pycom15g18080

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
OG0012559
Physical Location & Seq
Reverse (-)
12829442 .. 12832660
3219 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 3048 bp
ATGGAATGTGGCTTAATTGGTGTTGGAATGTCACCTGCTTTCCGGAGGCTCTTGTTGCCAATTTCCCAAAATCCCTCGCTTCGATTGCAGAACAAGCTTAGTCCAGTTTCCAGGTCGCTATCGCTTCAATTAAAGCCTTTGTCTTGTGCTGCTTTGGATGTGATTGACTCGAATCTCATCAGTGATTCGTGTCTCGAAAGTGCCCCAAACTCTGAGACTCAGCTTCGTCAAGTAAGATTAGATAATGGCTATTCACCTGACCAGGAAATTGTAGGAAGCAATGTGAAAACCACGCCTCTAGTTTTCGATACCAAAAAGAGGCTTATGCATTATTCTGGGATGCTTCGTACCTGTGTTTCGCTAAGGTCTTTGAATGAGGGGAAGGCTATTCATGGACAGGTGATAAAAGAAGGGATTGATCCGGATTCGCATTTGTGGGTTTCATTGGTTAATGTTTATGCAAAGTGTGGGGACTCCGGGTATGCACGCAAAGTGCTTGATGTGATGCCTGAAAGAGACGTTGTGTCGTGGACTTCTTTAATTCAGGGGTTTGTAGTCGAAGGTTCTGGTGTTGACGCTGTTAAATTGTTCTGTGAGATGAAGAAAGATGGTACAAAAGCAAATGACTTTGCATTGGCAACTGGGTTGAAAGCATGTTCTTTGTGCTCCGATTTAGGCTTTGGGAAACAGTTGCATGCTGAAGCAGTGAAACTGGGGTTGTTATCGGATGCTTTTGTTGGTTCTGCTCTAGTTGGTCTTTATGCAAAATGTGGTGATATGGAACTTGCAGATAGAGTGTTATTTTGTATGCCTGAGCAGGATGTGGTATCATGGAATGCACTGCTGAATGGGTATGCTCAGGAAGGTGACGGAAAAAAAGCTTTGGCATTGTTCTGCAGAATGACTGAATCAGAAATGAGGTTGAGCAAGTCCACCTTGTCCACTGTCCTCAAAGGTTGTGCAAACTCAGGAAATTTGAGCGGAGGTCAGTTTTTGCATTCTCTAGTTGTCAAAATTGGGTTTCAGATAGATGAATTCTTGGGTTGCAGTCTTGTTGATATGTATTCAAAGTGTGGGATGGCAGTCGATGCGGTAAAAGCATTCAGGATGATTGAAAATCCTGATGTAGTGGCCTGGAGTGCAATTATCTCATGCCTTGATCAACAAGGGCAATCGCAAGAAGTGCCTCAGCTATTTCGTGAAATGATAAGTACAGGCATCTCACCAAATAAATTTACCCTTTCTAGTATCATTAGTGCTGCCACTGATCTCGGAGACCTTCATTTTGGTGAAAGTATCCATGCTTTTTCATGGAAATATGGTTGTGAAGCTGATATTTCAGTCAGCAATGCTCTAATCACAATGTATATGAAAAGCGGGCGTTTGCTTGATGGTGCTCAGGTTTTTGAGGCAATGACAAACCCTGATTTGATTTCATGGAATGCCCTTTTATCTGGAGCACACAATTATGAATTATCTGACCTAGGGCCAAGAGTCTTCCACCAAATGCTTGTCGAAGGTTTGAAGCCCAACATGTACTCATTCATTAGTGTTTTAAGGTCTTGCTCTAGCCTCTTGGACGTGGGCCTTGGAAAACAAATACATTCCCATATTATCAAAACTAACCTCGATGATAATGACTTTGTTGGGACAGCTCTCATTGACATGTATGCCAAAGGCAGGTTCGTGGAAGATGCTGTGAAAGCTTTCAATAGATTGAGTAATCGAGACCTCTTCACTTGGACAGTCATCATTACTGGTTATGCCCAAACTGATAAAGCAGAGGAATCTGTTGCTTGCTTCAATAAGATGCAAGAAGAAGGCGTGAAGCCAAACGAGTTCAGCATCGCTGGCTGTTTGAGTGCTTGCTCCCGCACAGCTATGCTGGAAAATGGGCGGCAGCTCCACTCAATGGTAATTAAGAGTGGGCATCTGGAAGATTTGTTTGTTACTAGTGCTCTTGTTGATATGTATGCAAAATGTGGGTGCATAAGTGATGCTGAGGATATCTTTGAGGGCTTGGTTTCACGAGATACAGTGTCATGGAATATTATGGTGTGTGGATATTCCCAATATGGGCAAGGAGAGAAGGCTCTTGAAGCCTTTTCAACAATGTTGGATGAAGGTGCCATACCAAATGAGATCACCTTCATTGGTGTTCTTTCTGCATGCAGCCACCTGGGTCTAGTCGAAGAAGGGAAAAAGCACTTCGACTCACTGAGCAATGTTTTCGGGATCACTCCTACAATTGAGCATTATGCTTGTATGGTTGATATTCTCGGCAGGTCTGGAAAGTTTAATGAGATTGAAACCTTTATCGAGACAAAGGAACTAACACCATATGCTATTATTTGGGAGACTGTTCTTGGGGCTTGTAAGATGCATGGAAATGTTGAATTTGGTGAAACAGCAGCAAGAAGGCTTTTTGAGCTTAAACCTGAGATGGATTCAACATATATCTTGCTATCTAATATCTTTGCAGTCAAGGGCAGGTGGGACGATGTTAACAAAGTCAGGAAATTAATGCAGAGTCAGGGTGTTAAAAAAGAACCTGGTTGTAGCTGGGTTGAGGTTGATGGTCAAGTCAACATTTTTGTCTCTCAAGATGGTACGCATCCAAGAATTGGGGATATTCATTTGAAATTGGAGGAACTAGGAGAAAAGCTAAATTCATTAGGTTATATACCGGAAACAGAAGACGTGCTTCATAGAATCACTGAAAGAGAAAAAAAGGAACATCTCCAATATCACAGTGAAAGGTTGGCTCTTGGTTTTGCCCTTCTAAGTACCAGTCATCCAAAAACTATTCGGATCTTTAAAAATCTACGCATCTGTGGAGACTGCCATGACGTTATGAAGCTTGTCTCCGATGTCACAAATCGGGAAATAGTTGTTCGTGACATCAGGCGGTTTCATCATTTTAAGAATGGAACTTGCTCCTTGAATTCTAAACACTTTCCTCATTACGAACCGAGCCACAGTTTCATACCAAAGGAACTCCGCCCTAATCTTATCAGAATGCCTCTTTCAAAGTCCTGTTTGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00190 ko01100 ko04714 map00190 map01100 map04714
Pfam Domains
Protein Families
DYW_deaminase PPR PPR_2 PPR_3

Protein Analysis

1016

Amino Acids

112.15

Weight (kDa)

5.85

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 172 - 218 2.8e-08 PPR repeat family
PPR PF01535 175 - 204 2.6e-06 PPR repeat
PPR_2 PF13041 274 - 322 8.1e-11 PPR repeat family
PPR PF01535 276 - 304 3.3e-07 PPR repeat
PPR_2 PF13041 374 - 420 4.7e-09 PPR repeat family
PPR_2 PF13041 577 - 624 2e-08 PPR repeat family
PPR_2 PF13041 677 - 725 1.3e-09 PPR repeat family
E_motif PF20431 795 - 857 2.7e-25 E motif
DYW_deaminase PF14432 893 - 982 2.8e-34 DYW family of nucleic acid deaminases
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 43, 2481
Acc36I ACCTGC 4 cut(s) 43, 1671, 2274, 2481
AccB1I GGYRCC 1 cut(s) 2126
AccB7I CCANNNNNTGG 2 cut(s) 1912, 2624
AccBSI CCGCTC 1 cut(s) 981
AccIII TCCGGA 2 cut(s) 42, 421
AciI CCGC 7 cut(s) 981, 1091, 1377, 1873, 1897, 2908, 3001
AclWI GGATC 3 cut(s) 413, 2243, 2819
AcsI RAATTY 6 cut(s) 973, 1034, 1232, 2396, 2668, 2944
AcuI CTGAAG 1 cut(s) 720
AfaI GTAC 6 cut(s) 349, 613, 1213, 1538, 2611, 2788
