pycom15g16260
ERF Family

Belongs to the ABC transporter superfamily. ABCG family. PDR (TC 3.A.1.205) subfamily

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Reverse (-)
11388295 .. 11395717
7423 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom15g16260.7

Sequence Viewer

Length: 4257 bp
ATGTGGAACTCGGCGGAGAATGTGTTCGCGAGATCGGCGTCGTTTCGGGAGGTAGGGGAGGATGAGGAGGAGCTGCGTTGGGCCGCGTTGGAGAGGCTCCCGACCTACGCTCGCGCCCGCCGCGGCATTTTCAGGAACGTCGCCGGAGACACTATGGAGATCGACGTCGGCGAGCTCGAGGCCAAGGAGCAGAAGCTCCTCCTTGACCGTCTCATTAGCTCCGCTGACGACGACCCCAAGCAATTCTTCAATCGCATGCGCCGTAGATTTGACGCAGTAAAATTGGACTTTCCGAAAATCGAGGTCCGATTTCAGAACGTGAAGGTTGAAACTTTCGTCCACGTGGGAAGCAGAGCGCTGCCGACTATTCCCAATTTTGTTTTAAATATGACGGAGGCCCTTTTTAGGCAATTGCGAATATACAGGGGGCAGAGAAGCAAATTAACGATTTTAGACAACGTTAGCGGGATAATAAGACCTTCAAGGTTGACGTTACTATTGGGTGCACCAAGCTCCGGAAAGACTACGCTACTATTGGCTCTTGCTGGACGCCTGGGAGCAGGTTTGCAGACGTCAGGGAACGTCACGTATAATGGACATCGCTTAAAGGAGTTTGTTCCTCAGCGGACATCTGCTTATGTCAGCCAACAGGATTGGCACGCAGCAGAGATGACTGTAAGGGAAACTCTTGAGTTTGCAGGACGATGTCAAGGTGTTGGATTCAAATATGATATGTTATTAGAGCTTGCAAGAAGGGAAAAGAGAGATGGGATAAAACCCGATGAAGATCTTGATATATTTATGAAGTCATTAGCTCTTGGGGGGAAGGAGACAAACCTTGTGGTGGAGTACATCATGAAGATTTTAGGGTTGGACATATGTGCTGATACCTTGGTAGGAGATGAAATGCTCAAAGGAATCTCAGGGGGTCAAAAGAAGCGGCTTACTACAGGTGAATTATTAGTAGGTCCGGCAAGAGTTCTGTTCATGGATGATATTTCGACTGGTCTTGATAGTTCAACTACTTATCAAATCATCAAATATCTAAGGCATTCAACTCGGGCACTAGATTCAACCACTGTCATATCTTTGCTTCAACCTGCTCCAGAGACCTACGAGTTGTTTGATGATGTTATACTTATGTGTGAGGGCCAAATTGTGTATCAGGGACCCCGCGAAACAGCTCTTGATTTTTTTTCATATATGGGATTTAGATGTCCACAGAGAAAGAATGTGGCAGACTTCTTGCAAGAAGTTATATCAGAGAAGGACCAAGAGCAGTACTGGTCCAATTCTGATCTCCAGTACCGCTATGTTTCACCGGCAAAGTTTGTTGACGCTTATCGTTTATTTCAAGCTGGGAAGACTTTGTCTGAAGAACTAGAAGTTCCTTTTGATAAACGCTATAACCATCCTGCAGCTTTAGCAACGTTTCTCTATGGCATGAAGAGGTGTGAGCTTCTCAAAACAAGCTTTAACTGGCAACTTCTACTCATGAAGCGAAATGCATTTATCTATGCTTTCAAGTTCATTCAGCTTCTTTTGGTTGCTATGATCACAATGAGTGTTTTTTTCCGGTCAACATTACACCACAAGACAATTGATGATGGAGGCCTATATCTCGGTGCTCTATACTTTTCCATGGTTATTATTCTTTTCAATGGCTTCATGGAGGTGTCAATGTTGGTGGCCAAGCTTCCGGTACTTTACAAGCATAGGGACTTGCACTTCTACCCTAGCTGGGTCTATACCATTCCGTCCTGGGTCTTAAGTGTTCCAAATTCATCCATAGAGTCTGGCTTGTGGGTGGCAATCACATACTATGTCATTGGATTTGATCCTTCAATTACTAGATTCTGTGGGCAGTTCTTGATATTTTTCTTGCTACACCAGATGTCAATAGCTCTCTTCCGTCTTATTGGATCCTTGGGTCGAAATATGATAGTCGCTAACACTTTTGGATCTTTTGCCATGTTAGTTGTTATGGGTCTTGGAGGATACGTCATCTCAAGAGATCGTGTACCAAAGTGGTGGATATGGGGTTTCTGGGTGTCTCCCTTGATGTATGCTCAAAATGCAGCTTCCGTAAATGAATTTCTTGGACATAAATGGGATAAGAGAGTTGGAAACGAGACCATTCCGTTAGGTGAGGCATTGCTAAAAGCACGCAGTTTGTTTCCACAGAGCTACTGGTATTGGATTGGTGCTGGTGCTTTGCTTGGATATGCAGTTCTATTCAACGTCCTCTTCACATTCTTCCTAGCTTACCTTAATCCCTTGGGGAAACGACAAGCCGTAGTCACTAAGGACGAGCTTCAAGACAGAGAAAGGAGAAGAAAAGGAGAAACTGTTGTTATTGAGCTGAGAGAGTACTTGCAGCATTCAGAGTCATTAAATGGAAAATATTTTAAGCAGAGAGGAATGGTGCTCCCATTTCAACAACTTTCCATGTCTTTCAGCAATATCAATTACTATGTCGATGTCCCTCTGGAATTGAAGCAGCAGGGCATTCAAGAAGAGAAATTGCAGTTGTTGAGTAATGTCACTGGCGCATTTAGGCCCGGGGTGCTTACAGCATTGGTTGGAGTAAGTGGTGCTGGGAAAACCACCCTCATGGACGTATTAGCTGGTCGAAAAACCGGTGGGATGATTGAAGGGAGCATTCATATATCTGGTTACCCAAAGAGACAAGAAACTTTTGCGAGAATTTCTGGTTACTGTGAGCAGTCCGATATTCATTCCCCCTGCTTGACTGTTCTGGAATCACTTCTCTTCTCTGTTTGGCTTCGATTACCATCAGATGTTGACTTGGAGACACAGAGGGCGTTTGTAGAAGAGGTGATGGAACTGGTGGAGCTCACTCCATTAAGTGGGGCATTGGTTGGTCTACCGGGGGTAGATGGTTTGTCGACAGAACAGCGAAAAAGGCTAACGATAGCCGTTGAGCTGGTCGCCAACCCCTCTATAGTGTTCATGGATGAACCCACATCAGGGTTGGATGCACGGTCTGCAGCTATTGTGATGAGGACTGTGAGGAATATAGTCAATACTGGGCGCACTATAGTGTGCACAATCCACCAGCCTAGCATAGACATCTTTGAATCCTTTGATGAACTTCTATTTTTGAAGCGTGGAGGAGAGCTCATATATGCTGGTCCACTTGGTCCCAGGTCTTGTGAACTCATTAAATACTTTGAGGCAGTCGAAGGAGTAGAAAAGATCAGGCCTGGATATAATCCAGCCACATGGATGCTTGATGTTACTTCTACAGTTGAAGAAAGTCGTCTCGGGGTGGATTTTGCAGAAGTTTACCGAAGATCTAACTTGTTTCAACGTAATAAAGAGTTGGTTGAAAACCTAAGCAAACCAAGCGCCAATTCGAAAGAAATAAACTTTCCAAGCAAGTACTCTCAGTCATTTGTCGAACAATTTCTCACTTGTCTTTGGAAGCAAAATCTGTCTTACTGGCGAAACCCTCAGTACACTGCAGTTCGCTTTTTTTATACAGTCATCATCTCGTTGATGTTGGGAACAATTTGTTGGAAATTCGGAGATAAGAGGGAGACCCAGCAGGATCTGTTAAACGCTATGGGGTCCATGTATGCAGCAATCCTATTTAGCGGAATCACCAATGCCAGTGCTGTTCAACCTGTTGTTTCTGTGGAACGATTTGTTTCATATCGAGAGAGAGCTGCTGGGATGTACTCGGCCTTACCATTTGCATTTGCTCAGATCGTAATAGAGCTCCCTTACGTGTTTGCACAAGCGATTATCTACTGCGCAATTTTTTACTACACGGCCTCATTTGAGTGGACTCTTTTCAAGTTTCTTTGGTACATATTCTTTATGTACTTCACAATGCTATACTTCACCTTCTATGGAATGATGACAATCGCTGTCACGCCAAATCATAATGTCGCAGCTATAATTGCTGCTCCGATTTATATGCTGTGGAACCTCTTCAGCGGCTTTATGATTCCTCACAAGAGAATTCCAATCTGGTGGAGATGGTATTACTGGGCGGACCCTATCGCCTGGAGTCTGTACGGCCTCTTTGTTTCACAGTACGGCGAGGATGACAGTCTTGTGAAGCTAGCTGATGGAATCCAAATGCCTGTAAGGCAGTTGCTCGAAGTAGGGTTTGGTTACAAGCATGATTTTCTGGGTGTAGCCGGCATTGTGGTGGTCGGTTTCTGCGTGTTTTTCGCCTTAGTTTTTGCCTTTGCAATAAAAGCATTCAACTTCCAGAGGAGATGA

Protein Analysis

1419

Amino Acids

161.68

Weight (kDa)

8.42

Isoelectric Point (pI)

40.02

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 168, 575
Acc16I TGCGCA 1 cut(s) 3781
Acc36I ACCTGC 2 cut(s) 551, 1108
AccB7I CCANNNNNTGG 1 cut(s) 2870
