa_roxburghii	Rroxscaffold_3G00258600
rosa_rugosa	Rorug07G0038500.1 Rorug07G0038600
rosa_samantha	Rh7AG163200 Rh7BG165200 Rh7CG171200 Rh7DG164600
rosa_wichuraiana	Rw7G014250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1653
AasI	GACNNNNNNGTC	1 cut(s)	1816
Acc16I	TGCGCA	1 cut(s)	2663
Acc36I	ACCTGC	1 cut(s)	2667
Acc65I	GGTACC	1 cut(s)	1696
AccB1I	GGYRCC	1 cut(s)	1696
AccI	GTMKAC	2 cut(s)	1845, 2888
AciI	CCGC	7 cut(s)	721, 1312, 1384, 2020, 2629, 2803, 2940
AclWI	GGATC	6 cut(s)	485, 818, 831, 1041, 1512, 2222
AcoI	YGGCCR	5 cut(s)	1177, 1385, 1910, 2529, 2937
AcsI	RAATTY	8 cut(s)	112, 355, 570, 634, 1277, 2012, 2162, 2716
AcuI	CTGAAG	3 cut(s)	1265, 1467, 2393
AdeI	CACNNNGTG	1 cut(s)	648
AflII	CTTAAG	3 cut(s)	980, 2146, 2638
AflIII	ACRYGT	2 cut(s)	1217, 2910
AjnI	CCWGG	4 cut(s)	410, 1708, 2360, 2503
Alw21I	GWGCWC	2 cut(s)	1945, 2371
Alw26I	GTCTC	4 cut(s)	780, 1022, 1513, 1952
Alw44I	GTGCAC	1 cut(s)	1941
AlwI	GGATC	6 cut(s)	485, 818, 831, 1041, 1512, 2222
AlwNI	CAGNNNCTG	2 cut(s)	1136, 2231
Ama87I	CYCGRG	1 cut(s)	1019
AoxI	GGCC	8 cut(s)	1177, 1385, 1662, 1910, 2028, 2529, 2796, 2937
ApaLI	GTGCAC	1 cut(s)	1941
ApeKI	GCWGC	9 cut(s)	287, 986, 1157, 1559, 1714, 1780, 2269, 2477, 2486
ApoI	RAATTY	8 cut(s)	112, 355, 570, 634, 1277, 2012, 2162, 2716
ArsI	GACNNNNNNTTYG	6 cut(s)	37, 69, 320, 352, 2720, 2752
Asp700I	GAANNNNTTC	1 cut(s)	1100
Asp718I	GGTACC	1 cut(s)	1696
AspA2I	CCTAGG	1 cut(s)	203
AspLEI	GCGC	3 cut(s)	144, 2664, 2835
AspS9I	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
AsuC2I	CCSGG	4 cut(s)	1931, 2190, 2610, 2848
AsuHPI	GGTGA	3 cut(s)	380, 2204, 2339
AsuNHI	GCTAGC	1 cut(s)	2272
AvaI	CYCGRG	1 cut(s)	1019
AvaII	GGWCC	4 cut(s)	688, 933, 1364, 1623
AvrII	CCTAGG	1 cut(s)	203
AxyI	CCTNAGG	1 cut(s)	2790
BaeGI	GKGCMC	1 cut(s)	1945
BalI	TGGCCA	1 cut(s)	1179
BamHI	GGATCC	1 cut(s)	823
BanI	GGYRCC	1 cut(s)	1696
BanII	GRGCYC	2 cut(s)	2127, 2327
BauI	CACGAG	1 cut(s)	2514
BbsI	GAAGAC	3 cut(s)	397, 417, 1882
Bbv12I	GWGCWC	2 cut(s)	1945, 2371
BbvCI	CCTCAGC	2 cut(s)	657, 1659
BbvI	GCAGC	9 cut(s)	274, 998, 1169, 1546, 1726, 1767, 2281, 2489, 2498
BccI	CCATC	7 cut(s)	440, 534, 1399, 1520, 1927, 2209, 2726
BceAI	ACGGC	3 cut(s)	499, 1520, 1925
BcgI	CGANNNNNNTGC	2 cut(s)	2051, 2085
BciT130I	CCWGG	4 cut(s)	412, 1710, 2362, 2505
BciVI	GTATCC	1 cut(s)	597
