pycom15g31030

disulfide-isomerase-like

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
29198666 .. 29202137
3472 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1446 bp
ATGGCGTCGTCTTCTAGGGTTTCGCTCTGCTTCTTTCTGCTCCTCGCCGTGTTCGCCACCGCGATTCGCGCCGAGGAGGCGGAATCGAAGGAGTACGTCCTCACTCTCGACAGCTCCAACTTCGATGACACTGTCAGCAAGCACGACTTCATCGTCGTCGAGTTCTACGCCCCCTGGTGTGGCCACTGCAAGAAGCTCGCTCCCGAGGTTGATGCCAATGAAGAGGCAAACAAAGGACTTGCTTCTGATTACGAGGTGAAGGGATTTCCCACAATTAAGATTCTAAGAAATGGTGGGAAGACCATCCAAGAATACAAGGGTCCTCGTGAAGCTGAGGGTATTGTTGAATATTTGAAGAAGCAGAGTGGTCCGGCTTCTGCCGAAATCAAGACAACTGATGAGGCAGCTACTCTTGTTGGCGACAAGAAGATCGTTATTGTTGGTGTGTTCAAGGAGTTCTCTGGAGAGGTGTATAATAACTTCTCAGCTCTGGCTGAGAAATTGCGTTCTGATTATGAATTTGGTCACACTCTCGATGCTAAGCTCCTTCCTCGTGGTGATTCATCAGTGTCTGGACCAATAGTTAGGCTGTTCAAGCCATTTGATGAACTTTTTGTTGATTTTGAGGATTTTCATGTGGATGCTCTAGAGAAGTTTGTTGAAGAATCTAGTTTGCCAATTATTACAGAATTCAACAATGACCCAACCAATCACCCTTTTGTTGTCAAATTCTTTAACAATCCAAATGAGAAGGCCATGTTGTTTCTGAACTTCAGCGGCGAGTCTTCTGATGCTTTTAAATCAACATATCGTGAAGTTGCTGAGAAATATAAGAAAGAAGGCATAAGCTTTCTCATTGGAGATCTTGAGGCTAGTCAGGGCGCCTTCCAGTATTTTGGACTTAAAGAAGACCAGGTGCCTCTCATCATCATCCAGACCCCTGATGGCCAAAAGTTTTTGAAACCAAATTTGCAGCCAGATCACATCACATCATGGGTGATGGAATATAAGGATGGGAAAGTATCACCATACAAGAAGTCTGAACCTATTCCCGAGCCAAACAATGAGCCTGTCAAGGTCGTAGTCGCTGACAACATCCAGGAGTACATCAAGTCTGGGAAAAATGTGTTGCTGGAGTTCTATGCTCCTTGGTGTGGACACTGCAAGAAGCTTGCTCCAATTTTGGATGAAGTTGCAGTCTCATACGAAAAGGATTCCGATGTCGTTATTGCAAAATTTGATGCCACTGCAAATGATGTACCAAGTGACTTCGATGTCAAATACTACCCGACTCTGTACTTCAAGACGGCAAGTGGAAAGGTCTTGTCATATGATGAGGAAGATAGAACTAAGGAAGCCATCGCTGCTTTCATTGAAAAGAACCGGGACAAAATTGAGAAACAAGTAGAGGCCGAGAAACAAGAATCCGGAAAAGATGAGCTCTAA

Protein Analysis

482

Amino Acids

54.07

Weight (kDa)

4.85

Isoelectric Point (pI)

30.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Thioredoxin PF00085 33 - 120 1.5e-19 Thioredoxin
Thioredoxin_6 PF13848 150 - 334 2e-22 Thioredoxin-like domain
Thioredoxin PF00085 358 - 460 9.5e-24 Thioredoxin
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0011915)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 152, 1274
AccB1I GGYRCC 2 cut(s) 881, 916
AccII CGCG 2 cut(s) 62, 69
AccIII TCCGGA 1 cut(s) 1427
