pycom15g33050

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr15
Physical Location & Seq
Forward (+)
32379274 .. 32383445
4172 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1410 bp
ATGTTTGGCGATGGAAGCAAAGCTGCTGCTATCGAATCCGCCATTGTTTTCCCCAACCCTTCTTCCCATTCGCATTTCCATCCCATTCCCCCCTCGTACTCTCCAATCCCACAATCCCATTCCCACCGCACTCTGACTCTACCACCATCCACACCGTCCAAATCCAATTCCATTCCCGCGCCTAACCAAATGGACGACCCAAGTCCCGCCCTTTTCATCACCGGCGGCCTCTTCTTGGAACCCACGATTCCCAATTCCCTGCTCAATTCCGTTGTGTCGTTTAAGAAGAACTCTCCGTCTTCGGCTGTCGTTTCCGGGGCGGGTTCGTCGTACTGGTGTAGGCTGAGGGCGGTGGCCGGCGGTGGGTTCTTGTCCGTGAGCTTGAATGGCGATGGTGTTGTTCGGGAGTCTAAAGGGTGTTTGGTGCAGAACGGAGATGAAAGTTCGGAGGAGACAGCGCCGGCGGTGGTTACAGAGAGGAAGAGAGAGAAAGTTGGGGTTAGGAGTCGTAGGGCCATGAATACCACCAACCATTTGTGGGCTGGTGCTATAGCGGCCATGGTTTCCAGAACTTTTGTTGCACCTCTTGAGAGACTAAAGCTGGAGTATATAGTGCGCGGCGAACAGAGGCATCTATTTGAGCTCGTTAAGACAATTGCGGCTAATCAGGGGTTGAGGGGCTTTTGGAAGGGGAACCTAGTCAATATTCTTCGTACAGCTCCATTTAAAGCAATCAATTTCTATGCTTATGATACTTACAGAAAACAATTGCTCCGCTTCTCCGGAAATAAGGAGACCACAAATTTTGAGAGGTTCGTTGCTGGCGCTGCAGCTGGAATTACTGCTGCCACACTCTGCTTACCTCTTGACACAATTCGGACTCAGTTGGTGGCTCCTGGTGGGGAAGCCTTGGGTGGTGTGATTGGTGCTTTTCGCCACATGATCCAAACTGAAGGGTTCTTTTCGCTTTATAAGGGCTTAGTACCCTCCATTGCAAGCATGGCACCTGCAGGTGCAGTTTTCTATGGTGTCTATGATATATTAAAATCAACATACCTGCACTCCCATGATGGAAGGAAAAGAATTCACAAGATGAGCCAACAGGGGCGGGGTCGGAGTGCTTTGGACCAACTGGAGTTGGGACCGGTTCGGACTTTACTATATGGAGCTATTTCTGGTGCTTGTGCAGAAGCCGCCACATATCCATTTGAAGTGGTGAGGAGACAGCTACAACTACAAGTCCAGGCAACTAAAATGAATGCCTTGGCAACTGGTATTAAAATAGTTGAACACGGAGGTGTCCCAGCTCTCTATGCAGGACTTATCCCCAGCTTGTTGCAGGTACTTCCTTCGGCCGCAATAAGTTACTTTGTGTATGAGTTTATGAAGATTGTTCTCAAGGTAGAATGA

Protein Analysis

470

Amino Acids

50.6

Weight (kDa)

9.68

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 173 - 258 4.5e-20 Mitochondrial carrier protein
Mito_carr PF00153 266 - 354 4.8e-20 Mitochondrial carrier protein
Mito_carr PF00153 380 - 466 4.3e-19 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0012801)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 972
AarI CACCTGC 2 cut(s) 1001, 1015
Acc36I ACCTGC 4 cut(s) 1001, 1015, 1065, 1330
AccB1I GGYRCC 1 cut(s) 1003
AccII CGCG 2 cut(s) 179, 618
AccIII TCCGGA 1 cut(s) 782
AclWI GGATC 1 cut(s) 937
AcoI YGGCCR 3 cut(s) 354, 555, 1353
AcsI RAATTY 2 cut(s) 802, 1083
AcuI CTGAAG 1 cut(s) 972
AfaI GTAC 5 cut(s) 98, 332, 715, 984, 1344
AfiI CCNNNNNNNGG 3 cut(s) 235, 363, 538
AgeI ACCGGT 1 cut(s) 1144
