RNA methyltransferase
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G10620 AT5G10620 |
| fragaria_vesca | FvH4_2g30670 |
| malus_domestica | MD15G1110100.v1.1 |
| prunus_persica | Prupe.1G462300_v2.0.a1 |
| pyrus_communis | pycom15g10030 |
| rosa_chinensis | RchiOBHm_Chr6g0312221 |
| rosa_laevigata | RLG00000010341 |
| rosa_multiflora | Rmu_sc0010924.1_g000004 |
| rosa_roxburghii | Rroxscaffold_7G00156940 |
| rosa_rugosa | Rorug06G0394200 |
| rosa_samantha | Rh6AG511100 Rh6BG522100 Rh6CG527900 Rh6DG513300 |
| rosa_wichuraiana | Rw6G044450 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 11 |
| AccBSI | CCGCTC | 1 cut(s) | 70 |
| AciI | CCGC | 1 cut(s) | 70 |
| AcoI | YGGCCR | 1 cut(s) | 145 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 24 |
| AgsI | TTSAA | 1 cut(s) | 114 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 61 |
| AluBI | AGCT | 1 cut(s) | 110 |
| AluI | AGCT | 1 cut(s) | 110 |
| AoxI | GGCC | 1 cut(s) | 145 |
| AspS9I | GGNCC | 3 cut(s) | 4, 15, 137 |
| AvaII | GGWCC | 3 cut(s) | 4, 15, 137 |
| BbsI | GAAGAC | 1 cut(s) | 186 |
| BccI | CCATC | 2 cut(s) | 67, 219 |
| BceAI | ACGGC | 1 cut(s) | 160 |
| Bme18I | GGWCC | 3 cut(s) | 4, 15, 137 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 61 |
| BmgT120I | GGNCC | 3 cut(s) | 4, 15, 137 |
| BmsI | GCATC | 1 cut(s) | 82 |
| BpiI | GAAGAC | 1 cut(s) | 186 |
| BsaJI | CCNNGG | 1 cut(s) | 148 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 24 |
| BseDI | CCNNGG | 1 cut(s) | 148 |
| BseGI | GGATG | 3 cut(s) | 46, 78, 97 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 24 |
| BshFI | GGCC | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 24 |
| BsnI | GGCC | 1 cut(s) | 147 |
| Bsp19I | CCATGG | 1 cut(s) | 148 |
| BspACI | CCGC | 1 cut(s) | 70 |
| BspANI | GGCC | 1 cut(s) | 147 |
| BsrBI | CCGCTC | 1 cut(s) | 70 |
| BssECI | CCNNGG | 1 cut(s) | 148 |
| BssT1I | CCWWGG | 1 cut(s) | 148 |
| BstDSI | CCRYGG | 1 cut(s) | 148 |
| BstF5I | GGATG | 3 cut(s) | 46, 78, 97 |
| BstV2I | GAAGAC | 1 cut(s) | 186 |
| BsuRI | GGCC | 1 cut(s) | 147 |
| BtgI | CCRYGG | 1 cut(s) | 148 |
| BtsCI | GGATG | 3 cut(s) | 46, 78, 97 |
| Cfr13I | GGNCC | 3 cut(s) | 4, 15, 137 |
| CseI | GACGC | 1 cut(s) | 118 |
| CviAII | CATG | 2 cut(s) | 149, 255 |
| CviJI | RGCY | 2 cut(s) | 110, 147 |
| CviKI_1 | RGCY | 2 cut(s) | 110, 147 |
| DraI | TTTAAA | 1 cut(s) | 207 |
| DriI | GACNNNNNGTC | 1 cut(s) | 61 |
| EaeI | YGGCCR | 1 cut(s) | 145 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 61 |
| Eco130I | CCWWGG | 1 cut(s) | 148 |
| Eco47I | GGWCC | 3 cut(s) | 4, 15, 137 |
| EcoT14I | CCWWGG | 1 cut(s) | 148 |
| ErhI | CCWWGG | 1 cut(s) | 148 |
| FaeI | CATG | 2 cut(s) | 152, 258 |
| FaiI | YATR | 6 cut(s) | 11, 59, 150, 200, 249, 256 |
| FatI | CATG | 2 cut(s) | 148, 254 |
| FokI | GGATG | 3 cut(s) | 53, 85, 104 |
| HaeIII | GGCC | 1 cut(s) | 147 |
| HgaI | GACGC | 1 cut(s) | 118 |
| Hin1II | CATG | 2 cut(s) | 152, 258 |
| Hpy166II | GTNNAC | 1 cut(s) | 137 |
| Hpy188I | TCNGA | 3 cut(s) | 19, 67, 267 |
| Hpy188III | TCNNGA | 1 cut(s) | 114 |
| Hpy8I | GTNNAC | 1 cut(s) | 137 |
| Hpy99I | CGWCG | 1 cut(s) | 134 |
| HpyAV | CCTTC | 1 cut(s) | 133 |
| HpyCH4IV | ACGT | 1 cut(s) | 169 |
| HpyCH4V | TGCA | 2 cut(s) | 95, 221 |
| HpySE526I | ACGT | 1 cut(s) | 169 |
| Hsp92II | CATG | 2 cut(s) | 152, 258 |
| LmnI | GCTCC | 2 cut(s) | 67, 107 |
| LpnPI | CCDG | 2 cut(s) | 81, 90 |
| LweI | GCATC | 1 cut(s) | 82 |
| MaeII | ACGT | 1 cut(s) | 169 |
| MbiI | CCGCTC | 1 cut(s) | 70 |
| MboII | GAAGA | 1 cut(s) | 186 |
| MfeI | CAATTG | 1 cut(s) | 158 |
| MluCI | AATT | 2 cut(s) | 158, 216 |
| MmeI | TCCRAC | 2 cut(s) | 18, 45 |
| MseI | TTAA | 1 cut(s) | 206 |
| MunI | CAATTG | 1 cut(s) | 158 |
| NcoI | CCATGG | 1 cut(s) | 148 |
| NlaIII | CATG | 2 cut(s) | 152, 258 |
| PsiI | TTATAA | 1 cut(s) | 11 |
| PspPI | GGNCC | 3 cut(s) | 4, 15, 137 |
| SaqAI | TTAA | 1 cut(s) | 206 |
| Sau96I | GGNCC | 3 cut(s) | 4, 15, 137 |
| SetI | ASST | 6 cut(s) | 9, 17, 112, 142, 172, 254 |
| SfaNI | GCATC | 1 cut(s) | 82 |
| SinI | GGWCC | 3 cut(s) | 4, 15, 137 |
| Sse9I | AATT | 2 cut(s) | 158, 216 |
| SsiI | CCGC | 1 cut(s) | 70 |
| StyI | CCWWGG | 1 cut(s) | 148 |
| TaiI | ACGT | 1 cut(s) | 172 |
| TasI | AATT | 2 cut(s) | 158, 216 |
| Tru1I | TTAA | 1 cut(s) | 206 |
| Tru9I | TTAA | 1 cut(s) | 206 |
| VpaK11BI | GGWCC | 3 cut(s) | 4, 15, 137 |