AciI CCGC 3 cut(s) 60, 80, 777
AcoI YGGCCR 2 cut(s) 181, 946
AcsI RAATTY 5 cut(s) 518, 689, 728, 967, 1235
AcuI CTGAAG 1 cut(s) 757
AcyI GRCGYC 2 cut(s) 5, 882
AfaI GTAC 4 cut(s) 95, 1106, 1260, 1298
AfiI CCNNNNNNNGG 2 cut(s) 179, 1154
AgsI TTSAA 9 cut(s) 347, 355, 451, 595, 662, 694, 961, 1303, 1376
AjnI CCWGG 3 cut(s) 173, 912, 1098
AluBI AGCT 9 cut(s) 114, 196, 332, 407, 488, 544, 849, 1171, 1441
AluI AGCT 9 cut(s) 114, 196, 332, 407, 488, 544, 849, 1171, 1441
Alw21I GWGCWC 1 cut(s) 1443
Alw26I GTCTC 1 cut(s) 1204
AlwNI CAGNNNCTG 1 cut(s) 572
Ama87I CYCGRG 2 cut(s) 203, 1052
Aor13HI TCCGGA 1 cut(s) 1427
AoxI GGCC 4 cut(s) 181, 753, 946, 1410
ApeKI GCWGC 3 cut(s) 404, 973, 1364
ApoI RAATTY 5 cut(s) 518, 689, 728, 967, 1235
Asp700I GAANNNNTTC 1 cut(s) 1047
AspLEI GCGC 2 cut(s) 71, 884
AspS9I GGNCC 3 cut(s) 320, 368, 575
AsuC2I CCSGG 1 cut(s) 1385
AsuHPI GGTGA 5 cut(s) 268, 569, 704, 1009, 1017
AvaI CYCGRG 2 cut(s) 203, 1052
AvaII GGWCC 3 cut(s) 320, 368, 575
BalI TGGCCA 2 cut(s) 183, 948
BanI GGYRCC 2 cut(s) 881, 916
BanII GRGCYC 1 cut(s) 1443
BarI GAAGNNNNNNTAC 2 cut(s) 464, 496
BauI CACGAG 2 cut(s) 324, 552
BbsI GAAGAC 4 cut(s) 3, 305, 777, 915
Bbv12I GWGCWC 1 cut(s) 1443
BbvCI CCTCAGC 1 cut(s) 333
BbvI GCAGC 3 cut(s) 416, 985, 1351
BccI CCATC 5 cut(s) 311, 938, 994, 1007, 1367
BceAI ACGGC 2 cut(s) 32, 1323
BcgI CGANNNNNNTGC 4 cut(s) 178, 194, 212, 228
BciT130I CCWGG 3 cut(s) 175, 914, 1100
BcnI CCSGG 1 cut(s) 1385
BcoDI GTCTC 1 cut(s) 1204
BfaI CTAG 4 cut(s) 15, 647, 669, 873
BfoI RGCGCY 1 cut(s) 885
BglI GCCNNNNNGGC 1 cut(s) 77
BglII AGATCT 1 cut(s) 862
BisI GCNGC 4 cut(s) 405, 778, 974, 1365
BlpI GCTNAGC 1 cut(s) 540
BlsI GCNGC 4 cut(s) 406, 779, 975, 1366
Bme1390I CCNGG 4 cut(s) 175, 914, 1100, 1385
Bme18I GGWCC 3 cut(s) 320, 368, 575
BmeT110I CYCGRG 2 cut(s) 203, 1052
BmgT120I GGNCC 3 cut(s) 320, 368, 575
BmiI GGNNCC 3 cut(s) 321, 883, 918
BmrFI CCNGG 4 cut(s) 175, 914, 1100, 1385
BmsI GCATC 5 cut(s) 202, 526, 631, 781, 1231
BpiI GAAGAC 4 cut(s) 3, 305, 777, 915
BpmI CTGGAG 2 cut(s) 483, 1154
Bpu10I CCTNAGC 1 cut(s) 333
Bpu1102I GCTNAGC 1 cut(s) 540
BpuEI CTTGAG 1 cut(s) 887
BpuMI CCSGG 1 cut(s) 1385
