pycom15g24980

CBS domain-containing protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
19337798 .. 19338603
806 bp
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UTR
Exon/CDS
Intron
pycom15g24980.3

Sequence Viewer

Length: 333 bp
ATGCAAATCATTCGAATATTTCACCTGATAGGAAGCGGAAGAACTGACAACAGCATGTTTCCAGAAGTTGACAGCACTTGGAAAACTTTTAACGAGGTACAGAACTTGCTCAGTAAAACCAATGGTCGGGTGGTGGGTGATGTGATGACACCAGCCCCAGTTGTCGTTCGTGAAACCACTAATCTTGGGGATGTTGCTAGATTATTGCTCGAGACAAAATATCGCAGACTTCCAGTTGTAAATGAAAGCGGCAAGCTGATAGGAATTATTACAAGAGGAAACATCATACGAGCTGCCCTTCAAATGAAACATGCTAGTGAATCGAAAACATAA

Protein Analysis

111

Amino Acids

12.26

Weight (kDa)

10.1

Isoelectric Point (pI)

28.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 36, 249
AfaI GTAC 1 cut(s) 99
AfiI CCNNNNNNNGG 1 cut(s) 126
AgsI TTSAA 1 cut(s) 302
AluBI AGCT 2 cut(s) 256, 293
AluI AGCT 2 cut(s) 256, 293
Alw26I GTCTC 1 cut(s) 206
Ama87I CYCGRG 1 cut(s) 209
ApeKI GCWGC 1 cut(s) 293
AsuHPI GGTGA 2 cut(s) 14, 149
AsuII TTCGAA 1 cut(s) 13
AvaI CYCGRG 1 cut(s) 209
BbvI GCAGC 1 cut(s) 280
BcgI CGANNNNNNTGC 1 cut(s) 27
BcoDI GTCTC 1 cut(s) 206
BfaI CTAG 2 cut(s) 198, 315
BisI GCNGC 2 cut(s) 250, 294
BlsI GCNGC 2 cut(s) 251, 295
BmeT110I CYCGRG 1 cut(s) 209
BmrI ACTGGG 1 cut(s) 152
BmuI ACTGGG 1 cut(s) 152
Bpu14I TTCGAA 1 cut(s) 13
Bsc4I CCNNNNNNNGG 1 cut(s) 126
Bse1I ACTGG 2 cut(s) 158, 233
BseGI GGATG 1 cut(s) 196
BseLI CCNNNNNNNGG 1 cut(s) 126
BseMII CTCAG 1 cut(s) 124
BseNI ACTGG 2 cut(s) 158, 233
BseXI GCAGC 1 cut(s) 280
BsiHKCI CYCGRG 1 cut(s) 209
BslI CCNNNNNNNGG 1 cut(s) 126
BsmAI GTCTC 1 cut(s) 206
BsoBI CYCGRG 1 cut(s) 209
Bsp119I TTCGAA 1 cut(s) 13
BspACI CCGC 2 cut(s) 36, 249
BspCNI CTCAG 1 cut(s) 123
BspT104I TTCGAA 1 cut(s) 13
BsrI ACTGG 2 cut(s) 158, 233
BstBI TTCGAA 1 cut(s) 13
BstC8I GCNNGC 1 cut(s) 254
BstDEI CTNAG 1 cut(s) 110
BstF5I GGATG 1 cut(s) 196
BstMAI GTCTC 1 cut(s) 206
BstNSI RCATGY 2 cut(s) 58, 314
BstV1I GCAGC 1 cut(s) 280
BtsCI GGATG 1 cut(s) 196
Cac8I GCNNGC 1 cut(s) 254
Csp6I GTAC 1 cut(s) 98
CspCI CAANNNNNGTGG 2 cut(s) 166, 201
CviAII CATG 2 cut(s) 55, 311
CviJI RGCY 3 cut(s) 155, 256, 293
CviKI_1 RGCY 3 cut(s) 155, 256, 293
CviQI GTAC 1 cut(s) 98
DdeI CTNAG 1 cut(s) 110
Eco88I CYCGRG 1 cut(s) 209
FaeI CATG 2 cut(s) 58, 314
FaiI YATR 4 cut(s) 56, 287, 312, 331
FatI CATG 2 cut(s) 54, 310
Fnu4HI GCNGC 2 cut(s) 250, 294
FokI GGATG 1 cut(s) 203
Fsp4HI GCNGC 2 cut(s) 250, 294
FspBI CTAG 2 cut(s) 198, 315
GluI GCNGC 2 cut(s) 250, 294
Hin1II CATG 2 cut(s) 58, 314
HincII GTYRAC 1 cut(s) 70
HindII GTYRAC 1 cut(s) 70
HinfI GANTC 1 cut(s) 320
HphI GGTGA 2 cut(s) 14, 149
Hpy166II GTNNAC 1 cut(s) 70
Hpy188III TCNNGA 3 cut(s) 62, 170, 211
Hpy8I GTNNAC 1 cut(s) 70
HpyAV CCTTC 1 cut(s) 308
HpyCH4V TGCA 1 cut(s) 4
HpyF3I CTNAG 1 cut(s) 110
Hsp92II CATG 2 cut(s) 58, 314
LpnPI CCDG 5 cut(s) 38, 75, 165, 171, 246
Lsp1109I GCAGC 1 cut(s) 280
MaeI CTAG 2 cut(s) 198, 315
MboII GAAGA 1 cut(s) 51
MluCI AATT 1 cut(s) 264
MnlI CCTC 2 cut(s) 88, 269
MseI TTAA 1 cut(s) 90
MslI CAYNNNNRTG 1 cut(s) 315
NlaIII CATG 2 cut(s) 58, 314
NspI RCATGY 2 cut(s) 58, 314
NspV TTCGAA 1 cut(s) 13
PaeR7I CTCGAG 1 cut(s) 209
PfeI GAWTC 1 cut(s) 320
PkrI GCNGC 2 cut(s) 251, 295
RsaI GTAC 1 cut(s) 99
RsaNI GTAC 1 cut(s) 98
RseI CAYNNNNRTG 1 cut(s) 315
SaqAI TTAA 1 cut(s) 90
SatI GCNGC 2 cut(s) 250, 294
SetI ASST 4 cut(s) 27, 99, 258, 295
Sfr274I CTCGAG 1 cut(s) 209
SfuI TTCGAA 1 cut(s) 13
SlaI CTCGAG 1 cut(s) 209
SmiMI CAYNNNNRTG 1 cut(s) 315
SmlI CTYRAG 1 cut(s) 209
SmoI CTYRAG 1 cut(s) 209
Sse9I AATT 1 cut(s) 264
SsiI CCGC 2 cut(s) 36, 249
SspI AATATT 1 cut(s) 18
SspMI CTAG 2 cut(s) 198, 315
TaqI TCGA 3 cut(s) 13, 210, 323
TasI AATT 1 cut(s) 264
TauI GCSGC 1 cut(s) 252
TfiI GAWTC 1 cut(s) 320
Tru1I TTAA 1 cut(s) 90
Tru9I TTAA 1 cut(s) 90
TseI GCWGC 1 cut(s) 293
TspDTI ATGAA 2 cut(s) 258, 320
XceI RCATGY 2 cut(s) 58, 314
XcmI CCANNNNNNNNNTGG 1 cut(s) 127
XhoI CTCGAG 1 cut(s) 209
XspI CTAG 2 cut(s) 198, 315
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.