Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0004637

Physical Location & Seq

Genomic Coordinates Forward (+)

31110013 .. 31114385

Gene Structure 4373 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1680 bp

ATGGTTTACACGGAGGCTCAGCCTGGTTTATTTCTGGGGTTTAACTCCCATCACAATACGACGTCGTCGAATTCAGTCCAATCCGTCCCGCTCCAGCTGCTCGATCAGAACGAAGAGAAAATTAGGGCCGAGAACGGGGACGATCGCGACGGAGACGAGAAATTTAACCTCTTGGGGCACTCGATTTGCCCGAAGAGGCCGAGGGACGGGTCCGGGTTCGGAGCGAACCCGGCCAAATGTTTGGCGGTTGAGTCCGGTGGGCTCGAGGCGAGGCGAGCGGCGGTCCGGTCTTGGGGGAACCAACCGCTCGCGGTTTCGGATCCGGAGATCCATGAAATTATGGAGAAGGAGAGGCATCGCCAGTACAAAGGCATTGAATTGATAGCTTCCGAGAATTTCGTTTGCAGGGCTGTGATGGAAGCTCTGGGCAGCCACTTGACGAACAAGTACTCCGAGGGTTTTCCCGGAGCAAGATACTACACGGGCAATCAGCACATTGATCAGATTGAATTGCTTTGTTGTGAACGGGCATTGGCGGCTTTCGGTCTCGATTCGGATAAATGGGGTGTCAATGTCCAGCCTTACTCGTGTACCTCTGCAAATTTCGCAGTCTACACTGGGCTTTTGCTCCCGAATGATCGGATTATGGGGTTGGATTCTCCTTCTGGAGGGCACATGAGTCATGGGTATTATACCCCTAGTGGGAAGAAGGTCTCGGCTGCCTCGATTTTCTTTGAGAGTCTGCCTTATAAGGTGAACCCACAAACAGGGTACATTGATTATGATAAGATTGAGGAGAAGGCGGTTGATTATCGCCCCAAGATACTTATTTGCGGTGGGAGTTCATACCCTCGGGAGTGGGATTATGCCAGGTTTAGGCAGATTGCGGATAAATGTGGAGCTGTGTTGATGTGTGACATGGCTCATATCAGCGGTCTTACGGCAGCTAAGGAATGTGCAAGTCCTTTTGATTATTGTGATATTGTCACGTCAACAACTCACAAAAGTCTTCGGGGTCCAAGGGGAGGCATTATTTTTTACAGAAAAGGCCCAAAATTAAGGAAGCAAGGCATGCATCATACTAATGCGGATGGTAGTAACCATTATGATTTTGAGGAAAAGATAAACTTTGCTGTTTTCCCATCACTACAAGGAGGGCCACACAACAACCATATTGCTGCTCTTGCCATAGCCTTAAAACAAGTAGCTACTCCAGAATATAAAGCATACATGCAACAGGTGAAGAAGAATGCACAGGCCTTAGCTAATGCCTTGTTAAGAAGAAAATGCAAATTGGTAACTGGGGGCACCGACAATCACTTGTTGCTTTGGGATCTGACCGCTCTTGGTTTAACAGGGAGGAATTATGAAAAGGTTTGTGAGATGTGCCACATTACTCTCAATAAAACTGCTATATTTGGTGATAATGGTGCTTTTTCTCCTGGGGGAGTGAGAATCGGTACTCCTGCTATGACTACCAGAGGTTGTGTGGAATCCGATTTCGAAACGATCGCAGATTTTCTTCTGAGGGCTGCCCAGATCACTGTTTGTATACAGAGGGAATATGGAAAACTCCAGAAAGATTTTATCAAAGGTCTCCACAACAACAAAGATATTGTCGAGCTCAGAAATCGGGTCGAAACATTTGCATCCCAGTTTGAAATGCCAGGATATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004372 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005739 GO:0005759 GO:0006730 GO:0006732 GO:0006790 GO:0008150 GO:0008152 GO:0009987 GO:0010035 GO:0010038 GO:0016740 GO:0016741 GO:0016742 GO:0017144 GO:0019219 GO:0019222 GO:0031323 GO:0031974 GO:0042221 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044030 GO:0044237 GO:0044281 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046500 GO:0046686 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051052 GO:0051171 GO:0051186 GO:0055063 GO:0055081 GO:0060255 GO:0065007 GO:0065008 GO:0070013 GO:0071704 GO:0072505 GO:0080090 GO:0098771