AfiI CCNNNNNNNGG 5 cut(s) 318, 1680, 1912, 2076, 2624
AflIII ACRYGT 2 cut(s) 1533, 1665
AhdI GACNNNNNGTC 1 cut(s) 523
AhlI ACTAGT 1 cut(s) 1952
AjiI CACGTC 2 cut(s) 1582, 2701
AjnI CCWGG 5 cut(s) 110, 261, 1133, 2178, 2551
AjuI GAANNNNNNNTTGG 2 cut(s) 1667, 1699
Alw21I GWGCWC 4 cut(s) 668, 1399, 1462, 1960
AlwI GGATC 3 cut(s) 413, 2243, 2819
Aor13HI TCCGGA 2 cut(s) 42, 421
AoxI GGCC 3 cut(s) 1131, 1487, 1585
ApeKI GCWGC 5 cut(s) 149, 1259, 1900, 2172, 2411
ApoI RAATTY 6 cut(s) 973, 1034, 1232, 2396, 2668, 2944
ArsI GACNNNNNNTTYG 2 cut(s) 1268, 1300
AseI ATTAAT 1 cut(s) 2522
Asp700I GAANNNNTTC 1 cut(s) 1706
AspA2I CCTAGG 1 cut(s) 1483
AspS9I GGNCC 2 cut(s) 1487, 1585
AsuC2I CCSGG 1 cut(s) 478
AsuHPI GGTGA 9 cut(s) 24, 246, 412, 785, 878, 1215, 1301, 2137, 2414
AvrII CCTAGG 1 cut(s) 1483
BaeGI GKGCMC 1 cut(s) 205
BanI GGYRCC 1 cut(s) 2126
BarI GAAGNNNNNNTAC 2 cut(s) 2115, 2147
BauI CACGAG 1 cut(s) 2028
BbsI GAAGAC 2 cut(s) 1489, 2703
Bbv12I GWGCWC 4 cut(s) 668, 1399, 1462, 1960
BbvCI CCTCAGC 2 cut(s) 1188, 2001
BbvI GCAGC 5 cut(s) 136, 1246, 1912, 2184, 2423
BccI CCATC 6 cut(s) 602, 1072, 1385, 2437, 2570, 2600
BcgI CGANNNNNNTGC 2 cut(s) 2212, 2246
BciT130I CCWGG 5 cut(s) 112, 263, 1135, 2180, 2553
BciVI GTATCC 1 cut(s) 1307
BclI TGATCA 1 cut(s) 1159
BcnI CCSGG 1 cut(s) 478
BcuI ACTAGT 1 cut(s) 1952
BfaI CTAG 9 cut(s) 299, 749, 1004, 1245, 1484, 1569, 1953, 2186, 2654
BfmI CTRYAG 1 cut(s) 895
BfuAI ACCTGC 4 cut(s) 43, 1671, 2274, 2481
BfuI GTATCC 1 cut(s) 1307
BisI GCNGC 6 cut(s) 150, 1260, 1898, 1901, 2173, 2412
BlnI CCTAGG 1 cut(s) 1483
BlsI GCNGC 6 cut(s) 151, 1261, 1899, 1902, 2174, 2413
Bme1390I CCNGG 6 cut(s) 112, 263, 478, 1135, 2180, 2553
BmeRI GACNNNNNGTC 1 cut(s) 523
BmgBI CACGTC 2 cut(s) 1582, 2701
BmgT120I GGNCC 2 cut(s) 1487, 1585
BmiI GGNNCC 1 cut(s) 2128
BmrFI CCNGG 6 cut(s) 112, 263, 478, 1135, 2180, 2553
BmrI ACTGGG 2 cut(s) 651, 722
BmuI ACTGGG 2 cut(s) 651, 722
BpiI GAAGAC 2 cut(s) 1489, 2703
BpmI CTGGAG 2 cut(s) 1156, 1476
Bpu10I CCTNAGC 6 cut(s) 362, 813, 858, 1188, 1398, 2001
BpuEI CTTGAG 1 cut(s) 2586
BpuMI CCSGG 1 cut(s) 478
BsaI GGTCTC 2 cut(s) 1269, 1722
BsaJI CCNNGG 3 cut(s) 1483, 1588, 2179
BsaWI WCCGGW 3 cut(s) 42, 421, 2686
Bsc4I CCNNNNNNNGG 5 cut(s) 318, 1680, 1912, 2076, 2624
