pycom15g13820

Transcription factor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0009533
Physical Location & Seq
Reverse (-)
9433277 .. 9440726
7450 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1410 bp
ATGCAGCCTTGTAGCAGAGAAATGCAAGAAATGAACTCTCTATTGAACGCCTCAGCTTCCGCCTCTCAACTCTCCCTCCAAGATCACCACCACCTCCAACAACAACAATCTCACTCTCACAGCTCCCAGATGCATCCACAAATTCCGAACCCCTCCGCGTCCCACTTCGACTCCGCCACCCACGACGACTTCCTCGAGCAAATGCTCTCCACCCTCGGCCCCTCCTGGGCCTCCGCCGCCGACGACGCCCCGCCTCCGCCCTCCTCCAACCCTGACAATGTCGTCTTCTCCTACGACGACTCCGCCACCCTCGCATCCAAGTTTCGCAGCCAGCAGATCAGCGCCGGTTCCGGCGCTAACAAGTCCGCCTCCGCATCTGCCGCCGCTGCTGCCGCCATGATGCTCCAGCACCAGCTCATGATGTCCAGATCAGGCGCCGCTGACTCCGGCTTCTCTCCCATGGGCTTGTCCTTGCGGAACAACGGAGACTTTGACCGGTCCAACAGCGACGTCGGCGACGTCTCCTCCTTCAAATCCCCAAATACGGGGGGAGGCGATGGGGCTTCTTCTGTTCAATCCCTGTTCAATGGCTTCGGCGGATCACTGCATGGAGCTGCAAATTCTCAGTCTCCCAATTTTCACCACCCTCAGGGAGGTCAGCTGCTGGCGCAGAACTACGGAGGTGCAGGGGCGGCGATGAACCAAGCTCCGGCGGGTGGGTCTGCTGGGGCTGCGCCGGCCCAACCCAAGCCCAGAGTCAGGGCGAGAAGAGGTCAAGCCACTGACCCGCACAGCATAGCCGAAAGATTACGGAGAGAGAGAATTGCAGAGAGAATGAAGGCTCTGCAGGAGCTGGTTCCCAACGCCAACAAGACGGACAAAGCTTCAATGCTGGATGAGATAATCGATTATGTAAAATTCCTCCAGCTCCAAGTCAAGGTTCTGAGCATGAGCAGGTTGGGCGGTGCAGCTGCTGTTGCTCCCCTTGTTGCTGATATGTCCTCTGAGGGTGGCGGTGACTGTATCCAAGCCAGTGCCAACGGCGGGACCCGCGGACGGAGCTCAAACGGTAACCAAACGGCGTCATCATCTAACGACAACAGCATGACGGTGACGGAACACCAGGTCGCGAAGCTCATGGAGGAAGACATGGGCTCCGCCATGCAGTACCTCCAGGGAAAAGGACTCTGCCTCATGCCGATTTCCTTGGCCACCGCCATCTCCACCGCCACGTGTCACTCCAGGAACCCCCTCCTCCAGAACAGCAACAACAACCCGGTCATCCCGTCCAACGGTGGCGACGGGCCATCTTCACCCAGCATGTCCGTGCTGACCGTCCAGTCAGCCACCATGGGTAACGGCGGGGTTGAGGGTTCCGTCAAAGACGCCACCTCCGTTTCCAAGCCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000976 GO:0000981 GO:0001046 GO:0001047 GO:0001067 GO:0001228 GO:0003006 GO:0003674 GO:0003676 GO:0003677 GO:0003690 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006139 GO:0006351 GO:0006355 GO:0006357 GO:0006366 GO:0006725 GO:0006807 GO:0007275 GO:0007276 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009555 GO:0009653 GO:0009888 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010015 GO:0010053 GO:0010054 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010628 GO:0016049 GO:0016070 GO:0018130 GO:0019219 GO:0019222 GO:0019438 GO:0019953 GO:0021700 GO:0022412 GO:0022414 GO:0022622 