pycom15g10180

phosphatidylinositol-3-phosphate binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0005768
Physical Location & Seq
Forward (+)
6642976 .. 6661688
18713 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 7632 bp
ATGGACAAGGAAACCGAAATCCTCTCCCGCCTGGCCGCGAACCACCTCTATCTCGCCCAATTCGAGCCGCTCCGGGCGGTTCTCATCGCCCTCCGAGCCCGTAACCCCGAGCTCGCTCTCGCCGTGCTCCAGACCATCGTCGCGCAGTCTGGCCGGTTCGAGAACGTTCTCTGGTCGCAATCCTGTCCGTCGCCGGCTCTCCTCACTTACTTGTCGACCGTCGAGCTCTTGCAATTCGATAATGCGTCGTCGGCGTGGAGCTTCGATCCCGAAACGCTGCGGTTGCGGGCCGAGTTCTTGTTGTTAGTCCAGCAACTGATCGAGCGAGTATCGGAGAGTTTGCGGAAGGATTTCGATTTGGAGGGCATAGAGAAAGAGAAGGAGAAGGAAGGTTTGGGCGAGAGCGAGAGTTTCGAAGAGCGCGCGGAGTTGTTGGAGAAGAGTGAGGATACTAGCAAGGATTTGAGAGATGGCAGTGGGGAATTAGATAGCTGTGTGAAAGTTTTGGATAGGGTGTTGGAATTGGGGGTCAAGAGGTTGAAGCCGGGTTCTGTGGCGGTAGAGTCTGCTGATGCTGATGGTGGGAGTGGAAATGAGGCGCCAAGCGTTGTACCGATTGAGGAAGGCGAATTGATGTGTTTGAGGAGTGTAGTTTGGGAGTACCGTGATGTTTTCGAGGCGTTGTGTTGGAATATACAGAGCCAAGTGAGGGGGTGGGAGGGAGATGATTCTTCGGGTTTAGCTCTAACGGTGAGGAGGGACGAAAATGCAGGGGAAACCTCCGAGGAGGATTTGAAAGTTCTTGGTTTGATACAGAGGAGTGTTCAGTTAGCTCACTTAGATGCTATGAAAGAGGGCATGAAGAATGGTGATGTCGATGGAGTGGTTTCGCGGATTCGTTTTCTTCAACTTGATTATGGAGTGGAGGAGAACAAGTATCGCATGGTTCTGCAAGATCTTCTCAAGATGGTGTCATCAGGAAAGGAGGGATATGGAGATTCCTGGCGTGACATGCGAGAAAAGTTACTGGGGATTTATGGTGCCGCTCTTGCATCAAGTTGTGGACATCTTGTTGAAATGATACAAGTTCTTCAAGATGAGTTGCTCTCAGAAGAGATTGAGAAGTACAGATCTCTTGATAACAACCAGATTCCACCACCTCTTGAACGTCTTCAAAGATATCTTGCTGGGTTGAATCCTGAGGCAGATGTTTCTGATCAAACTTGTACCTTCAACACTGTAGCCGGATTTTGCATGAGAGACATGTACCATTATGCCCGTGTTTCTGGTTTACATGTCCTTGAATGTGTCATGGATACTGCTTTGTCTGCTGTGAAGAGGGAGCAGCTTCAAGAAGCTAGCAATATTCTTTTATTGTTTCCCCGACTTCAGCCCCTGGTAGCTGCCATGGGTTGGGATTCATTATCTGGCAAGACTGCAGCACGAAGGAAATTAATGCAACTGCTGTGGAGAAGCAAGTCACAGGTTTTACGCCTAGAAGAATCTTCTCTTTATAGTAATCAATCGGATGAGGTATCTTGTGTGGAATATCTCTGTGATTCTCTTTGTTATCGGCTTGATCTTGCCTCTTTTGTTGCCTGTGTCAATTCTGGTAAATCATGGAATTCAAAATCATCATTGATGTTGTCTGCTAAAGAACAACTAGCCTCCAGTAGTGAAGATGCTGAGAATGATCCTTTTGTCGAGAATTTCGTACTGGAAAGGCTTTCTGTTCAAAGTCCTCTTCGGGTATTGTTTGATGTTGTTCCAGGCATAAAGTTTCAGGAGGCCATTGAATTGATAAGCATGCAGCCAATTGCATCAACTTTAGAAGCCTGGAAGAGGATGCAGGATATTGAACTCATGCACATGCGCTATGCTCTAGATTCAGCTGTTCTTGCAGTTGGCGTGATGGAAAGGAGTATTACTGGTGAAAGAGACGGTCTTTATCAAGTTGCATTTAGCCATCTGAAAGATCTGCAGAACCATTTGGAGGCTGTCACTGACATCCCTCGCAAGATCATGATGGCAAATGTCATAATTTCACTTTTACATATGGATGATCTTTCTCTCAATTTGGATCATTGTGCTTCACTGGGGAGCTCTTCTGCATCACACCACTATGCTTCAGAACAAACTGATGAAACATGTGAAGGGGGAAATGAATTGGTTATATCCTTTACTGGGAAACTACTATCAATATTAAATCACTGTCTTCCGTCAACTGTAGCTGAACTAGATAATGCTCTACGTGAAGGCATTAGTAGGGATGGAAGACAAGCATTGGAGTGGAGGGCATCAATTGCTAAACATTTCATTGAAGAGTGGGAATGGCGGCTGTCAATTTTGCAGCGTCTTCTTCCATTATCTGAACGTCAGTGGCGGTGGAAGGAGGCATTGACTGTATTACGTGCCGCACCATCTAAGCTACTTAACCTGTGCATGCAGAGAGCAAAGTATGACATTGGCGAAGAAGCAGTGCATCGCTTTTCACTGTCTGCAGAAGATAAAGCTACTCTTGAATTAGCTGAGTGGGTGGATAGTGCTGTCAGAAGACAATCTGTAGAAGATGTAGTCTCTCGTGCTACTGATGGTGGGACTTCTACAATACAAGATCTGGATTTTTCTTCATTACGCTCCCAGTTAGGTCCCTTGGCTGCAATTCTTCTTTGTGTCGATGCTGCTGCTACTTCTGCTAGGTCTGCAAAGATGTCCCAGCAGCTTTTGGATCAGGCTCAAGTTATGCTGTCTGAGATATATCCAGGAGTTTCTCCAAAGATAGGCTCCATGTACTGGGATCAGATCCTTGAAGTGGCAGTTATATCTGTTTTAAAACGAATTCTGAAGCGTTTACATGAGTTCTTGGATCCGGATAATTCTCCAGCCCTTCAGGTCACTTTGTCTGGGGAGAACATCATTTCTTCACCAAAGGAATTCCAGAGACTAGGACAACGGGAGCGTGTTCTCGATATGCTACATCATATGATTGAGGATGCTCACAAGGGAAAGCGGCAGTTTCTCAGTGGTAAGCTCCATAATCTTGCAAGAGCTATAGCTGATGAAGAAACAGAGCTAAATTCTTTTAAAGGAGAAGGCCCATCTGGTGACCCAAAGGTTCTTTATGATCTTGACAAAGACGGAGTTCTTGGACTTGGGCTAAGAGTTTCCAAACAGATACCATCAAATTCCGCAGTTGGAGAAACTACCGTGCAGCCTGTTGGCTATGATGTAAAGGACAATGGGAAGAGATTATTTGGTCCAATAAGTACCAAACCCATGACATATCTTTCACAATTTATTCTCCATATTGCTGCAATTGGAGACATAGTTGACGGAACGGATACAACTCACGACTTCAACTTTTTTTCACTCGTGTATGAGTGGCCCAAGGATCTTTTAACTCGTCTTGTCTTTGAACAAGGCAGCACTGATGCAGCTGCTAAGGTAGCTGAGATCATGTGTGCAGATTTTGTCCATGAAGTAATTTCAGCATGTGTACCTCCAGTTTATCCCCCACGATCTGGTCATGGATGGGCCTGCATTCCGGTCTTTCCCACCTTCCCTAAAAGTGGCTCAGAAAATAAAGTATTATCCCCCTCTTTCAAAGATGCTAAGCCTAATAGTTACTGCCGGTCCTCATCCTTGCCCGGAATCCCTCTATACCCTCTTCAGTTAGATGTCATTAAACATTTGGTTAAGCTATCCCCAGTGAGGGCAGTCTTAGCATGTGTTTTTGGGAGTACAATTTTGTACAATGGCAGTGATTCTTCGATCTCAAGCTCCTTGGATGGTGGATCGCTGCAGGCACCTGATGTTGATCGGTTGTTTTATGAGTTTGCTCTTGATCAGTCGGAGAGGTTTCCAACTTTAAACCGATGGATACAAATGCAAACTAACCTTCATCGAGTTTCTGAGTTTGCTGTAACAATTAAGCAAACTGCTGATGGTGGCGAGGCTAGGGCTGAAGCAAGAGCTATCAAGAGATTACGCGAGCTTGACAGTGATACTGAGTCAGAAGCTGATGACATTGTTGGTAGCAGTAGTGTTTCAACAGCTTTACCAGACCTCAATGACCAAGGTGGTGCAGCTACTGAACCTTGGGATGACTCTTCAAAATCTGATGTTGCTGAGCTTGATACTTCAGTTTTCCTTTCTTTTGATTGGGAAAATGAAGAACCGTATGAGAAAGCTGTGCAGAGATTGATAGAAGAAGGAAAACTCATGGATGCTCTTGCACTGTCTGATCGCTATCTACGTAATGGAGCTTCAGATCATTTACTTCAGCTAATCATTGAAAGTGGGGAAGAAACTCGGTCAGTCCCTGTACAATCTCACGGTAATGGAGGAAATAGCATATGGAGCAATAGTTGGCAGTATTGCCTGCGGTTGAAGGATAAACAAGTGGCTGCTAGACTTGCTCTCAAGTATATGCATAGATGGGAACTGGATGCTGCTTTGGATGTTCTCACAATGTGCAGCTGCCACCTACCTCAAAGTGATTCCATTAGGAAGGAGGTCATGCATATGAGAGAAGCTCTGCAGAGGTACAGCCACATTCTAAGTGCAGATGAGCACTTTAGCAGCTGGCAAGAGGTTGAAGCAGAGTGTAAGGAAGATCCTGAGGGCTTGGCACTCAGATTAGCTGGAAAAGGAGCTGTTTCCGCTGCTTTAGAAGTGGCTGAAAGTGCAGGATTATCCATAGATTTGCGGAGAGAATTGCAGGGCCGGCAGCTTGTGAAACTTTTGACTGCAGATCCTCTCAGTGGTGGAGGTCCAGCAGAAGCTTCGCGGTTTCTATCTTCTCTACGTGAATCAGATGATGCTCTACCAGTTGCCATGGGTGCAATGCAGCTTTTACCTGATTTACGGTCAAAGCAGCTTCTTGTTCATTTCTTCCTGAAGCGAAGAGAAGGAAATCTTTCAGATGTTGAAGTTTCTCGGCTTAACTCATGGGCTTTAGGTCTTCGTGTTCTGGCTGCCTTGCCATTGCCATGGCAGCAAAGATGTTCTTCCTTGCATGAGCACCCTCACCTGATACTTGAGGTTCTTCTGATGAGGAAACAGCTACAGTCAGCTGCTTTGATTCTCAAAGAATTTCCTTTGTTGAGAGACAATAATGTCATTATTGCCTATGCTGCTAAAGCTATTGCTATCAGTATTAGCTCTCCCCCGAGAGAATATCGAGTATCTGTTTCAGGGACAAGATCAAAGCAGAAAACAAGAACAGGTGCACCTGTGAGGTCTTCTTTCACGAGCAGTCTAAGTAACCTGCAAAAAGAGGCTCGCAGAGCTTTCTCTTGGGCTCCACGAAATACCGGAGACAAGGCCGCCCCAAAAGATGTTTACCGTAAAAGAAAGAGTTCAGGTTTGACGCCATCAGAAAAAGTAGCTTGGGAGGCCATGGCTGGTATCCAAGAGGATCGTGCTTCAACATATTCTGTTGATGGGCAAGAACGTCTTCCTGCTATTTCCATTTCTGAAGAATGGATGCTAACTGGTGATGCAACGAAGGATGAAGCTGTTCGTGCATCTCACCGTTATGAAAGTGCCCCTGACATTACTCTTTTCAAGGCACTGGTTTCTCTATGTTCTGATGATTCTGTCTCTGCAAAAAGTGCATTGGATTTGTGTGTTAAACAGATGAAGAATGTGCTGAGCTCCCAACAATTGCCTGAGAATGCATCTATGGAAATAATTGGTCGAGCATATCATGCCACAGAGACGCTTGTACAGGGGCTACTTTACTCTAAATCCCTGCTGAGAAAGATTGTGGGTGGTAATGATTTGTCAAGTAATTCTGAAAGAAGTAGGGACATTGATGACGCATCCTCTGATGCTGGTAGCTCTAGTGTGGGCAGTCAGTCCACAGATGAGTTATCTGAAGTGTTGTCGCAGGCAGACATTTGGCTAGGACGCGCTGAGCTGCTCCAAAGCCTTCTGGGATCTGGAATAGCTGCTTCTCTAGATGATATTGCCGATAAAGAGTCATCTGCCCATCTCCGTGATAGGCTGATTGTAGATGAACGGTACAGCATGGCTGTATATACATGCAAAAAGTGCAAGATTGATGTTGTCCCTGTTTGGAATGCATGGGGACATGCTTTGATTCGGATGGAGCACTATGCCCAAGCTCGTGTCAAGTTCAAGCAAGCTCTCCAACTGTACAAAGCTGATCCTGCTCCTGTCATTCTTGAGATCATCAATACAATCGAAGGAGGTCCGCCTGTTGATGTTTCAGCTGTTCGTTCCATGTATGAACATTTGGCTAAAAGTGCACCGACAATCTTGGATGATTCTCTTTCTGCTGATGCATATCTCAACGTATTGTACATGCCTTCGACATTTCCTCGATCAGAGCGATCCAGGCGTTCTCATGAATCTGCGAATAGTAATTCCACTCATATTTCAGACTTTGAAGATGGACCTCGCAGCAACTTAGACAGCATACGATATGTTGAGTGTGTCAACTATTTACAAGAATATGCACGGCAGCATTTGCTCAATTTCATGTTTAGGCATGGTCATTATAATGATGCATGCATGCTGTTCTTTCCTCCAAATGCTGTTCCCCCACCTTCTCAGCCATCAACAGTGGGGGCAGCATCCTCATCTTCATCCCCTCAAAGACCAGACCCTTTGGGAACTGATTATGGGACCATTGATGATTTGTGTGATTTATGTGTTGGTTATGGCGCAATGGCTGTTTTAGAGGAAGTAATTTCAACAAGAATGTCATCTGAAAACCCGCAAGATGTAGCAGTAAGACAGTATACAGCTGCGGCCCTTTCCCGTATTTGCATCTACTGTGAAACTCACAGGCATTTCAATTATTTGTATAAGTTTCAGGTTATTAAGAAGGACCATGTTGCTGCTGGACTTTGCTGCATCCAATTGTTTATGAACTCATCTTTGCAAGAGGAAGCTATAAAACATTTGGAAAATGCCAAGATGCACTTTGATGAAGCGTTATCAGCACGATCCAAAGGTGGGGATTCTACTAAGCTTGTGACGAAGGGTGTTAGAGGAAAAAGTGCCTCTGAAAAGCTCACTGAAGAAGGACTTGTCAAGTTTTCGGCGCGGGTATCGATTCAGGTTGAAGTTGTGAGATCGTATAATGATGCGGATGGACCACATTGGAAACATTCACTTTTCGGAAATCCAAATGACCATGAAACATTCAGGAGAAGGTGCAAAATAGCTGAATCTCTTGTGGAAAAGAATTTTGATTTGGCTTTCCAAGTGATTTATGAATTCAATCTTCCAGCTGTGGATATATATGCTGGTGTTGCTGCATCACTCGCTGAGAGAAAAAAGGGTAGTCAACTGACAGAATTCTTTAGAAACATAAAAGGAACAATTGATGACGATGACTGGGACCAGGTCTTGGGAGCTGCAATTAATGTATATGCTAACAAACACAAAGAGCGCCCTGACCGTCTCATAGACATGTTGACCAGTAGCCACAGGAAGGTTCTGGCTTGTGTGGTTTGTGGTCGTCTAAAAAGTGCATTCCAAATTGCTTCTCGTAGTGGAAGTGTAGCCGATGTCCAATATGTAGCTCATCAGGCATTGCATGCGAATGCACTTCCTGTGCTGGATATGTGTAAACAATGGTTGGCCCAGTACATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

2544

Amino Acids

282.45

Weight (kDa)

5.36

Isoelectric Point (pI)

51.45

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_ZFYVE26 PF25569 2421 - 2540 2.4e-32 ZFYVE26-like, TPR repeats