BsaHI GRCGYC 2 cut(s) 5, 882
BsaJI CCNNGG 4 cut(s) 72, 173, 204, 1148
BsaWI WCCGGW 1 cut(s) 1427
Bsc4I CCNNNNNNNGG 2 cut(s) 179, 1154
Bse1I ACTGG 1 cut(s) 889
BseAI TCCGGA 1 cut(s) 1427
BseBI CCWGG 3 cut(s) 175, 914, 1100
BseDI CCNNGG 4 cut(s) 72, 173, 204, 1148
BseGI GGATG 6 cut(s) 303, 646, 930, 1018, 1095, 1192
BseLI CCNNNNNNNGG 2 cut(s) 179, 1154
BseMII CTCAG 4 cut(s) 324, 486, 498, 813
BseNI ACTGG 1 cut(s) 889
BseRI GAGGAG 2 cut(s) 32, 89
BseXI GCAGC 3 cut(s) 416, 985, 1351
Bsh1236I CGCG 2 cut(s) 62, 69
BshFI GGCC 4 cut(s) 183, 755, 948, 1412
BshNI GGYRCC 2 cut(s) 881, 916
BsiHKAI GWGCWC 1 cut(s) 1443
BsiHKCI CYCGRG 2 cut(s) 203, 1052
BsiSI CCGG 3 cut(s) 371, 1384, 1428
BslFI GGGAC 1 cut(s) 1400
BslI CCNNNNNNNGG 2 cut(s) 179, 1154
BsmAI GTCTC 1 cut(s) 1204
BsmFI GGGAC 1 cut(s) 1400
BsnI GGCC 4 cut(s) 183, 755, 948, 1412
BsoBI CYCGRG 2 cut(s) 203, 1052
Bsp1286I GDGCHC 1 cut(s) 1443
Bsp13I TCCGGA 1 cut(s) 1427
Bsp143I GATC 3 cut(s) 429, 862, 979
Bsp1720I GCTNAGC 1 cut(s) 540
BspACI CCGC 3 cut(s) 60, 80, 777
BspANI GGCC 4 cut(s) 183, 755, 948, 1412
BspCNI CTCAG 4 cut(s) 325, 487, 497, 814
BspEI TCCGGA 1 cut(s) 1427
BspFNI CGCG 2 cut(s) 62, 69
BspLI GGNNCC 3 cut(s) 321, 883, 918
BspT107I GGYRCC 2 cut(s) 881, 916
BsrI ACTGG 1 cut(s) 889
BssECI CCNNGG 4 cut(s) 72, 173, 204, 1148
BssMI GATC 3 cut(s) 429, 862, 979
BssNI GRCGYC 2 cut(s) 5, 882
BssSI CACGAG 2 cut(s) 324, 552
BssT1I CCWWGG 1 cut(s) 1148
Bst2BI CACGAG 2 cut(s) 324, 552
Bst2UI CCWGG 3 cut(s) 175, 914, 1100
Bst4CI ACNGT 1 cut(s) 133
Bst6I CTCTTC 1 cut(s) 216
BstACI GRCGYC 2 cut(s) 5, 882
BstC8I GCNNGC 3 cut(s) 140, 198, 1173
BstDEI CTNAG 7 cut(s) 284, 333, 484, 495, 540, 822, 1350
BstF5I GGATG 6 cut(s) 303, 646, 930, 1018, 1095, 1192
BstFNI CGCG 2 cut(s) 62, 69
BstH2I RGCGCY 1 cut(s) 885
BstHHI GCGC 2 cut(s) 71, 884
BstKTI GATC 3 cut(s) 432, 865, 982
BstMAI GTCTC 1 cut(s) 1204
BstMBI GATC 3 cut(s) 429, 862, 979
BstMWI GCNNNNNNNGC 5 cut(s) 53, 68, 77, 595, 1364
BstNI CCWGG 3 cut(s) 175, 914, 1100
BstSCI CCNGG 4 cut(s) 173, 912, 1098, 1383
BstUI CGCG 2 cut(s) 62, 69
BstV1I GCAGC 3 cut(s) 416, 985, 1351
BstV2I GAAGAC 4 cut(s) 3, 305, 777, 915
