Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0009656

Physical Location & Seq

Genomic Coordinates Forward (+)

2967939 .. 2971221

Gene Structure 3283 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1593 bp

ATGGCGGTCCAGTTCAAATTCAGAAGCTCCGTCAACTTTGAATCCGTCGCCATCGACGGCCGCGCCTCCATCTCCGTTCGCGATCTCAAATCCAAGATAATTCGCCACAAGAACCTCAACCTCTGCCAAGACTCCGAACTCGTCTTCTCTGACGCCGTAACCGGTCAAGAGTACAACGACGAGAGCATTCAAATTCCTTGCGGTTCTAGCGTGGTAATTAAGAGAGTTCCTGCAGGATCAGTACATGTGAACCAGCCTCACTTCAATTCATGTCAGAATCTTCATAGCAAGGACTCTGTGGATGCTAAATCACCCGCTGCACCGAATGCTGAGACTGTTGACTTTGATGACTTTGGGGTTGACTTGTATCCCATTCCTAAAGAAACCCTTTTCAGTTCTGATTTGGATACGGACAAGGATAACTTCATCTATGATTATCAACCAAATACCGATAACGGCATCAAAAGATATTCGGAGCCCGCTATGAGACGATGCTTGAAACTTGAAGCAAGTGGCATTAGTGATGCTATTCCAGGAGTTCATGCGCATAGTGGAGTTGAACAAATCATATTGCCGACAAAATCAAAGCCTGAAGAAGAAGACATGAATGTGGAAAGGGTGGGCAGTGCGAATGCCCTGGATACACCGCATGCTAATTTGTCATCAGAGCTGAAATGCTCTCTATGCAACGCATTTTTCAAGGAGGCCGTAATGATACCATGCTGCCAGCACAGTTTTTGTGAGAAATGTATTTCTCAAGTGTTGCGAGAGAAGACCAGATGTCCCATGTGTCTTTTGACCAAATGCAGAGTAGAAGATTTGGTGCCAAATGTTTCTCTGAGGCAAGCAATTGAGCATTTCCTAGAATCCCAAAATTTAATCACTGCTCCAGATAATGATTGTTGCCAGTATGCTCCAGATGGAGAATCTGGAATTCAGGCCAAAGATGTGTCTCGGGGCGGTAATATTTTACAAAGAGAGGCAGAGGCGCCTCATTCTCCTGAAACAGGGACAGGTTCTAATCATTTATTCGCAGAATCTGCTTTTAACCCTCCTTTCCAAAAAGATGTTAAACCTGCAATCACAAAAAAGAGGCCACCTTGGGTTTCTACAGAAGGTGGTGACAAGAGCTTCTCAGAGACTGGAAAGCACAGAAAGGGGGAACGTACCTGTTACAGGTGTGGTTCGCCAGACCATTTCATCAGAGACTGTCCAGTTGCTTCAAGCCCACATCCTATGCTTCATGCAGGAAATGCAATCTTTCCAGGAGCTATGCCAGGTTATGTACCACCATACTGGAATGGGGCTTCCTCACCTCATGCCATGCCTTTTGGAAATCCATATGGAAATCATGCGATGACGGCTTTTGGCACAAATATGGTCCCTCCTGCTCCTTATGCAGTTCCTGCATACATGCCATCTATGTATAACACGTTCCCTTCCTTTGGTGGATATATGAGGATGGGAGGTGTTGCTCCTCTTCCAGTGACTGGTGAAGACTGCCATTTAAGTCGTTCAGAATCCATGGATCTTCATGGTTGGGTAAAGAGAAGAAAAGTTTCAAATGAGAATTTGAGGAGAACAATCTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001701 GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006275 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006950 GO:0006974 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009790 GO:0009792 GO:0009888 GO:0009889 GO:0009987 GO:0010556 GO:0016567 GO:0016604 GO:0016607 GO:0016740 GO:0019219 GO:0019222 GO:0019538 GO:0019787 GO:0019899 GO:0019900 GO:0019901 GO:0019941 GO:0030163 GO:0031323 GO:0031326 GO:0031974 GO:0031981 GO:0032446 GO:0032501 GO:0032502 GO:0032991 GO:0033554 GO:0035264 GO:0036211 GO:0040007 GO:0043009 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048513 GO:0048568 GO:0048589 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051171 GO:0051603 GO:0051716 GO:0060255 GO:0060429 GO:0061053 GO:0061630 GO:0061659 GO:0065007 GO:0070013 GO:0070647 GO:0071704 GO:0080090 GO:0140096 GO:1901564 GO:1901565 GO:1901575 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DWNN zf-C3HC4_2 zf-CCHC

