pycom15g03610

BEST Arabidopsis thaliana protein match is

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005705
Physical Location & Seq
Forward (+)
2195664 .. 2202893
7230 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3387 bp
ATGTATGTGATGTTAGTGACCCACATCAAAACGAGGTATGTATATGTGTTAGTGGCCCATCAATTTATTCATTGGTTTTCTGTACGTTTCAAATTTCAGTGGGGCACAATTAAAAAAAAAAGAAAATTCATCGATTTCAAAAATTTAGTCACGCCAGGTGGTCCCCACAGGAAAGATCCAAAGGCGGATTTGAAATCCGAAATTGAACTCGAATTCACAATCCCGCGGATTCCGAGCGCTGCTCCGTTGGATTCTCTTTTAAAAGCGCACAAAATGAATACTCGAGATGTGAGAGCGAGCGAAAATATAAAATACCAGAGCGATCCATCGATTGACAAATTATTATTATTTTTATTTGCAAAAATAAAATCCAGCAACTCTCTCTCTCTCTCTCACTCACTTTCTCTCTCCAAAAAGAAAACCCTAACTTTCTCTCTCCAAACATTTTTTTTTTTCCGCTTTCTCTCTCTTGGATTCGTGTGGCTCTGGGCCTTCAATGGTGTGAGATTAGGGCTAGACCTGCGAGATTGTCAAGGATCTAGAGCAAAGAAACAGGAGAGGGGAGGAACAATGGCGTCGGCAGAGAAAGAACTCGAAGCACAGCTTACGGAAGCTGGGAATCAGCTCTTGGAACCTCCGTCTTCCGTCCCTGACCTCCTTGATGTTCTCGACAGAGTTGAGAATTTTCTATCGAAGGTAGAACAATCACCTACAAAGTCAATGCAAACTGCACTTTCCCCATCACAGAATGCATTGGTTGCTGAGGAACTTTTTAGGCATTCAAATCCTGATGTCAAAGTTGGAGTTGCAGCTTGCATCAGTGAGATAACAAGAATAACTGCACCTGATGCACCTTATGATGATGAACAAATGAAGGAAGTCTTTCATCTTATTGTATCATCCTTTGAAAATCTACATGACAAGTCGAGCCGATCATACGCAAAGAGGGCTTCCATTCTTGAAACTGTTGCGAAGGTCAGATCGTGTGTGGTGATGTTGGACCTTGAATGTGATGCATTGATCGTTGAAATGTTTCAACATTTTCTTAAGGCGATAAGGGATTATCACCCAGAGAACGTTTTTTCATCCATGGAGACTATTATGACTCTTGTTTTAGAAGAAAGTGAAGAAGTATCTGCTGAGCTACTATCTACCTTATTAGCTAGTGTGAAAAACGACAATGAGGACATTCTACCAATTGGACGGAAGCTGGGGGAGAGAGTACTTGAAAGCTGTGCTACTAAACTTAAGGATTACCTGATAGATGAAGTAAAAAGCTTGGGCATTGTTTTTAATGATTATAGTAAAGTTCTAGCATCAATATGCCAAAAGGCAGGTGACGATGCTGAGCAGAATGAAGGCCGTGATGCTGAGCAGAATGAAGTCCGTGATTCTGATGAAAATGTGGCTGCCGAGGAGAAGTCAGCAATTAGGGAATCTTCCAATGAGGCGGCCCAGGTAGATAAAGAAAAGGCAGAAGCACCAATTTCTCCTGAACGAGTTGATCCAGCTGTTGACAGATCTTCAAAGTTAGTTGTGAACAATGGTAATGCAGAGACTGGAGAAGATGACTCTGTTGCTGAGTCAAATGCCTTGAAGAAGGAAGAGGAGGGCAACGATACTGAGGATCAGAAAGATCCAAATGCATCAAGCAATGCTGAACCTGATAGTTTGGAGACTGAGAAAGCTGCAGAGCAAATTCCAGAAATATCTACCAAAGAAAGAGCTGGGAATTCTGATTTGTCAACAAAATCAACACAACCTTCAGACAATTGTCAAGCCGATAATGAGGAAGATACTGAGATACAGCCAGAACATAAGCGTGAAACAGAAGATATTCCCAGCTCACCTCGTGAGGATCCTTCTGTGGAGGCAGCTGTGCAATCGAAAAATGAGAAAGTATCTGATGTTAACATCTCTTCCAAGCCATTTGAAAAGGAACCTGCTGCTGTTGCCTCTCCATCTCCAAGTGAGAGCCTTCCTGGTGAAAGTCTCTCCAAAAAGGCTGGACGGAATAAGAAGAAAGATAGTTCTAATAAAGGAGCAGCACCATTGGCAGATGATGAACCCAAAAAGGTAACTGACGGAACCAGTGATTCAGAATTAAAACCAAGTAGACGCTCTGGGAAAAAGGCGTCTGCTGGATTTTCTAATGAGAATAAAAGTCCAATTGTGGTGGAGGCATCTAGAAAGGAAAGTGGCACCACAAGTGATTCTGAAGCAAAACAGAAGTCAGTGAAGAAGGTAGATGGGAACACTAAAACTAGCGGTGGGTCTTCTATGAAGCAAGCAGAAGATAAGAAAAAGCGGGGTCGAGGAAAAGTTACTCCGGCAAAGGCTGCAACAAAATCTTCAGCTAAGGATGATGACAAAGAGATGGTGTCAACTCCAAAGTCAGCCCCAAAATTAACTAAGGATGAATCTCCCCAGGAGGCGACCCCTAAGACAAATTCAAAGAGGAAGCGTGCTTCAGGAAAAGAGAAGGAATCTGATGAGAAAGATTATGGCGAGGATATGGTTGGATCAAAGATTAAAGTTTGGTGGCCAAAAGATCGTACGTTTTATGAAGGTGTTGTCGCATCTTTTGATTCTGCTAAAAAGAAGCATAAGGTATCATATACAGATGGTGATAAAGAAACACTAAATCTTAAAAAAGAGAGGTGGGAGTTTGTAGCAGATGACCCTGACTCAGATGAGGAGCAAGGAAATGATCAATCGAGTCATGATGCTTCTTCTGACGTGCCTTTGAAGAAGAAAGTGAAAAAAAATCCTGATGACCCAACTAGGAAGGAAAAGATGGACACCTCGCCCAAATCGGGTGGAGGAGCTTCCTCCAGCAAATTGAAAGGTGCAAGAACTAAATTTGGTCACAAATCGAAAGAAAGCAGTAAATCTGATGGCAGATCCAAAGGTGCTTCTGGTAAAACGGATGACGAAAGTATTGGAAAATTGAAGGATCACACTCCCAAAAGTAGTGGTAAATCGGTTGATATTGCTCAGAAGACATCCAGCAAATTGAAGAACAATGATACCCAGACGCCTAAAAGCACCAAATCCAAGGAAGATGACAGCAGCGCACAAAAAGCTTCCACCAAGTCCAAGCAAGACGGACAGAAGGCTGGGAAGTCGAATCAGAGCACATCAAAGACGGCCTCCGTTTCCAAGGTTAGATCGTCTGCTAGCGGCAGCAAAGCAAATGCCAATGGTACGGGCAAGGCAAAATCTGCATCAAAGCCGACAAAAGAAGATGAGGATATGAAGGAAGCCTCAAGTGATACTGAGAAAGCACCAGAAAGTACACCAAAGGGGAAGTCCCCAACTTTAGCCAAGGCACTGGCAAGTGAGACCAAGTCTGGTAAGAAACGGCGAAGAGGAAGCAAAAGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1129

Amino Acids

123.43

Weight (kDa)

8.17

Isoelectric Point (pI)

42.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PDS5 PF20168 218 - 420 1e-53 Sister chromatid cohesion protein PDS5 protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1325
Acc36I ACCTGC 3 cut(s) 528, 1325, 1951
AccB1I GGYRCC 1 cut(s) 2201
AccI GTMKAC 1 cut(s) 2116
AccII CGCG 1 cut(s) 226