GO:0030154 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0032501 GO:0032502 GO:0032504 GO:0032774 GO:0034641 GO:0034645 GO:0034654 GO:0040007 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044271 GO:0044424 GO:0044464 GO:0044703 GO:0045893 GO:0045935 GO:0045944 GO:0046483 GO:0048229 GO:0048232 GO:0048235 GO:0048364 GO:0048468 GO:0048469 GO:0048518 GO:0048522 GO:0048588 GO:0048589 GO:0048609 GO:0048731 GO:0048764 GO:0048765 GO:0048767 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051252 GO:0051254 GO:0051704 GO:0055046 GO:0060255 GO:0060560 GO:0065007 GO:0071695 GO:0071704 GO:0080090 GO:0080147 GO:0090304 GO:0090558 GO:0090627 GO:0097159 GO:0097659 GO:0099402 GO:0140110 GO:1901360 GO:1901362 GO:1901363 GO:1901576 GO:1902680 GO:1903506 GO:1903508 GO:1905392 GO:1990837 GO:2000112 GO:2001141
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HLH

Protein Analysis

470

Amino Acids

48.52

Weight (kDa)

6.09

Isoelectric Point (pI)

53.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HLH PF00010 264 - 309 8.4e-10 Helix-loop-helix DNA-binding domain
bHLH_SAC51 PF23173 268 - 312 2.3e-06 Transcription factor SAC51 bHLH domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 281, 1339
AatII GACGTC 2 cut(s) 513, 522
Acc36I ACCTGC 1 cut(s) 945
AccB1I GGYRCC 1 cut(s) 434
AccII CGCG 3 cut(s) 158, 1053, 1130
AclWI GGATC 1 cut(s) 607
AcoI YGGCCR 1 cut(s) 1209
AcsI RAATTY 3 cut(s) 141, 619, 917
AcvI CACGTG 1 cut(s) 1233
AcyI GRCGYC 6 cut(s) 246, 435, 510, 519, 1082, 1386
AfaI GTAC 1 cut(s) 1169
AflIII ACRYGT 1 cut(s) 1232
AgeI ACCGGT 1 cut(s) 495
AgsI TTSAA 5 cut(s) 46, 532, 575, 586, 888
AjnI CCWGG 4 cut(s) 224, 1122, 1173, 1241
AjuI GAANNNNNNNTTGG 2 cut(s) 924, 956
Alw21I GWGCWC 1 cut(s) 1064
Alw26I GTCTC 3 cut(s) 480, 526, 633
AlwI GGATC 1 cut(s) 607
AlwNI CAGNNNCTG 3 cut(s) 664, 853, 974
Ama87I CYCGRG 1 cut(s) 194
AoxI GGCC 5 cut(s) 217, 228, 738, 1209, 1304
ApeKI GCWGC 9 cut(s) 4, 327, 386, 389, 614, 661, 731, 968, 971
ApoI RAATTY 3 cut(s) 141, 619, 917
ArsI GACNNNNNNTTYG 2 cut(s) 611, 643
AsiGI ACCGGT 1 cut(s) 495
AspLEI GCGC 5 cut(s) 344, 356, 437, 670, 736
AspS9I GGNCC 6 cut(s) 218, 228, 498, 739, 1047, 1304
AsuC2I CCSGG 1 cut(s) 1277
AsuHPI GGTGA 5 cut(s) 77, 632, 1028, 1123, 1305
AvaI CYCGRG 1 cut(s) 194