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 6528
AasI GACNNNNNNGTC 1 cut(s) 5117
Acc36I ACCTGC 1 cut(s) 5277
AccB1I GGYRCC 3 cut(s) 598, 1040, 3805
AccB7I CCANNNNNTGG 4 cut(s) 1413, 2793, 3521, 7384
AccBSI CCGCTC 2 cut(s) 70, 1046
AccI GTMKAC 2 cut(s) 215, 6770
AccII CGCG 9 cut(s) 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078
AccIII TCCGGA 1 cut(s) 2869
AclI AACGTT 1 cut(s) 165
AcoI YGGCCR 2 cut(s) 33, 151
AcyI GRCGYC 2 cut(s) 599, 5372
AdeI CACNNNGTG 1 cut(s) 4473
AflIII ACRYGT 5 cut(s) 1263, 1294, 2147, 7446, 7626
AjnI CCWGG 8 cut(s) 30, 1001, 1395, 1768, 1835, 2761, 6362, 7377
AjuI GAANNNNNNNTTGG 4 cut(s) 377, 409, 7211, 7243
Alw44I GTGCAC 2 cut(s) 5229, 6273
AlwNI CAGNNNCTG 5 cut(s) 316, 1396, 4019, 4091, 4322
Ama87I CYCGRG 2 cut(s) 107, 5170
Aor13HI TCCGGA 1 cut(s) 2869
ApaLI GTGCAC 2 cut(s) 5229, 6273
AseI ATTAAT 2 cut(s) 1454, 7398
Asp700I GAANNNNTTC 6 cut(s) 350, 1170, 4918, 5359, 5457, 5520
AspLEI GCGC 9 cut(s) 145, 423, 425, 601, 1875, 5918, 6695, 7078, 7428
AsuC2I CCSGG 3 cut(s) 74, 546, 3648
AsuHPI GGTGA 8 cut(s) 763, 881, 1943, 2916, 3116, 5021, 5510, 5525
AsuII TTCGAA 1 cut(s) 414
AsuNHI GCTAGC 1 cut(s) 1358
AvaI CYCGRG 2 cut(s) 107, 5170
AxyI CCTNAGG 2 cut(s) 1200, 4620
BaeGI GKGCMC 3 cut(s) 5233, 5551, 6277
BaeI ACNNNNGTAYC 2 cut(s) 4128, 4161
BamHI GGATCC 1 cut(s) 2866
BanI GGYRCC 3 cut(s) 598, 1040, 3805
BanII GRGCYC 6 cut(s) 100, 114, 228, 2105, 5305, 5660
BarI GAAGNNNNNNTAC 2 cut(s) 4249, 4281
BauI CACGAG 4 cut(s) 2580, 3371, 5251, 6132
BbsI GAAGAC 8 cut(s) 1163, 2207, 2281, 2348, 2560, 4955, 5235, 5450
BceAI ACGGC 2 cut(s) 107, 6503
BcgI CGANNNNNNTGC 4 cut(s) 2666, 2700, 4767, 4801
BciT130I CCWGG 8 cut(s) 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379
BciVI GTATCC 5 cut(s) 442, 1309, 3334, 3873, 5420
BclI TGATCA 2 cut(s) 1216, 3844
BcnI CCSGG 3 cut(s) 74, 546, 3648
BfoI RGCGCY 2 cut(s) 602, 7429
BfuAI ACCTGC 1 cut(s) 5277
BfuI GTATCC 5 cut(s) 442, 1309, 3334, 3873, 5420
BglII AGATCT 4 cut(s) 955, 1130, 1975, 2614
BlpI GCTNAGC 4 cut(s) 3612, 4128, 5654, 5919
BmeT110I CYCGRG 2 cut(s) 107, 5170
BmiI GGNNCC 9 cut(s) 600, 1042, 2650, 2785, 2868, 3807, 5304, 6655, 7376
BmrI ACTGGG 8 cut(s) 1037, 2105, 2193, 2635, 2803, 3701, 7381, 7615
BmtI GCTAGC 1 cut(s) 1362
BmuI ACTGGG 8 cut(s) 1037, 2105, 2193, 2635, 2803, 3701, 7381, 7615
BoxI GACNNNNGTC 1 cut(s) 137
BpiI GAAGAC 8 cut(s) 1163, 2207, 2281, 2348, 2560, 4955, 5235, 5450
BplI GAGNNNNNCTC 4 cut(s) 1091, 1123, 4519, 4551
BpmI CTGGAG 4 cut(s) 113, 1654, 2865, 3486
Bpu10I CCTNAGC 1 cut(s) 3441
Bpu1102I GCTNAGC 4 cut(s) 3612, 4128, 5654, 5919
Bpu14I TTCGAA 1 cut(s) 414
BpuEI CTTGAG 6 cut(s) 947, 2721, 3760, 4406, 5060, 6212
BpuMI CCSGG 3 cut(s) 74, 546, 3648