AciI CCGC 8 cut(s) 185, 224, 226, 457, 1451, 2268, 2308, 3183
AclI AACGTT 1 cut(s) 1077
AcoI YGGCCR 1 cut(s) 2543
AcsI RAATTY 9 cut(s) 92, 125, 142, 212, 682, 1698, 1732, 2449, 2861
AcuI CTGAAG 4 cut(s) 1749, 2238, 2337, 2454
AcyI GRCGYC 3 cut(s) 575, 2135, 3038
AdeI CACNNNGTG 1 cut(s) 1853
AfaI GTAC 5 cut(s) 84, 1224, 2557, 3208, 3298
AfeI AGCGCT 1 cut(s) 238
AfiI CCNNNNNNNGG 1 cut(s) 2816
AflII CTTAAG 2 cut(s) 1046, 1247
AjiI CACGTC 1 cut(s) 2740
AjnI CCWGG 4 cut(s) 154, 1455, 1981, 2427
AjuI GAANNNNNNNTTGG 2 cut(s) 611, 643
Alw21I GWGCWC 1 cut(s) 3140
Alw26I GTCTC 5 cut(s) 1088, 1550, 1670, 1997, 3338
AlwNI CAGNNNCTG 1 cut(s) 1559
Ama87I CYCGRG 1 cut(s) 282
Aor51HI AGCGCT 1 cut(s) 238
AoxI GGCC 6 cut(s) 54, 489, 1360, 1452, 2543, 3150
ApoI RAATTY 9 cut(s) 92, 125, 142, 212, 682, 1698, 1732, 2449, 2861
ArsI GACNNNNNNTTYG 6 cut(s) 132, 164, 2216, 2248, 3296, 3328
Asp700I GAANNNNTTC 3 cut(s) 882, 1032, 1836
AspLEI GCGC 3 cut(s) 239, 268, 3077
AspS9I GGNCC 5 cut(s) 55, 161, 489, 1000, 1453
AsuHPI GGTGA 7 cut(s) 699, 1003, 1058, 1349, 1839, 1997, 2639
AsuNHI GCTAGC 1 cut(s) 3179
AvaI CYCGRG 1 cut(s) 282
AvaII GGWCC 2 cut(s) 161, 1000
BaeGI GKGCMC 1 cut(s) 107
BalI TGGCCA 1 cut(s) 2545
BamHI GGATCC 1 cut(s) 1858
BanI GGYRCC 1 cut(s) 2201
BauI CACGAG 1 cut(s) 1851
BbsI GAAGAC 3 cut(s) 633, 2268, 3008
Bbv12I GWGCWC 1 cut(s) 3140
BbvCI CCTCAGC 1 cut(s) 762
BccI CCATC 9 cut(s) 66, 334, 748, 1969, 2243, 2371, 2618, 2791, 2891
BceAI ACGGC 3 cut(s) 1347, 3165, 3380
BciT130I CCWGG 4 cut(s) 156, 1457, 1983, 2429
BclI TGATCA 1 cut(s) 2710
BcoDI GTCTC 5 cut(s) 1088, 1550, 1670, 1997, 3338
BfaI CTAG 8 cut(s) 515, 540, 1164, 1313, 2187, 2265, 2784, 3180
BfmI CTRYAG 1 cut(s) 1689
BfoI RGCGCY 1 cut(s) 240
BfrI CTTAAG 2 cut(s) 1046, 1247
BfuAI ACCTGC 3 cut(s) 528, 1325, 1951
BglII AGATCT 1 cut(s) 1520
BlpI GCTNAGC 3 cut(s) 1140, 1347, 1371
BmcAI AGTACT 1 cut(s) 1224
Bme1390I CCNGG 4 cut(s) 156, 1457, 1983, 2429
Bme18I GGWCC 2 cut(s) 161, 1000
BmeT110I CYCGRG 1 cut(s) 282
BmgBI CACGTC 1 cut(s) 2740