AvaII GGWCC 2 cut(s) 498, 1047
AxyI CCTNAGG 1 cut(s) 648
BalI TGGCCA 1 cut(s) 1211
BanI GGYRCC 1 cut(s) 434
BanII GRGCYC 2 cut(s) 1064, 1157
BbrPI CACGTG 1 cut(s) 1233
BbsI GAAGAC 2 cut(s) 277, 1152
Bbv12I GWGCWC 1 cut(s) 1064
BbvCI CCTCAGC 1 cut(s) 52
BbvI GCAGC 9 cut(s) 16, 339, 373, 376, 601, 648, 718, 958, 980
BccI CCATC 3 cut(s) 551, 1226, 1315
BceAI ACGGC 3 cut(s) 1057, 1095, 1375
BciT130I CCWGG 4 cut(s) 226, 1124, 1175, 1243
BciVI GTATCC 1 cut(s) 1034
BcnI CCSGG 1 cut(s) 1277
BcoDI GTCTC 3 cut(s) 480, 526, 633
BfmI CTRYAG 1 cut(s) 845
BfoI RGCGCY 3 cut(s) 345, 357, 438
BfuAI ACCTGC 1 cut(s) 945
BfuI GTATCC 1 cut(s) 1034
Bme1390I CCNGG 5 cut(s) 226, 1124, 1175, 1243, 1277
Bme18I GGWCC 2 cut(s) 498, 1047
BmeT110I CYCGRG 1 cut(s) 194
BmgT120I GGNCC 6 cut(s) 218, 228, 498, 739, 1047, 1304
BmiI GGNNCC 9 cut(s) 220, 349, 436, 858, 1048, 1049, 1156, 1247, 1375
BmrFI CCNGG 5 cut(s) 226, 1124, 1175, 1243, 1277
BmsI GCATC 5 cut(s) 120, 142, 323, 383, 390
BpiI GAAGAC 2 cut(s) 277, 1152
BpmI CTGGAG 5 cut(s) 389, 908, 1157, 1225, 1241
Bpu10I CCTNAGC 1 cut(s) 52
BpuMI CCSGG 1 cut(s) 1277
Bsa29I ATCGAT 1 cut(s) 906
BsaAI YACGTR 1 cut(s) 1233
BsaHI GRCGYC 6 cut(s) 246, 435, 510, 519, 1082, 1386
BsaJI CCNNGG 7 cut(s) 214, 225, 459, 1051, 1174, 1206, 1350
BsaWI WCCGGW 1 cut(s) 495
Bse118I RCCGGY 3 cut(s) 344, 495, 736
Bse1I ACTGG 2 cut(s) 1032, 1339
Bse21I CCTNAGG 1 cut(s) 648
BseBI CCWGG 4 cut(s) 226, 1124, 1175, 1243
BseCI ATCGAT 1 cut(s) 906
BseDI CCNNGG 7 cut(s) 214, 225, 459, 1051, 1174, 1206, 1350
BseGI GGATG 4 cut(s) 133, 314, 901, 1281
BseMII CTCAG 5 cut(s) 66, 638, 662, 935, 996
BseNI ACTGG 2 cut(s) 1032, 1339
BseRI GAGGAG 3 cut(s) 253, 514, 1244
BseXI GCAGC 9 cut(s) 16, 339, 373, 376, 601, 648, 718, 958, 980
BseYI CCCAGC 2 cut(s) 725, 1316
BsgI GTGCAG 2 cut(s) 705, 987
Bsh1236I CGCG 3 cut(s) 158, 1053, 1130
BshFI GGCC 5 cut(s) 219, 230, 740, 1211, 1306
BshNI GGYRCC 1 cut(s) 434
BshTI ACCGGT 1 cut(s) 495
BshVI ATCGAT 1 cut(s) 906
BsiHKAI GWGCWC 1 cut(s) 1064
BsiHKCI CYCGRG 1 cut(s) 194
BsiSI CCGG 7 cut(s) 345, 351, 447, 496, 710, 737, 1277
BslFI GGGAC 2 cut(s) 145, 1060
BsmAI GTCTC 3 cut(s) 480, 526, 633
BsmBI CGTCTC 1 cut(s) 526
BsmFI GGGAC 2 cut(s) 145, 1060
BsnI GGCC 5 cut(s) 219, 230, 740, 1211, 1306
BsoBI CYCGRG 1 cut(s) 194
Bsp1286I GDGCHC 2 cut(s) 1064, 1157
