Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr14

Orthogroup ID

OG0007181

Physical Location & Seq

Genomic Coordinates Reverse (-)

17058693 .. 17061127

Gene Structure 2435 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1734 bp

ATGCCCAGGTTCAGACCGAAGGAGATTCAGGCAAGCAGAGCGGTGCCTCTGGGAGTCACGTGGCTCCATCAGCTGCTGGTAATTCAAATCGATCTGAAGGGTGATGGCAAGTCAAAACCCATCTTAAAGTCTGCAGCCGAGGAATCAAGCACCAAAAAAGGTCAGGCGACGGATTCTGTGAATGTGACCAAGGATGTGGGGATGTCTGATCCACCTCTTCATGCAACTGTTGATCTCAATTTCCTTCCTACTGATTCTTATCTATCAGGATCCACGCCTGTAAATGGTGCACCAGCTGGATCAAGTTTTCACACCAGTGATGCAAGGAAGGAGTCTAAGGAGCTTCCCAATGGTCTTCTCAATATTCAAAAGAAACTTCACAACAAGAAGCCTTTTGGTTGTGGGACTCCTATTGCAAATGACTCAGCTACTCCTGCTGCCTCTCGGCGTATTCCTTTCAAAAGAATTCACTCCAAAGCGATGGGTGGTATGTTCCACACAGGTGTTCACTGTGATGGCTGTGATTGTCATCCAATTGTTGGACCTCGATTCAAGTCAATAGTGAAAGAAAATTATGACCTCTGTCAGATTTGTTTTGCAAGTAAGGGTAGTGCGACTGATTACATTAGGATTGACCAACCTATCTCTTATCGTCATCCACAGCCCTTCAAGGGGTTGTTTGAGCAACCTCCATGGGTCGGCCCCCCAGTTATGCCAAAAATCTTGAGAGGTTTAAGTATGAACCCAGGCCACCCTAAGCTTGATAGCCACTTTGTATTGGATGTCAATGTAATGGATGGTACATTAATAGCCCCATCTACTCCATTTACCAAAATATGGCGGATGCGCAACAATGGTAGTATGGTGTGGCCTCAAGGAACAACACTTGTGTGGATTGGAGGTGACAGATTTAGCAATTCAGATTCAGTCGAGATAGAGATTCCTGCGGATGGTGTGCCAGCTGAAAATGAACTCGATATTGCTGTTGATTTTACCGCGCCCGATTCACCTGGTCGCTACATCTCACACTGGAGGATGGCAACCCCGTCTGGCCAAAAGTTTGGTCAACGTGTTTGGGTTCTGATCCAGGTTGATGCTTCCTTGAAGGATTCATTCTTTGAGAGCTTTCAAGGTCTGAACTTGAATTTACCCCCAAAAGAATATGAAAAAATGGATGTGAACGTTCAACCAGCTGCTGTCAGTGACTTTCTCCAGCCTTCTGCTTCTACCCCACTCAAGGAACCAGTGAAGCCCGTGCCTACTGAACAGCCTGGACATGACCAGGAGCTCCACTTCCCCATCAACGATAGCTTGCTGGTTGGCCACAGCCCCTCTGCCCCTACTGAGCCACAGGGTCCTTCAACTGTGTCGTACCCCACTGTTGAGCCACAGGGTCCTTCAACTGTGTTATATCCCACCTTTGACCCACAGGGTTCGACTGTGTCGTATCCCATGGTTGATATCTATGAATCAGCCCCGCCCTCCCCCAAATCACCACCTGTTGTCAATGCACTGGCATCATCTGAAGGGACCAGTTCAAACAATGCTGTGGAAGATACCATGCTGAAGGAGCTCGAGGCGATGGGGTTTAAGCAGGTCAATTTGAACAAGGAGATTCTGCGTAGGAACAACTACAACCTGGAGCAGTCTGTTGAAGATCGATCTGCGAGGTTTTGGACTGGGATCCTATCCTTGAGGAGCTGCAGGAAATGGGTTTCTGTGATACCGAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005770 GO:0005773 GO:0005829 GO:0006914 GO:0008150 GO:0008152 GO:0009056 GO:0009987 GO:0012505 GO:0016043 GO:0016236 GO:0022607 GO:0031410 GO:0031982 GO:0032182 GO:0034622 GO:0043130 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044237 GO:0044248 GO:0044424 GO:0044444 GO:0044464 GO:0051258 GO:0051259 GO:0061919 GO:0065003 GO:0071840 GO:0097708

