pycom15g13910
ERF Family

Calcineurin-like metallo-phosphoesterase superfamily protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0010859
Physical Location & Seq
Forward (+)
9485200 .. 9487704
2505 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 786 bp
ATGGGGAAAAAACCCAGTTGGGTTCCTACAGTGGTAACGCAGGTGAGTCTCTGCTTTTGTCTCTACCTTGCTTTTCAGCTGGGTCAGCCTTGGAGCTCTGTCCGCCATGGCAGAAGTGAGACGAGGCCGCTGGATATTTACTTCATCAGCGTCGGGGGAGGATTCCGGCCTCCCACCGGACAGACCCATCTTCTCAAACAGGGTACCCTGCATTTCTCATCACTGAAGGTTCCCTGGTACACCACCCGAGTTTCAGAAGGAAAAGGCAGAGCTTACTTCCAAAAGATGATTAAGTTACCTTGCGAGAAGACCTTGGATGTCATTGTGGTGGATACTGGATTATTACTGGTGAAGAATTTGACCGTGGGTTCATTAAGCGAAGTTGGAAACAATCAATTACATTGGCTCAGAAGGACACTGGAGACAACCGGTAGTAACTGGCGCATAGTCGTTGGATTTCATCCGCTGGCTATTTGTGAAGATGTTGAGGACAGAATGGAAGCAAAGCAAGTTTTCGATTCTCTACGAAGTACTTTTACAAAATTTGAAGTGAATGCATACCTAAGTGGGCAGGGTTGCGCTAGCAGCACCGGATTAAGTAGTCTGAGCTACATCAGGAACCCAGGCAAAATGGCAGCACCCTCTGCCCGATTGCGCAGGAAATTGGAAGACGGGTTTCTTCTCCACAGAGTCAGCTCATTAGAGATTGAAACCTACATTGTTACATCAGCTGGAGAAGTTGTGCATAAATCTGTACTCCATCAGAGAGGAAAGGAGATCATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

262

Amino Acids

29.17

Weight (kDa)

9.57

Isoelectric Point (pI)

34.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0010859)

Species Orthologous Gene IDs
arabidopsis_thaliana AT4G30993 AT4G30993 AT4G30993
fragaria_vesca FvH4_1g01190 FvH4_1g01190
malus_domestica MD02G1010000.v1.1 MD02G1010100.v1.1
prunus_persica Prupe.7G260000_v2.0.a1
pyrus_communis pycom02g00880 pycom15g13910
rosa_chinensis RchiOBHm_Chr2g0085991
rosa_laevigata RLG00000015732
rosa_multiflora Rmu_ssc0000355.1_g000024
rosa_roxburghii Rroxscaffold_2G00154870
rosa_rugosa Rorug01G0464900
rosa_samantha Rh2AG014100 Rh2BG014600 Rh2CG015100 Rh2DG016400
rosa_wichuraiana Rw2G001250