KEGG Pathways

Metabolic & Signaling

ko00260 ko00460 ko00630 ko00670 ko00680 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko01523 map00260 map00460 map00630 map00670 map00680 map01100 map01110 map01120 map01130 map01200 map01230 map01523

Pfam Domains

Protein Families

SHMT

Protein Analysis

560

Amino Acids

61.92

Weight (kDa)

7.26

Isoelectric Point (pI)

42.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SHMT	PF00464	104 - 507	9.1e-174	Serine hydroxymethyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004637)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22020 AT1G22020 AT1G36370
fragaria_vesca	FvH4_5g28970 FvH4_5g38450 FvH4_5g38450
malus_domestica	MD04G1132900.v1.1 MD12G1145600.v1.1
prunus_persica	Prupe.1G507500_v2.0.a1 Prupe.1G507600_v2.0.a1
pyrus_communis	pycom04g12080 pycom12g13990 pycom15g32210
rosa_chinensis	RchiOBHm_Chr7g0221291 RchiOBHm_Chr7g0240491
rosa_laevigata	RLG00000000675 RLG00000002164
rosa_multiflora	Rmu_sc0000324.1_g000020 Rmu_sc0005327.1_g000009
rosa_roxburghii	Rroxscaffold_3G00219940 Rroxscaffold_3G00238440
rosa_rugosa	Rorug07G0202000 Rorug07G0336600
rosa_samantha	Rh7AG341100 Rh7AG491000 Rh7BG332100 Rh7BG463500 Rh7CG359000 Rh7CG507100
rosa_wichuraiana	Rw7G029010 Rw7G041140