KEGG Pathways

Metabolic & Signaling

ko04137 map04137

Pfam Domains

Protein Families

N_BRCA1_IG PB1 ZZ

Protein Analysis

578

Amino Acids

63.24

Weight (kDa)

6.74

Isoelectric Point (pI)

47.95

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ZZ	PF00569	166 - 202	2.4e-09	Zinc finger, ZZ type
N_BRCA1_IG	PF16158	263 - 364	3.4e-34	Ig-like domain from next to BRCA1 gene
UBA_NBR1_C	PF24932	518 - 553	1.5e-19	Next to BRCA1 gene 1 protein-like, C-terminal UBA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007181)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G24690
fragaria_vesca	FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270 FvH4_5g06270
malus_domestica	MD06G1165900.v1.1 MD14G1171800.v1.1
prunus_persica	Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1 Prupe.5G165800_v2.0.a1
pyrus_communis	pycom06g14840 pycom14g14340
rosa_chinensis	RchiOBHm_Chr7g0192591
rosa_laevigata	RLG00000004349
rosa_multiflora	Rmu_sc0003108.1_g000043
rosa_roxburghii	Rroxscaffold_3G00262920
rosa_rugosa	Rorug07G0002500
rosa_samantha	Rh7AG126900 Rh7BG129200 Rh7CG131000 Rh7DG130300
rosa_wichuraiana	Rw7G010910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	848
Acc36I	ACCTGC	1 cut(s)	1585
AccB1I	GGYRCC	1 cut(s)	43
AccB7I	CCANNNNNTGG	2 cut(s)	539, 837
AccBSI	CCGCTC	1 cut(s)	41
AccII	CGCG	1 cut(s)	998
AciI	CCGC	5 cut(s)	41, 841, 947, 996, 1478
AclI	AACGTT	1 cut(s)	1182
AclWI	GGATC	7 cut(s)	203, 264, 277, 307, 1078, 1678, 1691
AcoI	YGGCCR	2 cut(s)	1051, 1321
AcsI	RAATTY	2 cut(s)	465, 1144
AcuI	CTGAAG	3 cut(s)	116, 1545, 1586
AcvI	CACGTG	1 cut(s)	60
AfaI	GTAC	2 cut(s)	802, 1373
AfiI	CCNNNNNNNGG	8 cut(s)	284, 539, 671, 672, 698, 837, 950, 1237
AflIII	ACRYGT	1 cut(s)	1069
AjnI	CCWGG	7 cut(s)	5, 745, 1009, 1086, 1270, 1281, 1638
AleI	CACNNNNGTG	3 cut(s)	315, 501, 889
Alw21I	GWGCWC	3 cut(s)	292, 1290, 1575
Alw44I	GTGCAC	1 cut(s)	288
AlwI	GGATC	7 cut(s)	203, 264, 277, 307, 1078, 1678, 1691
AlwNI	CAGNNNCTG	2 cut(s)	76, 1196
Ama87I	CYCGRG	1 cut(s)	1574
AoxI	GGCC	5 cut(s)	700, 748, 869, 1051, 1321
ApaLI	GTGCAC	1 cut(s)	288
ApeKI	GCWGC	5 cut(s)	73, 134, 437, 1193, 1701
ApoI	RAATTY	2 cut(s)	465, 1144
ArsI	GACNNNNNNTTYG	2 cut(s)	1048, 1080
AseI	ATTAAT	1 cut(s)	806
AspLEI	GCGC	2 cut(s)	849, 1000
AspS9I	GGNCC	5 cut(s)	542, 701, 1355, 1394, 1530