BclI	TGATCA	2 cut(s)	1270, 2344
BcnI	CCSGG	4 cut(s)	1931, 2190, 2610, 2848
BcoDI	GTCTC	4 cut(s)	780, 1022, 1513, 1952
BfaI	CTAG	4 cut(s)	204, 549, 791, 2273
BfmI	CTRYAG	2 cut(s)	1936, 2539
BfoI	RGCGCY	2 cut(s)	145, 2836
BfrI	CTTAAG	3 cut(s)	980, 2146, 2638
BfuAI	ACCTGC	1 cut(s)	2667
BfuI	GTATCC	1 cut(s)	597
BglII	AGATCT	1 cut(s)	454
BlnI	CCTAGG	1 cut(s)	203
Bme1390I	CCNGG	8 cut(s)	412, 1710, 1931, 2190, 2362, 2505, 2610, 2848
Bme18I	GGWCC	4 cut(s)	688, 933, 1364, 1623
BmeT110I	CYCGRG	1 cut(s)	1019
BmgT120I	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
BmiI	GGNNCC	8 cut(s)	825, 935, 1366, 1490, 1624, 1625, 1698, 2633
BmrFI	CCNGG	8 cut(s)	412, 1710, 1931, 2190, 2362, 2505, 2610, 2848
BmrI	ACTGGG	2 cut(s)	640, 743
BmsI	GCATC	9 cut(s)	707, 1133, 1135, 1348, 1561, 1652, 2046, 2224, 2757
BmtI	GCTAGC	1 cut(s)	2276
BmuI	ACTGGG	2 cut(s)	640, 743
BpiI	GAAGAC	3 cut(s)	397, 417, 1882
BplI	GAGNNNNNCTC	2 cut(s)	2909, 2941
BpmI	CTGGAG	4 cut(s)	1113, 1692, 1976, 2894
Bpu10I	CCTNAGC	2 cut(s)	657, 1659
BpuEI	CTTGAG	5 cut(s)	154, 443, 893, 927, 2806
BpuMI	CCSGG	4 cut(s)	1931, 2190, 2610, 2848
BsaAI	YACGTR	1 cut(s)	2048
BsaBI	GATNNNNATC	2 cut(s)	1032, 1977
BsaI	GGTCTC	2 cut(s)	780, 1022
BsaXI	ACNNNNNCTCC	4 cut(s)	1434, 1464, 2748, 2778
Bse1I	ACTGG	7 cut(s)	90, 646, 749, 1202, 1207, 1774, 1841
Bse21I	CCTNAGG	1 cut(s)	2790
Bse3DI	GCAATG	2 cut(s)	2399, 2620
Bse8I	GATNNNNATC	2 cut(s)	1032, 1977
BseBI	CCWGG	4 cut(s)	412, 1710, 2362, 2505
BseGI	GGATG	8 cut(s)	451, 1006, 1012, 1363, 1375, 1464, 1643, 2737
BseJI	GATNNNNATC	2 cut(s)	1032, 1977
BseMI	GCAATG	2 cut(s)	2399, 2620
BseMII	CTCAG	8 cut(s)	95, 605, 648, 1650, 2140, 2340, 2457, 2804
BseNI	ACTGG	7 cut(s)	90, 646, 749, 1202, 1207, 1774, 1841
BseRI	GAGGAG	5 cut(s)	66, 69, 386, 515, 1780
BseSI	GKGCMC	1 cut(s)	1945
BseXI	GCAGC	9 cut(s)	274, 998, 1169, 1546, 1726, 1767, 2281, 2489, 2498
BseYI	CCCAGC	4 cut(s)	364, 1619, 2022, 2647
BsgI	GTGCAG	3 cut(s)	273, 625, 1835
BshFI	GGCC	8 cut(s)	1179, 1387, 1664, 1912, 2030, 2531, 2798, 2939
BshNI	GGYRCC	1 cut(s)	1696
BsiHKAI	GWGCWC	2 cut(s)	1945, 2371
BsiHKCI	CYCGRG	1 cut(s)	1019
BsiSI	CCGG	5 cut(s)	1930, 2031, 2190, 2610, 2848
BslFI	GGGAC	5 cut(s)	221, 627, 1350, 1636, 1822
BsmAI	GTCTC	4 cut(s)	780, 1022, 1513, 1952
BsmFI	GGGAC	5 cut(s)	221, 627, 1350, 1636, 1822
BsmI	GAATGC	2 cut(s)	183, 2651
