pycom14g12870

SUMO-activating enzyme subunit

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr14
Physical Location & Seq
Reverse (-)
15907586 .. 15909674
2089 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 618 bp
ATGGTTCGTGTTTCTGTAGAAAAAGGTGATTTAGCAAGCTTTGGGGCAGAGTTCTATAGCAAATTTGATGTCGTCGTTGTCAGCTGTTGCTCCTTCACAACTAAAGTACTACGCATGCCCATCCCCTTGATAGACTCCTGTGGTGAAATATTTGTTGATCTGCAACACCATAAATATTCGAAAATAAAAAACGAGGAAACAATCGAATGTGAACTACAGTATCCAAGCTTTGAGGAATCAATTTCAGTAACTTGGAAATCATTTCCCAGGAGATTCTCAAAGCTATACTTTGCTATGCGAGTAATAGAAAGGTTTGAAGAAGCCGAGCAACGTAAACCTGGAGAGTTATCAATTGCAGATCTTCCTGCTGTTCTGAAGTTGAAAAAAGAACTCTGTGAAGCACAGTCAGTGAATGAGTCTCATATTCCAAATGCGCTCCTGGAAAGATTGGTGACAGATACAAGAGAGTTTCCTCCAGTTTGCCCCATCATTGGAGGGATTCTTGGGCAGGAGGTTATTAAGACAATATCAGAGAAAGGAGACCCTGTCAAGAATTTCTTCTTCTTCGATGCTATGGATGGAAAGGGTGTAATCGAGGACATATCAGGGAACCCTTGA

Protein Analysis

206

Amino Acids

23.19

Weight (kDa)

5.15

Isoelectric Point (pI)