AccI GTMKAC 2 cut(s) 2887, 2909
AccII CGCG 5 cut(s) 29, 86, 114, 123, 1176
AccIII TCCGGA 1 cut(s) 515
AclI AACGTT 2 cut(s) 459, 1430
AclWI GGATC 5 cut(s) 1832, 1917, 1930, 1969, 3582
AcoI YGGCCR 1 cut(s) 1689
AcsI RAATTY 5 cut(s) 1780, 2093, 2706, 3545, 3990
AcuI CTGAAG 2 cut(s) 1395, 3946
AcvI CACGTG 1 cut(s) 343
AcyI GRCGYC 4 cut(s) 38, 165, 550, 572
AfeI AGCGCT 1 cut(s) 357
AfiI CCNNNNNNNGG 7 cut(s) 405, 515, 844, 1741, 2870, 2990, 2991
AflII CTTAAG 1 cut(s) 1768
AflIII ACRYGT 1 cut(s) 3753
AgeI ACCGGT 1 cut(s) 2639
AjnI CCWGG 5 cut(s) 552, 1760, 3167, 3226, 4034
AjuI GAANNNNNNNTTGG 8 cut(s) 230, 262, 3361, 3393, 3523, 3555, 4125, 4157
AleI CACNNNNGTG 1 cut(s) 3062
AloI GAACNNNNNNTCC 4 cut(s) 8, 40, 2214, 2246
Alw21I GWGCWC 8 cut(s) 177, 508, 1630, 2430, 2859, 3071, 3144, 3747
Alw44I GTGCAC 2 cut(s) 504, 3067
AlwI GGATC 5 cut(s) 1832, 1917, 1930, 1969, 3582
AlwNI CAGNNNCTG 1 cut(s) 3577
Ama87I CYCGRG 4 cut(s) 176, 1059, 2561, 3287
Aor13HI TCCGGA 1 cut(s) 515
Aor51HI AGCGCT 1 cut(s) 357
ApaLI GTGCAC 2 cut(s) 504, 3067
ApoI RAATTY 5 cut(s) 1780, 2093, 2706, 3545, 3990
AsiGI ACCGGT 1 cut(s) 2639
Asp700I GAANNNNTTC 4 cut(s) 23, 2766, 3429, 3959
AspLEI GCGC 7 cut(s) 116, 261, 358, 2552, 3057, 3374, 3782
AsuC2I CCSGG 3 cut(s) 2562, 2563, 2892
AsuHPI GGTGA 6 cut(s) 965, 1311, 2159, 2851, 3619, 3862
AsuII TTCGAA 1 cut(s) 3380
AsuNHI GCTAGC 1 cut(s) 4093
AvaI CYCGRG 4 cut(s) 176, 1059, 2561, 3287
AvaII GGWCC 9 cut(s) 304, 968, 1169, 1270, 1287, 3155, 3164, 3594, 4024
BaeGI GKGCMC 3 cut(s) 508, 1066, 3071
BaeI ACNNNNGTAYC 2 cut(s) 879, 912
BalI TGGCCA 1 cut(s) 1691
BamHI GGATCC 1 cut(s) 1922
BanII GRGCYC 4 cut(s) 177, 2859, 3144, 3747
BbrPI CACGTG 1 cut(s) 343
BbsI GAAGAC 1 cut(s) 1370
Bbv12I GWGCWC 8 cut(s) 177, 508, 1630, 2430, 2859, 3071, 3144, 3747
BbvCI CCTCAGC 1 cut(s) 621
BccI CCATC 8 cut(s) 761, 1419, 1601, 2803, 2836, 2894, 4002, 4094
BceAI ACGGC 6 cut(s) 246, 2279, 2924, 3813, 4063, 4084
BcgI CGANNNNNNTGC 4 cut(s) 1040, 1074, 3928, 3962
BciT130I CCWGG 5 cut(s) 554, 1762, 3169, 3228, 4036
BciVI GTATCC 1 cut(s) 1991
BcnI CCSGG 3 cut(s) 2562, 2563, 2892
BfaI CTAG 7 cut(s) 1067, 1382, 1737, 1851, 2261, 3084, 4094
BfmI CTRYAG 7 cut(s) 948, 1416, 2964, 3009, 3060, 3267, 3486
BfoI RGCGCY 2 cut(s) 359, 3375
BfrI CTTAAG 1 cut(s) 1768
BfuAI ACCTGC 2 cut(s) 551, 1108
BfuI GTATCC 1 cut(s) 1991
BglI GCCNNNNNGGC 1 cut(s) 4120
BglII AGATCT 2 cut(s) 787, 3317