Protein Analysis

531

Amino Acids

58.28

Weight (kDa)

6.18

Isoelectric Point (pI)

47.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DWNN	PF08783	3 - 77	2.2e-20	DWNN domain
zf-C3HC4_2	PF13923	225 - 264	1.9e-09	Zinc finger, C3HC4 type (RING finger)
zf-RING_2	PF13639	225 - 264	5.5e-06	Ring finger domain
zf-C3HC4	PF00097	226 - 264	1.6e-06	Zinc finger, C3HC4 type (RING finger)
zf-CCHC	PF00098	389 - 405	2.5e-06	Zinc knuckle

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0009656)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120 FvH4_2g31120
malus_domestica	MD08G1070600.v1.1 MD15G1051500.v1.1
prunus_persica	Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1 Prupe.1G405500_v2.0.a1
pyrus_communis	pycom08g05840 pycom15g04930
rosa_chinensis	RchiOBHm_Chr6g0311661
rosa_laevigata	RLG00000010383
rosa_roxburghii	Rroxscaffold_7G00157400
rosa_rugosa	Rorug06G0390500.1
rosa_samantha	Rh6AG505800 Rh6BG516600 Rh6CG522500 Rh6DG508200
rosa_wichuraiana	Rw6G044020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	546
Acc36I	ACCTGC	1 cut(s)	1084
AccB1I	GGYRCC	2 cut(s)	823, 988
AccB7I	CCANNNNNTGG	1 cut(s)	1490
AccII	CGCG	2 cut(s)	63, 81
AciI	CCGC	7 cut(s)	5, 61, 201, 315, 480, 647, 960
AclWI	GGATC	2 cut(s)	244, 1536
AcoI	YGGCCR	1 cut(s)	58
AcsI	RAATTY	5 cut(s)	17, 192, 874, 933, 1570
AcuI	CTGAAG	1 cut(s)	612
AcyI	GRCGYC	2 cut(s)	153, 989
AfaI	GTAC	4 cut(s)	173, 243, 1168, 1287
AfiI	CCNNNNNNNGG	4 cut(s)	1007, 1176, 1445, 1490
AflIII	ACRYGT	2 cut(s)	244, 1431
AgeI	ACCGGT	1 cut(s)	161
AhdI	GACNNNNNGTC	1 cut(s)	780
AjnI	CCWGG	4 cut(s)	532, 636, 1264, 1276
AluBI	AGCT	4 cut(s)	27, 670, 1131, 1271
AluI	AGCT	4 cut(s)	27, 670, 1131, 1271
Alw26I	GTCTC	5 cut(s)	326, 481, 957, 1133, 1200
AlwI	GGATC	2 cut(s)	244, 1536
AlwNI	CAGNNNCTG	5 cut(s)	1040, 1142, 1209, 1406, 1490
Ama87I	CYCGRG	1 cut(s)	954
AoxI	GGCC	4 cut(s)	58, 705, 939, 1094
ApeKI	GCWGC	2 cut(s)	317, 723
ApoI	RAATTY	5 cut(s)	17, 192, 874, 933, 1570
AsiGI	ACCGGT	1 cut(s)	161
Asp700I	GAANNNNTTC	1 cut(s)	1558
AspLEI	GCGC	3 cut(s)	65, 547, 991
AspS9I	GGNCC	2 cut(s)	7, 1381
AsuHPI	GGTGA	4 cut(s)	303, 1133, 1305, 1505