BmgT120I GGNCC 5 cut(s) 55, 161, 489, 1000, 1453
BmiI GGNNCC 6 cut(s) 163, 633, 1860, 1941, 2089, 2203
BmrFI CCNGG 4 cut(s) 156, 1457, 1983, 2429
BmtI GCTAGC 1 cut(s) 3183
BoxI GACNNNNGTC 1 cut(s) 1773
BpiI GAAGAC 3 cut(s) 633, 2268, 3008
BplI GAGNNNNNCTC 2 cut(s) 226, 258
BpmI CTGGAG 2 cut(s) 1581, 2818
Bpu10I CCTNAGC 2 cut(s) 762, 2358
Bpu1102I GCTNAGC 3 cut(s) 1140, 1347, 1371
BpuEI CTTGAG 1 cut(s) 3253
Bsa29I ATCGAT 2 cut(s) 132, 329
BsaHI GRCGYC 3 cut(s) 575, 2135, 3038
BsaI GGTCTC 1 cut(s) 3338
BsaJI CCNNGG 8 cut(s) 224, 1089, 1413, 1455, 2427, 3057, 3162, 3327
Bsc4I CCNNNNNNNGG 1 cut(s) 2816
Bse1I ACTGG 3 cut(s) 1564, 2091, 3339
Bse3DI GCAATG 1 cut(s) 1660
BseBI CCWGG 4 cut(s) 156, 1457, 1983, 2429
BseCI ATCGAT 2 cut(s) 132, 329
BseDI CCNNGG 8 cut(s) 224, 1089, 1413, 1455, 2427, 3057, 3162, 3327
BseGI GGATG 6 cut(s) 899, 1085, 2368, 2422, 2935, 3005
BseLI CCNNNNNNNGG 1 cut(s) 2816
BseMI GCAATG 1 cut(s) 1660
BseNI ACTGG 3 cut(s) 1564, 2091, 3339
BseRI GAGGAG 4 cut(s) 1430, 1622, 2711, 2838
BseSI GKGCMC 1 cut(s) 107
BseYI CCCAGC 5 cut(s) 614, 1210, 1727, 1841, 3119
BsgI GTGCAG 2 cut(s) 714, 825
Bsh1236I CGCG 1 cut(s) 226
BshFI GGCC 6 cut(s) 56, 491, 1362, 1454, 2545, 3152
BshNI GGYRCC 1 cut(s) 2201
BshVI ATCGAT 2 cut(s) 132, 329
BsiHKAI GWGCWC 1 cut(s) 3140
BsiHKCI CYCGRG 1 cut(s) 282
BsiSI CCGG 1 cut(s) 2330
BsiWI CGTACG 1 cut(s) 2555
BslFI GGGAC 3 cut(s) 147, 632, 3298
BslI CCNNNNNNNGG 1 cut(s) 2816
BsmAI GTCTC 5 cut(s) 1088, 1550, 1670, 1997, 3338
BsmFI GGGAC 3 cut(s) 147, 632, 3298
BsmI GAATGC 2 cut(s) 754, 778
BsnI GGCC 6 cut(s) 56, 491, 1362, 1454, 2545, 3152
Bso31I GGTCTC 1 cut(s) 3338
BsoBI CYCGRG 1 cut(s) 282
Bsp1286I GDGCHC 2 cut(s) 107, 3140
Bsp1720I GCTNAGC 3 cut(s) 1140, 1347, 1371
Bsp19I CCATGG 1 cut(s) 1089
BspACI CCGC 8 cut(s) 185, 224, 226, 457, 1451, 2268, 2308, 3183
BspANI GGCC 6 cut(s) 56, 491, 1362, 1454, 2545, 3152
BspDI ATCGAT 2 cut(s) 132, 329
BspFNI CGCG 1 cut(s) 226
BspHI TCATGA 1 cut(s) 2722
BspLI GGNNCC 6 cut(s) 163, 633, 1860, 1941, 2089, 2203