BmcAI AGTACT 3 cut(s) 1283, 2372, 3407
Bme1390I CCNGG 8 cut(s) 554, 1762, 2562, 2563, 2892, 3169, 3228, 4036
Bme18I GGWCC 9 cut(s) 304, 968, 1169, 1270, 1287, 3155, 3164, 3594, 4024
BmeT110I CYCGRG 4 cut(s) 176, 1059, 2561, 3287
BmiI GGNNCC 8 cut(s) 98, 1170, 1171, 1924, 3166, 3595, 3956, 4026
BmrFI CCNGG 8 cut(s) 554, 1762, 2562, 2563, 2892, 3169, 3228, 4036
BmrI ACTGGG 2 cut(s) 3060, 4027
BmsI GCATC 2 cut(s) 2989, 3240
BmtI GCTAGC 1 cut(s) 4097
BmuI ACTGGG 2 cut(s) 3060, 4027
BpiI GAAGAC 1 cut(s) 1370
BplI GAGNNNNNCTC 2 cut(s) 3126, 3158
BpmI CTGGAG 3 cut(s) 1089, 1286, 4057
Bpu10I CCTNAGC 2 cut(s) 621, 3359
Bpu14I TTCGAA 1 cut(s) 3380
BpuEI CTTGAG 2 cut(s) 710, 1993
BpuMI CCSGG 3 cut(s) 2562, 2563, 2892
BsaAI YACGTR 3 cut(s) 343, 588, 3754
BsaBI GATNNNNATC 3 cut(s) 786, 2794, 3890
BsaHI GRCGYC 4 cut(s) 38, 165, 550, 572
BsaI GGTCTC 3 cut(s) 1103, 2126, 3557
BsaWI WCCGGW 4 cut(s) 515, 1575, 1699, 2639
BsaXI ACNNNNNCTCC 6 cut(s) 8, 38, 1986, 2016, 2334, 2364
Bsc4I CCNNNNNNNGG 7 cut(s) 405, 515, 844, 1741, 2870, 2990, 2991
Bse118I RCCGGY 3 cut(s) 1321, 2639, 4172
Bse3DI GCAATG 1 cut(s) 2153
Bse8I GATNNNNATC 3 cut(s) 786, 2794, 3890
BseAI TCCGGA 1 cut(s) 515
BseBI CCWGG 5 cut(s) 554, 1762, 3169, 3228, 4036
BseJI GATNNNNATC 3 cut(s) 786, 2794, 3890
BseLI CCNNNNNNNGG 7 cut(s) 405, 515, 844, 1741, 2870, 2990, 2991
BseMI GCAATG 1 cut(s) 2153
BseMII CTCAG 6 cut(s) 635, 936, 2354, 3425, 3491, 3743
BseRI GAGGAG 4 cut(s) 80, 83, 188, 3150
BseSI GKGCMC 3 cut(s) 508, 1066, 3071
BseYI CCCAGC 5 cut(s) 1358, 1740, 2597, 3567, 3695
Bsh1236I CGCG 5 cut(s) 29, 86, 114, 123, 1176
BshTI ACCGGT 1 cut(s) 2639
BsiHKAI GWGCWC 8 cut(s) 177, 508, 1630, 2430, 2859, 3071, 3144, 3747
BsiHKCI CYCGRG 4 cut(s) 176, 1059, 2561, 3287
BslFI GGGAC 4 cut(s) 1182, 1733, 2468, 3150
BslI CCNNNNNNNGG 7 cut(s) 405, 515, 844, 1741, 2870, 2990, 2991
BsmBI CGTCTC 2 cut(s) 215, 3290
BsmFI GGGAC 4 cut(s) 1182, 1733, 2468, 3150
BsmI GAATGC 5 cut(s) 1051, 2380, 2508, 2661, 4235
Bso31I GGTCTC 3 cut(s) 1103, 2126, 3557
BsoBI CYCGRG 4 cut(s) 176, 1059, 2561, 3287
Bsp119I TTCGAA 1 cut(s) 3380
Bsp1286I GDGCHC 9 cut(s) 177, 508, 1066, 1630, 2430, 2859, 3071, 3144, 3747
Bsp13I TCCGGA 1 cut(s) 515
Bsp19I CCATGG 1 cut(s) 1641
Bsp68I TCGCGA 1 cut(s) 29
BspCNI CTCAG 6 cut(s) 634, 935, 2355, 3424, 3490, 3742
BspEI TCCGGA 1 cut(s) 515
BspFNI CGCG 5 cut(s) 29, 86, 114, 123, 1176
BspHI TCATGA 2 cut(s) 855, 1494