AgsI TTSAA 3 cut(s) 385, 1211, 1289
AjnI CCWGG 2 cut(s) 895, 1242
AleI CACNNNNGTG 1 cut(s) 1296
Alw21I GWGCWC 1 cut(s) 645
Alw26I GTCTC 4 cut(s) 446, 586, 788, 1216
AlwI GGATC 1 cut(s) 937
Aor13HI TCCGGA 1 cut(s) 782
AoxI GGCC 5 cut(s) 226, 354, 513, 555, 1353
ApeKI GCWGC 5 cut(s) 23, 26, 827, 830, 845
ApoI RAATTY 2 cut(s) 802, 1083
AsiGI ACCGGT 1 cut(s) 1144
AspLEI GCGC 4 cut(s) 181, 460, 618, 827
AspS9I GGNCC 3 cut(s) 513, 1126, 1142
AsuC2I CCSGG 1 cut(s) 316
AsuHPI GGTGA 2 cut(s) 211, 1228
AvaII GGWCC 2 cut(s) 1126, 1142
BanI GGYRCC 1 cut(s) 1003
BanII GRGCYC 1 cut(s) 645
BbsI GAAGAC 1 cut(s) 291
Bbv12I GWGCWC 1 cut(s) 645
BbvCI CCTCAGC 1 cut(s) 344
BbvI GCAGC 5 cut(s) 10, 13, 814, 832, 842
BccI CCATC 5 cut(s) 5, 87, 154, 386, 1064
BciT130I CCWGG 2 cut(s) 897, 1244
BcnI CCSGG 1 cut(s) 316
BcoDI GTCTC 4 cut(s) 446, 586, 788, 1216
BfaI CTAG 1 cut(s) 698
BfmI CTRYAG 3 cut(s) 549, 828, 1008
BfoI RGCGCY 2 cut(s) 461, 828
BfuAI ACCTGC 4 cut(s) 1001, 1015, 1065, 1330
Bme1390I CCNGG 3 cut(s) 316, 897, 1244
Bme18I GGWCC 2 cut(s) 1126, 1142
BmgT120I GGNCC 3 cut(s) 513, 1126, 1142
BmiI GGNNCC 5 cut(s) 240, 695, 894, 1005, 1143
BmrFI CCNGG 3 cut(s) 316, 897, 1244
BmsI GCATC 1 cut(s) 640
BoxI GACNNNNGTC 1 cut(s) 201
BpiI GAAGAC 1 cut(s) 291
BpmI CTGGAG 2 cut(s) 623, 1154
Bpu10I CCTNAGC 1 cut(s) 344
BpuEI CTTGAG 2 cut(s) 608, 1382
BpuMI CCSGG 1 cut(s) 316
BsaI GGTCTC 1 cut(s) 788
BsaJI CCNNGG 4 cut(s) 315, 558, 909, 1263
BsaWI WCCGGW 2 cut(s) 782, 1144
BsaXI ACNNNNNCTCC 4 cut(s) 756, 786, 1046, 1076
Bsc4I CCNNNNNNNGG 3 cut(s) 235, 363, 538
Bse118I RCCGGY 4 cut(s) 221, 356, 460, 1144
Bse1I ACTGG 3 cut(s) 338, 1137, 1276
Bse3DI GCAATG 1 cut(s) 990
BseAI TCCGGA 1 cut(s) 782
BseBI CCWGG 2 cut(s) 897, 1244
BseDI CCNNGG 4 cut(s) 315, 558, 909, 1263
BseGI GGATG 2 cut(s) 79, 146
BseLI CCNNNNNNNGG 3 cut(s) 235, 363, 538
BseMI GCAATG 1 cut(s) 990
BseMII CTCAG 2 cut(s) 335, 896
BseNI ACTGG 3 cut(s) 338, 1137, 1276
BseRI GAGGAG 2 cut(s) 464, 1234
BseX3I CGGCCG 1 cut(s) 1353
BseXI GCAGC 5 cut(s) 10, 13, 814, 832, 842
BseYI CCCAGC 2 cut(s) 1303, 1328
BsgI GTGCAG 4 cut(s) 446, 1035, 1043, 1206
Bsh1236I CGCG 2 cut(s) 179, 618
Bsh1285I CGRYCG 1 cut(s) 1356
BshFI GGCC 5 cut(s) 228, 356, 515, 557, 1355
BshNI GGYRCC 1 cut(s) 1003
BshTI ACCGGT 1 cut(s) 1144
BsiEI CGRYCG 1 cut(s) 1356
BsiHKAI GWGCWC 1 cut(s) 645
BsiSI CCGG 6 cut(s) 222, 315, 357, 461, 783, 1145
BslFI GGGAC 3 cut(s) 189, 1155, 1286