AsuHPI	GGTGA	4 cut(s)	113, 914, 999, 1485
AvaI	CYCGRG	1 cut(s)	1574
AvaII	GGWCC	4 cut(s)	542, 1355, 1394, 1530
BaeGI	GKGCMC	1 cut(s)	292
BalI	TGGCCA	2 cut(s)	1053, 1323
BamHI	GGATCC	2 cut(s)	269, 1683
BanI	GGYRCC	1 cut(s)	43
BanII	GRGCYC	2 cut(s)	1290, 1575
BbrPI	CACGTG	1 cut(s)	60
BbsI	GAAGAC	1 cut(s)	347
Bbv12I	GWGCWC	3 cut(s)	292, 1290, 1575
BbvI	GCAGC	5 cut(s)	60, 146, 424, 1180, 1688
BciT130I	CCWGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
BciVI	GTATCC	1 cut(s)	1458
BfmI	CTRYAG	2 cut(s)	132, 1702
BfuAI	ACCTGC	1 cut(s)	1585
BfuI	GTATCC	1 cut(s)	1458
BisI	GCNGC	5 cut(s)	74, 135, 438, 1194, 1702
BlsI	GCNGC	5 cut(s)	75, 136, 439, 1195, 1703
Bme1390I	CCNGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
Bme18I	GGWCC	4 cut(s)	542, 1355, 1394, 1530
BmeT110I	CYCGRG	1 cut(s)	1574
BmgT120I	GGNCC	5 cut(s)	542, 701, 1355, 1394, 1530
BmiI	GGNNCC	9 cut(s)	45, 65, 271, 703, 1242, 1356, 1395, 1531, 1685
BmrFI	CCNGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
BmrI	ACTGGG	2 cut(s)	701, 1689
BmsI	GCATC	4 cut(s)	310, 834, 1084, 1526
BmuI	ACTGGG	2 cut(s)	701, 1689
BoxI	GACNNNNGTC	1 cut(s)	582
BpiI	GAAGAC	1 cut(s)	347
BpmI	CTGGAG	3 cut(s)	1051, 1196, 1661
Bpu10I	CCTNAGC	1 cut(s)	756
BpuEI	CTTGAG	4 cut(s)	745, 858, 1220, 1714
Bsa29I	ATCGAT	2 cut(s)	90, 1660
BsaAI	YACGTR	1 cut(s)	60
BsaBI	GATNNNNATC	2 cut(s)	258, 528
BsaJI	CCNNGG	6 cut(s)	5, 138, 189, 692, 745, 1452
Bsc4I	CCNNNNNNNGG	8 cut(s)	284, 539, 671, 672, 698, 837, 950, 1237
Bse1I	ACTGG	7 cut(s)	315, 707, 1034, 1244, 1518, 1533, 1684
Bse8I	GATNNNNATC	2 cut(s)	258, 528
BseBI	CCWGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
BseCI	ATCGAT	2 cut(s)	90, 1660
BseDI	CCNNGG	6 cut(s)	5, 138, 189, 692, 745, 1452
BseJI	GATNNNNATC	2 cut(s)	258, 528
BseLI	CCNNNNNNNGG	8 cut(s)	284, 539, 671, 672, 698, 837, 950, 1237
BseMII	CTCAG	2 cut(s)	438, 1335
BseNI	ACTGG	7 cut(s)	315, 707, 1034, 1244, 1518, 1533, 1684
BseRI	GAGGAG	1 cut(s)	1711
BseSI	GKGCMC	1 cut(s)	292
BseXI	GCAGC	5 cut(s)	60, 146, 424, 1180, 1688
Bsh1236I	CGCG	1 cut(s)	998
BshFI	GGCC	5 cut(s)	702, 750, 871, 1053, 1323
BshNI	GGYRCC	1 cut(s)	43
BshVI	ATCGAT	2 cut(s)	90, 1660
BsiHKAI	GWGCWC	3 cut(s)	292, 1290, 1575
BsiHKCI	CYCGRG	1 cut(s)	1574
BslFI	GGGAC	2 cut(s)	418, 1543
BslI	CCNNNNNNNGG	8 cut(s)	284, 539, 671, 672, 698, 837, 950, 1237
BsmFI	GGGAC	2 cut(s)	418, 1543