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	750
AatII	GACGTC	1 cut(s)	65
AccB1I	GGYRCC	1 cut(s)	1307
AccBSI	CCGCTC	4 cut(s)	91, 278, 307, 1343
AccI	GTMKAC	2 cut(s)	612, 1552
AccII	CGCG	2 cut(s)	147, 311
AccIII	TCCGGA	1 cut(s)	322
AclWI	GGATC	4 cut(s)	314, 322, 327, 1341
AcoI	YGGCCR	1 cut(s)	231
AcsI	RAATTY	4 cut(s)	70, 161, 394, 601
AcyI	GRCGYC	1 cut(s)	62
AfaI	GTAC	5 cut(s)	365, 449, 592, 773, 1462
AfiI	CCNNNNNNNGG	8 cut(s)	135, 206, 292, 668, 702, 767, 876, 1025
AgsI	TTSAA	3 cut(s)	377, 509, 1661
AjiI	CACGTC	1 cut(s)	990
AjnI	CCWGG	4 cut(s)	22, 869, 1441, 1666
AloI	GAACNNNNNNTCC	2 cut(s)	434, 466
AluBI	AGCT	8 cut(s)	97, 386, 422, 902, 947, 1208, 1265, 1624
AluI	AGCT	8 cut(s)	97, 386, 422, 902, 947, 1208, 1265, 1624
Alw21I	GWGCWC	1 cut(s)	1626
Alw26I	GTCTC	4 cut(s)	147, 551, 718, 1601
AlwI	GGATC	4 cut(s)	314, 322, 327, 1341
Ama87I	CYCGRG	2 cut(s)	263, 852
Aor13HI	TCCGGA	1 cut(s)	322
AoxI	GGCC	6 cut(s)	126, 197, 231, 1048, 1157, 1257
ApeKI	GCWGC	6 cut(s)	97, 429, 719, 944, 1178, 1532
ApoI	RAATTY	4 cut(s)	70, 161, 394, 601
ArsI	GACNNNNNNTTYG	2 cut(s)	1602, 1634
AspS9I	GGNCC	6 cut(s)	126, 210, 283, 1016, 1049, 1157
AsuC2I	CCSGG	3 cut(s)	214, 230, 465
AsuHPI	GGTGA	3 cut(s)	766, 1252, 1433
AsuII	TTCGAA	1 cut(s)	1503
AvaI	CYCGRG	2 cut(s)	263, 852
AvaII	GGWCC	3 cut(s)	210, 283, 1016
BaeGI	GKGCMC	3 cut(s)	180, 675, 1310
BaeI	ACNNNNGTAYC	2 cut(s)	574, 607
BamHI	GGATCC	1 cut(s)	319
BanI	GGYRCC	1 cut(s)	1307
BanII	GRGCYC	2 cut(s)	264, 1626
BauI	CACGAG	1 cut(s)	586
BbsI	GAAGAC	1 cut(s)	1001
Bbv12I	GWGCWC	1 cut(s)	1626
BbvI	GCAGC	6 cut(s)	84, 441, 706, 956, 1165, 1519
BccI	CCATC	4 cut(s)	57, 409, 1085, 1150
BceAI	ACGGC	1 cut(s)	957
BcgI	CGANNNNNNTGC	2 cut(s)	1628, 1662
BciT130I	CCWGG	4 cut(s)	24, 871, 1443, 1668
BclI	TGATCA	1 cut(s)	499
BcnI	CCSGG	3 cut(s)	214, 230, 465
BcoDI	GTCTC	4 cut(s)	147, 551, 718, 1601
BfaI	CTAG	1 cut(s)	699
BisI	GCNGC	8 cut(s)	98, 279, 430, 537, 720, 945, 1179, 1533
BlpI	GCTNAGC	1 cut(s)	18
BlsI	GCNGC	8 cut(s)	99, 280, 431, 538, 721, 946, 1180, 1534
BmcAI	AGTACT	1 cut(s)	449
Bme1390I	CCNGG	7 cut(s)	24, 214, 230, 465, 871, 1443, 1668
Bme18I	GGWCC	3 cut(s)	210, 283, 1016
BmeT110I	CYCGRG	2 cut(s)	263, 852
BmgBI	CACGTC	1 cut(s)	990
