Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0002142

Physical Location & Seq

Genomic Coordinates Forward (+)

25843041 .. 25849130

Gene Structure 6090 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2097 bp

ATGGGGGATATTTGCGGCTGGTTGAAAGGCACTGAAAATGGCCCTGATGTTGGTTTTCTTCATAGGGGTGGTCACCGAAGCTTTCCTGTAGGTCTATTTCTTAGAAATGATCCTCATCGAAATGACAGTTCTAGGCTTGGAGGGTCTTTTAGTCATCTTTCAAAATCATACCAGGCATATGATGAGGAAACAGAACTAATTCGGTGGGAGGAAGGCTGTATGGACGATGAAGAAACCAGAGTGACTCATTCAACTACAAAAAAGCCGTGTTGTTGCTCATGCTACAATGATGATTTTACAAGAATCTTGAAGTATCCAATTCCATACACAGCCAAAGGTTCTCGTGTCCATTGCAGTTCCATTCCAGAGAGATCTGCCCATGTTGCTACAGAATGCAGTACTGGAAGTTTGAATGATGAAATAGAAGATAAACCTAGTTCAAGTTATCAATCTGAATCTGAATTTAGTTATCGCCCAGTGCAGCATATGAAGTTTGTACAAAGGGAAAGTAATATATCTTCAGCTACACTCAGAGAAGAAGAACTTCTAGACGTTTTGCTGCTATTGTATCATATAGGTCTTGCACCAAATTTTAAGCAGGCATCGTATTACATGTCTCACCAGTCGCAGTCAATATCCCTCATGGAAGAAGCTGATAAACAATTAAGAGAAAAAACTAGCAATGAGCAATTAAAGCATTTGAAAGAAGCTCGTAATGGTTATAGAGAAGAAGTTATTGATTGTGTCAGACAATGTGCTTGGTACCGTATTTCTCTATTTTCTCGATGGAAGCAAAGAGGAATGTATGCAACATGCATATGGACCGTCCAGTTGCTTTTGGTTCTTAGCAAAGTTGATCTACTGTTCCTTTATATCCCTGAATATTATCTGGAAGCTCTTGTCGATTGCTTCCATGTATTGCGCAAAAGTGATCCTCCATTTGTACCTTCATCGATATTTATCAAGCAAGGCCTTGCTTCATTTGTCACTTTTGTGGTCACGCACTTCAACGATCCTCGAATATCGAGTGCAGATCTTAGGGATCTGCTTCTCCAATCAATCTCAGTCTTGGTACAGTACAAAGAGTATTTGTCTGTTTTTGAGAGTAATGAAGCAGCCACCCAGAGGATGCCTAAGGCATTGCTGTCAGCATTTGATAATAGATCCTGGATTCCTGTGACGAACATTCTTCTGCGTTTGTGCAAGGGATCTGGCTTTGGTTCTTCAAAGCATGGAGAATCATCATCTTCATCTGTTGTCTTCCAGAGATTGTTAGGAGAAACATGTATCAATGATGAGGAATTGTTCTCAGCTTTTCTCAATCGCCTATTTAACACTCTCAGCTGGACAATGACTGAATTCTCAGTTTCTGTCAGAGAAATGCAAGAGAAGTACCAGGTATTAGAGTTCCAGCAAAAGAAATGCAGTGTCATATTTGATCTTTCATGCAATCTTGCAAGGCTTTTGGAGTTCTGTACCCACGCGATACCTCAAGCATTTCTGTTTGGAGCTGAAACAAACCTTCGAAGGTTGACCGAGTTGATTGTCTTTATTCTGAACCACATAACTTCAGCAGAAGATGCTGAGTTTTTTGATTTGTTGCTGAGACGACATGGTCAATCTTCAGAAAAAGTAAACCGAGGGATGATATTGGCACCTCTTGTAGGAATTATCTTAAACTTGTTAAATGCCGGTGAGCATATGGAATGCAGGGAGCACAATGATGTTGTGAGCATCTTTGCAAGCATGGGTTGCCTTGACAGTTTTCAATGCAGATTCCAGTACCTATTGGATTACAACTGGGCTGGAACCTTTAGAGGCGATGCTTATCTTGTAAAACTTGCCCAGCTAGAGAATTTTCTGAGCCTCCTCAGCCGGAGCCAATCACAAGAAAATACAATATGCGAGGGAGAAACGGATGGGGATGATGGCATGTGCTGCATCTGTTATTCCCGTGAAGCAGATGCTCAGTTTTCACCTTGTTCCCACAGGTCATGTTATGGCTGCATAACCAGGCATCTTTTGAATTGCCACAGGTGCTTTTTTTGCAATGCAAGAGTCATGGACGTTGTCCGGATCAACGAGAAGACGGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0030163 GO:0032446 GO:0036211 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0050789 GO:0050794 GO:0050896 GO:0051704 GO:0051707 GO:0051726 GO:0060154 GO:0065007 GO:0070647 GO:0071704 GO:0098586 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