Bse1I ACTGG 5 cut(s) 104, 646, 717, 1762, 2790
Bse3DI GCAATG 4 cut(s) 286, 1354, 1419, 2230
BseAI TCCGGA 2 cut(s) 42, 421
BseBI CCWGG 5 cut(s) 112, 263, 1135, 2180, 2553
BseDI CCNNGG 3 cut(s) 1483, 1588, 2179
BseGI GGATG 9 cut(s) 163, 345, 733, 826, 1083, 1113, 2125, 2614, 2794
BseLI CCNNNNNNNGG 5 cut(s) 318, 1680, 1912, 2076, 2624
BseMI GCAATG 4 cut(s) 286, 1354, 1419, 2230
BseNI ACTGG 5 cut(s) 104, 646, 717, 1762, 2790
BseSI GKGCMC 1 cut(s) 205
BseXI GCAGC 5 cut(s) 136, 1246, 1912, 2184, 2423
BseYI CCCAGC 1 cut(s) 2562
BshFI GGCC 3 cut(s) 1133, 1489, 1587
BshNI GGYRCC 1 cut(s) 2126
BsiHKAI GWGCWC 4 cut(s) 668, 1399, 1462, 1960
BsiSI CCGG 4 cut(s) 43, 422, 477, 2687
BslFI GGGAC 3 cut(s) 485, 1663, 2510
BslI CCNNNNNNNGG 5 cut(s) 318, 1680, 1912, 2076, 2624
BsmBI CGTCTC 1 cut(s) 510
BsmFI GGGAC 3 cut(s) 485, 1663, 2510
BsmI GAATGC 5 cut(s) 841, 997, 1100, 1447, 3024
BsnI GGCC 3 cut(s) 1133, 1489, 1587
Bso31I GGTCTC 2 cut(s) 1269, 1722
Bsp1286I GDGCHC 5 cut(s) 205, 668, 1399, 1462, 1960
Bsp13I TCCGGA 2 cut(s) 42, 421
Bsp143I GATC 6 cut(s) 418, 1159, 1267, 2142, 2235, 2811
BspACI CCGC 7 cut(s) 981, 1091, 1377, 1873, 1897, 2908, 3001
BspANI GGCC 3 cut(s) 1133, 1489, 1587
BspEI TCCGGA 2 cut(s) 42, 421
BspLI GGNNCC 1 cut(s) 2128
BspMAI CTGCAG 1 cut(s) 899
BspMI ACCTGC 4 cut(s) 43, 1671, 2274, 2481
BspPI GGATC 3 cut(s) 413, 2243, 2819
BspT107I GGYRCC 1 cut(s) 2126
BspTNI GGTCTC 2 cut(s) 1269, 1722
BsrBI CCGCTC 1 cut(s) 981
BsrDI GCAATG 4 cut(s) 286, 1354, 1419, 2230
BsrI ACTGG 5 cut(s) 104, 646, 717, 1762, 2790
BssECI CCNNGG 3 cut(s) 1483, 1588, 2179
BssMI GATC 6 cut(s) 418, 1159, 1267, 2142, 2235, 2811
BssSI CACGAG 1 cut(s) 2028
BssT1I CCWWGG 2 cut(s) 1483, 1588
Bst2BI CACGAG 1 cut(s) 2028
Bst2UI CCWGG 5 cut(s) 112, 263, 1135, 2180, 2553
Bst4CI ACNGT 7 cut(s) 690, 946, 1747, 2038, 2362, 2753, 2981
Bst6I CTCTTC 1 cut(s) 1739
BstAPI GCANNNNNTGC 2 cut(s) 1088, 1183
BstC8I GCNNGC 7 cut(s) 487, 696, 1379, 1798, 1852, 1867, 2170
BstF5I GGATG 9 cut(s) 163, 345, 733, 826, 1083, 1113, 2125, 2614, 2794
BstKTI GATC 6 cut(s) 421, 1162, 1270, 2145, 2238, 2814
BstMBI GATC 6 cut(s) 418, 1159, 1267, 2142, 2235, 2811
BstNI CCWGG 5 cut(s) 112, 263, 1135, 2180, 2553