BmgT120I	GGNCC	6 cut(s)	126, 210, 283, 1016, 1049, 1157
BmiI	GGNNCC	5 cut(s)	211, 299, 321, 1017, 1309
BmrFI	CCNGG	7 cut(s)	24, 214, 230, 465, 871, 1443, 1668
BmrI	ACTGGG	3 cut(s)	627, 1311, 1648
BmsI	GCATC	3 cut(s)	364, 1084, 1658
BmuI	ACTGGG	3 cut(s)	627, 1311, 1648
BpiI	GAAGAC	1 cut(s)	1001
BpmI	CTGGAG	4 cut(s)	77, 687, 1197, 1559
Bpu10I	CCTNAGC	2 cut(s)	948, 1261
Bpu1102I	GCTNAGC	1 cut(s)	18
Bpu14I	TTCGAA	1 cut(s)	1503
BpuMI	CCSGG	3 cut(s)	214, 230, 465
BsaHI	GRCGYC	1 cut(s)	62
BsaI	GGTCTC	3 cut(s)	551, 718, 1601
BsaJI	CCNNGG	5 cut(s)	200, 453, 851, 1019, 1442
BsaWI	WCCGGW	3 cut(s)	254, 285, 322
BsaXI	ACNNNNNCTCC	2 cut(s)	434, 464
Bsc4I	CCNNNNNNNGG	8 cut(s)	135, 206, 292, 668, 702, 767, 876, 1025
Bse1I	ACTGG	4 cut(s)	361, 622, 1306, 1654
BseAI	TCCGGA	1 cut(s)	322
BseBI	CCWGG	4 cut(s)	24, 871, 1443, 1668
BseDI	CCNNGG	5 cut(s)	200, 453, 851, 1019, 1442
BseGI	GGATG	2 cut(s)	1096, 1649
BseLI	CCNNNNNNNGG	8 cut(s)	135, 206, 292, 668, 702, 767, 876, 1025
BseMII	CTCAG	3 cut(s)	32, 1517, 1639
BseNI	ACTGG	4 cut(s)	361, 622, 1306, 1654
BseRI	GAGGAG	1 cut(s)	809
BseSI	GKGCMC	3 cut(s)	180, 675, 1310
BseXI	GCAGC	6 cut(s)	84, 441, 706, 956, 1165, 1519
Bsh1236I	CGCG	2 cut(s)	147, 311
Bsh1285I	CGRYCG	2 cut(s)	145, 1512
BshFI	GGCC	6 cut(s)	128, 199, 233, 1050, 1159, 1259
BshNI	GGYRCC	1 cut(s)	1307
BsiEI	CGRYCG	2 cut(s)	145, 1512
BsiHKAI	GWGCWC	1 cut(s)	1626
BsiHKCI	CYCGRG	2 cut(s)	263, 852
BsiSI	CCGG	6 cut(s)	213, 230, 255, 286, 323, 465
BslFI	GGGAC	3 cut(s)	71, 152, 218
BslI	CCNNNNNNNGG	8 cut(s)	135, 206, 292, 668, 702, 767, 876, 1025
BsmAI	GTCTC	4 cut(s)	147, 551, 718, 1601
BsmBI	CGTCTC	1 cut(s)	147
BsmFI	GGGAC	3 cut(s)	71, 152, 218
BsmI	GAATGC	1 cut(s)	1255
BsnI	GGCC	6 cut(s)	128, 199, 233, 1050, 1159, 1259
Bso31I	GGTCTC	3 cut(s)	551, 718, 1601
BsoBI	CYCGRG	2 cut(s)	263, 852
Bsp119I	TTCGAA	1 cut(s)	1503
Bsp1286I	GDGCHC	5 cut(s)	180, 264, 675, 1310, 1626
Bsp13I	TCCGGA	1 cut(s)	322
Bsp143I	GATC	9 cut(s)	103, 142, 319, 327, 499, 637, 1333, 1509, 1539
Bsp1720I	GCTNAGC	1 cut(s)	18
Bsp68I	TCGCGA	1 cut(s)	147
BspANI	GGCC	6 cut(s)	128, 199, 233, 1050, 1159, 1259
BspCNI	CTCAG	3 cut(s)	31, 1518, 1638
BspEI	TCCGGA	1 cut(s)	322
BspFNI	CGCG	2 cut(s)	147, 311
BspLI	GGNNCC	5 cut(s)	211, 299, 321, 1017, 1309