BspMAI CTGCAG 1 cut(s) 1693
BspMI ACCTGC 3 cut(s) 528, 1325, 1951
BspOI GCTAGC 1 cut(s) 3183
BspT107I GGYRCC 1 cut(s) 2201
BspTI CTTAAG 2 cut(s) 1046, 1247
BspTNI GGTCTC 1 cut(s) 3338
BsrDI GCAATG 1 cut(s) 1660
BsrI ACTGG 3 cut(s) 1564, 2091, 3339
BssECI CCNNGG 8 cut(s) 224, 1089, 1413, 1455, 2427, 3057, 3162, 3327
BssNI GRCGYC 3 cut(s) 575, 2135, 3038
BssSI CACGAG 1 cut(s) 1851
BssT1I CCWWGG 4 cut(s) 1089, 3057, 3162, 3327
Bst2BI CACGAG 1 cut(s) 1851
Bst2UI CCWGG 4 cut(s) 156, 1457, 1983, 2429
Bst4CI ACNGT 1 cut(s) 967
Bst6I CTCTTC 3 cut(s) 1599, 1924, 3364
BstACI GRCGYC 3 cut(s) 575, 2135, 3038
BstAFI CTTAAG 2 cut(s) 1046, 1247
BstAPI GCANNNNNTGC 4 cut(s) 758, 848, 2339, 3224
BstC8I GCNNGC 5 cut(s) 298, 814, 2289, 2466, 3181
BstDSI CCRYGG 2 cut(s) 224, 1089
BstF5I GGATG 6 cut(s) 899, 1085, 2368, 2422, 2935, 3005
BstFNI CGCG 1 cut(s) 226
BstH2I RGCGCY 1 cut(s) 240
BstHHI GCGC 3 cut(s) 239, 268, 3077
BstMAI GTCTC 5 cut(s) 1088, 1550, 1670, 1997, 3338
BstMWI GCNNNNNNNGC 9 cut(s) 520, 758, 848, 947, 1952, 2054, 2339, 3083, 3224
BstNI CCWGG 4 cut(s) 156, 1457, 1983, 2429
BstPAI GACNNNNGTC 1 cut(s) 1773
BstSCI CCNGG 4 cut(s) 154, 1455, 1981, 2427
BstSFI CTRYAG 1 cut(s) 1689
BstSLI GKGCMC 1 cut(s) 107
BstUI CGCG 1 cut(s) 226
BstV2I GAAGAC 3 cut(s) 633, 2268, 3008
BstX2I RGATCY 6 cut(s) 175, 536, 1520, 1636, 1858, 2903
BstXI CCANNNNNNTGG 1 cut(s) 3334
BstYI RGATCY 6 cut(s) 175, 536, 1520, 1636, 1858, 2903
Bsu15I ATCGAT 2 cut(s) 132, 329
BsuRI GGCC 6 cut(s) 56, 491, 1362, 1454, 2545, 3152
BsuTUI ATCGAT 2 cut(s) 132, 329
BtgI CCRYGG 2 cut(s) 224, 1089
BtrI CACGTC 1 cut(s) 2740
BtsCI GGATG 6 cut(s) 899, 1085, 2368, 2422, 2935, 3005
BtsIMutI CAGTG 5 cut(s) 104, 826, 2098, 2241, 3332
BveI ACCTGC 3 cut(s) 528, 1325, 1951
Cac8I GCNNGC 5 cut(s) 298, 814, 2289, 2466, 3181
CaiI CAGNNNCTG 1 cut(s) 1559
CciI TCATGA 1 cut(s) 2722
CfoI GCGC 3 cut(s) 239, 268, 3077
Cfr13I GGNCC 5 cut(s) 55, 161, 489, 1000, 1453
Cfr42I CCGCGG 1 cut(s) 227
ClaI ATCGAT 2 cut(s) 132, 329
CseI GACGC 4 cut(s) 564, 2124, 2127, 3046