BspLI GGNNCC 8 cut(s) 98, 1170, 1171, 1924, 3166, 3595, 3956, 4026
BspMAI CTGCAG 3 cut(s) 1420, 3013, 3490
BspMI ACCTGC 2 cut(s) 551, 1108
BspOI GCTAGC 1 cut(s) 4097
BspPI GGATC 5 cut(s) 1832, 1917, 1930, 1969, 3582
BspT104I TTCGAA 1 cut(s) 3380
BspTI CTTAAG 1 cut(s) 1768
BspTNI GGTCTC 3 cut(s) 1103, 2126, 3557
BsrDI GCAATG 1 cut(s) 2153
BsrFI RCCGGY 3 cut(s) 1321, 2639, 4172
BssAI RCCGGY 3 cut(s) 1321, 2639, 4172
BssNI GRCGYC 4 cut(s) 38, 165, 550, 572
BssT1I CCWWGG 5 cut(s) 183, 891, 1641, 1926, 2277
Bst2UI CCWGG 5 cut(s) 554, 1762, 3169, 3228, 4036
Bst6I CTCTTC 7 cut(s) 1442, 1913, 2252, 2511, 2777, 2829, 3965
BstACI GRCGYC 4 cut(s) 38, 165, 550, 572
BstAFI CTTAAG 1 cut(s) 1768
BstAPI GCANNNNNTGC 1 cut(s) 3008
BstBAI YACGTR 3 cut(s) 343, 588, 3754
BstBI TTCGAA 1 cut(s) 3380
BstC8I GCNNGC 9 cut(s) 112, 118, 173, 257, 660, 747, 2167, 4095, 4174
BstDSI CCRYGG 2 cut(s) 121, 1641
BstEII GGTNACC 1 cut(s) 2675
BstFNI CGCG 5 cut(s) 29, 86, 114, 123, 1176
BstH2I RGCGCY 2 cut(s) 359, 3375
BstHHI GCGC 7 cut(s) 116, 261, 358, 2552, 3057, 3374, 3782
BstNI CCWGG 5 cut(s) 554, 1762, 3169, 3228, 4036
BstNSI RCATGY 1 cut(s) 259
BstPI GGTNACC 1 cut(s) 2675
BstSCI CCNGG 8 cut(s) 552, 1760, 2560, 2561, 2890, 3167, 3226, 4034
BstSFI CTRYAG 7 cut(s) 948, 1416, 2964, 3009, 3060, 3267, 3486
BstSLI GKGCMC 3 cut(s) 508, 1066, 3071
BstUI CGCG 5 cut(s) 29, 86, 114, 123, 1176
BstV2I GAAGAC 1 cut(s) 1370
BstX2I RGATCY 5 cut(s) 787, 1922, 1961, 3317, 3574
BstXI CCANNNNNNTGG 4 cut(s) 2031, 2614, 3246, 4002
BstYI RGATCY 5 cut(s) 787, 1922, 1961, 3317, 3574
BsuI GTATCC 1 cut(s) 1991
BtgI CCRYGG 2 cut(s) 121, 1641
BtgZI GCGATG 1 cut(s) 584
BtsI GCAGTG 1 cut(s) 3483
BtsIMutI CAGTG 4 cut(s) 1077, 2544, 3483, 3643
BtuMI TCGCGA 1 cut(s) 29
BveI ACCTGC 2 cut(s) 551, 1108
Cac8I GCNNGC 9 cut(s) 112, 118, 173, 257, 660, 747, 2167, 4095, 4174
CaiI CAGNNNCTG 1 cut(s) 3577
CciI TCATGA 2 cut(s) 855, 1494
CfoI GCGC 7 cut(s) 116, 261, 358, 2552, 3057, 3374, 3782
Cfr10I RCCGGY 3 cut(s) 1321, 2639, 4172
Cfr42I CCGCGG 1 cut(s) 124
Cfr9I CCCGGG 1 cut(s) 2561
CseI GACGC 4 cut(s) 27, 281, 558, 1346
CspAI ACCGGT 1 cut(s) 2639
CspCI CAANNNNNGTGG 4 cut(s) 822, 857, 1668, 1703
DraI TTTAAA 1 cut(s) 384
EaeI YGGCCR 1 cut(s) 1689
Eam1104I CTCTTC 7 cut(s) 1442, 1913, 2252, 2511, 2777, 2829, 3965
EarI CTCTTC 7 cut(s) 1442, 1913, 2252, 2511, 2777, 2829, 3965
EciI GGCGGA 2 cut(s) 29, 4037
Ecl136II GAGCTC 4 cut(s) 175, 2857, 3142, 3745