Bsp143I GATC 4 cut(s) 82, 336, 428, 599
Bsp19I CCATGG 2 cut(s) 459, 1350
Bsp68I TCGCGA 1 cut(s) 1130
BspANI GGCC 5 cut(s) 219, 230, 740, 1211, 1306
BspCNI CTCAG 5 cut(s) 65, 637, 661, 936, 997
BspDI ATCGAT 1 cut(s) 906
BspFNI CGCG 3 cut(s) 158, 1053, 1130
BspHI TCATGA 1 cut(s) 417
BspLI GGNNCC 9 cut(s) 220, 349, 436, 858, 1048, 1049, 1156, 1247, 1375
BspMAI CTGCAG 1 cut(s) 849
BspMI ACCTGC 1 cut(s) 945
BspPI GGATC 1 cut(s) 607
BspT107I GGYRCC 1 cut(s) 434
BsrFI RCCGGY 3 cut(s) 344, 495, 736
BsrI ACTGG 2 cut(s) 1032, 1339
BssAI RCCGGY 3 cut(s) 344, 495, 736
BssECI CCNNGG 7 cut(s) 214, 225, 459, 1051, 1174, 1206, 1350
BssMI GATC 4 cut(s) 82, 336, 428, 599
BssNI GRCGYC 6 cut(s) 246, 435, 510, 519, 1082, 1386
BssT1I CCWWGG 3 cut(s) 459, 1206, 1350
Bst2UI CCWGG 4 cut(s) 226, 1124, 1175, 1243
Bst4CI ACNGT 5 cut(s) 1022, 1070, 1111, 1295, 1336
Bst6I CTCTTC 1 cut(s) 763
BstACI GRCGYC 6 cut(s) 246, 435, 510, 519, 1082, 1386
BstBAI YACGTR 1 cut(s) 1233
BstC8I GCNNGC 3 cut(s) 332, 666, 738
BstDEI CTNAG 5 cut(s) 52, 624, 648, 944, 1005
BstDSI CCRYGG 3 cut(s) 459, 1051, 1350
BstEII GGTNACC 1 cut(s) 1070
BstENI CCTNNNNNAGG 1 cut(s) 651
BstF5I GGATG 4 cut(s) 133, 314, 901, 1281
BstFNI CGCG 3 cut(s) 158, 1053, 1130
BstH2I RGCGCY 3 cut(s) 345, 357, 438
BstHHI GCGC 5 cut(s) 344, 356, 437, 670, 736
BstKTI GATC 4 cut(s) 85, 339, 431, 602
BstMAI GTCTC 3 cut(s) 480, 526, 633
BstMBI GATC 4 cut(s) 82, 336, 428, 599
BstNI CCWGG 4 cut(s) 226, 1124, 1175, 1243
BstNSI RCATGY 1 cut(s) 1324
BstPI GGTNACC 1 cut(s) 1070
BstSCI CCNGG 5 cut(s) 224, 1122, 1173, 1241, 1275
BstSFI CTRYAG 1 cut(s) 845
BstUI CGCG 3 cut(s) 158, 1053, 1130
BstV1I GCAGC 9 cut(s) 16, 339, 373, 376, 601, 648, 718, 958, 980
BstV2I GAAGAC 2 cut(s) 277, 1152
Bsu15I ATCGAT 1 cut(s) 906
Bsu36I CCTNAGG 1 cut(s) 648
BsuI GTATCC 1 cut(s) 1034
BsuRI GGCC 5 cut(s) 219, 230, 740, 1211, 1306
BsuTUI ATCGAT 1 cut(s) 906
BtgI CCRYGG 3 cut(s) 459, 1051, 1350
BtgZI GCGATG 2 cut(s) 570, 710
BtsCI GGATG 4 cut(s) 133, 314, 901, 1281
BtsI GCAGTG 1 cut(s) 602
BtsIMutI CAGTG 3 cut(s) 602, 780, 1039
BtuMI TCGCGA 1 cut(s) 1130
BveI ACCTGC 1 cut(s) 945
Cac8I GCNNGC 3 cut(s) 332, 666, 738
CaiI CAGNNNCTG 3 cut(s) 664, 853, 974
CciI TCATGA 1 cut(s) 417
CfoI GCGC 5 cut(s) 344, 356, 437, 670, 736
Cfr10I RCCGGY 3 cut(s) 344, 495, 736