AvaI	CYCGRG	1 cut(s)	954
AvaII	GGWCC	2 cut(s)	7, 1381
BanI	GGYRCC	2 cut(s)	823, 988
BanII	GRGCYC	1 cut(s)	480
BbsI	GAAGAC	4 cut(s)	136, 606, 779, 1503
BbvI	GCAGC	2 cut(s)	304, 710
BccI	CCATC	5 cut(s)	59, 77, 914, 1426, 1456
BceAI	ACGGC	5 cut(s)	73, 140, 472, 692, 1377
BciT130I	CCWGG	4 cut(s)	534, 638, 1266, 1278
BciVI	GTATCC	3 cut(s)	378, 400, 634
BcoDI	GTCTC	5 cut(s)	326, 481, 957, 1133, 1200
BfaI	CTAG	2 cut(s)	207, 863
BfmI	CTRYAG	2 cut(s)	231, 1110
BfoI	RGCGCY	1 cut(s)	992
BfuAI	ACCTGC	1 cut(s)	1084
BfuI	GTATCC	3 cut(s)	378, 400, 634
BisI	GCNGC	3 cut(s)	61, 318, 724
BlsI	GCNGC	3 cut(s)	62, 319, 725
Bme1390I	CCNGG	4 cut(s)	534, 638, 1266, 1278
Bme18I	GGWCC	2 cut(s)	7, 1381
BmeRI	GACNNNNNGTC	1 cut(s)	780
BmeT110I	CYCGRG	1 cut(s)	954
BmgT120I	GGNCC	2 cut(s)	7, 1381
BmiI	GGNNCC	4 cut(s)	477, 825, 990, 1383
BmrFI	CCNGG	4 cut(s)	534, 638, 1266, 1278
BmsI	GCATC	4 cut(s)	292, 468, 482, 514
BpiI	GAAGAC	4 cut(s)	136, 606, 779, 1503
BpmI	CTGGAG	2 cut(s)	873, 900
BpuEI	CTTGAG	1 cut(s)	741
BsaHI	GRCGYC	2 cut(s)	153, 989
BsaJI	CCNNGG	3 cut(s)	636, 1100, 1524
BsaWI	WCCGGW	1 cut(s)	161
Bsc4I	CCNNNNNNNGG	4 cut(s)	1007, 1176, 1445, 1490
Bse118I	RCCGGY	1 cut(s)	161
Bse1I	ACTGG	7 cut(s)	10, 907, 1147, 1214, 1301, 1484, 1495
BseBI	CCWGG	4 cut(s)	534, 638, 1266, 1278
BseDI	CCNNGG	3 cut(s)	636, 1100, 1524
BseGI	GGATG	3 cut(s)	307, 1231, 1467
BseLI	CCNNNNNNNGG	4 cut(s)	1007, 1176, 1445, 1490
BseMII	CTCAG	3 cut(s)	321, 830, 1149
BseNI	ACTGG	7 cut(s)	10, 907, 1147, 1214, 1301, 1484, 1495
BseRI	GAGGAG	2 cut(s)	1467, 1591
BseX3I	CGGCCG	1 cut(s)	58
BseXI	GCAGC	2 cut(s)	304, 710
BsgI	GTGCAG	1 cut(s)	303
Bsh1236I	CGCG	2 cut(s)	63, 81
Bsh1285I	CGRYCG	1 cut(s)	61
BshFI	GGCC	4 cut(s)	60, 707, 941, 1096
BshNI	GGYRCC	2 cut(s)	823, 988
BshTI	ACCGGT	1 cut(s)	161
BsiEI	CGRYCG	1 cut(s)	61
BsiHKCI	CYCGRG	1 cut(s)	954
BsiSI	CCGG	1 cut(s)	162
BslFI	GGGAC	3 cut(s)	768, 1024, 1367
BslI	CCNNNNNNNGG	4 cut(s)	1007, 1176, 1445, 1490
BsmAI	GTCTC	5 cut(s)	326, 481, 957, 1133, 1200
BsmBI	CGTCTC	1 cut(s)	481
BsmFI	GGGAC	3 cut(s)	768, 1024, 1367
BsmI	GAATGC	3 cut(s)	186, 331, 637