SPRY Ufd2P_core zf-C3HC4_3

Protein Analysis

699

Amino Acids

79.82

Weight (kDa)

5.86

Isoelectric Point (pI)

48.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Ufd2P_core	PF10408	190 - 385	2.8e-06	Ubiquitin elongating factor core
TPR_RNF123	PF25576	437 - 629	2.5e-82	RNF123-like, TPR repeat
zf-C3HC4_3	PF13920	643 - 688	1.8e-07	Zinc finger, C3HC4 type (RING finger)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0002142)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G22010 AT2G22010
fragaria_vesca	FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_1g22150 FvH4_7g04730 FvH4_7g04730
malus_domestica	MD01G1017400.v1.1 MD15G1333600.v1.1
prunus_persica	Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1 Prupe.6G174100_v2.0.a1
pyrus_communis	pycom01g04820 pycom01g04830 pycom15g29160 pycom15g29170
rosa_chinensis	RchiOBHm_Chr2g0116231
rosa_laevigata	RLG00000018249
rosa_multiflora	Rmu_sc0003499.1_g000012 Rmu_sc0004888.1_g000064
rosa_roxburghii	Rroxscaffold_2G00127410
rosa_rugosa	Rorug02G0205000
rosa_samantha	Rh2AG260600 Rh2BG271700 Rh2CG266800 Rh2DG268800
rosa_wichuraiana	Rw2G020430