BstX2I RGATCY 1 cut(s) 862
BstXI CCANNNNNNTGG 1 cut(s) 896
BstYI RGATCY 1 cut(s) 862
BsuRI GGCC 4 cut(s) 183, 755, 948, 1412
BtgZI GCGATG 1 cut(s) 1345
BtsCI GGATG 6 cut(s) 303, 646, 930, 1018, 1095, 1192
BtsI GCAGTG 3 cut(s) 184, 1159, 1245
BtsIMutI CAGTG 5 cut(s) 129, 184, 573, 1159, 1245
Cac8I GCNNGC 3 cut(s) 140, 198, 1173
CaiI CAGNNNCTG 1 cut(s) 572
CfoI GCGC 2 cut(s) 71, 884
Cfr13I GGNCC 3 cut(s) 320, 368, 575
CsiI ACCWGGT 1 cut(s) 912
Csp6I GTAC 4 cut(s) 94, 1105, 1259, 1297
CviAII CATG 3 cut(s) 635, 757, 993
CviQI GTAC 4 cut(s) 94, 1105, 1259, 1297
DdeI CTNAG 7 cut(s) 284, 333, 484, 495, 540, 822, 1350
DinI GGCGCC 1 cut(s) 883
DpnI GATC 3 cut(s) 431, 864, 981
DpnII GATC 3 cut(s) 429, 862, 979
DraI TTTAAA 1 cut(s) 799
DrdI GACNNNNNNGTC 2 cut(s) 152, 1274
DseDI GACNNNNNNGTC 2 cut(s) 152, 1274
EaeI YGGCCR 2 cut(s) 181, 946
Eam1104I CTCTTC 1 cut(s) 216
EarI CTCTTC 1 cut(s) 216
EciI GGCGGA 1 cut(s) 95
Ecl136II GAGCTC 1 cut(s) 1441
Eco130I CCWWGG 1 cut(s) 1148
Eco24I GRGCYC 1 cut(s) 1443
Eco47I GGWCC 3 cut(s) 320, 368, 575
Eco53kI GAGCTC 1 cut(s) 1441
Eco57I CTGAAG 1 cut(s) 757
Eco88I CYCGRG 2 cut(s) 203, 1052
EcoICRI GAGCTC 1 cut(s) 1441
EcoO109I RGGNCCY 1 cut(s) 320
EcoRI GAATTC 1 cut(s) 689
EcoRII CCWGG 3 cut(s) 173, 912, 1098
EcoT14I CCWWGG 1 cut(s) 1148
EcoT38I GRGCYC 1 cut(s) 1443
EgeI GGCGCC 1 cut(s) 883
EheI GGCGCC 1 cut(s) 883
ErhI CCWWGG 1 cut(s) 1148
FaeI CATG 3 cut(s) 638, 760, 996
FalI AAGNNNNNCTT 2 cut(s) 131, 163
FaqI GGGAC 1 cut(s) 1400
FatI CATG 3 cut(s) 634, 756, 992
FauNDI CATATG 1 cut(s) 1330
Fnu4HI GCNGC 4 cut(s) 405, 778, 974, 1365
FokI GGATG 6 cut(s) 290, 653, 917, 1025, 1082, 1199
FriOI GRGCYC 1 cut(s) 1443
Fsp4HI GCNGC 4 cut(s) 405, 778, 974, 1365
FspBI CTAG 4 cut(s) 15, 647, 669, 873
GlaI GCGC 2 cut(s) 70, 883
GluI GCNGC 4 cut(s) 405, 778, 974, 1365
GsuI CTGGAG 2 cut(s) 483, 1154
HaeII RGCGCY 1 cut(s) 885
HaeIII GGCC 4 cut(s) 183, 755, 948, 1412
HapII CCGG 3 cut(s) 371, 1384, 1428
HhaI GCGC 2 cut(s) 71, 884
Hin1I GRCGYC 2 cut(s) 5, 882
Hin1II CATG 3 cut(s) 638, 760, 996
Hin6I GCGC 2 cut(s) 69, 882
HinP1I GCGC 2 cut(s) 69, 882
HindIII AAGCTT 2 cut(s) 847, 1169