Cfr13I GGNCC 6 cut(s) 218, 228, 498, 739, 1047, 1304
Cfr42I CCGCGG 1 cut(s) 1054
ClaI ATCGAT 1 cut(s) 906
CseI GACGC 4 cut(s) 147, 254, 1071, 1394
CsiI ACCWGGT 1 cut(s) 1122
Csp6I GTAC 1 cut(s) 1168
CspAI ACCGGT 1 cut(s) 495
CviQI GTAC 1 cut(s) 1168
DdeI CTNAG 5 cut(s) 52, 624, 648, 944, 1005
DinI GGCGCC 1 cut(s) 436
DpnI GATC 4 cut(s) 84, 338, 430, 601
DpnII GATC 4 cut(s) 82, 336, 428, 599
DrdI GACNNNNNNGTC 2 cut(s) 281, 1339
DseDI GACNNNNNNGTC 2 cut(s) 281, 1339
EaeI YGGCCR 1 cut(s) 1209
Eam1104I CTCTTC 1 cut(s) 763
EarI CTCTTC 1 cut(s) 763
EciI GGCGGA 8 cut(s) 49, 163, 223, 246, 292, 355, 612, 1147
Ecl136II GAGCTC 1 cut(s) 1062
Eco130I CCWWGG 3 cut(s) 459, 1206, 1350
Eco24I GRGCYC 2 cut(s) 1064, 1157
Eco47I GGWCC 2 cut(s) 498, 1047
Eco53kI GAGCTC 1 cut(s) 1062
Eco72I CACGTG 1 cut(s) 1233
Eco81I CCTNAGG 1 cut(s) 648
Eco88I CYCGRG 1 cut(s) 194
Eco91I GGTNACC 1 cut(s) 1070
EcoICRI GAGCTC 1 cut(s) 1062
EcoNI CCTNNNNNAGG 1 cut(s) 651
EcoO109I RGGNCCY 1 cut(s) 1047
EcoO65I GGTNACC 1 cut(s) 1070
EcoRII CCWGG 4 cut(s) 224, 1122, 1173, 1241
EcoT14I CCWWGG 3 cut(s) 459, 1206, 1350
EcoT22I ATGCAT 1 cut(s) 135
EcoT38I GRGCYC 2 cut(s) 1064, 1157
EgeI GGCGCC 1 cut(s) 436
EheI GGCGCC 1 cut(s) 436
ErhI CCWWGG 3 cut(s) 459, 1206, 1350
Esp3I CGTCTC 1 cut(s) 526
FaqI GGGAC 2 cut(s) 145, 1060
FauI CCCGC 6 cut(s) 258, 706, 795, 1037, 1058, 1355
FokI GGATG 4 cut(s) 120, 301, 908, 1268
FriOI GRGCYC 2 cut(s) 1064, 1157
GlaI GCGC 5 cut(s) 343, 355, 436, 669, 735
GsaI CCCAGC 2 cut(s) 729, 1320
GsuI CTGGAG 5 cut(s) 389, 908, 1157, 1225, 1241
HaeII RGCGCY 3 cut(s) 345, 357, 438
HaeIII GGCC 5 cut(s) 219, 230, 740, 1211, 1306
HapII CCGG 7 cut(s) 345, 351, 447, 496, 710, 737, 1277
HgaI GACGC 4 cut(s) 147, 254, 1071, 1394
HhaI GCGC 5 cut(s) 344, 356, 437, 670, 736
Hin1I GRCGYC 6 cut(s) 246, 435, 510, 519, 1082, 1386
Hin6I GCGC 5 cut(s) 342, 354, 435, 668, 734
HinP1I GCGC 5 cut(s) 342, 354, 435, 668, 734
HindIII AAGCTT 1 cut(s) 882
HinfI GANTC 5 cut(s) 170, 299, 443, 756, 1185
HpaII CCGG 7 cut(s) 345, 351, 447, 496, 710, 737, 1277
HphI GGTGA 5 cut(s) 77, 632, 1028, 1123, 1305
Hpy188I TCNGA 3 cut(s) 147, 945, 1006
Hpy188III TCNNGA 4 cut(s) 418, 426, 1129, 1258
Hpy99I CGWCG 8 cut(s) 188, 245, 248, 299, 512, 515, 521, 1304
HpyAV CCTTC 2 cut(s) 538, 832