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 31
Acc16I TGCGCA 1 cut(s) 656
Acc36I ACCTGC 1 cut(s) 31
Acc65I GGTACC 1 cut(s) 203
AccB1I GGYRCC 1 cut(s) 203
AciI CCGC 3 cut(s) 103, 128, 464
AcsI RAATTY 2 cut(s) 355, 542
AcuI CTGAAG 1 cut(s) 245
AfaI GTAC 4 cut(s) 205, 239, 532, 756
AfiI CCNNNNNNNGG 1 cut(s) 176
AgeI ACCGGT 1 cut(s) 428
AgsI TTSAA 2 cut(s) 548, 710
AjnI CCWGG 2 cut(s) 233, 622
AluBI AGCT 6 cut(s) 79, 96, 272, 609, 696, 731
AluI AGCT 6 cut(s) 79, 96, 272, 609, 696, 731
Alw21I GWGCWC 1 cut(s) 98
Alw26I GTCTC 4 cut(s) 53, 65, 113, 416
Ama87I CYCGRG 1 cut(s) 246
AoxI GGCC 2 cut(s) 125, 167
ApeKI GCWGC 2 cut(s) 585, 635
ApoI RAATTY 2 cut(s) 355, 542
AsiGI ACCGGT 1 cut(s) 428
Asp718I GGTACC 1 cut(s) 203
AspLEI GCGC 3 cut(s) 444, 581, 657
AsuHPI GGTGA 2 cut(s) 55, 361
AsuNHI GCTAGC 1 cut(s) 581
AvaI CYCGRG 1 cut(s) 246
BanI GGYRCC 1 cut(s) 203
BanII GRGCYC 1 cut(s) 98
BarI GAAGNNNNNNTAC 2 cut(s) 520, 552
BbsI GAAGAC 2 cut(s) 314, 675
Bbv12I GWGCWC 1 cut(s) 98
BbvI GCAGC 2 cut(s) 597, 647
BccI CCATC 2 cut(s) 195, 768
BciT130I CCWGG 2 cut(s) 235, 624
BciVI GTATCC 1 cut(s) 325
BcoDI GTCTC 4 cut(s) 53, 65, 113, 416
BfaI CTAG 1 cut(s) 582
BfmI CTRYAG 1 cut(s) 27
BfuAI ACCTGC 1 cut(s) 31
BfuI GTATCC 1 cut(s) 325
BisI GCNGC 3 cut(s) 128, 586, 636
BlsI GCNGC 3 cut(s) 129, 587, 637
BmcAI AGTACT 1 cut(s) 532
Bme1390I CCNGG 2 cut(s) 235, 624
BmeT110I CYCGRG 1 cut(s) 246
BmiI GGNNCC 4 cut(s) 24, 205, 231, 620
BmrFI CCNGG 2 cut(s) 235, 624
BmrI ACTGGG 1 cut(s) 9
BmtI GCTAGC 1 cut(s) 585
BmuI ACTGGG 1 cut(s) 9
BpiI GAAGAC 2 cut(s) 314, 675
BpmI CTGGAG 2 cut(s) 440, 753
BsaJI CCNNGG 6 cut(s) 89, 106, 233, 312, 363, 622
BsaWI WCCGGW 3 cut(s) 176, 428, 590
BsaXI ACNNNNNCTCC 3 cut(s) 726, 756, 767
Bsc4I CCNNNNNNNGG 1 cut(s) 176
Bse118I RCCGGY 1 cut(s) 428
Bse1I ACTGG 5 cut(s) 15, 340, 351, 423, 443
BseBI CCWGG 2 cut(s) 235, 624
BseDI CCNNGG 6 cut(s) 89, 106, 233, 312, 363, 622
BseGI GGATG 2 cut(s) 322, 460
BseLI CCNNNNNNNGG 1 cut(s) 176
BseMII CTCAG 2 cut(s) 421, 596
BseNI ACTGG 5 cut(s) 15, 340, 351, 423, 443
BseXI GCAGC 2 cut(s) 597, 647
BseYI CCCAGC 1 cut(s) 79
BshFI GGCC 2 cut(s) 127, 169
BshNI GGYRCC 1 cut(s) 203
BshTI ACCGGT 1 cut(s) 428
BsiHKAI GWGCWC 1 cut(s) 98
BsiHKCI CYCGRG 1 cut(s) 246
BsiSI CCGG 4 cut(s) 166, 177, 429, 591
BslI CCNNNNNNNGG 1 cut(s) 176
BsmAI GTCTC 4 cut(s) 53, 65, 113, 416
BsmBI CGTCTC 1 cut(s) 113
BsmI GAATGC 1 cut(s) 559
BsnI GGCC 2 cut(s) 127, 169
BsoBI CYCGRG 1 cut(s) 246
Bsp1286I GDGCHC 1 cut(s) 98
Bsp143I GATC 1 cut(s) 777
Bsp19I CCATGG 1 cut(s) 106
BspACI CCGC 3 cut(s) 103, 128, 464
BspANI GGCC 2 cut(s) 127, 169
BspCNI CTCAG 2 cut(s) 420, 597
BspLI GGNNCC 4 cut(s) 24, 205, 231, 620