BsnI	GGCC	8 cut(s)	1179, 1387, 1664, 1912, 2030, 2531, 2798, 2939
Bso31I	GGTCTC	2 cut(s)	780, 1022
BsoBI	CYCGRG	1 cut(s)	1019
Bsp1286I	GDGCHC	4 cut(s)	1945, 2127, 2327, 2371
Bsp1407I	TGTACA	1 cut(s)	1461
Bsp19I	CCATGG	1 cut(s)	1368
BspACI	CCGC	7 cut(s)	721, 1312, 1384, 2020, 2629, 2803, 2940
BspANI	GGCC	8 cut(s)	1179, 1387, 1664, 1912, 2030, 2531, 2798, 2939
BspCNI	CTCAG	8 cut(s)	94, 604, 649, 1651, 2139, 2339, 2458, 2803
BspHI	TCATGA	1 cut(s)	1801
BspLI	GGNNCC	8 cut(s)	825, 935, 1366, 1490, 1624, 1625, 1698, 2633
BspMI	ACCTGC	1 cut(s)	2667
BspOI	GCTAGC	1 cut(s)	2276
BspPI	GGATC	6 cut(s)	485, 818, 831, 1041, 1512, 2222
BspT107I	GGYRCC	1 cut(s)	1696
BspTI	CTTAAG	3 cut(s)	980, 2146, 2638
BspTNI	GGTCTC	2 cut(s)	780, 1022
BsrDI	GCAATG	2 cut(s)	2399, 2620
BsrGI	TGTACA	1 cut(s)	1461
BsrI	ACTGG	7 cut(s)	90, 646, 749, 1202, 1207, 1774, 1841
BssSI	CACGAG	1 cut(s)	2514
BssT1I	CCWWGG	3 cut(s)	203, 1368, 2862
Bst2BI	CACGAG	1 cut(s)	2514
Bst2UI	CCWGG	4 cut(s)	412, 1710, 2362, 2505
Bst4CI	ACNGT	9 cut(s)	692, 1261, 1423, 1429, 1813, 1855, 2094, 2308, 2901
Bst6I	CTCTTC	3 cut(s)	1043, 1875, 2325
BstAFI	CTTAAG	3 cut(s)	980, 2146, 2638
BstAPI	GCANNNNNTGC	2 cut(s)	1154, 1589
BstAUI	TGTACA	1 cut(s)	1461
BstBAI	YACGTR	1 cut(s)	2048
BstC8I	GCNNGC	5 cut(s)	166, 257, 2043, 2274, 2367
BstDSI	CCRYGG	2 cut(s)	1368, 1743
BstENI	CCTNNNNNAGG	3 cut(s)	1247, 2821, 2861
BstF5I	GGATG	8 cut(s)	451, 1006, 1012, 1363, 1375, 1464, 1643, 2737
BstH2I	RGCGCY	2 cut(s)	145, 2836
BstHHI	GCGC	3 cut(s)	144, 2664, 2835
BstMAI	GTCTC	4 cut(s)	780, 1022, 1513, 1952
BstNI	CCWGG	4 cut(s)	412, 1710, 2362, 2505
BstNSI	RCATGY	2 cut(s)	168, 1221
BstSCI	CCNGG	8 cut(s)	410, 1708, 1929, 2188, 2360, 2503, 2608, 2846
BstSFI	CTRYAG	2 cut(s)	1936, 2539
BstSLI	GKGCMC	1 cut(s)	1945
BstV1I	GCAGC	9 cut(s)	274, 998, 1169, 1546, 1726, 1767, 2281, 2489, 2498
BstV2I	GAAGAC	3 cut(s)	397, 417, 1882
BstX2I	RGATCY	5 cut(s)	454, 823, 1033, 1504, 2227
BstXI	CCANNNNNNTGG	1 cut(s)	2935
BstYI	RGATCY	5 cut(s)	454, 823, 1033, 1504, 2227
Bsu36I	CCTNAGG	1 cut(s)	2790
BsuI	GTATCC	1 cut(s)	597
BsuRI	GGCC	8 cut(s)	1179, 1387, 1664, 1912, 2030, 2531, 2798, 2939
BtgI	CCRYGG	2 cut(s)	1368, 1743
BtsCI	GGATG	8 cut(s)	451, 1006, 1012, 1363, 1375, 1464, 1643, 2737
BtsIMutI	CAGTG	6 cut(s)	89, 653, 756, 1428, 1818, 2684