Eco130I CCWWGG 5 cut(s) 183, 891, 1641, 1926, 2277
Eco147I AGGCCT 2 cut(s) 1614, 3226
Eco24I GRGCYC 4 cut(s) 177, 2859, 3144, 3747
Eco31I GGTCTC 3 cut(s) 1103, 2126, 3557
Eco47I GGWCC 9 cut(s) 304, 968, 1169, 1270, 1287, 3155, 3164, 3594, 4024
Eco47III AGCGCT 1 cut(s) 357
Eco53kI GAGCTC 4 cut(s) 175, 2857, 3142, 3745
Eco57I CTGAAG 2 cut(s) 1395, 3946
Eco72I CACGTG 1 cut(s) 343
Eco88I CYCGRG 4 cut(s) 176, 1059, 2561, 3287
Eco91I GGTNACC 1 cut(s) 2675
EcoICRI GAGCTC 4 cut(s) 175, 2857, 3142, 3745
EcoO109I RGGNCCY 2 cut(s) 397, 1169
EcoO65I GGTNACC 1 cut(s) 2675
EcoRI GAATTC 1 cut(s) 3990
EcoRII CCWGG 5 cut(s) 552, 1760, 3167, 3226, 4034
EcoT14I CCWWGG 5 cut(s) 183, 891, 1641, 1926, 2277
EcoT22I ATGCAT 1 cut(s) 1510
EcoT38I GRGCYC 4 cut(s) 177, 2859, 3144, 3747
ErhI CCWWGG 5 cut(s) 183, 891, 1641, 1926, 2277
Esp3I CGTCTC 2 cut(s) 215, 3290
FalI AAGNNNNNCTT 2 cut(s) 230, 262
FaqI GGGAC 4 cut(s) 1182, 1733, 2468, 3150
FauI CCCGC 3 cut(s) 125, 458, 1181
FauNDI CATATG 1 cut(s) 878
FbaI TGATCA 1 cut(s) 1554
FblI GTMKAC 2 cut(s) 2887, 2909
FriOI GRGCYC 4 cut(s) 177, 2859, 3144, 3747
FspBI CTAG 7 cut(s) 1067, 1382, 1737, 1851, 2261, 3084, 4094
FspI TGCGCA 1 cut(s) 3781
GlaI GCGC 7 cut(s) 115, 260, 357, 2551, 3056, 3373, 3781
GsaI CCCAGC 5 cut(s) 1362, 1744, 2601, 3571, 3699
GsuI CTGGAG 3 cut(s) 1089, 1286, 4057
HaeII RGCGCY 2 cut(s) 359, 3375
HgaI GACGC 4 cut(s) 27, 281, 558, 1346
HhaI GCGC 7 cut(s) 116, 261, 358, 2552, 3057, 3374, 3782
Hin1I GRCGYC 4 cut(s) 38, 165, 550, 572
Hin6I GCGC 7 cut(s) 114, 259, 356, 2550, 3055, 3372, 3780
HinP1I GCGC 7 cut(s) 114, 259, 356, 2550, 3055, 3372, 3780
HincII GTYRAC 5 cut(s) 489, 1336, 1581, 2806, 2910
HindII GTYRAC 5 cut(s) 489, 1336, 1581, 2806, 2910
HindIII AAGCTT 2 cut(s) 1471, 1694
HphI GGTGA 6 cut(s) 965, 1311, 2159, 2851, 3619, 3862
Hpy99I CGWCG 5 cut(s) 43, 143, 167, 170, 233
HpyAV CCTTC 9 cut(s) 316, 489, 747, 820, 1261, 1851, 2648, 3200, 3883
Hsp92I GRCGYC 4 cut(s) 38, 165, 550, 572
HspAI GCGC 7 cut(s) 114, 259, 356, 2550, 3055, 3372, 3780
KflI GGGWCCC 1 cut(s) 1169
Kpn2I TCCGGA 1 cut(s) 515
KroI GCCGGC 1 cut(s) 4172
KroNI GCCGGC 1 cut(s) 4174
Ksp22I TGATCA 1 cut(s) 1554
KspI CCGCGG 1 cut(s) 124
LweI GCATC 2 cut(s) 2989, 3240
MaeI CTAG 7 cut(s) 1067, 1382, 1737, 1851, 2261, 3084, 4094
MaeIII GTNAC 9 cut(s) 492, 583, 2299, 2542, 2675, 2714, 3259, 3898, 4145
MfeI CAATTG 2 cut(s) 410, 1599
MflI RGATCY 5 cut(s) 787, 1922, 1961, 3317, 3574