HinfI GANTC 9 cut(s) 64, 83, 280, 560, 665, 782, 1214, 1291, 1424
HpaII CCGG 3 cut(s) 371, 1384, 1428
HphI GGTGA 5 cut(s) 268, 569, 704, 1009, 1017
Hpy166II GTNNAC 1 cut(s) 1157
Hpy188I TCNGA 6 cut(s) 247, 511, 768, 790, 1042, 1219
Hpy8I GTNNAC 1 cut(s) 1157
Hpy99I CGWCG 3 cut(s) 10, 158, 161
HpyAV CCTTC 6 cut(s) 82, 253, 557, 745, 833, 895
HpyCH4III ACNGT 1 cut(s) 133
HpyCH4IV ACGT 1 cut(s) 96
HpyCH4V TGCA 6 cut(s) 189, 973, 1164, 1196, 1232, 1250
HpyF10VI GCNNNNNNNGC 5 cut(s) 53, 68, 77, 595, 1364
HpyF3I CTNAG 7 cut(s) 284, 333, 484, 495, 540, 822, 1350
HpySE526I ACGT 1 cut(s) 96
Hsp92I GRCGYC 2 cut(s) 5, 882
Hsp92II CATG 3 cut(s) 638, 760, 996
HspAI GCGC 2 cut(s) 69, 882
KasI GGCGCC 1 cut(s) 881
Kpn2I TCCGGA 1 cut(s) 1427
Kzo9I GATC 3 cut(s) 429, 862, 979
LmnI GCTCC 6 cut(s) 45, 119, 205, 549, 1150, 1180
Lsp1109I GCAGC 3 cut(s) 416, 985, 1351
LweI GCATC 5 cut(s) 202, 526, 631, 781, 1231
MabI ACCWGGT 1 cut(s) 912
MaeI CTAG 4 cut(s) 15, 647, 669, 873
MaeII ACGT 1 cut(s) 96
MaeIII GTNAC 2 cut(s) 524, 1265
MalI GATC 3 cut(s) 431, 864, 981
MboI GATC 3 cut(s) 429, 862, 979
MboII GAAGA 9 cut(s) 3, 233, 310, 367, 439, 674, 777, 920, 1352
MflI RGATCY 1 cut(s) 862
MhlI GDGCHC 1 cut(s) 1443
MlsI TGGCCA 2 cut(s) 183, 948
MluNI TGGCCA 2 cut(s) 183, 948
Mly113I GGCGCC 1 cut(s) 882
MlyI GAGTC 2 cut(s) 791, 1285
MmeI TCCRAC 1 cut(s) 141
Mox20I TGGCCA 2 cut(s) 183, 948
MroI TCCGGA 1 cut(s) 1427
MroXI GAANNNNTTC 1 cut(s) 1047
MscI TGGCCA 2 cut(s) 183, 948
MseI TTAA 4 cut(s) 276, 735, 798, 903
MslI CAYNNNNRTG 1 cut(s) 639
Msp20I TGGCCA 2 cut(s) 183, 948
MspA1I CMGCKG 1 cut(s) 777
MspI CCGG 3 cut(s) 371, 1384, 1428
MspR9I CCNGG 4 cut(s) 175, 914, 1100, 1385
MvaI CCWGG 3 cut(s) 175, 914, 1100
MvnI CGCG 2 cut(s) 62, 69
MwoI GCNNNNNNNGC 5 cut(s) 53, 68, 77, 595, 1364
NarI GGCGCC 1 cut(s) 882
NciI CCSGG 1 cut(s) 1385
NdeI CATATG 1 cut(s) 1330
NdeII GATC 3 cut(s) 429, 862, 979
NlaIII CATG 3 cut(s) 638, 760, 996
NlaIV GGNNCC 3 cut(s) 321, 883, 918
NmeAIII GCCGAG 2 cut(s) 97, 1438
NmuCI GTSAC 2 cut(s) 524, 1265
PcsI WCGNNNNNNNCGW 1 cut(s) 150
PdmI GAANNNNTTC 1 cut(s) 1047
PfeI GAWTC 7 cut(s) 64, 83, 280, 560, 665, 1214, 1424
PflFI GACNNNGTC 1 cut(s) 131