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1614
Acc16I	TGCGCA	1 cut(s)	923
Acc65I	GGTACC	1 cut(s)	762
AccB1I	GGYRCC	2 cut(s)	762, 1654
AccII	CGCG	1 cut(s)	1484
AccIII	TCCGGA	1 cut(s)	2073
AciI	CCGC	1 cut(s)	15
AclWI	GGATC	7 cut(s)	104, 926, 1007, 1050, 1158, 1216, 2084
AcsI	RAATTY	4 cut(s)	461, 589, 1358, 1855
AcuI	CTGAAG	3 cut(s)	504, 1554, 1608
AfaI	GTAC	9 cut(s)	400, 498, 764, 945, 1074, 1079, 1394, 1477, 1784
AfiI	CCNNNNNNNGG	3 cut(s)	50, 1125, 1664
AflIII	ACRYGT	2 cut(s)	612, 1283
AjnI	CCWGG	4 cut(s)	171, 1166, 1395, 2012
AleI	CACNNNNGTG	1 cut(s)	992
AluBI	AGCT	9 cut(s)	81, 524, 653, 710, 896, 1313, 1344, 1511, 1849
AluI	AGCT	9 cut(s)	81, 524, 653, 710, 896, 1313, 1344, 1511, 1849
Alw21I	GWGCWC	1 cut(s)	1719
Alw26I	GTCTC	2 cut(s)	621, 1600
AlwI	GGATC	7 cut(s)	104, 926, 1007, 1050, 1158, 1216, 2084
AlwNI	CAGNNNCTG	1 cut(s)	1370
Aor13HI	TCCGGA	1 cut(s)	2073
AoxI	GGCC	2 cut(s)	40, 970
ApeKI	GCWGC	5 cut(s)	481, 559, 1115, 1938, 2004
ApoI	RAATTY	4 cut(s)	461, 589, 1358, 1855
Asp700I	GAANNNNTTC	2 cut(s)	198, 543
Asp718I	GGTACC	1 cut(s)	762
AspLEI	GCGC	1 cut(s)	924
AspS9I	GGNCC	2 cut(s)	41, 822
AsuHPI	GGTGA	4 cut(s)	65, 611, 1706, 1968
AsuII	TTCGAA	1 cut(s)	1525
AvaII	GGWCC	1 cut(s)	822
AxyI	CCTNAGG	1 cut(s)	1134
BanI	GGYRCC	2 cut(s)	762, 1654
BarI	GAAGNNNNNNTAC	2 cut(s)	502, 534
BauI	CACGAG	1 cut(s)	342
BbsI	GAAGAC	2 cut(s)	1252, 2093
Bbv12I	GWGCWC	1 cut(s)	1719
BbvCI	CCTCAGC	1 cut(s)	1871
BbvI	GCAGC	5 cut(s)	493, 546, 1127, 1925, 1991
BccI	CCATC	3 cut(s)	780, 1913, 1922
BceAI	ACGGC	1 cut(s)	250
BciT130I	CCWGG	4 cut(s)	173, 1168, 1397, 2014
BciVI	GTATCC	1 cut(s)	324
BcoDI	GTCTC	2 cut(s)	621, 1600
BfaI	CTAG	5 cut(s)	132, 435, 548, 678, 1850
BfmI	CTRYAG	2 cut(s)	87, 387
BfuI	GTATCC	1 cut(s)	324
BglII	AGATCT	2 cut(s)	371, 1033
BisI	GCNGC	6 cut(s)	16, 482, 560, 1116, 1939, 2005
BlsI	GCNGC	6 cut(s)	17, 483, 561, 1117, 1940, 2006
BmcAI	AGTACT	1 cut(s)	400
Bme1390I	CCNGG	4 cut(s)	173, 1168, 1397, 2014
Bme18I	GGWCC	1 cut(s)	822
BmgT120I	GGNCC	2 cut(s)	41, 822
BmiI	GGNNCC	4 cut(s)	764, 1656, 1810, 1880
BmrFI	CCNGG	4 cut(s)	173, 1168, 1397, 2014
BmrI	ACTGGG	2 cut(s)	470, 1810
BmsI	GCATC	8 cut(s)	611, 1119, 1570, 1743, 1813, 1950, 1954, 2026
BmuI	ACTGGG	2 cut(s)	470, 1810
BpiI	GAAGAC	2 cut(s)	1252, 2093