Csp6I GTAC 5 cut(s) 83, 1223, 2556, 3207, 3297
CspCI CAANNNNNGTGG 6 cut(s) 2157, 2192, 2800, 2835, 2956, 2991
CviAII CATG 3 cut(s) 917, 1090, 2723
CviQI GTAC 5 cut(s) 83, 1223, 2556, 3207, 3297
DraI TTTAAA 1 cut(s) 261
DraIII CACNNNGTG 1 cut(s) 1853
EaeI YGGCCR 1 cut(s) 2543
Eam1104I CTCTTC 3 cut(s) 1599, 1924, 3364
EarI CTCTTC 3 cut(s) 1599, 1924, 3364
EciI GGCGGA 1 cut(s) 200
Eco130I CCWWGG 4 cut(s) 1089, 3057, 3162, 3327
Eco31I GGTCTC 1 cut(s) 3338
Eco47I GGWCC 2 cut(s) 161, 1000
Eco47III AGCGCT 1 cut(s) 238
Eco57I CTGAAG 4 cut(s) 1749, 2238, 2337, 2454
Eco88I CYCGRG 1 cut(s) 282
EcoRI GAATTC 2 cut(s) 212, 1732
EcoRII CCWGG 4 cut(s) 154, 1455, 1981, 2427
EcoT14I CCWWGG 4 cut(s) 1089, 3057, 3162, 3327
EcoT22I ATGCAT 3 cut(s) 754, 1018, 1648
ErhI CCWWGG 4 cut(s) 1089, 3057, 3162, 3327
FaeI CATG 3 cut(s) 920, 1093, 2726
FalI AAGNNNNNCTT 4 cut(s) 588, 620, 866, 898
FaqI GGGAC 3 cut(s) 147, 632, 3298
FatI CATG 3 cut(s) 916, 1089, 2722
FauI CCCGC 2 cut(s) 231, 2301
FbaI TGATCA 1 cut(s) 2710
FblI GTMKAC 1 cut(s) 2116
FokI GGATG 6 cut(s) 886, 1072, 2375, 2429, 2942, 2992
FspBI CTAG 8 cut(s) 515, 540, 1164, 1313, 2187, 2265, 2784, 3180
GlaI GCGC 3 cut(s) 238, 267, 3076
GsaI CCCAGC 5 cut(s) 618, 1214, 1731, 1845, 3123
GsuI CTGGAG 2 cut(s) 1581, 2818
HaeII RGCGCY 1 cut(s) 240
HaeIII GGCC 6 cut(s) 56, 491, 1362, 1454, 2545, 3152
HapII CCGG 1 cut(s) 2330
HgaI GACGC 4 cut(s) 564, 2124, 2127, 3046
HhaI GCGC 3 cut(s) 239, 268, 3077
Hin1I GRCGYC 3 cut(s) 575, 2135, 3038
Hin1II CATG 3 cut(s) 920, 1093, 2726
Hin6I GCGC 3 cut(s) 237, 266, 3075
HinP1I GCGC 3 cut(s) 237, 266, 3075
HincII GTYRAC 4 cut(s) 1516, 1746, 1912, 2385
HindII GTYRAC 4 cut(s) 1516, 1746, 1912, 2385
HindIII AAGCTT 2 cut(s) 1276, 3084
HpaI GTTAAC 1 cut(s) 1912
HpaII CCGG 1 cut(s) 2330
HphI GGTGA 7 cut(s) 699, 1003, 1058, 1349, 1839, 1997, 2639
Hpy166II GTNNAC 7 cut(s) 1516, 1540, 1746, 1912, 2117, 2385, 3299
Hpy8I GTNNAC 7 cut(s) 1516, 1540, 1746, 1912, 2117, 2385, 3299
Hpy99I CGWCG 1 cut(s) 580
HpyCH4III ACNGT 1 cut(s) 967
HpyCH4IV ACGT 4 cut(s) 85, 1077, 2558, 2739