BveI	ACCTGC	1 cut(s)	2667
Cac8I	GCNNGC	5 cut(s)	166, 257, 2043, 2274, 2367
CaiI	CAGNNNCTG	2 cut(s)	1136, 2231
CciI	TCATGA	1 cut(s)	1801
CfoI	GCGC	3 cut(s)	144, 2664, 2835
Cfr13I	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
DraI	TTTAAA	1 cut(s)	495
DraIII	CACNNNGTG	1 cut(s)	648
DrdI	GACNNNNNNGTC	1 cut(s)	1816
DseDI	GACNNNNNNGTC	1 cut(s)	1816
EaeI	YGGCCR	5 cut(s)	1177, 1385, 1910, 2529, 2937
Eam1104I	CTCTTC	3 cut(s)	1043, 1875, 2325
EarI	CTCTTC	3 cut(s)	1043, 1875, 2325
Eco130I	CCWWGG	3 cut(s)	203, 1368, 2862
Eco24I	GRGCYC	2 cut(s)	2127, 2327
Eco31I	GGTCTC	2 cut(s)	780, 1022
Eco47I	GGWCC	4 cut(s)	688, 933, 1364, 1623
Eco57I	CTGAAG	3 cut(s)	1265, 1467, 2393
Eco81I	CCTNAGG	1 cut(s)	2790
Eco88I	CYCGRG	1 cut(s)	1019
EcoNI	CCTNNNNNAGG	3 cut(s)	1247, 2821, 2861
EcoO109I	RGGNCCY	1 cut(s)	1623
EcoRI	GAATTC	2 cut(s)	112, 2012
EcoRII	CCWGG	4 cut(s)	410, 1708, 2360, 2503
EcoT14I	CCWWGG	3 cut(s)	203, 1368, 2862
EcoT38I	GRGCYC	2 cut(s)	2127, 2327
ErhI	CCWWGG	3 cut(s)	203, 1368, 2862
FalI	AAGNNNNNCTT	2 cut(s)	2280, 2312
FaqI	GGGAC	5 cut(s)	221, 627, 1350, 1636, 1822
FauI	CCCGC	1 cut(s)	2810
FbaI	TGATCA	2 cut(s)	1270, 2344
FblI	GTMKAC	2 cut(s)	1845, 2888
FokI	GGATG	8 cut(s)	458, 1013, 1019, 1362, 1370, 1471, 1630, 2744
FriOI	GRGCYC	2 cut(s)	2127, 2327
FspBI	CTAG	4 cut(s)	204, 549, 791, 2273
FspI	TGCGCA	1 cut(s)	2663
GlaI	GCGC	3 cut(s)	143, 2663, 2834
GsaI	CCCAGC	4 cut(s)	368, 1623, 2026, 2651
GsuI	CTGGAG	4 cut(s)	1113, 1692, 1976, 2894
HaeII	RGCGCY	2 cut(s)	145, 2836
HaeIII	GGCC	8 cut(s)	1179, 1387, 1664, 1912, 2030, 2531, 2798, 2939
HapII	CCGG	5 cut(s)	1930, 2031, 2190, 2610, 2848
HhaI	GCGC	3 cut(s)	144, 2664, 2835
Hin6I	GCGC	3 cut(s)	142, 2662, 2833
HinP1I	GCGC	3 cut(s)	142, 2662, 2833
HincII	GTYRAC	1 cut(s)	271
HindII	GTYRAC	1 cut(s)	271
HindIII	AAGCTT	2 cut(s)	253, 2149
HinfI	GANTC	9 cut(s)	275, 341, 518, 1170, 1297, 1763, 2003, 2104, 2411
HpaII	CCGG	5 cut(s)	1930, 2031, 2190, 2610, 2848
HphI	GGTGA	3 cut(s)	380, 2204, 2339
Hpy166II	GTNNAC	7 cut(s)	87, 271, 1846, 1943, 2421, 2680, 2889
Hpy8I	GTNNAC	7 cut(s)	87, 271, 1846, 1943, 2421, 2680, 2889
HpyAV	CCTTC	6 cut(s)	304, 413, 838, 1240, 2189, 2827
HpyCH4III	ACNGT	9 cut(s)	692, 1261, 1423, 1429, 1813, 1855, 2094, 2308, 2901
HpyCH4IV	ACGT	3 cut(s)	2047, 2604, 2910
HpySE526I	ACGT	3 cut(s)	2047, 2604, 2910