Bsa29I ATCGAT 1 cut(s) 7085
BsaAI YACGTR 4 cut(s) 2252, 2411, 4256, 4808
BsaBI GATNNNNATC 3 cut(s) 3816, 4248, 6312
BsaHI GRCGYC 2 cut(s) 599, 5372
BsaWI WCCGGW 3 cut(s) 2869, 3544, 5315
BsaXI ACNNNNNCTCC 6 cut(s) 920, 950, 3312, 3342, 4351, 4381
Bse118I RCCGGY 4 cut(s) 153, 193, 3630, 4725
Bse21I CCTNAGG 2 cut(s) 1200, 4620
Bse3DI GCAATG 4 cut(s) 4851, 4985, 6702, 7568
Bse8I GATNNNNATC 3 cut(s) 3816, 4248, 6312
BseAI TCCGGA 1 cut(s) 2869
BseBI CCWGG 8 cut(s) 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379
BseCI ATCGAT 1 cut(s) 7085
BseJI GATNNNNATC 3 cut(s) 3816, 4248, 6312
BseMI GCAATG 4 cut(s) 4851, 4985, 6702, 7568
BsePI GCGCGC 1 cut(s) 421
BseRI GAGGAG 6 cut(s) 191, 658, 769, 800, 832, 941
BseSI GKGCMC 3 cut(s) 5233, 5551, 6277
BseYI CCCAGC 2 cut(s) 1187, 2715
BsgI GTGCAG 7 cut(s) 3230, 3483, 4104, 4214, 4495, 4584, 4707
Bsh1236I CGCG 9 cut(s) 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078
Bsh1285I CGRYCG 1 cut(s) 219
BshNI GGYRCC 3 cut(s) 598, 1040, 3805
BshVI ATCGAT 1 cut(s) 7085
BsiEI CGRYCG 1 cut(s) 219
BsiHKCI CYCGRG 2 cut(s) 107, 5170
BsmBI CGTCTC 3 cut(s) 1932, 5714, 7442
BsmI GAATGC 5 cut(s) 3540, 5683, 6091, 7508, 7585
BsoBI CYCGRG 2 cut(s) 107, 5170
Bsp119I TTCGAA 1 cut(s) 414
Bsp13I TCCGGA 1 cut(s) 2869
Bsp1407I TGTACA 5 cut(s) 3750, 4324, 5728, 6162, 6327
Bsp1720I GCTNAGC 4 cut(s) 3612, 4128, 5654, 5919
Bsp19I CCATGG 4 cut(s) 1407, 4836, 4991, 5400
BspDI ATCGAT 1 cut(s) 7085
BspEI TCCGGA 1 cut(s) 2869
BspFNI CGCG 9 cut(s) 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078
BspHI TCATGA 2 cut(s) 2022, 6373
BspLI GGNNCC 9 cut(s) 600, 1042, 2650, 2785, 2868, 3807, 5304, 6655, 7376
BspMAI CTGCAG 6 cut(s) 1441, 1983, 2503, 3804, 4542, 4753
BspMI ACCTGC 1 cut(s) 5277
BspOI GCTAGC 1 cut(s) 1362
BspQI GCTCTTC 2 cut(s) 411, 2110
BspT104I TTCGAA 1 cut(s) 414
BspT107I GGYRCC 3 cut(s) 598, 1040, 3805
BsrBI CCGCTC 2 cut(s) 70, 1046
BsrDI GCAATG 4 cut(s) 4851, 4985, 6702, 7568
BsrFI RCCGGY 4 cut(s) 153, 193, 3630, 4725
BsrGI TGTACA 5 cut(s) 3750, 4324, 5728, 6162, 6327
BssAI RCCGGY 4 cut(s) 153, 193, 3630, 4725
BssHII GCGCGC 1 cut(s) 421
BssNAI GTATAC 1 cut(s) 6771
BssNI GRCGYC 2 cut(s) 599, 5372
BssSI CACGAG 4 cut(s) 2580, 3371, 5251, 6132
BssT1I CCWWGG 9 cut(s) 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400
Bst1107I GTATAC 1 cut(s) 6771
Bst2BI CACGAG 4 cut(s) 2580, 3371, 5251, 6132
Bst2UI CCWGG 8 cut(s) 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379
BstACI GRCGYC 2 cut(s) 599, 5372
BstAPI GCANNNNNTGC 6 cut(s) 2303, 5615, 5711, 6057, 6496, 7574
BstAUI TGTACA 5 cut(s) 3750, 4324, 5728, 6162, 6327
BstBAI YACGTR 4 cut(s) 2252, 2411, 4256, 4808
BstBI TTCGAA 1 cut(s) 414
BstDSI CCRYGG 4 cut(s) 1407, 4836, 4991, 5400