Bpu10I	CCTNAGC	1 cut(s)	1871
Bpu14I	TTCGAA	1 cut(s)	1525
BpuEI	CTTGAG	1 cut(s)	1476
Bsa29I	ATCGAT	1 cut(s)	953
BsaBI	GATNNNNATC	3 cut(s)	114, 959, 1827
BsaJI	CCNNGG	1 cut(s)	1639
BsaWI	WCCGGW	1 cut(s)	2073
Bsc4I	CCNNNNNNNGG	3 cut(s)	50, 1125, 1664
Bse118I	RCCGGY	1 cut(s)	1691
Bse1I	ACTGG	6 cut(s)	406, 476, 622, 829, 1780, 1805
Bse21I	CCTNAGG	1 cut(s)	1134
Bse3DI	GCAATG	4 cut(s)	349, 688, 1139, 2056
Bse8I	GATNNNNATC	3 cut(s)	114, 959, 1827
BseAI	TCCGGA	1 cut(s)	2073
BseBI	CCWGG	4 cut(s)	173, 1168, 1397, 2014
BseCI	ATCGAT	1 cut(s)	953
BseDI	CCNNGG	1 cut(s)	1639
BseGI	GGATG	4 cut(s)	1134, 1650, 1924, 1930
BseJI	GATNNNNATC	3 cut(s)	114, 959, 1827
BseLI	CCNNNNNNNGG	3 cut(s)	50, 1125, 1664
BseMI	GCAATG	4 cut(s)	349, 688, 1139, 2056
BseNI	ACTGG	6 cut(s)	406, 476, 622, 829, 1780, 1805
BseRI	GAGGAG	1 cut(s)	1859
BseXI	GCAGC	5 cut(s)	493, 546, 1127, 1925, 1991
BseYI	CCCAGC	1 cut(s)	1845
BsgI	GTGCAG	2 cut(s)	500, 1050
Bsh1236I	CGCG	1 cut(s)	1484
BshFI	GGCC	2 cut(s)	42, 972
BshNI	GGYRCC	2 cut(s)	762, 1654
BshVI	ATCGAT	1 cut(s)	953
BsiHKAI	GWGCWC	1 cut(s)	1719
BsiSI	CCGG	3 cut(s)	1692, 1876, 2074
BslI	CCNNNNNNNGG	3 cut(s)	50, 1125, 1664
BsmAI	GTCTC	2 cut(s)	621, 1600
BsmBI	CGTCTC	1 cut(s)	1600
BsmI	GAATGC	2 cut(s)	398, 1712
BsnI	GGCC	2 cut(s)	42, 972
Bsp119I	TTCGAA	1 cut(s)	1525
Bsp1286I	GDGCHC	1 cut(s)	1719
Bsp13I	TCCGGA	1 cut(s)	2073
Bsp1407I	TGTACA	1 cut(s)	496
BspACI	CCGC	1 cut(s)	15
BspANI	GGCC	2 cut(s)	42, 972
BspDI	ATCGAT	1 cut(s)	953
BspEI	TCCGGA	1 cut(s)	2073
BspFNI	CGCG	1 cut(s)	1484
BspLI	GGNNCC	4 cut(s)	764, 1656, 1810, 1880
BspPI	GGATC	7 cut(s)	104, 926, 1007, 1050, 1158, 1216, 2084
BspT104I	TTCGAA	1 cut(s)	1525
BspT107I	GGYRCC	2 cut(s)	762, 1654
BsrDI	GCAATG	4 cut(s)	349, 688, 1139, 2056
BsrFI	RCCGGY	1 cut(s)	1691
BsrGI	TGTACA	1 cut(s)	496
BsrI	ACTGG	6 cut(s)	406, 476, 622, 829, 1780, 1805
BssAI	RCCGGY	1 cut(s)	1691
BssECI	CCNNGG	1 cut(s)	1639
BssSI	CACGAG	1 cut(s)	342
Bst2BI	CACGAG	1 cut(s)	342
Bst2UI	CCWGG	4 cut(s)	173, 1168, 1397, 2014
Bst4CI	ACNGT	6 cut(s)	128, 767, 826, 864, 1077, 1763
BstAPI	GCANNNNNTGC	3 cut(s)	1580, 1752, 1938
BstAUI	TGTACA	1 cut(s)	496
BstBI	TTCGAA	1 cut(s)	1525
BstC8I	GCNNGC	2 cut(s)	600, 1744
BstEII	GGTNACC	1 cut(s)	71
BstENI	CCTNNNNNAGG	1 cut(s)	1662