HpyF10VI GCNNNNNNNGC 9 cut(s) 520, 758, 848, 947, 1952, 2054, 2339, 3083, 3224
HpySE526I ACGT 4 cut(s) 85, 1077, 2558, 2739
Hsp92I GRCGYC 3 cut(s) 575, 2135, 3038
Hsp92II CATG 3 cut(s) 920, 1093, 2726
HspAI GCGC 3 cut(s) 237, 266, 3075
Ksp22I TGATCA 1 cut(s) 2710
KspAI GTTAAC 1 cut(s) 1912
KspI CCGCGG 1 cut(s) 227
LmnI GCTCC 4 cut(s) 247, 2042, 2698, 2825
MaeI CTAG 8 cut(s) 515, 540, 1164, 1313, 2187, 2265, 2784, 3180
MaeII ACGT 4 cut(s) 85, 1077, 2558, 2739
MaeIII GTNAC 6 cut(s) 16, 148, 1337, 2077, 2323, 2867
MfeI CAATTG 3 cut(s) 1197, 1771, 2169
MflI RGATCY 6 cut(s) 175, 536, 1520, 1636, 1858, 2903
MhlI GDGCHC 2 cut(s) 107, 3140
MlsI TGGCCA 1 cut(s) 2545
MluNI TGGCCA 1 cut(s) 2545
MlyI GAGTC 5 cut(s) 1099, 1565, 1592, 2681, 2728
MmeI TCCRAC 4 cut(s) 228, 781, 978, 2500
Mox20I TGGCCA 1 cut(s) 2545
Mph1103I ATGCAT 3 cut(s) 754, 1018, 1648
MroXI GAANNNNTTC 3 cut(s) 882, 1032, 1836
MscI TGGCCA 1 cut(s) 2545
MslI CAYNNNNRTG 2 cut(s) 1321, 1821
Msp20I TGGCCA 1 cut(s) 2545
MspA1I CMGCKG 3 cut(s) 226, 1511, 1877
MspCI CTTAAG 2 cut(s) 1046, 1247
MspI CCGG 1 cut(s) 2330
MspR9I CCNGG 4 cut(s) 156, 1457, 1983, 2429
MunI CAATTG 3 cut(s) 1197, 1771, 2169
Mva1269I GAATGC 2 cut(s) 754, 778
MvaI CCWGG 4 cut(s) 156, 1457, 1983, 2429
MvnI CGCG 1 cut(s) 226
MwoI GCNNNNNNNGC 9 cut(s) 520, 758, 848, 947, 1952, 2054, 2339, 3083, 3224
NcoI CCATGG 1 cut(s) 1089
NheI GCTAGC 1 cut(s) 3179
NlaIII CATG 3 cut(s) 920, 1093, 2726
NlaIV GGNNCC 6 cut(s) 163, 633, 1860, 1941, 2089, 2203
NmeAIII GCCGAG 1 cut(s) 1438
NmuCI GTSAC 4 cut(s) 16, 148, 1337, 2867
NsiI ATGCAT 3 cut(s) 754, 1018, 1648
PaeR7I CTCGAG 1 cut(s) 282
PagI TCATGA 1 cut(s) 2722
PaqCI CACCTGC 1 cut(s) 1325
PctI GAATGC 2 cut(s) 754, 778
PdmI GAANNNNTTC 3 cut(s) 882, 1032, 1836
Pfl23II CGTACG 1 cut(s) 2555
PflFI GACNNNGTC 1 cut(s) 3349
PleI GAGTC 5 cut(s) 1099, 1565, 1591, 2681, 2727
PpsI GAGTC 5 cut(s) 1099, 1565, 1591, 2681, 2727
PshAI GACNNNNGTC 1 cut(s) 1773
Psp1406I AACGTT 1 cut(s) 1077
Psp6I CCWGG 4 cut(s) 154, 1455, 1981, 2427