BspPI	GGATC	4 cut(s)	314, 322, 327, 1341
BspT104I	TTCGAA	1 cut(s)	1503
BspT107I	GGYRCC	1 cut(s)	1307
BspTNI	GGTCTC	3 cut(s)	551, 718, 1601
BsrBI	CCGCTC	4 cut(s)	91, 278, 307, 1343
BsrI	ACTGG	4 cut(s)	361, 622, 1306, 1654
BssECI	CCNNGG	5 cut(s)	200, 453, 851, 1019, 1442
BssMI	GATC	9 cut(s)	103, 142, 319, 327, 499, 637, 1333, 1509, 1539
BssNAI	GTATAC	1 cut(s)	1553
BssNI	GRCGYC	1 cut(s)	62
BssSI	CACGAG	1 cut(s)	586
BssT1I	CCWWGG	1 cut(s)	1019
Bst1107I	GTATAC	1 cut(s)	1553
Bst2BI	CACGAG	1 cut(s)	586
Bst2UI	CCWGG	4 cut(s)	24, 871, 1443, 1668
Bst4CI	ACNGT	1 cut(s)	1546
Bst6I	CTCTTC	2 cut(s)	108, 188
BstACI	GRCGYC	1 cut(s)	62
BstAPI	GCANNNNNTGC	1 cut(s)	1072
BstBI	TTCGAA	1 cut(s)	1503
BstC8I	GCNNGC	3 cut(s)	276, 309, 1073
BstDEI	CTNAG	5 cut(s)	18, 948, 1261, 1526, 1625
BstENI	CCTNNNNNAGG	1 cut(s)	666
BstF5I	GGATG	2 cut(s)	1096, 1649
BstFNI	CGCG	2 cut(s)	147, 311
BstKTI	GATC	9 cut(s)	106, 145, 322, 330, 502, 640, 1336, 1512, 1542
BstMAI	GTCTC	4 cut(s)	147, 551, 718, 1601
BstMBI	GATC	9 cut(s)	103, 142, 319, 327, 499, 637, 1333, 1509, 1539
BstMCI	CGRYCG	2 cut(s)	145, 1512
BstMWI	GCNNNNNNNGC	7 cut(s)	97, 230, 275, 536, 605, 1072, 1184
BstNI	CCWGG	4 cut(s)	24, 871, 1443, 1668
BstNSI	RCATGY	2 cut(s)	1075, 1234
BstSCI	CCNGG	7 cut(s)	22, 212, 228, 463, 869, 1441, 1666
BstSLI	GKGCMC	3 cut(s)	180, 675, 1310
BstUI	CGCG	2 cut(s)	147, 311
BstV1I	GCAGC	6 cut(s)	84, 441, 706, 956, 1165, 1519
BstV2I	GAAGAC	1 cut(s)	1001
BstX2I	RGATCY	3 cut(s)	319, 327, 1333
BstXI	CCANNNNNNTGG	1 cut(s)	241
BstYI	RGATCY	3 cut(s)	319, 327, 1333
BstZ17I	GTATAC	1 cut(s)	1553
BsuRI	GGCC	6 cut(s)	128, 199, 233, 1050, 1159, 1259
BtgZI	GCGATG	1 cut(s)	341
BtrI	CACGTC	1 cut(s)	990
BtsCI	GGATG	2 cut(s)	1096, 1649
BtsIMutI	CAGTG	2 cut(s)	615, 1542
BtuMI	TCGCGA	1 cut(s)	147
Cac8I	GCNNGC	3 cut(s)	276, 309, 1073
Cfr13I	GGNCC	6 cut(s)	126, 210, 283, 1016, 1049, 1157
CpoI	CGGWCCG	1 cut(s)	283
Csp6I	GTAC	5 cut(s)	364, 448, 591, 772, 1461
CspI	CGGWCCG	1 cut(s)	283
CviAII	CATG	6 cut(s)	332, 676, 683, 919, 1072, 1231
CviQI	GTAC	5 cut(s)	364, 448, 591, 772, 1461
DdeI	CTNAG	5 cut(s)	18, 948, 1261, 1526, 1625
DpnI	GATC	9 cut(s)	105, 144, 321, 329, 501, 639, 1335, 1511, 1541
DpnII	GATC	9 cut(s)	103, 142, 319, 327, 499, 637, 1333, 1509, 1539