BslI CCNNNNNNNGG 3 cut(s) 235, 363, 538
BsmAI GTCTC 4 cut(s) 446, 586, 788, 1216
BsmFI GGGAC 3 cut(s) 189, 1155, 1286
BsmI GAATGC 1 cut(s) 1264
BsnI GGCC 5 cut(s) 228, 356, 515, 557, 1355
Bso31I GGTCTC 1 cut(s) 788
Bsp1286I GDGCHC 1 cut(s) 645
Bsp13I TCCGGA 1 cut(s) 782
Bsp143I GATC 1 cut(s) 942
Bsp19I CCATGG 1 cut(s) 558
BspANI GGCC 5 cut(s) 228, 356, 515, 557, 1355
BspCNI CTCAG 2 cut(s) 336, 895
BspEI TCCGGA 1 cut(s) 782
BspFNI CGCG 2 cut(s) 179, 618
BspLI GGNNCC 5 cut(s) 240, 695, 894, 1005, 1143
BspMAI CTGCAG 2 cut(s) 832, 1012
BspMI ACCTGC 4 cut(s) 1001, 1015, 1065, 1330
BspPI GGATC 1 cut(s) 937
BspT107I GGYRCC 1 cut(s) 1003
BspTNI GGTCTC 1 cut(s) 788
BsrDI GCAATG 1 cut(s) 990
BsrFI RCCGGY 4 cut(s) 221, 356, 460, 1144
BsrI ACTGG 3 cut(s) 338, 1137, 1276
BssAI RCCGGY 4 cut(s) 221, 356, 460, 1144
BssECI CCNNGG 4 cut(s) 315, 558, 909, 1263
BssMI GATC 1 cut(s) 942
BssT1I CCWWGG 3 cut(s) 558, 909, 1263
Bst2UI CCWGG 2 cut(s) 897, 1244
Bst4CI ACNGT 1 cut(s) 156
Bst6I CTCTTC 2 cut(s) 236, 476
BstC8I GCNNGC 4 cut(s) 358, 462, 823, 997
BstDEI CTNAG 3 cut(s) 344, 882, 979
BstDSI CCRYGG 1 cut(s) 558
BstF5I GGATG 2 cut(s) 79, 146
BstFNI CGCG 2 cut(s) 179, 618
BstH2I RGCGCY 2 cut(s) 461, 828
BstHHI GCGC 4 cut(s) 181, 460, 618, 827
BstKTI GATC 1 cut(s) 945
BstMAI GTCTC 4 cut(s) 446, 586, 788, 1216
BstMBI GATC 1 cut(s) 942
BstMCI CGRYCG 1 cut(s) 1356
BstMWI GCNNNNNNNGC 7 cut(s) 15, 387, 554, 827, 1001, 1193, 1313
BstNI CCWGG 2 cut(s) 897, 1244
BstPAI GACNNNNGTC 1 cut(s) 201
BstSCI CCNGG 3 cut(s) 314, 895, 1242
BstSFI CTRYAG 3 cut(s) 549, 828, 1008
BstUI CGCG 2 cut(s) 179, 618
BstV1I GCAGC 5 cut(s) 10, 13, 814, 832, 842
BstV2I GAAGAC 1 cut(s) 291
BstZI CGGCCG 1 cut(s) 1353
BsuRI GGCC 5 cut(s) 228, 356, 515, 557, 1355
BtgI CCRYGG 1 cut(s) 558
BtgZI GCGATG 2 cut(s) 24, 405
BtsCI GGATG 2 cut(s) 79, 146
BveI ACCTGC 4 cut(s) 1001, 1015, 1065, 1330
Cac8I GCNNGC 4 cut(s) 358, 462, 823, 997
CfoI GCGC 4 cut(s) 181, 460, 618, 827
Cfr10I RCCGGY 4 cut(s) 221, 356, 460, 1144
Cfr13I GGNCC 3 cut(s) 513, 1126, 1142
Csp6I GTAC 5 cut(s) 97, 331, 714, 983, 1343
CspAI ACCGGT 1 cut(s) 1144
CspCI CAANNNNNGTGG 2 cut(s) 787, 822
CviAII CATG 5 cut(s) 517, 559, 940, 1000, 1067
CviQI GTAC 5 cut(s) 97, 331, 714, 983, 1343
DdeI CTNAG 3 cut(s) 344, 882, 979
DpnI GATC 1 cut(s) 944
DpnII GATC 1 cut(s) 942
DraI TTTAAA 1 cut(s) 727
EaeI YGGCCR 3 cut(s) 354, 555, 1353
EagI CGGCCG 1 cut(s) 1353