BsnI	GGCC	5 cut(s)	702, 750, 871, 1053, 1323
BsoBI	CYCGRG	1 cut(s)	1574
Bsp1286I	GDGCHC	3 cut(s)	292, 1290, 1575
Bsp143I	GATC	9 cut(s)	91, 208, 232, 269, 299, 1083, 1657, 1661, 1683
Bsp19I	CCATGG	2 cut(s)	692, 1452
BspACI	CCGC	5 cut(s)	41, 841, 947, 996, 1478
BspANI	GGCC	5 cut(s)	702, 750, 871, 1053, 1323
BspCNI	CTCAG	2 cut(s)	437, 1336
BspDI	ATCGAT	2 cut(s)	90, 1660
BspFNI	CGCG	1 cut(s)	998
BspLI	GGNNCC	9 cut(s)	45, 65, 271, 703, 1242, 1356, 1395, 1531, 1685
BspMAI	CTGCAG	2 cut(s)	136, 1706
BspMI	ACCTGC	1 cut(s)	1585
BspPI	GGATC	7 cut(s)	203, 264, 277, 307, 1078, 1678, 1691
BspT107I	GGYRCC	1 cut(s)	43
BsrBI	CCGCTC	1 cut(s)	41
BsrI	ACTGG	7 cut(s)	315, 707, 1034, 1244, 1518, 1533, 1684
BssECI	CCNNGG	6 cut(s)	5, 138, 189, 692, 745, 1452
BssMI	GATC	9 cut(s)	91, 208, 232, 269, 299, 1083, 1657, 1661, 1683
BssT1I	CCWWGG	3 cut(s)	189, 692, 1452
Bst2UI	CCWGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
Bst4CI	ACNGT	6 cut(s)	229, 512, 1366, 1381, 1405, 1441
Bst6I	CTCTTC	1 cut(s)	222
BstBAI	YACGTR	1 cut(s)	60
BstC8I	GCNNGC	3 cut(s)	34, 960, 1313
BstDEI	CTNAG	4 cut(s)	336, 424, 756, 1344
BstDSI	CCRYGG	2 cut(s)	692, 1452
BstFNI	CGCG	1 cut(s)	998
BstHHI	GCGC	2 cut(s)	849, 1000
BstKTI	GATC	9 cut(s)	94, 211, 235, 272, 302, 1086, 1660, 1664, 1686
BstMBI	GATC	9 cut(s)	91, 208, 232, 269, 299, 1083, 1657, 1661, 1683
BstMWI	GCNNNNNNNGC	4 cut(s)	38, 70, 434, 1570
BstNI	CCWGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
BstPAI	GACNNNNGTC	1 cut(s)	582
BstSCI	CCNGG	7 cut(s)	5, 745, 1009, 1086, 1270, 1281, 1638
BstSFI	CTRYAG	2 cut(s)	132, 1702
BstSLI	GKGCMC	1 cut(s)	292
BstUI	CGCG	1 cut(s)	998
BstV1I	GCAGC	5 cut(s)	60, 146, 424, 1180, 1688
BstV2I	GAAGAC	1 cut(s)	347
BstX2I	RGATCY	2 cut(s)	269, 1683
BstXI	CCANNNNNNTGG	3 cut(s)	196, 481, 1061
BstYI	RGATCY	2 cut(s)	269, 1683
Bsu15I	ATCGAT	2 cut(s)	90, 1660
BsuI	GTATCC	1 cut(s)	1458
BsuRI	GGCC	5 cut(s)	702, 750, 871, 1053, 1323
BsuTUI	ATCGAT	2 cut(s)	90, 1660
BtgI	CCRYGG	2 cut(s)	692, 1452
BtgZI	GCGATG	2 cut(s)	494, 1595
BtsIMutI	CAGTG	7 cut(s)	322, 508, 1027, 1207, 1251, 1377, 1511
BveI	ACCTGC	1 cut(s)	1585
Cac8I	GCNNGC	3 cut(s)	34, 960, 1313
CaiI	CAGNNNCTG	2 cut(s)	76, 1196
CfoI	GCGC	2 cut(s)	849, 1000
Cfr13I	GGNCC	5 cut(s)	542, 701, 1355, 1394, 1530
ClaI	ATCGAT	2 cut(s)	90, 1660
CsiI	ACCWGGT	1 cut(s)	1009