EaeI	YGGCCR	1 cut(s)	231
Eam1104I	CTCTTC	2 cut(s)	108, 188
EarI	CTCTTC	2 cut(s)	108, 188
Ecl136II	GAGCTC	1 cut(s)	1624
Eco130I	CCWWGG	1 cut(s)	1019
Eco147I	AGGCCT	1 cut(s)	1259
Eco24I	GRGCYC	2 cut(s)	264, 1626
Eco31I	GGTCTC	3 cut(s)	551, 718, 1601
Eco47I	GGWCC	3 cut(s)	210, 283, 1016
Eco53kI	GAGCTC	1 cut(s)	1624
Eco88I	CYCGRG	2 cut(s)	263, 852
EcoICRI	GAGCTC	1 cut(s)	1624
EcoNI	CCTNNNNNAGG	1 cut(s)	666
EcoRI	GAATTC	1 cut(s)	70
EcoRII	CCWGG	4 cut(s)	22, 869, 1441, 1666
EcoT14I	CCWWGG	1 cut(s)	1019
EcoT22I	ATGCAT	1 cut(s)	1077
EcoT38I	GRGCYC	2 cut(s)	264, 1626
ErhI	CCWWGG	1 cut(s)	1019
Esp3I	CGTCTC	1 cut(s)	147
FaeI	CATG	6 cut(s)	335, 679, 686, 922, 1075, 1234
FalI	AAGNNNNNCTT	2 cut(s)	1112, 1144
FaqI	GGGAC	3 cut(s)	71, 152, 218
FatI	CATG	6 cut(s)	331, 675, 682, 918, 1071, 1230
FauI	CCCGC	1 cut(s)	96
FbaI	TGATCA	1 cut(s)	499
FblI	GTMKAC	2 cut(s)	612, 1552
Fnu4HI	GCNGC	8 cut(s)	98, 279, 430, 537, 720, 945, 1179, 1533
FokI	GGATG	2 cut(s)	1103, 1636
FriOI	GRGCYC	2 cut(s)	264, 1626
Fsp4HI	GCNGC	8 cut(s)	98, 279, 430, 537, 720, 945, 1179, 1533
FspBI	CTAG	1 cut(s)	699
GluI	GCNGC	8 cut(s)	98, 279, 430, 537, 720, 945, 1179, 1533
GsuI	CTGGAG	4 cut(s)	77, 687, 1197, 1559
HaeIII	GGCC	6 cut(s)	128, 199, 233, 1050, 1159, 1259
HapII	CCGG	6 cut(s)	213, 230, 255, 286, 323, 465
Hin1I	GRCGYC	1 cut(s)	62
Hin1II	CATG	6 cut(s)	335, 679, 686, 922, 1075, 1234
HincII	GTYRAC	1 cut(s)	993
HindII	GTYRAC	1 cut(s)	993
HinfI	GANTC	7 cut(s)	251, 551, 656, 679, 739, 1455, 1493
HpaII	CCGG	6 cut(s)	213, 230, 255, 286, 323, 465
HphI	GGTGA	3 cut(s)	766, 1252, 1433
Hpy166II	GTNNAC	7 cut(s)	7, 524, 591, 613, 757, 993, 1553
Hpy188III	TCNNGA	8 cut(s)	146, 323, 548, 631, 666, 854, 1214, 1576
Hpy8I	GTNNAC	7 cut(s)	7, 524, 591, 613, 757, 993, 1553
Hpy99I	CGWCG	4 cut(s)	64, 67, 70, 152
HpyAV	CCTTC	4 cut(s)	340, 672, 703, 793
HpyCH4III	ACNGT	1 cut(s)	1546
HpyCH4IV	ACGT	2 cut(s)	62, 989
HpyCH4V	TGCA	8 cut(s)	405, 599, 959, 1075, 1234, 1253, 1290, 1649
HpyF10VI	GCNNNNNNNGC	7 cut(s)	97, 230, 275, 536, 605, 1072, 1184
HpyF3I	CTNAG	5 cut(s)	18, 948, 1261, 1526, 1625
HpySE526I	ACGT	2 cut(s)	62, 989
Hsp92I	GRCGYC	1 cut(s)	62
Hsp92II	CATG	6 cut(s)	335, 679, 686, 922, 1075, 1234
Kpn2I	TCCGGA	1 cut(s)	322