Eam1104I CTCTTC 2 cut(s) 236, 476
EarI CTCTTC 2 cut(s) 236, 476
EciI GGCGGA 1 cut(s) 28
Ecl136II GAGCTC 1 cut(s) 643
EclXI CGGCCG 1 cut(s) 1353
Eco130I CCWWGG 3 cut(s) 558, 909, 1263
Eco24I GRGCYC 1 cut(s) 645
Eco31I GGTCTC 1 cut(s) 788
Eco47I GGWCC 2 cut(s) 1126, 1142
Eco52I CGGCCG 1 cut(s) 1353
Eco53kI GAGCTC 1 cut(s) 643
Eco57I CTGAAG 1 cut(s) 972
EcoICRI GAGCTC 1 cut(s) 643
EcoRI GAATTC 1 cut(s) 1083
EcoRII CCWGG 2 cut(s) 895, 1242
EcoT14I CCWWGG 3 cut(s) 558, 909, 1263
EcoT38I GRGCYC 1 cut(s) 645
ErhI CCWWGG 3 cut(s) 558, 909, 1263
FaeI CATG 5 cut(s) 520, 562, 943, 1003, 1070
FaqI GGGAC 3 cut(s) 189, 1155, 1286
FatI CATG 5 cut(s) 516, 558, 939, 999, 1066
FauI CCCGC 4 cut(s) 184, 214, 313, 1101
FokI GGATG 2 cut(s) 66, 133
FriOI GRGCYC 1 cut(s) 645
FspBI CTAG 1 cut(s) 698
GlaI GCGC 4 cut(s) 180, 459, 617, 826
GsaI CCCAGC 2 cut(s) 1307, 1332
GsuI CTGGAG 2 cut(s) 623, 1154
HaeII RGCGCY 2 cut(s) 461, 828
HaeIII GGCC 5 cut(s) 228, 356, 515, 557, 1355
HapII CCGG 6 cut(s) 222, 315, 357, 461, 783, 1145
HhaI GCGC 4 cut(s) 181, 460, 618, 827
Hin1II CATG 5 cut(s) 520, 562, 943, 1003, 1070
Hin6I GCGC 4 cut(s) 179, 458, 616, 825
HinP1I GCGC 4 cut(s) 179, 458, 616, 825
HinfI GANTC 6 cut(s) 35, 136, 247, 407, 505, 880
HpaII CCGG 6 cut(s) 222, 315, 357, 461, 783, 1145
HphI GGTGA 2 cut(s) 211, 1228
Hpy188I TCNGA 5 cut(s) 135, 448, 879, 1116, 1152
Hpy188III TCNNGA 5 cut(s) 404, 567, 587, 783, 866
Hpy99I CGWCG 1 cut(s) 331
HpyAV CCTTC 5 cut(s) 69, 682, 947, 1068, 1359
HpyCH4III ACNGT 1 cut(s) 156
HpyF10VI GCNNNNNNNGC 7 cut(s) 15, 387, 554, 827, 1001, 1193, 1313
HpyF3I CTNAG 3 cut(s) 344, 882, 979
Hsp92II CATG 5 cut(s) 520, 562, 943, 1003, 1070
HspAI GCGC 4 cut(s) 179, 458, 616, 825
Kpn2I TCCGGA 1 cut(s) 782
KroI GCCGGC 2 cut(s) 356, 460
KroNI GCCGGC 2 cut(s) 358, 462
Kzo9I GATC 1 cut(s) 942
LmnI GCTCC 4 cut(s) 724, 777, 898, 1166
Lsp1109I GCAGC 5 cut(s) 10, 13, 814, 832, 842
LweI GCATC 1 cut(s) 640
MaeI CTAG 1 cut(s) 698
MaeIII GTNAC 2 cut(s) 469, 1364
MalI GATC 1 cut(s) 944
MboI GATC 1 cut(s) 942
MboII GAAGA 7 cut(s) 54, 223, 291, 298, 493, 701, 1399
MfeI CAATTG 2 cut(s) 654, 767
MhlI GDGCHC 1 cut(s) 645
MlyI GAGTC 4 cut(s) 130, 416, 514, 874
MmeI TCCRAC 1 cut(s) 1094
MreI CGCCGGCG 1 cut(s) 460
MroI TCCGGA 1 cut(s) 782
MroNI GCCGGC 2 cut(s) 356, 460
MseI TTAA 5 cut(s) 282, 648, 726, 1043, 1278
MslI CAYNNNNRTG 2 cut(s) 1065, 1296
MspA1I CMGCKG 1 cut(s) 833
MspI CCGG 6 cut(s) 222, 315, 357, 461, 783, 1145