MhlI GDGCHC 9 cut(s) 177, 508, 1066, 1630, 2430, 2859, 3071, 3144, 3747
MlsI TGGCCA 1 cut(s) 1691
MluNI TGGCCA 1 cut(s) 1691
MlyI GAGTC 4 cut(s) 1802, 2396, 3808, 4048
MmeI TCCRAC 7 cut(s) 69, 697, 852, 2104, 2563, 2976, 3521
Mox20I TGGCCA 1 cut(s) 1691
Mph1103I ATGCAT 1 cut(s) 1510
MroI TCCGGA 1 cut(s) 515
MroNI GCCGGC 1 cut(s) 4172
MroXI GAANNNNTTC 4 cut(s) 23, 2766, 3429, 3959
MscI TGGCCA 1 cut(s) 1691
MslI CAYNNNNRTG 6 cut(s) 1673, 2612, 3062, 3248, 3808, 4181
Msp20I TGGCCA 1 cut(s) 1691
MspA1I CMGCKG 4 cut(s) 123, 224, 625, 3966
MspCI CTTAAG 1 cut(s) 1768
MspR9I CCNGG 8 cut(s) 554, 1762, 2562, 2563, 2892, 3169, 3228, 4036
MunI CAATTG 2 cut(s) 410, 1599
Mva1269I GAATGC 5 cut(s) 1051, 2380, 2508, 2661, 4235
MvaI CCWGG 5 cut(s) 554, 1762, 3169, 3228, 4036
MvnI CGCG 5 cut(s) 29, 86, 114, 123, 1176
NaeI GCCGGC 1 cut(s) 4174
NciI CCSGG 3 cut(s) 2562, 2563, 2892
NcoI CCATGG 1 cut(s) 1641
NdeI CATATG 1 cut(s) 878
NgoMIV GCCGGC 1 cut(s) 4172
NheI GCTAGC 1 cut(s) 4093
NlaIV GGNNCC 8 cut(s) 98, 1170, 1171, 1924, 3166, 3595, 3956, 4026
NmeAIII GCCGAG 1 cut(s) 3686
NmuCI GTSAC 4 cut(s) 583, 2299, 2542, 3898
NruI TCGCGA 1 cut(s) 29
NsbI TGCGCA 1 cut(s) 3781
NsiI ATGCAT 1 cut(s) 1510
NspI RCATGY 1 cut(s) 259
NspV TTCGAA 1 cut(s) 3380
OliI CACNNNNGTG 1 cut(s) 3062
PaeI GCATGC 1 cut(s) 259
PaeR7I CTCGAG 1 cut(s) 176
PagI TCATGA 2 cut(s) 855, 1494
PceI AGGCCT 2 cut(s) 1614, 3226
PcsI WCGNNNNNNNCGW 4 cut(s) 168, 174, 259, 4194
PctI GAATGC 5 cut(s) 1051, 2380, 2508, 2661, 4235
PdiI GCCGGC 1 cut(s) 4174
PdmI GAANNNNTTC 4 cut(s) 23, 2766, 3429, 3959
PfeI GAWTC 9 cut(s) 720, 918, 1070, 1854, 2762, 3101, 3624, 3976, 4104
PflFI GACNNNGTC 2 cut(s) 705, 1369
PflMI CCANNNNNTGG 1 cut(s) 2870
PinAI ACCGGT 1 cut(s) 2639
PleI GAGTC 4 cut(s) 1801, 2395, 3808, 4047
PmaCI CACGTG 1 cut(s) 343
PmlI CACGTG 1 cut(s) 343
PpsI GAGTC 4 cut(s) 1801, 2395, 3808, 4047
Ppu21I YACGTR 3 cut(s) 343, 588, 3754
PpuMI RGGWCCY 1 cut(s) 1169
Psp124BI GAGCTC 4 cut(s) 177, 2859, 3144, 3747
Psp1406I AACGTT 2 cut(s) 459, 1430
Psp5II RGGWCCY 1 cut(s) 1169
Psp6I CCWGG 5 cut(s) 552, 1760, 3167, 3226, 4034
PspCI CACGTG 1 cut(s) 343
PspEI GGTNACC 1 cut(s) 2675
PspFI CCCAGC 5 cut(s) 1358, 1740, 2597, 3567, 3695
PspGI CCWGG 5 cut(s) 552, 1760, 3167, 3226, 4034
PspN4I GGNNCC 8 cut(s) 98, 1170, 1171, 1924, 3166, 3595, 3956, 4026
PspPPI RGGWCCY 1 cut(s) 1169
PspXI VCTCGAGB 1 cut(s) 176
PstI CTGCAG 3 cut(s) 1420, 3013, 3490