BsnI	GGCC	4 cut(s)	60, 707, 941, 1096
BsoBI	CYCGRG	1 cut(s)	954
Bsp1286I	GDGCHC	1 cut(s)	480
Bsp143I	GATC	3 cut(s)	82, 236, 1528
Bsp19I	CCATGG	1 cut(s)	1524
Bsp68I	TCGCGA	1 cut(s)	81
BspACI	CCGC	7 cut(s)	5, 61, 201, 315, 480, 647, 960
BspANI	GGCC	4 cut(s)	60, 707, 941, 1096
BspCNI	CTCAG	3 cut(s)	322, 831, 1148
BspFNI	CGCG	2 cut(s)	63, 81
BspHI	TCATGA	1 cut(s)	1589
BspLI	GGNNCC	4 cut(s)	477, 825, 990, 1383
BspMAI	CTGCAG	1 cut(s)	235
BspMI	ACCTGC	1 cut(s)	1084
BspPI	GGATC	2 cut(s)	244, 1536
BspT107I	GGYRCC	2 cut(s)	823, 988
BsrFI	RCCGGY	1 cut(s)	161
BsrI	ACTGG	7 cut(s)	10, 907, 1147, 1214, 1301, 1484, 1495
BssAI	RCCGGY	1 cut(s)	161
BssECI	CCNNGG	3 cut(s)	636, 1100, 1524
BssMI	GATC	3 cut(s)	82, 236, 1528
BssNI	GRCGYC	2 cut(s)	153, 989
BssT1I	CCWWGG	2 cut(s)	1100, 1524
Bst2UI	CCWGG	4 cut(s)	534, 638, 1266, 1278
Bst4CI	ACNGT	3 cut(s)	337, 734, 1211
Bst6I	CTCTTC	1 cut(s)	1485
BstACI	GRCGYC	2 cut(s)	153, 989
BstAPI	GCANNNNNTGC	4 cut(s)	326, 1040, 1253, 1406
BstC8I	GCNNGC	4 cut(s)	480, 651, 728, 846
BstDEI	CTNAG	3 cut(s)	330, 839, 1135
BstDSI	CCRYGG	1 cut(s)	1524
BstENI	CCTNNNNNAGG	2 cut(s)	1005, 1174
BstF5I	GGATG	3 cut(s)	307, 1231, 1467
BstFNI	CGCG	2 cut(s)	63, 81
BstH2I	RGCGCY	1 cut(s)	992
BstHHI	GCGC	3 cut(s)	65, 547, 991
BstKTI	GATC	3 cut(s)	85, 239, 1531
BstMAI	GTCTC	5 cut(s)	326, 481, 957, 1133, 1200
BstMBI	GATC	3 cut(s)	82, 236, 1528
BstMCI	CGRYCG	1 cut(s)	61
BstMWI	GCNNNNNNNGC	8 cut(s)	207, 326, 684, 1040, 1253, 1361, 1397, 1406
BstNI	CCWGG	4 cut(s)	534, 638, 1266, 1278
BstNSI	RCATGY	3 cut(s)	248, 653, 1417
BstSCI	CCNGG	4 cut(s)	532, 636, 1264, 1276
BstSFI	CTRYAG	2 cut(s)	231, 1110
BstUI	CGCG	2 cut(s)	63, 81
BstV1I	GCAGC	2 cut(s)	304, 710
BstV2I	GAAGAC	4 cut(s)	136, 606, 779, 1503
BstX2I	RGATCY	1 cut(s)	1528
BstXI	CCANNNNNNTGG	1 cut(s)	1296
BstYI	RGATCY	1 cut(s)	1528
BstZI	CGGCCG	1 cut(s)	58
BsuI	GTATCC	3 cut(s)	378, 400, 634
BsuRI	GGCC	4 cut(s)	60, 707, 941, 1096
BtgI	CCRYGG	1 cut(s)	1524
BtgZI	GCGATG	1 cut(s)	1370
BtsCI	GGATG	3 cut(s)	307, 1231, 1467
BtsI	GCAGTG	2 cut(s)	631, 882
BtsIMutI	CAGTG	3 cut(s)	631, 882, 1491
BtuMI	TCGCGA	1 cut(s)	81