BstF5I	GGATG	4 cut(s)	1134, 1650, 1924, 1930
BstFNI	CGCG	1 cut(s)	1484
BstHHI	GCGC	1 cut(s)	924
BstMAI	GTCTC	2 cut(s)	621, 1600
BstMWI	GCNNNNNNNGC	8 cut(s)	383, 694, 1580, 1752, 1872, 1938, 2037, 2046
BstNI	CCWGG	4 cut(s)	173, 1168, 1397, 2014
BstNSI	RCATGY	4 cut(s)	616, 816, 1287, 1936
BstPI	GGTNACC	1 cut(s)	71
BstSCI	CCNGG	4 cut(s)	171, 1166, 1395, 2012
BstSFI	CTRYAG	2 cut(s)	87, 387
BstUI	CGCG	1 cut(s)	1484
BstV1I	GCAGC	5 cut(s)	493, 546, 1127, 1925, 1991
BstV2I	GAAGAC	2 cut(s)	1252, 2093
BstX2I	RGATCY	5 cut(s)	371, 1033, 1042, 1163, 1208
BstYI	RGATCY	5 cut(s)	371, 1033, 1042, 1163, 1208
Bsu15I	ATCGAT	1 cut(s)	953
Bsu36I	CCTNAGG	1 cut(s)	1134
BsuI	GTATCC	1 cut(s)	324
BsuRI	GGCC	2 cut(s)	42, 972
BsuTUI	ATCGAT	1 cut(s)	953
BtgZI	GCGATG	1 cut(s)	1836
BtsCI	GGATG	4 cut(s)	1134, 1650, 1924, 1930
BtsI	GCAGTG	1 cut(s)	1432
BtsIMutI	CAGTG	3 cut(s)	30, 483, 1432
Cac8I	GCNNGC	2 cut(s)	600, 1744
CaiI	CAGNNNCTG	1 cut(s)	1370
CfoI	GCGC	1 cut(s)	924
Cfr10I	RCCGGY	1 cut(s)	1691
Cfr13I	GGNCC	2 cut(s)	41, 822
ClaI	ATCGAT	1 cut(s)	953
CsiI	ACCWGGT	1 cut(s)	1395
Csp6I	GTAC	9 cut(s)	399, 497, 763, 944, 1073, 1078, 1393, 1476, 1783
CviQI	GTAC	9 cut(s)	399, 497, 763, 944, 1073, 1078, 1393, 1476, 1783
DrdI	GACNNNNNNGTC	1 cut(s)	1614
DseDI	GACNNNNNNGTC	1 cut(s)	1614
Eco147I	AGGCCT	1 cut(s)	972
Eco47I	GGWCC	1 cut(s)	822
Eco57I	CTGAAG	3 cut(s)	504, 1554, 1608
Eco81I	CCTNAGG	1 cut(s)	1134
Eco91I	GGTNACC	1 cut(s)	71
EcoNI	CCTNNNNNAGG	1 cut(s)	1662
EcoO65I	GGTNACC	1 cut(s)	71
EcoRI	GAATTC	1 cut(s)	1358
EcoRII	CCWGG	4 cut(s)	171, 1166, 1395, 2012
EcoT22I	ATGCAT	1 cut(s)	818
Esp3I	CGTCTC	1 cut(s)	1600
FalI	AAGNNNNNCTT	2 cut(s)	528, 560
FauNDI	CATATG	4 cut(s)	178, 486, 818, 1701
Fnu4HI	GCNGC	6 cut(s)	16, 482, 560, 1116, 1939, 2005
FokI	GGATG	4 cut(s)	1141, 1657, 1931, 1937
Fsp4HI	GCNGC	6 cut(s)	16, 482, 560, 1116, 1939, 2005
FspBI	CTAG	5 cut(s)	132, 435, 548, 678, 1850
FspI	TGCGCA	1 cut(s)	923
GlaI	GCGC	1 cut(s)	923
GluI	GCNGC	6 cut(s)	16, 482, 560, 1116, 1939, 2005
GsaI	CCCAGC	1 cut(s)	1849
HaeIII	GGCC	2 cut(s)	42, 972
HapII	CCGG	3 cut(s)	1692, 1876, 2074
HhaI	GCGC	1 cut(s)	924
Hin6I	GCGC	1 cut(s)	922
HinP1I	GCGC	1 cut(s)	922
HincII	GTYRAC	1 cut(s)	1533
HindII	GTYRAC	1 cut(s)	1533
HindIII	AAGCTT	1 cut(s)	79