PfoI TCCNGGA 1 cut(s) 1098
PkrI GCNGC 4 cut(s) 406, 779, 975, 1366
PleI GAGTC 2 cut(s) 790, 1285
PluTI GGCGCC 1 cut(s) 885
PpsI GAGTC 2 cut(s) 790, 1285
PpuMI RGGWCCY 1 cut(s) 320
Psp124BI GAGCTC 1 cut(s) 1443
Psp5II RGGWCCY 1 cut(s) 320
Psp6I CCWGG 3 cut(s) 173, 912, 1098
PspGI CCWGG 3 cut(s) 173, 912, 1098
PspN4I GGNNCC 3 cut(s) 321, 883, 918
PspPI GGNCC 3 cut(s) 320, 368, 575
PspPPI RGGWCCY 1 cut(s) 320
PstNI CAGNNNCTG 1 cut(s) 572
PsuI RGATCY 1 cut(s) 862
PsyI GACNNNGTC 1 cut(s) 131
RsaI GTAC 4 cut(s) 95, 1106, 1260, 1298
RsaNI GTAC 4 cut(s) 94, 1105, 1259, 1297
RseI CAYNNNNRTG 1 cut(s) 639
SacI GAGCTC 1 cut(s) 1443
SaqAI TTAA 4 cut(s) 276, 735, 798, 903
SatI GCNGC 4 cut(s) 405, 778, 974, 1365
Sau3AI GATC 3 cut(s) 429, 862, 979
Sau96I GGNCC 3 cut(s) 320, 368, 575
SchI GAGTC 2 cut(s) 791, 1285
ScrFI CCNGG 4 cut(s) 175, 914, 1100, 1385
SduI GDGCHC 1 cut(s) 1443
SexAI ACCWGGT 1 cut(s) 912
SfaNI GCATC 5 cut(s) 202, 526, 631, 781, 1231
SfoI GGCGCC 1 cut(s) 883
SinI GGWCC 3 cut(s) 320, 368, 575
SmiMI CAYNNNNRTG 1 cut(s) 639
SmlI CTYRAG 1 cut(s) 866
SmoI CTYRAG 1 cut(s) 866
SsiI CCGC 3 cut(s) 60, 80, 777
SspDI GGCGCC 1 cut(s) 881
SspI AATATT 1 cut(s) 350
SspMI CTAG 4 cut(s) 15, 647, 669, 873
SstI GAGCTC 1 cut(s) 1443
StyD4I CCNGG 4 cut(s) 173, 912, 1098, 1383
StyI CCWWGG 1 cut(s) 1148
TaaI ACNGT 1 cut(s) 133
TaiI ACGT 1 cut(s) 99
TaqI TCGA 6 cut(s) 86, 108, 123, 159, 534, 1272
TatI WGTACW 2 cut(s) 1104, 1296
TauI GCSGC 1 cut(s) 780
TfiI GAWTC 7 cut(s) 64, 83, 280, 560, 665, 1214, 1424
Tru1I TTAA 4 cut(s) 276, 735, 798, 903
Tru9I TTAA 4 cut(s) 276, 735, 798, 903
TscAI CASTG 5 cut(s) 136, 191, 573, 1166, 1252
TseFI GTSAC 2 cut(s) 524, 1265
TseI GCWGC 3 cut(s) 404, 973, 1364
Tsp45I GTSAC 2 cut(s) 524, 1265
TspDTI ATGAA 8 cut(s) 139, 234, 531, 552, 621, 623, 1203, 1360
TspRI CASTG 5 cut(s) 136, 191, 573, 1166, 1252
Tth111I GACNNNGTC 1 cut(s) 131
VpaK11BI GGWCC 3 cut(s) 320, 368, 575
XapI RAATTY 5 cut(s) 518, 689, 728, 967, 1235
XbaI TCTAGA 1 cut(s) 646
XcmI CCANNNNNNNNNTGG 1 cut(s) 941
XmnI GAANNNNTTC 1 cut(s) 1047
XspI CTAG 4 cut(s) 15, 647, 669, 873
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.