BspMI ACCTGC 1 cut(s) 31
BspOI GCTAGC 1 cut(s) 585
BspT107I GGYRCC 1 cut(s) 203
BsrFI RCCGGY 1 cut(s) 428
BsrI ACTGG 5 cut(s) 15, 340, 351, 423, 443
BssAI RCCGGY 1 cut(s) 428
BssECI CCNNGG 6 cut(s) 89, 106, 233, 312, 363, 622
BssMI GATC 1 cut(s) 777
BssT1I CCWWGG 3 cut(s) 89, 106, 312
Bst2UI CCWGG 2 cut(s) 235, 624
Bst4CI ACNGT 2 cut(s) 31, 364
BstAPI GCANNNNNTGC 1 cut(s) 644
BstC8I GCNNGC 2 cut(s) 468, 583
BstDEI CTNAG 3 cut(s) 407, 563, 605
BstDSI CCRYGG 2 cut(s) 106, 363
BstF5I GGATG 2 cut(s) 322, 460
BstHHI GCGC 3 cut(s) 444, 581, 657
BstKTI GATC 1 cut(s) 780
BstMAI GTCTC 4 cut(s) 53, 65, 113, 416
BstMBI GATC 1 cut(s) 777
BstMWI GCNNNNNNNGC 4 cut(s) 85, 102, 585, 644
BstNI CCWGG 2 cut(s) 235, 624
BstSCI CCNGG 2 cut(s) 233, 622
BstSFI CTRYAG 1 cut(s) 27
BstV1I GCAGC 2 cut(s) 597, 647
BstV2I GAAGAC 2 cut(s) 314, 675
BsuI GTATCC 1 cut(s) 325
BsuRI GGCC 2 cut(s) 127, 169
BtgI CCRYGG 2 cut(s) 106, 363
BtsCI GGATG 2 cut(s) 322, 460
BtsIMutI CAGTG 3 cut(s) 36, 221, 416
BveI ACCTGC 1 cut(s) 31
Cac8I GCNNGC 2 cut(s) 468, 583
CfoI GCGC 3 cut(s) 444, 581, 657
Cfr10I RCCGGY 1 cut(s) 428
CseI GACGC 1 cut(s) 139
Csp6I GTAC 4 cut(s) 204, 238, 531, 755
CspAI ACCGGT 1 cut(s) 428
CviAII CATG 2 cut(s) 107, 781
CviQI GTAC 4 cut(s) 204, 238, 531, 755
DdeI CTNAG 3 cut(s) 407, 563, 605
DpnI GATC 1 cut(s) 779
DpnII GATC 1 cut(s) 777
EciI GGCGGA 1 cut(s) 92
Ecl136II GAGCTC 1 cut(s) 96
Eco130I CCWWGG 3 cut(s) 89, 106, 312
Eco24I GRGCYC 1 cut(s) 98
Eco53kI GAGCTC 1 cut(s) 96
Eco57I CTGAAG 1 cut(s) 245
Eco88I CYCGRG 1 cut(s) 246
EcoICRI GAGCTC 1 cut(s) 96
EcoRII CCWGG 2 cut(s) 233, 622
EcoT14I CCWWGG 3 cut(s) 89, 106, 312
EcoT22I ATGCAT 1 cut(s) 559
EcoT38I GRGCYC 1 cut(s) 98
ErhI CCWWGG 3 cut(s) 89, 106, 312
Esp3I CGTCTC 1 cut(s) 113
FaeI CATG 2 cut(s) 110, 784
FaiI YATR 5 cut(s) 108, 446, 559, 747, 782
FatI CATG 2 cut(s) 106, 780
Fnu4HI GCNGC 3 cut(s) 128, 586, 636
FokI GGATG 2 cut(s) 329, 447
FriOI GRGCYC 1 cut(s) 98
Fsp4HI GCNGC 3 cut(s) 128, 586, 636
FspBI CTAG 1 cut(s) 582
FspI TGCGCA 1 cut(s) 656
GlaI GCGC 3 cut(s) 443, 580, 656
GluI GCNGC 3 cut(s) 128, 586, 636
GsaI CCCAGC 1 cut(s) 83
GsuI CTGGAG 2 cut(s) 440, 753
HaeIII GGCC 2 cut(s) 127, 169
HapII CCGG 4 cut(s) 166, 177, 429, 591
HgaI GACGC 1 cut(s) 139
HhaI GCGC 3 cut(s) 444, 581, 657
Hin1II CATG 2 cut(s) 110, 784
Hin6I GCGC 3 cut(s) 442, 579, 655
HinP1I GCGC 3 cut(s) 442, 579, 655
HinfI GANTC 4 cut(s) 46, 162, 518, 690
HpaII CCGG 4 cut(s) 166, 177, 429, 591
HphI GGTGA 2 cut(s) 55, 361
Hpy166II GTNNAC 1 cut(s) 240
Hpy188I TCNGA 4 cut(s) 256, 410, 606, 765
Hpy188III TCNNGA 1 cut(s) 616
Hpy8I GTNNAC 1 cut(s) 240
Hpy99I CGWCG 1 cut(s) 155