HinfI	GANTC	7 cut(s)	244, 303, 455, 1171, 1238, 1776, 2058
HpaII	CCGG	3 cut(s)	1692, 1876, 2074
HphI	GGTGA	4 cut(s)	65, 611, 1706, 1968
Hpy166II	GTNNAC	2 cut(s)	1533, 1636
Hpy188I	TCNGA	8 cut(s)	454, 460, 533, 749, 1376, 1557, 1627, 1863
Hpy188III	TCNNGA	7 cut(s)	307, 365, 548, 783, 890, 1264, 2074
Hpy8I	GTNNAC	2 cut(s)	1533, 1636
HpyAV	CCTTC	4 cut(s)	206, 957, 1521, 1532
HpyCH4III	ACNGT	6 cut(s)	128, 767, 826, 864, 1077, 1763
HpyCH4IV	ACGT	2 cut(s)	552, 2067
HpyF10VI	GCNNNNNNNGC	8 cut(s)	383, 694, 1580, 1752, 1872, 1938, 2037, 2046
HpySE526I	ACGT	2 cut(s)	552, 2067
HspAI	GCGC	1 cut(s)	922
Kpn2I	TCCGGA	1 cut(s)	2073
KpnI	GGTACC	1 cut(s)	766
LmnI	GCTCC	3 cut(s)	1508, 1714, 1878
Lsp1109I	GCAGC	5 cut(s)	493, 546, 1127, 1925, 1991
LweI	GCATC	8 cut(s)	611, 1119, 1570, 1743, 1813, 1950, 1954, 2026
MabI	ACCWGGT	1 cut(s)	1395
MaeI	CTAG	5 cut(s)	132, 435, 548, 678, 1850
MaeII	ACGT	2 cut(s)	552, 2067
MaeIII	GTNAC	5 cut(s)	71, 241, 985, 997, 1177
MflI	RGATCY	5 cut(s)	371, 1033, 1042, 1163, 1208
MhlI	GDGCHC	1 cut(s)	1719
MlyI	GAGTC	2 cut(s)	238, 2067
Mph1103I	ATGCAT	1 cut(s)	818
MroI	TCCGGA	1 cut(s)	2073
MroXI	GAANNNNTTC	2 cut(s)	198, 543
MseI	TTAA	6 cut(s)	594, 665, 692, 1332, 1676, 1685
MslI	CAYNNNNRTG	5 cut(s)	66, 120, 817, 992, 1722
MspA1I	CMGCKG	1 cut(s)	1344
MspI	CCGG	3 cut(s)	1692, 1876, 2074
MspR9I	CCNGG	4 cut(s)	173, 1168, 1397, 2014
Mva1269I	GAATGC	2 cut(s)	398, 1712
MvaI	CCWGG	4 cut(s)	173, 1168, 1397, 2014
MvnI	CGCG	1 cut(s)	1484
MwoI	GCNNNNNNNGC	8 cut(s)	383, 694, 1580, 1752, 1872, 1938, 2037, 2046
NdeI	CATATG	4 cut(s)	178, 486, 818, 1701
NlaIV	GGNNCC	4 cut(s)	764, 1656, 1810, 1880
NmuCI	GTSAC	5 cut(s)	71, 241, 985, 997, 1177
NsbI	TGCGCA	1 cut(s)	923
NsiI	ATGCAT	1 cut(s)	818
NspI	RCATGY	4 cut(s)	616, 816, 1287, 1936
NspV	TTCGAA	1 cut(s)	1525
OliI	CACNNNNGTG	1 cut(s)	992
PceI	AGGCCT	1 cut(s)	972
PciI	ACATGT	2 cut(s)	612, 1283
PctI	GAATGC	2 cut(s)	398, 1712
PdmI	GAANNNNTTC	2 cut(s)	198, 543
PfeI	GAWTC	5 cut(s)	303, 455, 1171, 1238, 1776
PflFI	GACNNNGTC	2 cut(s)	1614, 2069
PfoI	TCCNGGA	1 cut(s)	1166
PkrI	GCNGC	6 cut(s)	17, 483, 561, 1117, 1940, 2006
PleI	GAGTC	2 cut(s)	238, 2066
PpsI	GAGTC	2 cut(s)	238, 2066
PscI	ACATGT	2 cut(s)	612, 1283
Psp6I	CCWGG	4 cut(s)	171, 1166, 1395, 2012
PspEI	GGTNACC	1 cut(s)	71
PspFI	CCCAGC	1 cut(s)	1845