PspFI CCCAGC 5 cut(s) 614, 1210, 1727, 1841, 3119
PspGI CCWGG 4 cut(s) 154, 1455, 1981, 2427
PspLI CGTACG 1 cut(s) 2555
PspN4I GGNNCC 6 cut(s) 163, 633, 1860, 1941, 2089, 2203
PspPI GGNCC 5 cut(s) 55, 161, 489, 1000, 1453
PstI CTGCAG 1 cut(s) 1693
PstNI CAGNNNCTG 1 cut(s) 1559
PsuI RGATCY 6 cut(s) 175, 536, 1520, 1636, 1858, 2903
PsyI GACNNNGTC 1 cut(s) 3349
PvuII CAGCTG 2 cut(s) 1511, 1877
RsaI GTAC 5 cut(s) 84, 1224, 2557, 3208, 3298
RsaNI GTAC 5 cut(s) 83, 1223, 2556, 3207, 3297
RseI CAYNNNNRTG 2 cut(s) 1321, 1821
SacII CCGCGG 1 cut(s) 227
Sau96I GGNCC 5 cut(s) 55, 161, 489, 1000, 1453
ScaI AGTACT 1 cut(s) 1224
SchI GAGTC 5 cut(s) 1099, 1565, 1592, 2681, 2728
ScrFI CCNGG 4 cut(s) 156, 1457, 1983, 2429
SduI GDGCHC 2 cut(s) 107, 3140
SfcI CTRYAG 1 cut(s) 1689
Sfr274I CTCGAG 1 cut(s) 282
Sfr303I CCGCGG 1 cut(s) 227
SgrBI CCGCGG 1 cut(s) 227
SinI GGWCC 2 cut(s) 161, 1000
SlaI CTCGAG 1 cut(s) 282
SmiMI CAYNNNNRTG 2 cut(s) 1321, 1821
SmlI CTYRAG 4 cut(s) 282, 1046, 1247, 3268
SmoI CTYRAG 4 cut(s) 282, 1046, 1247, 3268
SsiI CCGC 8 cut(s) 185, 224, 226, 457, 1451, 2268, 2308, 3183
SspMI CTAG 8 cut(s) 515, 540, 1164, 1313, 2187, 2265, 2784, 3180
StyD4I CCNGG 4 cut(s) 154, 1455, 1981, 2427
StyI CCWWGG 4 cut(s) 1089, 3057, 3162, 3327
TaaI ACNGT 1 cut(s) 967
TaiI ACGT 4 cut(s) 88, 1080, 2561, 2742
TatI WGTACW 2 cut(s) 1222, 3296
TauI GCSGC 2 cut(s) 1454, 3186
TscAI CASTG 5 cut(s) 104, 826, 2098, 2241, 3339
TseFI GTSAC 4 cut(s) 16, 148, 1337, 2867
Tsp45I GTSAC 4 cut(s) 16, 148, 1337, 2867
TspRI CASTG 5 cut(s) 104, 826, 2098, 2241, 3339
Tth111I GACNNNGTC 1 cut(s) 3349
Vha464I CTTAAG 2 cut(s) 1046, 1247
VpaK11BI GGWCC 2 cut(s) 161, 1000
XapI RAATTY 9 cut(s) 92, 125, 142, 212, 682, 1698, 1732, 2449, 2861
XbaI TCTAGA 2 cut(s) 539, 2186
XhoI CTCGAG 1 cut(s) 282
XmiI GTMKAC 1 cut(s) 2116
XmnI GAANNNNTTC 3 cut(s) 882, 1032, 1836
XspI CTAG 8 cut(s) 515, 540, 1164, 1313, 2187, 2265, 2784, 3180
ZrmI AGTACT 1 cut(s) 1224
Zsp2I ATGCAT 3 cut(s) 754, 1018, 1648
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.