HspAI	GCGC	3 cut(s)	142, 2662, 2833
KflI	GGGWCCC	1 cut(s)	1623
KpnI	GGTACC	1 cut(s)	1700
Ksp22I	TGATCA	2 cut(s)	1270, 2344
LmnI	GCTCC	5 cut(s)	219, 1073, 1442, 1777, 1932
Lsp1109I	GCAGC	9 cut(s)	274, 998, 1169, 1546, 1726, 1767, 2281, 2489, 2498
LweI	GCATC	9 cut(s)	707, 1133, 1135, 1348, 1561, 1652, 2046, 2224, 2757
MaeI	CTAG	4 cut(s)	204, 549, 791, 2273
MaeII	ACGT	3 cut(s)	2047, 2604, 2910
MaeIII	GTNAC	5 cut(s)	462, 1213, 1423, 1537, 1864
MfeI	CAATTG	2 cut(s)	381, 1629
MflI	RGATCY	5 cut(s)	454, 823, 1033, 1504, 2227
MhlI	GDGCHC	4 cut(s)	1945, 2127, 2327, 2371
MlsI	TGGCCA	1 cut(s)	1179
MluNI	TGGCCA	1 cut(s)	1179
MlyI	GAGTC	4 cut(s)	335, 1179, 1306, 1757
MmeI	TCCRAC	1 cut(s)	2104
Mox20I	TGGCCA	1 cut(s)	1179
MroXI	GAANNNNTTC	1 cut(s)	1100
MscI	TGGCCA	1 cut(s)	1179
MseI	TTAA	9 cut(s)	494, 575, 923, 981, 1065, 1722, 2147, 2639, 2944
MslI	CAYNNNNRTG	3 cut(s)	1403, 1742, 2459
Msp20I	TGGCCA	1 cut(s)	1179
MspA1I	CMGCKG	2 cut(s)	2022, 2872
MspCI	CTTAAG	3 cut(s)	980, 2146, 2638
MspI	CCGG	5 cut(s)	1930, 2031, 2190, 2610, 2848
MspR9I	CCNGG	8 cut(s)	412, 1710, 1931, 2190, 2362, 2505, 2610, 2848
MunI	CAATTG	2 cut(s)	381, 1629
Mva1269I	GAATGC	2 cut(s)	183, 2651
MvaI	CCWGG	4 cut(s)	412, 1710, 2362, 2505
NciI	CCSGG	4 cut(s)	1931, 2190, 2610, 2848
NcoI	CCATGG	1 cut(s)	1368
NheI	GCTAGC	1 cut(s)	2272
NlaIV	GGNNCC	8 cut(s)	825, 935, 1366, 1490, 1624, 1625, 1698, 2633
NmuCI	GTSAC	2 cut(s)	1213, 1423
NsbI	TGCGCA	1 cut(s)	2663
NspI	RCATGY	2 cut(s)	168, 1221
PaeI	GCATGC	1 cut(s)	168
PaeR7I	CTCGAG	1 cut(s)	1019
PagI	TCATGA	1 cut(s)	1801
PasI	CCCWGGG	1 cut(s)	411
PciI	ACATGT	1 cut(s)	1217
PcsI	WCGNNNNNNNCGW	1 cut(s)	907
PctI	GAATGC	2 cut(s)	183, 2651
PdmI	GAANNNNTTC	1 cut(s)	1100
PfeI	GAWTC	5 cut(s)	275, 518, 2003, 2104, 2411
PleI	GAGTC	4 cut(s)	335, 1178, 1305, 1757
PpsI	GAGTC	4 cut(s)	335, 1178, 1305, 1757
Ppu21I	YACGTR	1 cut(s)	2048
PpuMI	RGGWCCY	1 cut(s)	1623
PscI	ACATGT	1 cut(s)	1217
PsiI	TTATAA	1 cut(s)	1653
Psp5II	RGGWCCY	1 cut(s)	1623
Psp6I	CCWGG	4 cut(s)	410, 1708, 2360, 2503
PspFI	CCCAGC	4 cut(s)	364, 1619, 2022, 2647
PspGI	CCWGG	4 cut(s)	410, 1708, 2360, 2503
PspN4I	GGNNCC	8 cut(s)	825, 935, 1366, 1490, 1624, 1625, 1698, 2633
PspPI	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
PspPPI	RGGWCCY	1 cut(s)	1623
PstNI	CAGNNNCTG	2 cut(s)	1136, 2231
PsuI	RGATCY	5 cut(s)	454, 823, 1033, 1504, 2227