BstNSI RCATGY 5 cut(s) 657, 698, 1537, 1669, 2172
BstSCI CCNGG 6 cut(s) 110, 261, 476, 1133, 2178, 2551
BstSFI CTRYAG 1 cut(s) 895
BstSLI GKGCMC 1 cut(s) 205
BstV1I GCAGC 5 cut(s) 136, 1246, 1912, 2184, 2423
BstV2I GAAGAC 2 cut(s) 1489, 2703
BstX2I RGATCY 1 cut(s) 2811
BstYI RGATCY 1 cut(s) 2811
BsuI GTATCC 1 cut(s) 1307
BsuRI GGCC 3 cut(s) 1133, 1489, 1587
BtgZI GCGATG 1 cut(s) 1831
BtrI CACGTC 2 cut(s) 1582, 2701
BtsCI GGATG 9 cut(s) 163, 345, 733, 826, 1083, 1113, 2125, 2614, 2794
BtsI GCAGTG 2 cut(s) 711, 839
BtsIMutI CAGTG 9 cut(s) 187, 711, 839, 942, 1263, 2043, 2216, 2715, 2758
BveI ACCTGC 4 cut(s) 43, 1671, 2274, 2481
Cac8I GCNNGC 7 cut(s) 487, 696, 1379, 1798, 1852, 1867, 2170
Cfr13I GGNCC 2 cut(s) 1487, 1585
CseI GACGC 1 cut(s) 584
CsiI ACCWGGT 1 cut(s) 2551
Csp6I GTAC 6 cut(s) 348, 612, 1212, 1537, 2610, 2787
CviQI GTAC 6 cut(s) 348, 612, 1212, 1537, 2610, 2787
DpnI GATC 6 cut(s) 420, 1161, 1269, 2144, 2237, 2813
DpnII GATC 6 cut(s) 418, 1159, 1267, 2142, 2235, 2811
DraI TTTAAA 1 cut(s) 2818
DriI GACNNNNNGTC 1 cut(s) 523
Eam1104I CTCTTC 1 cut(s) 1739
Eam1105I GACNNNNNGTC 1 cut(s) 523
EarI CTCTTC 1 cut(s) 1739
EciI GGCGGA 1 cut(s) 2990
Eco130I CCWWGG 2 cut(s) 1483, 1588
Eco31I GGTCTC 2 cut(s) 1269, 1722
Eco32I GATATC 1 cut(s) 2008
Eco57I CTGAAG 1 cut(s) 720
EcoRI GAATTC 2 cut(s) 1034, 2944
EcoRII CCWGG 5 cut(s) 110, 261, 1133, 2178, 2551
EcoRV GATATC 1 cut(s) 2008
EcoT14I CCWWGG 2 cut(s) 1483, 1588
EcoT22I ATGCAT 2 cut(s) 330, 2385
ErhI CCWWGG 2 cut(s) 1483, 1588
Esp3I CGTCTC 1 cut(s) 510
FalI AAGNNNNNCTT 4 cut(s) 920, 952, 2688, 2720
FaqI GGGAC 3 cut(s) 485, 1663, 2510
FauI CCCGC 2 cut(s) 1370, 1880
FauNDI CATATG 1 cut(s) 2341
FbaI TGATCA 1 cut(s) 1159
Fnu4HI GCNGC 6 cut(s) 150, 1260, 1898, 1901, 2173, 2412
FokI GGATG 9 cut(s) 170, 352, 740, 833, 1090, 1120, 2132, 2601, 2781
Fsp4HI GCNGC 6 cut(s) 150, 1260, 1898, 1901, 2173, 2412
FspBI CTAG 9 cut(s) 299, 749, 1004, 1245, 1484, 1569, 1953, 2186, 2654
GluI GCNGC 6 cut(s) 150, 1260, 1898, 1901, 2173, 2412
GsaI CCCAGC 1 cut(s) 2566
GsuI CTGGAG 2 cut(s) 1156, 1476
HaeIII GGCC 3 cut(s) 1133, 1489, 1587
HapII CCGG 4 cut(s) 43, 422, 477, 2687
HgaI GACGC 1 cut(s) 584
HincII GTYRAC 3 cut(s) 574, 2506, 2587
HindII GTYRAC 3 cut(s) 574, 2506, 2587