Csp6I	GTAC	2 cut(s)	801, 1372
CviAII	CATG	5 cut(s)	221, 693, 1277, 1453, 1561
CviQI	GTAC	2 cut(s)	801, 1372
DdeI	CTNAG	4 cut(s)	336, 424, 756, 1344
DpnI	GATC	9 cut(s)	93, 210, 234, 271, 301, 1085, 1659, 1663, 1685
DpnII	GATC	9 cut(s)	91, 208, 232, 269, 299, 1083, 1657, 1661, 1683
EaeI	YGGCCR	2 cut(s)	1051, 1321
Eam1104I	CTCTTC	1 cut(s)	222
EarI	CTCTTC	1 cut(s)	222
EciI	GGCGGA	1 cut(s)	856
Ecl136II	GAGCTC	2 cut(s)	1288, 1573
Eco130I	CCWWGG	3 cut(s)	189, 692, 1452
Eco24I	GRGCYC	2 cut(s)	1290, 1575
Eco32I	GATATC	1 cut(s)	1462
Eco47I	GGWCC	4 cut(s)	542, 1355, 1394, 1530
Eco53kI	GAGCTC	2 cut(s)	1288, 1573
Eco57I	CTGAAG	3 cut(s)	116, 1545, 1586
Eco72I	CACGTG	1 cut(s)	60
Eco88I	CYCGRG	1 cut(s)	1574
EcoICRI	GAGCTC	2 cut(s)	1288, 1573
EcoO109I	RGGNCCY	2 cut(s)	1355, 1394
EcoRI	GAATTC	1 cut(s)	465
EcoRII	CCWGG	7 cut(s)	5, 745, 1009, 1086, 1270, 1281, 1638
EcoRV	GATATC	1 cut(s)	1462
EcoT14I	CCWWGG	3 cut(s)	189, 692, 1452
EcoT38I	GRGCYC	2 cut(s)	1290, 1575
ErhI	CCWWGG	3 cut(s)	189, 692, 1452
FaeI	CATG	5 cut(s)	224, 696, 1280, 1456, 1564
FaqI	GGGAC	2 cut(s)	418, 1543
FatI	CATG	5 cut(s)	220, 692, 1276, 1452, 1560
FauI	CCCGC	1 cut(s)	1485
Fnu4HI	GCNGC	5 cut(s)	74, 135, 438, 1194, 1702
FriOI	GRGCYC	2 cut(s)	1290, 1575
Fsp4HI	GCNGC	5 cut(s)	74, 135, 438, 1194, 1702
FspI	TGCGCA	1 cut(s)	848
GlaI	GCGC	2 cut(s)	848, 999
GluI	GCNGC	5 cut(s)	74, 135, 438, 1194, 1702
GsuI	CTGGAG	3 cut(s)	1051, 1196, 1661
HaeIII	GGCC	5 cut(s)	702, 750, 871, 1053, 1323
HhaI	GCGC	2 cut(s)	849, 1000
Hin1II	CATG	5 cut(s)	224, 696, 1280, 1456, 1564
Hin6I	GCGC	2 cut(s)	847, 998
HinP1I	GCGC	2 cut(s)	847, 998
HincII	GTYRAC	1 cut(s)	1067
HindII	GTYRAC	1 cut(s)	1067
HindIII	AAGCTT	1 cut(s)	758
HphI	GGTGA	4 cut(s)	113, 914, 999, 1485
Hpy166II	GTNNAC	4 cut(s)	290, 508, 1067, 1180
Hpy188I	TCNGA	8 cut(s)	14, 96, 208, 588, 922, 1083, 1137, 1525
Hpy188III	TCNNGA	3 cut(s)	267, 724, 931
Hpy8I	GTNNAC	4 cut(s)	290, 508, 1067, 1180
Hpy99I	CGWCG	1 cut(s)	172
HpyCH4III	ACNGT	6 cut(s)	229, 512, 1366, 1381, 1405, 1441
HpyCH4IV	ACGT	3 cut(s)	59, 1069, 1182
HpyCH4V	TGCA	8 cut(s)	134, 224, 290, 323, 416, 599, 1511, 1704
HpyF10VI	GCNNNNNNNGC	4 cut(s)	38, 70, 434, 1570
HpyF3I	CTNAG	4 cut(s)	336, 424, 756, 1344
HpySE526I	ACGT	3 cut(s)	59, 1069, 1182
Hsp92II	CATG	5 cut(s)	224, 696, 1280, 1456, 1564
HspAI	GCGC	2 cut(s)	847, 998