PspGI	CCWGG	4 cut(s)	171, 1166, 1395, 2012
PspN4I	GGNNCC	4 cut(s)	764, 1656, 1810, 1880
PspPI	GGNCC	2 cut(s)	41, 822
PstNI	CAGNNNCTG	1 cut(s)	1370
PsuI	RGATCY	5 cut(s)	371, 1033, 1042, 1163, 1208
PsyI	GACNNNGTC	2 cut(s)	1614, 2069
PvuII	CAGCTG	1 cut(s)	1344
RsaI	GTAC	9 cut(s)	400, 498, 764, 945, 1074, 1079, 1394, 1477, 1784
RsaNI	GTAC	9 cut(s)	399, 497, 763, 944, 1073, 1078, 1393, 1476, 1783
RseI	CAYNNNNRTG	5 cut(s)	66, 120, 817, 992, 1722
SaqAI	TTAA	6 cut(s)	594, 665, 692, 1332, 1676, 1685
SatI	GCNGC	6 cut(s)	16, 482, 560, 1116, 1939, 2005
Sau96I	GGNCC	2 cut(s)	41, 822
ScaI	AGTACT	1 cut(s)	400
SchI	GAGTC	2 cut(s)	238, 2067
ScrFI	CCNGG	4 cut(s)	173, 1168, 1397, 2014
SduI	GDGCHC	1 cut(s)	1719
SexAI	ACCWGGT	1 cut(s)	1395
SfaNI	GCATC	8 cut(s)	611, 1119, 1570, 1743, 1813, 1950, 1954, 2026
SfcI	CTRYAG	2 cut(s)	87, 387
SfuI	TTCGAA	1 cut(s)	1525
SinI	GGWCC	1 cut(s)	822
SmiMI	CAYNNNNRTG	5 cut(s)	66, 120, 817, 992, 1722
SmlI	CTYRAG	1 cut(s)	1491
SmoI	CTYRAG	1 cut(s)	1491
SseBI	AGGCCT	1 cut(s)	972
SsiI	CCGC	1 cut(s)	15
SspI	AATATT	1 cut(s)	884
SspMI	CTAG	5 cut(s)	132, 435, 548, 678, 1850
StuI	AGGCCT	1 cut(s)	972
StyD4I	CCNGG	4 cut(s)	171, 1166, 1395, 2012
TaaI	ACNGT	6 cut(s)	128, 767, 826, 864, 1077, 1763
TaiI	ACGT	2 cut(s)	555, 2070
TaqI	TCGA	7 cut(s)	118, 784, 903, 953, 1018, 1025, 1525
TaqII	GACCGA	1 cut(s)	1550
TatI	WGTACW	3 cut(s)	398, 496, 1077
TauI	GCSGC	1 cut(s)	18
TfiI	GAWTC	5 cut(s)	303, 455, 1171, 1238, 1776
Tru1I	TTAA	6 cut(s)	594, 665, 692, 1332, 1676, 1685
Tru9I	TTAA	6 cut(s)	594, 665, 692, 1332, 1676, 1685
TscAI	CASTG	3 cut(s)	37, 483, 1432
TseFI	GTSAC	5 cut(s)	71, 241, 985, 997, 1177
TseI	GCWGC	5 cut(s)	481, 559, 1115, 1938, 2004
Tsp45I	GTSAC	5 cut(s)	71, 241, 985, 997, 1177
TspDTI	ATGAA	9 cut(s)	50, 243, 432, 503, 939, 969, 1125, 1239, 1434
TspGWI	ACGGA	1 cut(s)	1931
TspRI	CASTG	3 cut(s)	37, 483, 1432
Tth111I	GACNNNGTC	2 cut(s)	1614, 2069
VpaK11BI	GGWCC	1 cut(s)	822
XagI	CCTNNNNNAGG	1 cut(s)	1662
XapI	RAATTY	4 cut(s)	461, 589, 1358, 1855
XbaI	TCTAGA	1 cut(s)	547
XceI	RCATGY	4 cut(s)	616, 816, 1287, 1936
XmnI	GAANNNNTTC	2 cut(s)	198, 543
XspI	CTAG	5 cut(s)	132, 435, 548, 678, 1850
ZrmI	AGTACT	1 cut(s)	400
Zsp2I	ATGCAT	1 cut(s)	818

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.