48.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 62, 553
AcuI CTGAAG 1 cut(s) 395
AfaI GTAC 1 cut(s) 108
AfiI CCNNNNNNNGG 1 cut(s) 491
AgsI TTSAA 2 cut(s) 317, 382
AjnI CCWGG 3 cut(s) 266, 337, 438
AluBI AGCT 4 cut(s) 39, 84, 228, 283
AluI AGCT 4 cut(s) 39, 84, 228, 283
Alw26I GTCTC 2 cut(s) 423, 534
ApoI RAATTY 2 cut(s) 62, 553
ArsI GACNNNNNNTTYG 2 cut(s) 54, 86
Asp700I GAANNNNTTC 1 cut(s) 557
AspLEI GCGC 1 cut(s) 436
AsuHPI GGTGA 3 cut(s) 38, 155, 463
AsuII TTCGAA 1 cut(s) 179
BaeI ACNNNNGTAYC 2 cut(s) 203, 236
BccI CCATC 3 cut(s) 128, 494, 572
BciT130I CCWGG 3 cut(s) 268, 339, 440
BciVI GTATCC 1 cut(s) 231
BcoDI GTCTC 2 cut(s) 423, 534
BfmI CTRYAG 3 cut(s) 15, 55, 215
BfuI GTATCC 1 cut(s) 231
BglII AGATCT 1 cut(s) 358
BmcAI AGTACT 1 cut(s) 108
Bme1390I CCNGG 3 cut(s) 268, 339, 440
BmiI GGNNCC 1 cut(s) 611
BmrFI CCNGG 3 cut(s) 268, 339, 440
BmsI GCATC 1 cut(s) 559
BpmI CTGGAG 2 cut(s) 360, 459
Bpu14I TTCGAA 1 cut(s) 179
BsaI GGTCTC 1 cut(s) 534
BsaJI CCNNGG 1 cut(s) 266
BsaXI ACNNNNNCTCC 2 cut(s) 531, 561
Bsc4I CCNNNNNNNGG 1 cut(s) 491
Bse1I ACTGG 1 cut(s) 476
BseBI CCWGG 3 cut(s) 268, 339, 440
BseDI CCNNGG 1 cut(s) 266
BseGI GGATG 2 cut(s) 120, 583
BseLI CCNNNNNNNGG 1 cut(s) 491
BseNI ACTGG 1 cut(s) 476
BslI CCNNNNNNNGG 1 cut(s) 491
BsmAI GTCTC 2 cut(s) 423, 534
Bso31I GGTCTC 1 cut(s) 534
Bsp119I TTCGAA 1 cut(s) 179
Bsp143I GATC 2 cut(s) 157, 358
BspLI GGNNCC 1 cut(s) 611
BspT104I TTCGAA 1 cut(s) 179
BspTNI GGTCTC 1 cut(s) 534
BsrI ACTGG 1 cut(s) 476
BssECI CCNNGG 1 cut(s) 266
BssMI GATC 2 cut(s) 157, 358
Bst2UI CCWGG 3 cut(s) 268, 339, 440
Bst4CI ACNGT 2 cut(s) 219, 405
BstBI TTCGAA 1 cut(s) 179
BstC8I GCNNGC 2 cut(s) 37, 116
BstF5I GGATG 2 cut(s) 120, 583
BstHHI GCGC 1 cut(s) 436
BstKTI GATC 2 cut(s) 160, 361
BstMAI GTCTC 2 cut(s) 423, 534
BstMBI GATC 2 cut(s) 157, 358
BstNI CCWGG 3 cut(s) 268, 339, 440
BstNSI RCATGY 1 cut(s) 118
BstSCI CCNGG 3 cut(s) 266, 337, 438
BstSFI CTRYAG 3 cut(s) 15, 55, 215
BstX2I RGATCY 1 cut(s) 358
BstYI RGATCY 1 cut(s) 358
BsuI GTATCC 1 cut(s) 231
BtsCI GGATG 2 cut(s) 120, 583
BtsIMutI CAGTG 1 cut(s) 414
Cac8I GCNNGC 2 cut(s) 37, 116
CfoI GCGC 1 cut(s) 436
Csp6I GTAC 1 cut(s) 107
CviAII CATG 1 cut(s) 115
CviJI RGCY 5 cut(s) 39, 84, 228, 283, 323
CviKI_1 RGCY 5 cut(s) 39, 84, 228, 283, 323
CviQI GTAC 1 cut(s) 107
DpnI GATC 2 cut(s) 159, 360
DpnII GATC 2 cut(s) 157, 358
Eco31I GGTCTC 1 cut(s) 534
Eco57I CTGAAG 1 cut(s) 395
EcoRII CCWGG 3 cut(s) 266, 337, 438
FaeI CATG 1 cut(s) 118
FaiI YATR 8 cut(s) 57, 116, 171, 286, 296, 423, 575, 602
FalI AAGNNNNNCTT 4 cut(s) 272, 304, 542, 574
FatI CATG 1 cut(s) 114
FokI GGATG 2 cut(s) 107, 590
GlaI GCGC 1 cut(s) 435
GsuI CTGGAG 2 cut(s) 360, 459