BstEII GGTNACC 1 cut(s) 3104
BstENI CCTNNNNNAGG 1 cut(s) 1840
BstFNI CGCG 9 cut(s) 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078
BstH2I RGCGCY 2 cut(s) 602, 7429
BstHHI GCGC 9 cut(s) 145, 423, 425, 601, 1875, 5918, 6695, 7078, 7428
BstMCI CGRYCG 1 cut(s) 219
BstNI CCWGG 8 cut(s) 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379
BstPAI GACNNNNGTC 1 cut(s) 137
BstPI GGTNACC 1 cut(s) 3104
BstSLI GKGCMC 3 cut(s) 5233, 5551, 6277
BstSNI TACGTA 1 cut(s) 4256
BstUI CGCG 9 cut(s) 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078
BstV2I GAAGAC 8 cut(s) 1163, 2207, 2281, 2348, 2560, 4955, 5235, 5450
BstXI CCANNNNNNTGG 1 cut(s) 4992
BstZ17I GTATAC 1 cut(s) 6771
Bsu15I ATCGAT 1 cut(s) 7085
Bsu36I CCTNAGG 2 cut(s) 1200, 4620
BsuI GTATCC 5 cut(s) 442, 1309, 3334, 3873, 5420
BsuTUI ATCGAT 1 cut(s) 7085
BtgI CCRYGG 4 cut(s) 1407, 4836, 4991, 5400
BtgZI GCGATG 2 cut(s) 70, 2468
BtsI GCAGTG 3 cut(s) 481, 2484, 3766
BveI ACCTGC 1 cut(s) 5277
CaiI CAGNNNCTG 5 cut(s) 316, 1396, 4019, 4091, 4322
CciI TCATGA 2 cut(s) 2022, 6373
CfoI GCGC 9 cut(s) 145, 423, 425, 601, 1875, 5918, 6695, 7078, 7428
Cfr10I RCCGGY 4 cut(s) 153, 193, 3630, 4725
ClaI ATCGAT 1 cut(s) 7085
CseI GACGC 6 cut(s) 234, 2342, 5380, 5731, 5831, 5922
CsiI ACCWGGT 1 cut(s) 7377
CspCI CAANNNNNGTGG 2 cut(s) 1448, 1483
DinI GGCGCC 1 cut(s) 600
DraI TTTAAA 3 cut(s) 2832, 3085, 3870
DraIII CACNNNGTG 1 cut(s) 4473
DrdI GACNNNNNNGTC 1 cut(s) 5117
DseDI GACNNNNNNGTC 1 cut(s) 5117
EaeI YGGCCR 2 cut(s) 33, 151
EciI GGCGGA 1 cut(s) 6210
Ecl136II GAGCTC 4 cut(s) 112, 226, 2103, 5658
Eco105I TACGTA 1 cut(s) 4256
Eco130I CCWWGG 9 cut(s) 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400
Eco24I GRGCYC 6 cut(s) 100, 114, 228, 2105, 5305, 5660
Eco32I GATATC 1 cut(s) 1181
Eco53kI GAGCTC 4 cut(s) 112, 226, 2103, 5658
Eco81I CCTNAGG 2 cut(s) 1200, 4620
Eco88I CYCGRG 2 cut(s) 107, 5170
Eco91I GGTNACC 1 cut(s) 3104
EcoICRI GAGCTC 4 cut(s) 112, 226, 2103, 5658
EcoNI CCTNNNNNAGG 1 cut(s) 1840
EcoO109I RGGNCCY 1 cut(s) 2648
EcoO65I GGTNACC 1 cut(s) 3104
EcoRI GAATTC 5 cut(s) 1624, 2838, 2933, 7250, 7331
EcoRII CCWGG 8 cut(s) 30, 1001, 1395, 1768, 1835, 2761, 6362, 7377
EcoRV GATATC 1 cut(s) 1181
EcoT14I CCWWGG 9 cut(s) 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400
EcoT22I ATGCAT 7 cut(s) 4434, 4524, 5683, 6091, 6313, 6538, 6542
EcoT38I GRGCYC 6 cut(s) 100, 114, 228, 2105, 5305, 5660
EgeI GGCGCC 1 cut(s) 600
EheI GGCGCC 1 cut(s) 600
ErhI CCWWGG 9 cut(s) 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400
Esp3I CGTCTC 3 cut(s) 1932, 5714, 7442
FauI CCCGC 4 cut(s) 35, 279, 6753, 7071
FauNDI CATATG 4 cut(s) 2055, 2982, 4355, 4524
FbaI TGATCA 2 cut(s) 1216, 3844
FblI GTMKAC 2 cut(s) 215, 6770