PvuII	CAGCTG	1 cut(s)	2872
RseI	CAYNNNNRTG	3 cut(s)	1403, 1742, 2459
SaqAI	TTAA	9 cut(s)	494, 575, 923, 981, 1065, 1722, 2147, 2639, 2944
Sau96I	GGNCC	5 cut(s)	688, 933, 1364, 1623, 1663
SchI	GAGTC	4 cut(s)	335, 1179, 1306, 1757
ScrFI	CCNGG	8 cut(s)	412, 1710, 1931, 2190, 2362, 2505, 2610, 2848
SduI	GDGCHC	4 cut(s)	1945, 2127, 2327, 2371
SfaNI	GCATC	9 cut(s)	707, 1133, 1135, 1348, 1561, 1652, 2046, 2224, 2757
SfcI	CTRYAG	2 cut(s)	1936, 2539
Sfr274I	CTCGAG	1 cut(s)	1019
SinI	GGWCC	4 cut(s)	688, 933, 1364, 1623
SlaI	CTCGAG	1 cut(s)	1019
SmiMI	CAYNNNNRTG	3 cut(s)	1403, 1742, 2459
SmlI	CTYRAG	9 cut(s)	169, 458, 872, 942, 980, 1019, 2146, 2638, 2821
SmoI	CTYRAG	9 cut(s)	169, 458, 872, 942, 980, 1019, 2146, 2638, 2821
SphI	GCATGC	1 cut(s)	168
SsiI	CCGC	7 cut(s)	721, 1312, 1384, 2020, 2629, 2803, 2940
SspI	AATATT	2 cut(s)	303, 2380
SspMI	CTAG	4 cut(s)	204, 549, 791, 2273
StyD4I	CCNGG	8 cut(s)	410, 1708, 1929, 2188, 2360, 2503, 2608, 2846
StyI	CCWWGG	3 cut(s)	203, 1368, 2862
TaaI	ACNGT	9 cut(s)	692, 1261, 1423, 1429, 1813, 1855, 2094, 2308, 2901
TaiI	ACGT	3 cut(s)	2050, 2607, 2913
TaqI	TCGA	6 cut(s)	910, 1020, 1761, 2061, 2406, 2655
TatI	WGTACW	3 cut(s)	1461, 2442, 2679
TauI	GCSGC	3 cut(s)	723, 1387, 2942
TfiI	GAWTC	5 cut(s)	275, 518, 2003, 2104, 2411
Tru1I	TTAA	9 cut(s)	494, 575, 923, 981, 1065, 1722, 2147, 2639, 2944
Tru9I	TTAA	9 cut(s)	494, 575, 923, 981, 1065, 1722, 2147, 2639, 2944
TscAI	CASTG	6 cut(s)	89, 653, 756, 1428, 1818, 2691
TseFI	GTSAC	2 cut(s)	1213, 1423
TseI	GCWGC	9 cut(s)	287, 986, 1157, 1559, 1714, 1780, 2269, 2477, 2486
Tsp45I	GTSAC	2 cut(s)	1213, 1423
TspDTI	ATGAA	9 cut(s)	1007, 1272, 1449, 1726, 1787, 2025, 2231, 2295, 2856
TspGWI	ACGGA	3 cut(s)	391, 1256, 1985
TspRI	CASTG	6 cut(s)	89, 653, 756, 1428, 1818, 2691
Vha464I	CTTAAG	3 cut(s)	980, 2146, 2638
VneI	GTGCAC	1 cut(s)	1941
VpaK11BI	GGWCC	4 cut(s)	688, 933, 1364, 1623
XagI	CCTNNNNNAGG	3 cut(s)	1247, 2821, 2861
XapI	RAATTY	8 cut(s)	112, 355, 570, 634, 1277, 2012, 2162, 2716
XceI	RCATGY	2 cut(s)	168, 1221
XcmI	CCANNNNNNNNNTGG	4 cut(s)	1117, 1199, 2729, 2869
XhoI	CTCGAG	1 cut(s)	1019
XmaJI	CCTAGG	1 cut(s)	203
XmiI	GTMKAC	2 cut(s)	1845, 2888
XmnI	GAANNNNTTC	1 cut(s)	1100
XspI	CTAG	4 cut(s)	204, 549, 791, 2273

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.