HpyAV CCTTC 3 cut(s) 220, 251, 405
HpyCH4III ACNGT 2 cut(s) 31, 364
HpyCH4V TGCA 3 cut(s) 211, 557, 745
HpyF10VI GCNNNNNNNGC 4 cut(s) 85, 102, 585, 644
HpyF3I CTNAG 3 cut(s) 407, 563, 605
Hsp92II CATG 2 cut(s) 110, 784
HspAI GCGC 3 cut(s) 442, 579, 655
KpnI GGTACC 1 cut(s) 207
Kzo9I GATC 1 cut(s) 777
LmnI GCTCC 1 cut(s) 93
Lsp1109I GCAGC 2 cut(s) 597, 647
MaeI CTAG 1 cut(s) 582
MaeIII GTNAC 4 cut(s) 34, 294, 434, 721
MalI GATC 1 cut(s) 779
MboI GATC 1 cut(s) 777
MboII GAAGA 6 cut(s) 182, 319, 364, 491, 671, 680
MhlI GDGCHC 1 cut(s) 98
MluCI AATT 4 cut(s) 355, 395, 542, 662
MlyI GAGTC 2 cut(s) 55, 699
MmeI TCCRAC 2 cut(s) 364, 433
MnlI CCTC 6 cut(s) 117, 152, 180, 481, 652, 761
Mph1103I ATGCAT 1 cut(s) 559
MseI TTAA 3 cut(s) 291, 374, 596
MslI CAYNNNNRTG 1 cut(s) 326
MspA1I CMGCKG 4 cut(s) 79, 130, 466, 731
MspI CCGG 4 cut(s) 166, 177, 429, 591
MspR9I CCNGG 2 cut(s) 235, 624
Mva1269I GAATGC 1 cut(s) 559
MvaI CCWGG 2 cut(s) 235, 624
MwoI GCNNNNNNNGC 4 cut(s) 85, 102, 585, 644
NcoI CCATGG 1 cut(s) 106
NdeII GATC 1 cut(s) 777
NheI GCTAGC 1 cut(s) 581
NlaIII CATG 2 cut(s) 110, 784
NlaIV GGNNCC 4 cut(s) 24, 205, 231, 620
NsbI TGCGCA 1 cut(s) 656
NsiI ATGCAT 1 cut(s) 559
PaqCI CACCTGC 1 cut(s) 31
PctI GAATGC 1 cut(s) 559
PfeI GAWTC 2 cut(s) 162, 518
PinAI ACCGGT 1 cut(s) 428
PkrI GCNGC 3 cut(s) 129, 587, 637
PleI GAGTC 2 cut(s) 54, 698
PpsI GAGTC 2 cut(s) 54, 698
Psp124BI GAGCTC 1 cut(s) 98
Psp6I CCWGG 2 cut(s) 233, 622
PspFI CCCAGC 1 cut(s) 79
PspGI CCWGG 2 cut(s) 233, 622
PspN4I GGNNCC 4 cut(s) 24, 205, 231, 620
PvuII CAGCTG 2 cut(s) 79, 731
RsaI GTAC 4 cut(s) 205, 239, 532, 756
RsaNI GTAC 4 cut(s) 204, 238, 531, 755
RseI CAYNNNNRTG 1 cut(s) 326
SacI GAGCTC 1 cut(s) 98
SaqAI TTAA 3 cut(s) 291, 374, 596
SatI GCNGC 3 cut(s) 128, 586, 636
Sau3AI GATC 1 cut(s) 777
ScaI AGTACT 1 cut(s) 532
SchI GAGTC 2 cut(s) 55, 699
ScrFI CCNGG 2 cut(s) 235, 624
SduI GDGCHC 1 cut(s) 98
SfcI CTRYAG 1 cut(s) 27
SmiMI CAYNNNNRTG 1 cut(s) 326
Sse9I AATT 4 cut(s) 355, 395, 542, 662
SsiI CCGC 3 cut(s) 103, 128, 464
SspMI CTAG 1 cut(s) 582
SstI GAGCTC 1 cut(s) 98
StyD4I CCNGG 2 cut(s) 233, 622
StyI CCWWGG 3 cut(s) 89, 106, 312
TaaI ACNGT 2 cut(s) 31, 364
TaqI TCGA 1 cut(s) 516
TasI AATT 4 cut(s) 355, 395, 542, 662
TatI WGTACW 2 cut(s) 530, 754
TauI GCSGC 1 cut(s) 130
TfiI GAWTC 2 cut(s) 162, 518
Tru1I TTAA 3 cut(s) 291, 374, 596
Tru9I TTAA 3 cut(s) 291, 374, 596
TscAI CASTG 3 cut(s) 36, 228, 423
TseI GCWGC 2 cut(s) 585, 635
TspDTI ATGAA 3 cut(s) 133, 360, 449
TspRI CASTG 3 cut(s) 36, 228, 423
XapI RAATTY 2 cut(s) 355, 542
XspI CTAG 1 cut(s) 582
ZrmI AGTACT 1 cut(s) 532
Zsp2I ATGCAT 1 cut(s) 559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.