HindIII AAGCTT 4 cut(s) 95, 879, 1704, 2858
HpaI GTTAAC 1 cut(s) 2506
HpaII CCGG 4 cut(s) 43, 422, 477, 2687
HphI GGTGA 9 cut(s) 24, 246, 412, 785, 878, 1215, 1301, 2137, 2414
Hpy166II GTNNAC 6 cut(s) 531, 574, 933, 942, 2506, 2587
Hpy8I GTNNAC 6 cut(s) 531, 574, 933, 942, 2506, 2587
HpyCH4III ACNGT 7 cut(s) 690, 946, 1747, 2038, 2362, 2753, 2981
HpyCH4IV ACGT 4 cut(s) 519, 1581, 2700, 2850
HpySE526I ACGT 4 cut(s) 519, 1581, 2700, 2850
Kpn2I TCCGGA 2 cut(s) 42, 421
Ksp22I TGATCA 1 cut(s) 1159
KspAI GTTAAC 1 cut(s) 2506
Kzo9I GATC 6 cut(s) 418, 1159, 1267, 2142, 2235, 2811
LmnI GCTCC 5 cut(s) 671, 1457, 1874, 1908, 2942
Lsp1109I GCAGC 5 cut(s) 136, 1246, 1912, 2184, 2423
MabI ACCWGGT 1 cut(s) 2551
MaeI CTAG 9 cut(s) 299, 749, 1004, 1245, 1484, 1569, 1953, 2186, 2654
MaeII ACGT 4 cut(s) 519, 1581, 2700, 2850
MaeIII GTNAC 5 cut(s) 30, 866, 1948, 2872, 2897
MalI GATC 6 cut(s) 420, 1161, 1269, 2144, 2237, 2813
MbiI CCGCTC 1 cut(s) 981
MboI GATC 6 cut(s) 418, 1159, 1267, 2142, 2235, 2811
MboII GAAGA 8 cut(s) 613, 1489, 1703, 1726, 1829, 1949, 2204, 2708
MfeI CAATTG 1 cut(s) 2247
MflI RGATCY 1 cut(s) 2811
MhlI GDGCHC 5 cut(s) 205, 668, 1399, 1462, 1960
MlyI GAGTC 6 cut(s) 161, 211, 467, 1503, 2207, 2539
MmeI TCCRAC 2 cut(s) 4, 2097
Mph1103I ATGCAT 2 cut(s) 330, 2385
MroI TCCGGA 2 cut(s) 42, 421
MroXI GAANNNNTTC 1 cut(s) 1706
MslI CAYNNNNRTG 5 cut(s) 1287, 1467, 1664, 1880, 2388
MspI CCGG 4 cut(s) 43, 422, 477, 2687
MspR9I CCNGG 6 cut(s) 112, 263, 478, 1135, 2180, 2553
MunI CAATTG 1 cut(s) 2247
Mva1269I GAATGC 5 cut(s) 841, 997, 1100, 1447, 3024
MvaI CCWGG 5 cut(s) 112, 263, 1135, 2180, 2553
NciI CCSGG 1 cut(s) 478
NdeI CATATG 1 cut(s) 2341
NdeII GATC 6 cut(s) 418, 1159, 1267, 2142, 2235, 2811
NlaIV GGNNCC 1 cut(s) 2128
NmeAIII GCCGAG 1 cut(s) 2259
NmuCI GTSAC 4 cut(s) 30, 866, 2872, 2897
NsiI ATGCAT 2 cut(s) 330, 2385
NspI RCATGY 5 cut(s) 657, 698, 1537, 1669, 2172
PaeI GCATGC 2 cut(s) 698, 2172
PaqCI CACCTGC 2 cut(s) 43, 2481
PciI ACATGT 2 cut(s) 1533, 1665
PctI GAATGC 5 cut(s) 841, 997, 1100, 1447, 3024
PdmI GAANNNNTTC 1 cut(s) 1706
PfeI GAWTC 7 cut(s) 172, 185, 425, 908, 1787, 2447, 2712
PflMI CCANNNNNTGG 2 cut(s) 1912, 2624
PkrI GCNGC 6 cut(s) 151, 1261, 1899, 1902, 2174, 2413