HpyCH4III ACNGT 5 cut(s) 1022, 1070, 1111, 1295, 1336
HpyCH4IV ACGT 3 cut(s) 510, 519, 1232
HpyF3I CTNAG 5 cut(s) 52, 624, 648, 944, 1005
HpySE526I ACGT 3 cut(s) 510, 519, 1232
Hsp92I GRCGYC 6 cut(s) 246, 435, 510, 519, 1082, 1386
HspAI GCGC 5 cut(s) 342, 354, 435, 668, 734
KasI GGCGCC 1 cut(s) 434
KflI GGGWCCC 1 cut(s) 1047
KroI GCCGGC 1 cut(s) 736
KroNI GCCGGC 1 cut(s) 738
KspI CCGCGG 1 cut(s) 1054
Kzo9I GATC 4 cut(s) 82, 336, 428, 599
LmnI GCTCC 9 cut(s) 128, 408, 611, 712, 850, 933, 985, 1059, 1160
Lsp1109I GCAGC 9 cut(s) 16, 339, 373, 376, 601, 648, 718, 958, 980
LweI GCATC 5 cut(s) 120, 142, 323, 383, 390
MabI ACCWGGT 1 cut(s) 1122
MaeII ACGT 3 cut(s) 510, 519, 1232
MaeIII GTNAC 5 cut(s) 1016, 1070, 1111, 1235, 1355
MalI GATC 4 cut(s) 84, 338, 430, 601
MboI GATC 4 cut(s) 82, 336, 428, 599
MboII GAAGA 5 cut(s) 277, 558, 780, 1157, 1302
MhlI GDGCHC 2 cut(s) 1064, 1157
MlsI TGGCCA 1 cut(s) 1211
MluCI AATT 5 cut(s) 141, 619, 634, 822, 917
MluNI TGGCCA 1 cut(s) 1211
Mly113I GGCGCC 1 cut(s) 435
MlyI GAGTC 5 cut(s) 164, 293, 437, 765, 1179
MmeI TCCRAC 4 cut(s) 121, 291, 525, 1314
Mox20I TGGCCA 1 cut(s) 1211
Mph1103I ATGCAT 1 cut(s) 135
MroNI GCCGGC 1 cut(s) 736
MscI TGGCCA 1 cut(s) 1211
MslI CAYNNNNRTG 2 cut(s) 1109, 1325
Msp20I TGGCCA 1 cut(s) 1211
MspA1I CMGCKG 5 cut(s) 386, 440, 661, 971, 1053
MspI CCGG 7 cut(s) 345, 351, 447, 496, 710, 737, 1277
MspR9I CCNGG 5 cut(s) 226, 1124, 1175, 1243, 1277
MvaI CCWGG 4 cut(s) 226, 1124, 1175, 1243
MvnI CGCG 3 cut(s) 158, 1053, 1130
NaeI GCCGGC 1 cut(s) 738
NarI GGCGCC 1 cut(s) 435
NciI CCSGG 1 cut(s) 1277
NcoI CCATGG 2 cut(s) 459, 1350
NdeII GATC 4 cut(s) 82, 336, 428, 599
NgoMIV GCCGGC 1 cut(s) 736
NlaIV GGNNCC 9 cut(s) 220, 349, 436, 858, 1048, 1049, 1156, 1247, 1375
NmeAIII GCCGAG 1 cut(s) 195
NmuCI GTSAC 3 cut(s) 1016, 1111, 1235
NruI TCGCGA 1 cut(s) 1130
NsiI ATGCAT 1 cut(s) 135
NspI RCATGY 1 cut(s) 1324
PaeR7I CTCGAG 1 cut(s) 194
PagI TCATGA 1 cut(s) 417
PcsI WCGNNNNNNNCGW 3 cut(s) 192, 516, 1392
PdiI GCCGGC 1 cut(s) 738
PflFI GACNNNGTC 1 cut(s) 278
PfoI TCCNGGA 1 cut(s) 1241
PinAI ACCGGT 1 cut(s) 495
PleI GAGTC 5 cut(s) 164, 293, 437, 764, 1179
PluTI GGCGCC 1 cut(s) 438
PmaCI CACGTG 1 cut(s) 1233
PmlI CACGTG 1 cut(s) 1233
PpsI GAGTC 5 cut(s) 164, 293, 437, 764, 1179
Ppu21I YACGTR 1 cut(s) 1233