BveI	ACCTGC	1 cut(s)	1084
Cac8I	GCNNGC	4 cut(s)	480, 651, 728, 846
CaiI	CAGNNNCTG	5 cut(s)	1040, 1142, 1209, 1406, 1490
CciI	TCATGA	1 cut(s)	1589
CfoI	GCGC	3 cut(s)	65, 547, 991
Cfr10I	RCCGGY	1 cut(s)	161
Cfr13I	GGNCC	2 cut(s)	7, 1381
CseI	GACGC	1 cut(s)	161
Csp6I	GTAC	4 cut(s)	172, 242, 1167, 1286
CspAI	ACCGGT	1 cut(s)	161
CviQI	GTAC	4 cut(s)	172, 242, 1167, 1286
DdeI	CTNAG	3 cut(s)	330, 839, 1135
DinI	GGCGCC	1 cut(s)	990
DpnI	GATC	3 cut(s)	84, 238, 1530
DpnII	GATC	3 cut(s)	82, 236, 1528
DriI	GACNNNNNGTC	1 cut(s)	780
EaeI	YGGCCR	1 cut(s)	58
EagI	CGGCCG	1 cut(s)	58
Eam1104I	CTCTTC	1 cut(s)	1485
Eam1105I	GACNNNNNGTC	1 cut(s)	780
EarI	CTCTTC	1 cut(s)	1485
EclXI	CGGCCG	1 cut(s)	58
Eco130I	CCWWGG	2 cut(s)	1100, 1524
Eco24I	GRGCYC	1 cut(s)	480
Eco47I	GGWCC	2 cut(s)	7, 1381
Eco52I	CGGCCG	1 cut(s)	58
Eco57I	CTGAAG	1 cut(s)	612
Eco88I	CYCGRG	1 cut(s)	954
EcoNI	CCTNNNNNAGG	2 cut(s)	1005, 1174
EcoRI	GAATTC	1 cut(s)	933
EcoRII	CCWGG	4 cut(s)	532, 636, 1264, 1276
EcoT14I	CCWWGG	2 cut(s)	1100, 1524
EcoT38I	GRGCYC	1 cut(s)	480
EgeI	GGCGCC	1 cut(s)	990
EheI	GGCGCC	1 cut(s)	990
ErhI	CCWWGG	2 cut(s)	1100, 1524
Esp3I	CGTCTC	1 cut(s)	481
FalI	AAGNNNNNCTT	4 cut(s)	372, 404, 407, 439
FaqI	GGGAC	3 cut(s)	768, 1024, 1367
FauI	CCCGC	2 cut(s)	322, 487
FauNDI	CATATG	1 cut(s)	1342
Fnu4HI	GCNGC	3 cut(s)	61, 318, 724
FokI	GGATG	3 cut(s)	314, 1218, 1474
FriOI	GRGCYC	1 cut(s)	480
Fsp4HI	GCNGC	3 cut(s)	61, 318, 724
FspAI	RTGCGCAY	1 cut(s)	546
FspBI	CTAG	2 cut(s)	207, 863
FspI	TGCGCA	1 cut(s)	546
GlaI	GCGC	3 cut(s)	64, 546, 990
GluI	GCNGC	3 cut(s)	61, 318, 724
GsuI	CTGGAG	2 cut(s)	873, 900
HaeII	RGCGCY	1 cut(s)	992
HaeIII	GGCC	4 cut(s)	60, 707, 941, 1096
HapII	CCGG	1 cut(s)	162
HgaI	GACGC	1 cut(s)	161
HhaI	GCGC	3 cut(s)	65, 547, 991
Hin1I	GRCGYC	2 cut(s)	153, 989
Hin6I	GCGC	3 cut(s)	63, 545, 989
HinP1I	GCGC	3 cut(s)	63, 545, 989
HincII	GTYRAC	3 cut(s)	34, 340, 361
HindII	GTYRAC	3 cut(s)	34, 340, 361
HinfI	GANTC	8 cut(s)	41, 131, 277, 293, 866, 926, 1037, 1520
HpaII	CCGG	1 cut(s)	162
HphI	GGTGA	4 cut(s)	303, 1133, 1305, 1505
Hpy166II	GTNNAC	4 cut(s)	34, 250, 340, 361