Kzo9I	GATC	9 cut(s)	91, 208, 232, 269, 299, 1083, 1657, 1661, 1683
LmnI	GCTCC	7 cut(s)	69, 340, 1285, 1293, 1570, 1642, 1698
Lsp1109I	GCAGC	5 cut(s)	60, 146, 424, 1180, 1688
LweI	GCATC	4 cut(s)	310, 834, 1084, 1526
MabI	ACCWGGT	1 cut(s)	1009
MaeII	ACGT	3 cut(s)	59, 1069, 1182
MaeIII	GTNAC	4 cut(s)	55, 184, 902, 1202
MalI	GATC	9 cut(s)	93, 210, 234, 271, 301, 1085, 1659, 1663, 1685
MbiI	CCGCTC	1 cut(s)	41
MboI	GATC	9 cut(s)	91, 208, 232, 269, 299, 1083, 1657, 1661, 1683
MboII	GAAGA	4 cut(s)	209, 347, 1565, 1667
MfeI	CAATTG	1 cut(s)	534
MflI	RGATCY	2 cut(s)	269, 1683
MhlI	GDGCHC	3 cut(s)	292, 1290, 1575
MlsI	TGGCCA	2 cut(s)	1053, 1323
MluCI	AATT	8 cut(s)	81, 238, 465, 534, 571, 916, 1144, 1600
MluNI	TGGCCA	2 cut(s)	1053, 1323
MlyI	GAGTC	4 cut(s)	63, 341, 400, 416
MmeI	TCCRAC	1 cut(s)	520
Mox20I	TGGCCA	2 cut(s)	1053, 1323
MscI	TGGCCA	2 cut(s)	1053, 1323
MseI	TTAA	4 cut(s)	125, 734, 806, 1590
MslI	CAYNNNNRTG	4 cut(s)	315, 501, 513, 889
Msp20I	TGGCCA	2 cut(s)	1053, 1323
MspA1I	CMGCKG	4 cut(s)	73, 296, 962, 1193
MspR9I	CCNGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
MunI	CAATTG	1 cut(s)	534
MvaI	CCWGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
MvnI	CGCG	1 cut(s)	998
MwoI	GCNNNNNNNGC	4 cut(s)	38, 70, 434, 1570
NcoI	CCATGG	2 cut(s)	692, 1452
NdeII	GATC	9 cut(s)	91, 208, 232, 269, 299, 1083, 1657, 1661, 1683
NlaIII	CATG	5 cut(s)	224, 696, 1280, 1456, 1564
NlaIV	GGNNCC	9 cut(s)	45, 65, 271, 703, 1242, 1356, 1395, 1531, 1685
NmeAIII	GCCGAG	2 cut(s)	163, 424
NmuCI	GTSAC	4 cut(s)	55, 184, 902, 1202
NsbI	TGCGCA	1 cut(s)	848
OliI	CACNNNNGTG	3 cut(s)	315, 501, 889
PaeR7I	CTCGAG	1 cut(s)	1574
PcsI	WCGNNNNNNNCGW	1 cut(s)	1442
PflFI	GACNNNGTC	1 cut(s)	1441
PflMI	CCANNNNNTGG	2 cut(s)	539, 837
PkrI	GCNGC	5 cut(s)	75, 136, 439, 1195, 1703
PleI	GAGTC	4 cut(s)	62, 340, 400, 416
PmaCI	CACGTG	1 cut(s)	60
PmlI	CACGTG	1 cut(s)	60
PpsI	GAGTC	4 cut(s)	62, 340, 400, 416
Ppu21I	YACGTR	1 cut(s)	60
PpuMI	RGGWCCY	2 cut(s)	1355, 1394
PshAI	GACNNNNGTC	1 cut(s)	582
PshBI	ATTAAT	1 cut(s)	806
Psp124BI	GAGCTC	2 cut(s)	1290, 1575
Psp1406I	AACGTT	1 cut(s)	1182
Psp5II	RGGWCCY	2 cut(s)	1355, 1394
Psp6I	CCWGG	7 cut(s)	5, 745, 1009, 1086, 1270, 1281, 1638
PspCI	CACGTG	1 cut(s)	60
PspGI	CCWGG	7 cut(s)	5, 745, 1009, 1086, 1270, 1281, 1638