PpuMI RGGWCCY 1 cut(s) 1047
Psp124BI GAGCTC 1 cut(s) 1064
Psp5II RGGWCCY 1 cut(s) 1047
Psp6I CCWGG 4 cut(s) 224, 1122, 1173, 1241
PspCI CACGTG 1 cut(s) 1233
PspEI GGTNACC 1 cut(s) 1070
PspFI CCCAGC 2 cut(s) 725, 1316
PspGI CCWGG 4 cut(s) 224, 1122, 1173, 1241
PspN4I GGNNCC 9 cut(s) 220, 349, 436, 858, 1048, 1049, 1156, 1247, 1375
PspPI GGNCC 6 cut(s) 218, 228, 498, 739, 1047, 1304
PspPPI RGGWCCY 1 cut(s) 1047
PspXI VCTCGAGB 1 cut(s) 194
PstI CTGCAG 1 cut(s) 849
PstNI CAGNNNCTG 3 cut(s) 664, 853, 974
PsyI GACNNNGTC 1 cut(s) 278
PvuII CAGCTG 2 cut(s) 661, 971
RruI TCGCGA 1 cut(s) 1130
RsaI GTAC 1 cut(s) 1169
RsaNI GTAC 1 cut(s) 1168
RseI CAYNNNNRTG 2 cut(s) 1109, 1325
SacI GAGCTC 1 cut(s) 1064
SacII CCGCGG 1 cut(s) 1054
Sau3AI GATC 4 cut(s) 82, 336, 428, 599
Sau96I GGNCC 6 cut(s) 218, 228, 498, 739, 1047, 1304
SchI GAGTC 5 cut(s) 164, 293, 437, 765, 1179
ScrFI CCNGG 5 cut(s) 226, 1124, 1175, 1243, 1277
SduI GDGCHC 2 cut(s) 1064, 1157
SexAI ACCWGGT 1 cut(s) 1122
SfaNI GCATC 5 cut(s) 120, 142, 323, 383, 390
SfcI CTRYAG 1 cut(s) 845
SfoI GGCGCC 1 cut(s) 436
Sfr274I CTCGAG 1 cut(s) 194
Sfr303I CCGCGG 1 cut(s) 1054
SgrBI CCGCGG 1 cut(s) 1054
SinI GGWCC 2 cut(s) 498, 1047
SlaI CTCGAG 1 cut(s) 194
SmiMI CAYNNNNRTG 2 cut(s) 1109, 1325
SmlI CTYRAG 1 cut(s) 194
SmoI CTYRAG 1 cut(s) 194
Sse9I AATT 5 cut(s) 141, 619, 634, 822, 917
SspDI GGCGCC 1 cut(s) 434
SstI GAGCTC 1 cut(s) 1064
StyD4I CCNGG 5 cut(s) 224, 1122, 1173, 1241, 1275
StyI CCWWGG 3 cut(s) 459, 1206, 1350
TaaI ACNGT 5 cut(s) 1022, 1070, 1111, 1295, 1336
TaiI ACGT 3 cut(s) 513, 522, 1235
TaqI TCGA 3 cut(s) 168, 195, 906
TasI AATT 5 cut(s) 141, 619, 634, 822, 917
TauI GCSGC 6 cut(s) 239, 383, 386, 395, 440, 695
TscAI CASTG 3 cut(s) 609, 787, 1039
TseFI GTSAC 3 cut(s) 1016, 1111, 1235
TseI GCWGC 9 cut(s) 4, 327, 386, 389, 614, 661, 731, 968, 971
Tsp45I GTSAC 3 cut(s) 1016, 1111, 1235
TspDTI ATGAA 3 cut(s) 47, 713, 851
TspGWI ACGGA 9 cut(s) 498, 693, 826, 890, 1072, 1130, 1315, 1366, 1384
TspRI CASTG 3 cut(s) 609, 787, 1039
Tth111I GACNNNGTC 1 cut(s) 278
VpaK11BI GGWCC 2 cut(s) 498, 1047
XagI CCTNNNNNAGG 1 cut(s) 651
XapI RAATTY 3 cut(s) 141, 619, 917
XceI RCATGY 1 cut(s) 1324
XhoI CTCGAG 1 cut(s) 194
ZraI GACGTC 2 cut(s) 511, 520
Zsp2I ATGCAT 1 cut(s) 135
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.