FriOI GRGCYC 6 cut(s) 100, 114, 228, 2105, 5305, 5660
GlaI GCGC 9 cut(s) 144, 422, 424, 600, 1874, 5917, 6694, 7077, 7427
GsaI CCCAGC 2 cut(s) 1191, 2719
GsuI CTGGAG 4 cut(s) 113, 1654, 2865, 3486
HaeII RGCGCY 2 cut(s) 602, 7429
HgaI GACGC 6 cut(s) 234, 2342, 5380, 5731, 5831, 5922
HhaI GCGC 9 cut(s) 145, 423, 425, 601, 1875, 5918, 6695, 7078, 7428
Hin1I GRCGYC 2 cut(s) 599, 5372
Hin6I GCGC 9 cut(s) 143, 421, 423, 599, 1873, 5916, 6693, 7076, 7426
HinP1I GCGC 9 cut(s) 143, 421, 423, 599, 1873, 5916, 6693, 7076, 7426
HincII GTYRAC 6 cut(s) 216, 2223, 3331, 6466, 7322, 7452
HindII GTYRAC 6 cut(s) 216, 2223, 3331, 6466, 7322, 7452
HindIII AAGCTT 2 cut(s) 4782, 7001
HphI GGTGA 8 cut(s) 763, 881, 1943, 2916, 3116, 5021, 5510, 5525
Hpy99I CGWCG 5 cut(s) 143, 193, 224, 250, 253
HpyCH4IV ACGT 9 cut(s) 165, 1168, 2251, 2374, 2410, 4255, 4807, 5455, 6321
HpySE526I ACGT 9 cut(s) 165, 1168, 2251, 2374, 2410, 4255, 4807, 5455, 6321
Hsp92I GRCGYC 2 cut(s) 599, 5372
HspAI GCGC 9 cut(s) 143, 421, 423, 599, 1873, 5916, 6693, 7076, 7426
KasI GGCGCC 1 cut(s) 598
Kpn2I TCCGGA 1 cut(s) 2869
KroI GCCGGC 2 cut(s) 193, 4725
KroNI GCCGGC 2 cut(s) 195, 4727
Ksp22I TGATCA 2 cut(s) 1216, 3844
LguI GCTCTTC 2 cut(s) 411, 2110
MabI ACCWGGT 1 cut(s) 7377
MaeII ACGT 9 cut(s) 165, 1168, 2251, 2374, 2410, 4255, 4807, 5455, 6321
MbiI CCGCTC 2 cut(s) 70, 1046
MfeI CAATTG 6 cut(s) 1815, 2301, 3315, 5666, 6890, 7356
Mly113I GGCGCC 1 cut(s) 599
MlyI GAGTC 4 cut(s) 572, 4019, 4100, 5993
MmeI TCCRAC 7 cut(s) 414, 498, 668, 3175, 3831, 3887, 6181
Mph1103I ATGCAT 7 cut(s) 4434, 4524, 5683, 6091, 6313, 6538, 6542
MroI TCCGGA 1 cut(s) 2869
MroNI GCCGGC 2 cut(s) 193, 4725
MroXI GAANNNNTTC 6 cut(s) 350, 1170, 4918, 5359, 5457, 5520
MspA1I CMGCKG 9 cut(s) 1892, 3437, 4479, 4584, 4664, 5075, 6239, 6776, 7265
MunI CAATTG 6 cut(s) 1815, 2301, 3315, 5666, 6890, 7356
Mva1269I GAATGC 5 cut(s) 3540, 5683, 6091, 7508, 7585
MvaI CCWGG 8 cut(s) 32, 1003, 1397, 1770, 1837, 2763, 6364, 7379
MvnI CGCG 9 cut(s) 38, 143, 423, 425, 892, 3990, 4789, 5916, 7078
NaeI GCCGGC 2 cut(s) 195, 4727
NarI GGCGCC 1 cut(s) 599
NciI CCSGG 3 cut(s) 74, 546, 3648
NcoI CCATGG 4 cut(s) 1407, 4836, 4991, 5400
NdeI CATATG 4 cut(s) 2055, 2982, 4355, 4524
NgoMIV GCCGGC 2 cut(s) 193, 4725
NheI GCTAGC 1 cut(s) 1358
NlaIV GGNNCC 9 cut(s) 600, 1042, 2650, 2785, 2868, 3807, 5304, 6655, 7376
NmeAIII GCCGAG 2 cut(s) 316, 4918
NmuCI GTSAC 6 cut(s) 1007, 1479, 1999, 2893, 3104, 7006
NsiI ATGCAT 7 cut(s) 4434, 4524, 5683, 6091, 6313, 6538, 6542
NspV TTCGAA 1 cut(s) 414
PaeI GCATGC 5 cut(s) 1810, 2446, 6540, 6544, 7577
PagI TCATGA 2 cut(s) 2022, 6373
PauI GCGCGC 1 cut(s) 421
PciI ACATGT 5 cut(s) 1263, 1294, 2147, 7446, 7626
PciSI GCTCTTC 2 cut(s) 411, 2110