PspN4I	GGNNCC	9 cut(s)	45, 65, 271, 703, 1242, 1356, 1395, 1531, 1685
PspPI	GGNCC	5 cut(s)	542, 701, 1355, 1394, 1530
PspPPI	RGGWCCY	2 cut(s)	1355, 1394
PspXI	VCTCGAGB	1 cut(s)	1574
PstI	CTGCAG	2 cut(s)	136, 1706
PstNI	CAGNNNCTG	2 cut(s)	76, 1196
PsuI	RGATCY	2 cut(s)	269, 1683
PsyI	GACNNNGTC	1 cut(s)	1441
PvuII	CAGCTG	4 cut(s)	73, 296, 962, 1193
RsaI	GTAC	2 cut(s)	802, 1373
RsaNI	GTAC	2 cut(s)	801, 1372
RseI	CAYNNNNRTG	4 cut(s)	315, 501, 513, 889
SacI	GAGCTC	2 cut(s)	1290, 1575
SaqAI	TTAA	4 cut(s)	125, 734, 806, 1590
SatI	GCNGC	5 cut(s)	74, 135, 438, 1194, 1702
Sau3AI	GATC	9 cut(s)	91, 208, 232, 269, 299, 1083, 1657, 1661, 1683
Sau96I	GGNCC	5 cut(s)	542, 701, 1355, 1394, 1530
SchI	GAGTC	4 cut(s)	63, 341, 400, 416
ScrFI	CCNGG	7 cut(s)	7, 747, 1011, 1088, 1272, 1283, 1640
SduI	GDGCHC	3 cut(s)	292, 1290, 1575
SexAI	ACCWGGT	1 cut(s)	1009
SfaNI	GCATC	4 cut(s)	310, 834, 1084, 1526
SfcI	CTRYAG	2 cut(s)	132, 1702
Sfr274I	CTCGAG	1 cut(s)	1574
SinI	GGWCC	4 cut(s)	542, 1355, 1394, 1530
SlaI	CTCGAG	1 cut(s)	1574
SmiMI	CAYNNNNRTG	4 cut(s)	315, 501, 513, 889
SmlI	CTYRAG	5 cut(s)	724, 873, 1235, 1574, 1693
SmoI	CTYRAG	5 cut(s)	724, 873, 1235, 1574, 1693
Sse9I	AATT	8 cut(s)	81, 238, 465, 534, 571, 916, 1144, 1600
SsiI	CCGC	5 cut(s)	41, 841, 947, 996, 1478
SspI	AATATT	1 cut(s)	364
SstI	GAGCTC	2 cut(s)	1290, 1575
StyD4I	CCNGG	7 cut(s)	5, 745, 1009, 1086, 1270, 1281, 1638
StyI	CCWWGG	3 cut(s)	189, 692, 1452
TaaI	ACNGT	6 cut(s)	229, 512, 1366, 1381, 1405, 1441
TaiI	ACGT	3 cut(s)	62, 1072, 1185
TaqI	TCGA	7 cut(s)	90, 547, 930, 975, 1436, 1575, 1660
TaqII	GACCGA	1 cut(s)	31
TasI	AATT	8 cut(s)	81, 238, 465, 534, 571, 916, 1144, 1600
Tru1I	TTAA	4 cut(s)	125, 734, 806, 1590
Tru9I	TTAA	4 cut(s)	125, 734, 806, 1590
TscAI	CASTG	7 cut(s)	322, 515, 1034, 1207, 1251, 1384, 1518
TseFI	GTSAC	4 cut(s)	55, 184, 902, 1202
TseI	GCWGC	5 cut(s)	73, 134, 437, 1193, 1701
Tsp45I	GTSAC	4 cut(s)	55, 184, 902, 1202
TspDTI	ATGAA	6 cut(s)	209, 755, 984, 1101, 1179, 1482
TspGWI	ACGGA	1 cut(s)	185
TspRI	CASTG	7 cut(s)	322, 515, 1034, 1207, 1251, 1384, 1518
Tth111I	GACNNNGTC	1 cut(s)	1441
Van91I	CCANNNNNTGG	2 cut(s)	539, 837
VneI	GTGCAC	1 cut(s)	288
VpaK11BI	GGWCC	4 cut(s)	542, 1355, 1394, 1530
VspI	ATTAAT	1 cut(s)	806
XapI	RAATTY	2 cut(s)	465, 1144
XhoI	CTCGAG	1 cut(s)	1574

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.