Hpy188III	TCNNGA	7 cut(s)	80, 167, 890, 917, 930, 1001, 1590
Hpy8I	GTNNAC	4 cut(s)	34, 250, 340, 361
Hpy99I	CGWCG	3 cut(s)	50, 59, 182
HpyAV	CCTTC	2 cut(s)	1109, 1449
HpyCH4III	ACNGT	3 cut(s)	337, 734, 1211
HpyCH4IV	ACGT	2 cut(s)	1165, 1433
HpyCH4V	TGCA	9 cut(s)	233, 320, 687, 807, 1079, 1247, 1256, 1400, 1409
HpyF10VI	GCNNNNNNNGC	8 cut(s)	207, 326, 684, 1040, 1253, 1361, 1397, 1406
HpyF3I	CTNAG	3 cut(s)	330, 839, 1135
HpySE526I	ACGT	2 cut(s)	1165, 1433
Hsp92I	GRCGYC	2 cut(s)	153, 989
HspAI	GCGC	3 cut(s)	63, 545, 989
KasI	GGCGCC	1 cut(s)	988
Kzo9I	GATC	3 cut(s)	82, 236, 1528
LmnI	GCTCC	7 cut(s)	32, 475, 892, 919, 1268, 1396, 1480
Lsp1109I	GCAGC	2 cut(s)	304, 710
LweI	GCATC	4 cut(s)	292, 468, 482, 514
MaeI	CTAG	2 cut(s)	207, 863
MaeII	ACGT	2 cut(s)	1165, 1433
MaeIII	GTNAC	4 cut(s)	157, 1121, 1172, 1486
MalI	GATC	3 cut(s)	84, 238, 1530
MboI	GATC	3 cut(s)	82, 236, 1528
MfeI	CAATTG	1 cut(s)	849
MflI	RGATCY	1 cut(s)	1528
MhlI	GDGCHC	1 cut(s)	480
Mly113I	GGCGCC	1 cut(s)	989
MlyI	GAGTC	2 cut(s)	125, 287
MroXI	GAANNNNTTC	1 cut(s)	1558
MseI	TTAA	5 cut(s)	219, 878, 1047, 1071, 1508
MslI	CAYNNNNRTG	2 cut(s)	608, 1376
MspA1I	CMGCKG	1 cut(s)	317
MspI	CCGG	1 cut(s)	162
MspR9I	CCNGG	4 cut(s)	534, 638, 1266, 1278
MunI	CAATTG	1 cut(s)	849
Mva1269I	GAATGC	3 cut(s)	186, 331, 637
MvaI	CCWGG	4 cut(s)	534, 638, 1266, 1278
MvnI	CGCG	2 cut(s)	63, 81
MwoI	GCNNNNNNNGC	8 cut(s)	207, 326, 684, 1040, 1253, 1361, 1397, 1406
NarI	GGCGCC	1 cut(s)	989
NcoI	CCATGG	1 cut(s)	1524
NdeI	CATATG	1 cut(s)	1342
NdeII	GATC	3 cut(s)	82, 236, 1528
NlaIV	GGNNCC	4 cut(s)	477, 825, 990, 1383
NmuCI	GTSAC	2 cut(s)	1121, 1486
NruI	TCGCGA	1 cut(s)	81
NsbI	TGCGCA	1 cut(s)	546
NspI	RCATGY	3 cut(s)	248, 653, 1417
PaeI	GCATGC	1 cut(s)	653
PagI	TCATGA	1 cut(s)	1589
PciI	ACATGT	1 cut(s)	244
PctI	GAATGC	3 cut(s)	186, 331, 637
PdmI	GAANNNNTTC	1 cut(s)	1558
PfeI	GAWTC	6 cut(s)	41, 277, 866, 926, 1037, 1520
PflMI	CCANNNNNTGG	1 cut(s)	1490
PfoI	TCCNGGA	2 cut(s)	532, 1264
PinAI	ACCGGT	1 cut(s)	161
PkrI	GCNGC	3 cut(s)	62, 319, 725
PleI	GAGTC	2 cut(s)	125, 287
PluTI	GGCGCC	1 cut(s)	992
PpsI	GAGTC	2 cut(s)	125, 287