HhaI GCGC 1 cut(s) 436
Hin1II CATG 1 cut(s) 118
Hin6I GCGC 1 cut(s) 434
HinP1I GCGC 1 cut(s) 434
HindIII AAGCTT 2 cut(s) 37, 226
HinfI GANTC 5 cut(s) 134, 236, 273, 416, 499
HphI GGTGA 3 cut(s) 38, 155, 463
Hpy166II GTNNAC 2 cut(s) 212, 335
Hpy188I TCNGA 2 cut(s) 375, 532
Hpy188III TCNNGA 1 cut(s) 550
Hpy8I GTNNAC 2 cut(s) 212, 335
Hpy99I CGWCG 1 cut(s) 77
HpyAV CCTTC 1 cut(s) 103
HpyCH4III ACNGT 2 cut(s) 219, 405
HpyCH4IV ACGT 1 cut(s) 331
HpyCH4V TGCA 2 cut(s) 163, 356
HpySE526I ACGT 1 cut(s) 331
Hsp92II CATG 1 cut(s) 118
HspAI GCGC 1 cut(s) 434
Kzo9I GATC 2 cut(s) 157, 358
LmnI GCTCC 2 cut(s) 95, 441
LweI GCATC 1 cut(s) 559
MaeII ACGT 1 cut(s) 331
MaeIII GTNAC 2 cut(s) 247, 451
MalI GATC 2 cut(s) 159, 360
MboI GATC 2 cut(s) 157, 358
MboII GAAGA 5 cut(s) 329, 353, 550, 553, 556
MfeI CAATTG 1 cut(s) 351
MflI RGATCY 1 cut(s) 358
MluCI AATT 4 cut(s) 62, 240, 351, 553
MlyI GAGTC 2 cut(s) 128, 425
MnlI CCTC 6 cut(s) 187, 226, 483, 488, 505, 589
MroXI GAANNNNTTC 1 cut(s) 557
MseI TTAA 1 cut(s) 519
MspA1I CMGCKG 1 cut(s) 84
MspR9I CCNGG 3 cut(s) 268, 339, 440
MunI CAATTG 1 cut(s) 351
MvaI CCWGG 3 cut(s) 268, 339, 440
NdeII GATC 2 cut(s) 157, 358
NlaIII CATG 1 cut(s) 118
NlaIV GGNNCC 1 cut(s) 611
NmeAIII GCCGAG 1 cut(s) 349
NmuCI GTSAC 1 cut(s) 451
NspI RCATGY 1 cut(s) 118
NspV TTCGAA 1 cut(s) 179
PaeI GCATGC 1 cut(s) 118
PdmI GAANNNNTTC 1 cut(s) 557
PfeI GAWTC 3 cut(s) 236, 273, 499
PflFI GACNNNGTC 1 cut(s) 545
PfoI TCCNGGA 1 cut(s) 438
PleI GAGTC 2 cut(s) 128, 424
PpsI GAGTC 2 cut(s) 128, 424
Psp6I CCWGG 3 cut(s) 266, 337, 438
PspGI CCWGG 3 cut(s) 266, 337, 438
PspN4I GGNNCC 1 cut(s) 611
PsuI RGATCY 1 cut(s) 358
PsyI GACNNNGTC 1 cut(s) 545
PvuII CAGCTG 1 cut(s) 84
RsaI GTAC 1 cut(s) 108
RsaNI GTAC 1 cut(s) 107
SaqAI TTAA 1 cut(s) 519
Sau3AI GATC 2 cut(s) 157, 358
ScaI AGTACT 1 cut(s) 108
SchI GAGTC 2 cut(s) 128, 425
ScrFI CCNGG 3 cut(s) 268, 339, 440
SetI ASST 9 cut(s) 28, 41, 86, 230, 285, 314, 334, 340, 516
SfaNI GCATC 1 cut(s) 559
SfcI CTRYAG 3 cut(s) 15, 55, 215
SfuI TTCGAA 1 cut(s) 179
SphI GCATGC 1 cut(s) 118
Sse9I AATT 4 cut(s) 62, 240, 351, 553
SspI AATATT 2 cut(s) 150, 176
StyD4I CCNGG 3 cut(s) 266, 337, 438
TaaI ACNGT 2 cut(s) 219, 405
TaiI ACGT 1 cut(s) 334
TaqI TCGA 4 cut(s) 179, 204, 567, 594
TasI AATT 4 cut(s) 62, 240, 351, 553
TatI WGTACW 1 cut(s) 106
TfiI GAWTC 3 cut(s) 236, 273, 499
Tru1I TTAA 1 cut(s) 519
Tru9I TTAA 1 cut(s) 519
TscAI CASTG 1 cut(s) 414
TseFI GTSAC 1 cut(s) 451
Tsp45I GTSAC 1 cut(s) 451
TspRI CASTG 1 cut(s) 414
Tth111I GACNNNGTC 1 cut(s) 545
XapI RAATTY 2 cut(s) 62, 553
XceI RCATGY 1 cut(s) 118
XmnI GAANNNNTTC 1 cut(s) 557
ZrmI AGTACT 1 cut(s) 108
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.