PleI GAGTC 6 cut(s) 161, 211, 467, 1502, 2207, 2538
PpsI GAGTC 6 cut(s) 161, 211, 467, 1502, 2207, 2538
PscI ACATGT 2 cut(s) 1533, 1665
PshBI ATTAAT 1 cut(s) 2522
Psp6I CCWGG 5 cut(s) 110, 261, 1133, 2178, 2551
PspFI CCCAGC 1 cut(s) 2562
PspGI CCWGG 5 cut(s) 110, 261, 1133, 2178, 2551
PspN4I GGNNCC 1 cut(s) 2128
PspPI GGNCC 2 cut(s) 1487, 1585
PstI CTGCAG 1 cut(s) 899
PsuI RGATCY 1 cut(s) 2811
RsaI GTAC 6 cut(s) 349, 613, 1213, 1538, 2611, 2788
RsaNI GTAC 6 cut(s) 348, 612, 1212, 1537, 2610, 2787
RseI CAYNNNNRTG 5 cut(s) 1287, 1467, 1664, 1880, 2388
SatI GCNGC 6 cut(s) 150, 1260, 1898, 1901, 2173, 2412
Sau3AI GATC 6 cut(s) 418, 1159, 1267, 2142, 2235, 2811
Sau96I GGNCC 2 cut(s) 1487, 1585
SchI GAGTC 6 cut(s) 161, 211, 467, 1503, 2207, 2539
ScrFI CCNGG 6 cut(s) 112, 263, 478, 1135, 2180, 2553
SduI GDGCHC 5 cut(s) 205, 668, 1399, 1462, 1960
SexAI ACCWGGT 1 cut(s) 2551
SfcI CTRYAG 1 cut(s) 895
SmiMI CAYNNNNRTG 5 cut(s) 1287, 1467, 1664, 1880, 2388
SmlI CTYRAG 1 cut(s) 2601
SmoI CTYRAG 1 cut(s) 2601
SpeI ACTAGT 1 cut(s) 1952
SphI GCATGC 2 cut(s) 698, 2172
SsiI CCGC 7 cut(s) 981, 1091, 1377, 1873, 1897, 2908, 3001
SspI AATATT 1 cut(s) 2050
SspMI CTAG 9 cut(s) 299, 749, 1004, 1245, 1484, 1569, 1953, 2186, 2654
StyD4I CCNGG 6 cut(s) 110, 261, 476, 1133, 2178, 2551
StyI CCWWGG 2 cut(s) 1483, 1588
TaaI ACNGT 7 cut(s) 690, 946, 1747, 2038, 2362, 2753, 2981
TaiI ACGT 4 cut(s) 522, 1584, 2703, 2853
TatI WGTACW 2 cut(s) 1211, 1536
TauI GCSGC 1 cut(s) 1900
TfiI GAWTC 7 cut(s) 172, 185, 425, 908, 1787, 2447, 2712
TscAI CASTG 9 cut(s) 187, 711, 846, 949, 1270, 2043, 2223, 2722, 2758
TseFI GTSAC 4 cut(s) 30, 866, 2872, 2897
TseI GCWGC 5 cut(s) 149, 1259, 1900, 2172, 2411
Tsp45I GTSAC 4 cut(s) 30, 866, 2872, 2897
TspGWI ACGGA 1 cut(s) 885
TspRI CASTG 9 cut(s) 187, 711, 846, 949, 1270, 2043, 2223, 2722, 2758
Van91I CCANNNNNTGG 2 cut(s) 1912, 2624
VspI ATTAAT 1 cut(s) 2522
XapI RAATTY 6 cut(s) 973, 1034, 1232, 2396, 2668, 2944
XceI RCATGY 5 cut(s) 657, 698, 1537, 1669, 2172
XmaJI CCTAGG 1 cut(s) 1483
XmnI GAANNNNTTC 1 cut(s) 1706
XspI CTAG 9 cut(s) 299, 749, 1004, 1245, 1484, 1569, 1953, 2186, 2654
Zsp2I ATGCAT 2 cut(s) 330, 2385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.