PstNI CAGNNNCTG 1 cut(s) 3577
PsuI RGATCY 5 cut(s) 787, 1922, 1961, 3317, 3574
PsyI GACNNNGTC 2 cut(s) 705, 1369
RruI TCGCGA 1 cut(s) 29
RseI CAYNNNNRTG 6 cut(s) 1673, 2612, 3062, 3248, 3808, 4181
SacI GAGCTC 4 cut(s) 177, 2859, 3144, 3747
SacII CCGCGG 1 cut(s) 124
SalI GTCGAC 1 cut(s) 2908
ScaI AGTACT 3 cut(s) 1283, 2372, 3407
SchI GAGTC 4 cut(s) 1802, 2396, 3808, 4048
ScrFI CCNGG 8 cut(s) 554, 1762, 2562, 2563, 2892, 3169, 3228, 4036
SduI GDGCHC 9 cut(s) 177, 508, 1066, 1630, 2430, 2859, 3071, 3144, 3747
SfaNI GCATC 2 cut(s) 2989, 3240
SfcI CTRYAG 7 cut(s) 948, 1416, 2964, 3009, 3060, 3267, 3486
Sfr274I CTCGAG 1 cut(s) 176
Sfr303I CCGCGG 1 cut(s) 124
SfuI TTCGAA 1 cut(s) 3380
SgrBI CCGCGG 1 cut(s) 124
SinI GGWCC 9 cut(s) 304, 968, 1169, 1270, 1287, 3155, 3164, 3594, 4024
SlaI CTCGAG 1 cut(s) 176
SmaI CCCGGG 1 cut(s) 2563
SmiMI CAYNNNNRTG 6 cut(s) 1673, 2612, 3062, 3248, 3808, 4181
SmlI CTYRAG 4 cut(s) 176, 689, 1768, 2008
SmoI CTYRAG 4 cut(s) 176, 689, 1768, 2008
SphI GCATGC 1 cut(s) 259
SseBI AGGCCT 2 cut(s) 1614, 3226
SspI AATATT 1 cut(s) 2405
SspMI CTAG 7 cut(s) 1067, 1382, 1737, 1851, 2261, 3084, 4094
SstI GAGCTC 4 cut(s) 177, 2859, 3144, 3747
StuI AGGCCT 2 cut(s) 1614, 3226
StyD4I CCNGG 8 cut(s) 552, 1760, 2560, 2561, 2890, 3167, 3226, 4034
StyI CCWWGG 5 cut(s) 183, 891, 1641, 1926, 2277
TatI WGTACW 7 cut(s) 849, 1281, 2370, 3405, 3480, 3702, 3849
TauI GCSGC 5 cut(s) 86, 123, 126, 943, 3969
TfiI GAWTC 9 cut(s) 720, 918, 1070, 1854, 2762, 3101, 3624, 3976, 4104
TscAI CASTG 4 cut(s) 1084, 2551, 3490, 3643
TseFI GTSAC 4 cut(s) 583, 2299, 2542, 3898
Tsp45I GTSAC 4 cut(s) 583, 2299, 2542, 3898
TspGWI ACGGA 5 cut(s) 407, 1746, 1901, 2074, 2130
TspMI CCCGGG 1 cut(s) 2561
TspRI CASTG 4 cut(s) 1084, 2551, 3490, 3643
Tth111I GACNNNGTC 2 cut(s) 705, 1369
Van91I CCANNNNNTGG 1 cut(s) 2870
Vha464I CTTAAG 1 cut(s) 1768
VneI GTGCAC 2 cut(s) 504, 3067
VpaK11BI GGWCC 9 cut(s) 304, 968, 1169, 1270, 1287, 3155, 3164, 3594, 4024
XapI RAATTY 5 cut(s) 1780, 2093, 2706, 3545, 3990
XceI RCATGY 1 cut(s) 259
XcmI CCANNNNNNNNNTGG 2 cut(s) 2187, 2992
XhoI CTCGAG 1 cut(s) 176
XmaI CCCGGG 1 cut(s) 2561
XmiI GTMKAC 2 cut(s) 2887, 2909
XmnI GAANNNNTTC 4 cut(s) 23, 2766, 3429, 3959
XspI CTAG 7 cut(s) 1067, 1382, 1737, 1851, 2261, 3084, 4094
ZraI GACGTC 2 cut(s) 166, 573
ZrmI AGTACT 3 cut(s) 1283, 2372, 3407
Zsp2I ATGCAT 1 cut(s) 1510
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.