Ksp22I	TGATCA	1 cut(s)	499
Kzo9I	GATC	9 cut(s)	103, 142, 319, 327, 499, 637, 1333, 1509, 1539
LmnI	GCTCC	5 cut(s)	96, 221, 467, 633, 899
Lsp1109I	GCAGC	6 cut(s)	84, 441, 706, 956, 1165, 1519
LweI	GCATC	3 cut(s)	364, 1084, 1658
MaeI	CTAG	1 cut(s)	699
MaeII	ACGT	2 cut(s)	62, 989
MaeIII	GTNAC	4 cut(s)	914, 985, 1097, 1297
MalI	GATC	9 cut(s)	105, 144, 321, 329, 501, 639, 1335, 1511, 1541
MbiI	CCGCTC	4 cut(s)	91, 278, 307, 1343
MboI	GATC	9 cut(s)	103, 142, 319, 327, 499, 637, 1333, 1509, 1539
MboII	GAAGA	8 cut(s)	125, 205, 718, 1001, 1255, 1258, 1293, 1514
MflI	RGATCY	3 cut(s)	319, 327, 1333
MhlI	GDGCHC	5 cut(s)	180, 264, 675, 1310, 1626
MlyI	GAGTC	3 cut(s)	260, 688, 748
MmeI	TCCRAC	1 cut(s)	633
Mph1103I	ATGCAT	1 cut(s)	1077
MroI	TCCGGA	1 cut(s)	322
MseI	TTAA	6 cut(s)	42, 165, 1058, 1196, 1277, 1352
MslI	CAYNNNNRTG	1 cut(s)	1083
MspA1I	CMGCKG	2 cut(s)	97, 933
MspI	CCGG	6 cut(s)	213, 230, 255, 286, 323, 465
MspR9I	CCNGG	7 cut(s)	24, 214, 230, 465, 871, 1443, 1668
Mva1269I	GAATGC	1 cut(s)	1255
MvaI	CCWGG	4 cut(s)	24, 871, 1443, 1668
MvnI	CGCG	2 cut(s)	147, 311
MwoI	GCNNNNNNNGC	7 cut(s)	97, 230, 275, 536, 605, 1072, 1184
NciI	CCSGG	3 cut(s)	214, 230, 465
NdeII	GATC	9 cut(s)	103, 142, 319, 327, 499, 637, 1333, 1509, 1539
NlaIII	CATG	6 cut(s)	335, 679, 686, 922, 1075, 1234
NlaIV	GGNNCC	5 cut(s)	211, 299, 321, 1017, 1309
NmeAIII	GCCGAG	3 cut(s)	154, 225, 695
NmuCI	GTSAC	2 cut(s)	914, 985
NruI	TCGCGA	1 cut(s)	147
NsiI	ATGCAT	1 cut(s)	1077
NspI	RCATGY	2 cut(s)	1075, 1234
NspV	TTCGAA	1 cut(s)	1503
PaeI	GCATGC	1 cut(s)	1075
PaeR7I	CTCGAG	1 cut(s)	263
PceI	AGGCCT	1 cut(s)	1259
PcsI	WCGNNNNNNNCGW	4 cut(s)	65, 108, 188, 722
PctI	GAATGC	1 cut(s)	1255
PfeI	GAWTC	4 cut(s)	551, 656, 1455, 1493
PflFI	GACNNNGTC	1 cut(s)	64
PfoI	TCCNGGA	1 cut(s)	463
PkrI	GCNGC	8 cut(s)	99, 280, 431, 538, 721, 946, 1180, 1534
Ple19I	CGATCG	2 cut(s)	145, 1512
PleI	GAGTC	3 cut(s)	259, 687, 747
PpsI	GAGTC	3 cut(s)	259, 687, 747
PsiI	TTATAA	1 cut(s)	750
Psp124BI	GAGCTC	1 cut(s)	1626
Psp6I	CCWGG	4 cut(s)	22, 869, 1441, 1666
PspGI	CCWGG	4 cut(s)	22, 869, 1441, 1666
PspN4I	GGNNCC	5 cut(s)	211, 299, 321, 1017, 1309
PspPI	GGNCC	6 cut(s)	126, 210, 283, 1016, 1049, 1157
PspXI	VCTCGAGB	1 cut(s)	263