PscI	ACATGT	1 cut(s)	244
Psp6I	CCWGG	4 cut(s)	532, 636, 1264, 1276
PspGI	CCWGG	4 cut(s)	532, 636, 1264, 1276
PspN4I	GGNNCC	4 cut(s)	477, 825, 990, 1383
PspPI	GGNCC	2 cut(s)	7, 1381
PsrI	GAACNNNNNNTAC	2 cut(s)	1418, 1450
PstI	CTGCAG	1 cut(s)	235
PstNI	CAGNNNCTG	5 cut(s)	1040, 1142, 1209, 1406, 1490
PsuI	RGATCY	1 cut(s)	1528
RruI	TCGCGA	1 cut(s)	81
RsaI	GTAC	4 cut(s)	173, 243, 1168, 1287
RsaNI	GTAC	4 cut(s)	172, 242, 1167, 1286
RseI	CAYNNNNRTG	2 cut(s)	608, 1376
SaqAI	TTAA	5 cut(s)	219, 878, 1047, 1071, 1508
SatI	GCNGC	3 cut(s)	61, 318, 724
Sau3AI	GATC	3 cut(s)	82, 236, 1528
Sau96I	GGNCC	2 cut(s)	7, 1381
SbfI	CCTGCAGG	1 cut(s)	235
SchI	GAGTC	2 cut(s)	125, 287
ScrFI	CCNGG	4 cut(s)	534, 638, 1266, 1278
SdaI	CCTGCAGG	1 cut(s)	235
SduI	GDGCHC	1 cut(s)	480
SfaNI	GCATC	4 cut(s)	292, 468, 482, 514
SfcI	CTRYAG	2 cut(s)	231, 1110
SfoI	GGCGCC	1 cut(s)	990
SinI	GGWCC	2 cut(s)	7, 1381
SmiMI	CAYNNNNRTG	2 cut(s)	608, 1376
SmlI	CTYRAG	1 cut(s)	756
SmoI	CTYRAG	1 cut(s)	756
SphI	GCATGC	1 cut(s)	653
Sse8387I	CCTGCAGG	1 cut(s)	235
SsiI	CCGC	7 cut(s)	5, 61, 201, 315, 480, 647, 960
SspDI	GGCGCC	1 cut(s)	988
SspI	AATATT	1 cut(s)	967
SspMI	CTAG	2 cut(s)	207, 863
StyD4I	CCNGG	4 cut(s)	532, 636, 1264, 1276
StyI	CCWWGG	2 cut(s)	1100, 1524
TaaI	ACNGT	3 cut(s)	337, 734, 1211
TaiI	ACGT	2 cut(s)	1168, 1436
TaqI	TCGA	1 cut(s)	54
TatI	WGTACW	2 cut(s)	171, 241
TauI	GCSGC	1 cut(s)	63
TfiI	GAWTC	6 cut(s)	41, 277, 866, 926, 1037, 1520
Tru1I	TTAA	5 cut(s)	219, 878, 1047, 1071, 1508
Tru9I	TTAA	5 cut(s)	219, 878, 1047, 1071, 1508
TscAI	CASTG	3 cut(s)	631, 889, 1491
TseFI	GTSAC	2 cut(s)	1121, 1486
TseI	GCWGC	2 cut(s)	317, 723
Tsp45I	GTSAC	2 cut(s)	1121, 1486
TspDTI	ATGAA	8 cut(s)	258, 272, 415, 530, 620, 1189, 1232, 1523
TspGWI	ACGGA	4 cut(s)	19, 34, 64, 425
TspRI	CASTG	3 cut(s)	631, 889, 1491
Van91I	CCANNNNNTGG	1 cut(s)	1490
VpaK11BI	GGWCC	2 cut(s)	7, 1381
XagI	CCTNNNNNAGG	2 cut(s)	1005, 1174
XapI	RAATTY	5 cut(s)	17, 192, 874, 933, 1570
XceI	RCATGY	3 cut(s)	248, 653, 1417
XmnI	GAANNNNTTC	1 cut(s)	1558
XspI	CTAG	2 cut(s)	207, 863

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.