PcsI WCGNNNNNNNCGW 5 cut(s) 60, 120, 1710, 4252, 6355
PctI GAATGC 5 cut(s) 3540, 5683, 6091, 7508, 7585
PdiI GCCGGC 2 cut(s) 195, 4727
PdmI GAANNNNTTC 6 cut(s) 350, 1170, 4918, 5359, 5457, 5520
PflFI GACNNNGTC 1 cut(s) 7379
PflMI CCANNNNNTGG 4 cut(s) 1413, 2793, 3521, 7384
PfoI TCCNGGA 1 cut(s) 2761
PleI GAGTC 4 cut(s) 571, 4018, 4100, 5992
PluTI GGCGCC 1 cut(s) 602
PpsI GAGTC 4 cut(s) 571, 4018, 4100, 5992
Ppu21I YACGTR 4 cut(s) 2252, 2411, 4256, 4808
PpuMI RGGWCCY 1 cut(s) 2648
PscI ACATGT 5 cut(s) 1263, 1294, 2147, 7446, 7626
PshAI GACNNNNGTC 1 cut(s) 137
PshBI ATTAAT 2 cut(s) 1454, 7398
PsiI TTATAA 1 cut(s) 6528
Psp124BI GAGCTC 4 cut(s) 114, 228, 2105, 5660
Psp1406I AACGTT 1 cut(s) 165
Psp5II RGGWCCY 1 cut(s) 2648
Psp6I CCWGG 8 cut(s) 30, 1001, 1395, 1768, 1835, 2761, 6362, 7377
PspEI GGTNACC 1 cut(s) 3104
PspFI CCCAGC 2 cut(s) 1187, 2715
PspGI CCWGG 8 cut(s) 30, 1001, 1395, 1768, 1835, 2761, 6362, 7377
PspN4I GGNNCC 9 cut(s) 600, 1042, 2650, 2785, 2868, 3807, 5304, 6655, 7376
PspPPI RGGWCCY 1 cut(s) 2648
PstI CTGCAG 6 cut(s) 1441, 1983, 2503, 3804, 4542, 4753
PstNI CAGNNNCTG 5 cut(s) 316, 1396, 4019, 4091, 4322
PsyI GACNNNGTC 1 cut(s) 7379
PteI GCGCGC 1 cut(s) 421
PvuII CAGCTG 8 cut(s) 1892, 3437, 4479, 4584, 5075, 6239, 6776, 7265
SacI GAGCTC 4 cut(s) 114, 228, 2105, 5660
SalI GTCGAC 1 cut(s) 214
SapI GCTCTTC 2 cut(s) 411, 2110
SchI GAGTC 4 cut(s) 572, 4019, 4100, 5993
SexAI ACCWGGT 1 cut(s) 7377
SfoI GGCGCC 1 cut(s) 600
SfuI TTCGAA 1 cut(s) 414
SmlI CTYRAG 6 cut(s) 962, 2736, 3775, 4421, 5039, 6191
SmoI CTYRAG 6 cut(s) 962, 2736, 3775, 4421, 5039, 6191
SnaBI TACGTA 1 cut(s) 4256
SphI GCATGC 5 cut(s) 1810, 2446, 6540, 6544, 7577
SspDI GGCGCC 1 cut(s) 598
SspI AATATT 2 cut(s) 1366, 2202
SstI GAGCTC 4 cut(s) 114, 228, 2105, 5660
StyI CCWWGG 9 cut(s) 1407, 2652, 3387, 3783, 4075, 4097, 4836, 4991, 5400
TaiI ACGT 9 cut(s) 168, 1171, 2254, 2377, 2413, 4258, 4810, 5458, 6324
TaqII GACCGA 1 cut(s) 4302
TatI WGTACW 9 cut(s) 1125, 2790, 3740, 3750, 4324, 5728, 6162, 6327, 7623
TauI GCSGC 8 cut(s) 38, 70, 1046, 2338, 2417, 3013, 5330, 6782
TseFI GTSAC 6 cut(s) 1007, 1479, 1999, 2893, 3104, 7006
Tsp45I GTSAC 6 cut(s) 1007, 1479, 1999, 2893, 3104, 7006
TspGWI ACGGA 6 cut(s) 177, 2208, 3153, 3348, 3353, 5990
Tth111I GACNNNGTC 1 cut(s) 7379
Van91I CCANNNNNTGG 4 cut(s) 1413, 2793, 3521, 7384
VneI GTGCAC 2 cut(s) 5229, 6273
VspI ATTAAT 2 cut(s) 1454, 7398
XagI CCTNNNNNAGG 1 cut(s) 1840
XbaI TCTAGA 2 cut(s) 1882, 5962
XcmI CCANNNNNNNNNTGG 1 cut(s) 6869
XmiI GTMKAC 2 cut(s) 215, 6770
XmnI GAANNNNTTC 6 cut(s) 350, 1170, 4918, 5359, 5457, 5520
Zsp2I ATGCAT 7 cut(s) 4434, 4524, 5683, 6091, 6313, 6538, 6542
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.