MspR9I CCNGG 3 cut(s) 316, 897, 1244
MunI CAATTG 2 cut(s) 654, 767
Mva1269I GAATGC 1 cut(s) 1264
MvaI CCWGG 2 cut(s) 897, 1244
MvnI CGCG 2 cut(s) 179, 618
MwoI GCNNNNNNNGC 7 cut(s) 15, 387, 554, 827, 1001, 1193, 1313
NaeI GCCGGC 2 cut(s) 358, 462
NciI CCSGG 1 cut(s) 316
NcoI CCATGG 1 cut(s) 558
NdeII GATC 1 cut(s) 942
NgoMIV GCCGGC 2 cut(s) 356, 460
NlaIII CATG 5 cut(s) 520, 562, 943, 1003, 1070
NlaIV GGNNCC 5 cut(s) 240, 695, 894, 1005, 1143
OliI CACNNNNGTG 1 cut(s) 1296
PaqCI CACCTGC 2 cut(s) 1001, 1015
PctI GAATGC 1 cut(s) 1264
PdiI GCCGGC 2 cut(s) 358, 462
PfeI GAWTC 2 cut(s) 35, 247
PinAI ACCGGT 1 cut(s) 1144
PleI GAGTC 4 cut(s) 130, 415, 513, 874
PpsI GAGTC 4 cut(s) 130, 415, 513, 874
PshAI GACNNNNGTC 1 cut(s) 201
PsiI TTATAA 1 cut(s) 972
Psp124BI GAGCTC 1 cut(s) 645
Psp6I CCWGG 2 cut(s) 895, 1242
PspFI CCCAGC 2 cut(s) 1303, 1328
PspGI CCWGG 2 cut(s) 895, 1242
PspN4I GGNNCC 5 cut(s) 240, 695, 894, 1005, 1143
PspPI GGNCC 3 cut(s) 513, 1126, 1142
PstI CTGCAG 2 cut(s) 832, 1012
PvuII CAGCTG 1 cut(s) 833
RsaI GTAC 5 cut(s) 98, 332, 715, 984, 1344
RsaNI GTAC 5 cut(s) 97, 331, 714, 983, 1343
RseI CAYNNNNRTG 2 cut(s) 1065, 1296
SacI GAGCTC 1 cut(s) 645
SaqAI TTAA 5 cut(s) 282, 648, 726, 1043, 1278
Sau3AI GATC 1 cut(s) 942
Sau96I GGNCC 3 cut(s) 513, 1126, 1142
SbfI CCTGCAGG 1 cut(s) 1012
SchI GAGTC 4 cut(s) 130, 416, 514, 874
ScrFI CCNGG 3 cut(s) 316, 897, 1244
SdaI CCTGCAGG 1 cut(s) 1012
SduI GDGCHC 1 cut(s) 645
SfaNI GCATC 1 cut(s) 640
SfcI CTRYAG 3 cut(s) 549, 828, 1008
SgrAI CRCCGGYG 2 cut(s) 221, 460
SinI GGWCC 2 cut(s) 1126, 1142
SmiMI CAYNNNNRTG 2 cut(s) 1065, 1296
SmlI CTYRAG 2 cut(s) 587, 1397
SmoI CTYRAG 2 cut(s) 587, 1397
Sse8387I CCTGCAGG 1 cut(s) 1012
SspI AATATT 1 cut(s) 706
SspMI CTAG 1 cut(s) 698
SstI GAGCTC 1 cut(s) 645
StyD4I CCNGG 3 cut(s) 314, 895, 1242
StyI CCWWGG 3 cut(s) 558, 909, 1263
TaaI ACNGT 1 cut(s) 156
TaqI TCGA 1 cut(s) 33
TauI GCSGC 6 cut(s) 228, 557, 621, 662, 1196, 1358
TfiI GAWTC 2 cut(s) 35, 247
Tru1I TTAA 5 cut(s) 282, 648, 726, 1043, 1278
Tru9I TTAA 5 cut(s) 282, 648, 726, 1043, 1278
TseI GCWGC 5 cut(s) 23, 26, 827, 830, 845
TspDTI ATGAA 5 cut(s) 205, 453, 533, 1271, 1400
TspGWI ACGGA 5 cut(s) 259, 285, 364, 447, 1308
VpaK11BI GGWCC 2 cut(s) 1126, 1142
XapI RAATTY 2 cut(s) 802, 1083
XcmI CCANNNNNNNNNTGG 2 cut(s) 539, 997
XspI CTAG 1 cut(s) 698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.