PsuI	RGATCY	3 cut(s)	319, 327, 1333
PsyI	GACNNNGTC	1 cut(s)	64
PvuI	CGATCG	2 cut(s)	145, 1512
PvuII	CAGCTG	1 cut(s)	97
RruI	TCGCGA	1 cut(s)	147
RsaI	GTAC	5 cut(s)	365, 449, 592, 773, 1462
RsaNI	GTAC	5 cut(s)	364, 448, 591, 772, 1461
RseI	CAYNNNNRTG	1 cut(s)	1083
Rsr2I	CGGWCCG	1 cut(s)	283
RsrII	CGGWCCG	1 cut(s)	283
SacI	GAGCTC	1 cut(s)	1626
SaqAI	TTAA	6 cut(s)	42, 165, 1058, 1196, 1277, 1352
SatI	GCNGC	8 cut(s)	98, 279, 430, 537, 720, 945, 1179, 1533
Sau3AI	GATC	9 cut(s)	103, 142, 319, 327, 499, 637, 1333, 1509, 1539
Sau96I	GGNCC	6 cut(s)	126, 210, 283, 1016, 1049, 1157
ScaI	AGTACT	1 cut(s)	449
SchI	GAGTC	3 cut(s)	260, 688, 748
ScrFI	CCNGG	7 cut(s)	24, 214, 230, 465, 871, 1443, 1668
SduI	GDGCHC	5 cut(s)	180, 264, 675, 1310, 1626
SfaNI	GCATC	3 cut(s)	364, 1084, 1658
Sfr274I	CTCGAG	1 cut(s)	263
SfuI	TTCGAA	1 cut(s)	1503
SinI	GGWCC	3 cut(s)	210, 283, 1016
SlaI	CTCGAG	1 cut(s)	263
SmiMI	CAYNNNNRTG	1 cut(s)	1083
SmlI	CTYRAG	1 cut(s)	263
SmoI	CTYRAG	1 cut(s)	263
SphI	GCATGC	1 cut(s)	1075
SseBI	AGGCCT	1 cut(s)	1259
SspMI	CTAG	1 cut(s)	699
SstI	GAGCTC	1 cut(s)	1626
StuI	AGGCCT	1 cut(s)	1259
StyD4I	CCNGG	7 cut(s)	22, 212, 228, 463, 869, 1441, 1666
StyI	CCWWGG	1 cut(s)	1019
TaaI	ACNGT	1 cut(s)	1546
TaiI	ACGT	2 cut(s)	65, 992
TaqI	TCGA	9 cut(s)	68, 102, 182, 264, 549, 725, 1503, 1620, 1638
TaqII	GACCGA	1 cut(s)	533
TatI	WGTACW	2 cut(s)	363, 447
TauI	GCSGC	2 cut(s)	281, 539
TfiI	GAWTC	4 cut(s)	551, 656, 1455, 1493
Tru1I	TTAA	6 cut(s)	42, 165, 1058, 1196, 1277, 1352
Tru9I	TTAA	6 cut(s)	42, 165, 1058, 1196, 1277, 1352
TscAI	CASTG	2 cut(s)	622, 1549
TseFI	GTSAC	2 cut(s)	914, 985
TseI	GCWGC	6 cut(s)	97, 429, 719, 944, 1178, 1532
Tsp45I	GTSAC	2 cut(s)	914, 985
TspDTI	ATGAA	3 cut(s)	348, 834, 1383
TspGWI	ACGGA	3 cut(s)	26, 73, 165
TspRI	CASTG	2 cut(s)	622, 1549
Tth111I	GACNNNGTC	1 cut(s)	64
VpaK11BI	GGWCC	3 cut(s)	210, 283, 1016
XagI	CCTNNNNNAGG	1 cut(s)	666
XapI	RAATTY	4 cut(s)	70, 161, 394, 601
XceI	RCATGY	2 cut(s)	1075, 1234
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1486
XhoI	CTCGAG	1 cut(s)	263
XmiI	GTMKAC	2 cut(s)	612, 1552
XspI	CTAG	1 cut(s)	699
ZraI	GACGTC	1 cut(s)	63
ZrmI	AGTACT	1 cut(s)	449
Zsp2I	ATGCAT	1 cut(s)	1077

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.