Rh7DG464000

Belongs to the mitochondrial carrier (TC 2.A.29) family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
Physical Location & Seq
Reverse (-)
66098269 .. 66103148
4880 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG464000.1

Sequence Viewer

Length: 1254 bp
ATGCCCCCCTCGGAGCTCTCTTGCTCTGCAAACCCCAACCTCCACGACTCAAACTCCGGCCTATTCGTCACCGGCGGTTTGTTCCTGGAGCCCACAGTCCCCAATTCGCTGCTTAATTCCGTCTCGTTCAGAAAGACCTCAAACGCCGTCGTTGCCGGGTCGGGTTATTCGTGCCGGTTGCGACTGGCGGGTGGCGGTGGCGGAGGGTTTTTGTCGGTGAGTTTGAGAAGCGATGGGGTTGTTCGGGAGTCGAAAGGGGGGTGTTTGGTGCAGAACGGCGAGGAGGGCTCGGAGGAAGCAGCGGTGGTGGTGGTTCAAGAAGAGAAGAGAGAGAAAGTTGGGATTAGGAGAGGAAGGGCCATGAACACCACCAAGCATTTGTGGGCTGGTGCCATAGCCGCCATGGTTTCCAGAACGTTTGTTGCGCCGCTTGAGAGACTAAAGCTGGAGTATATAGTTCGTGGAGAACGGAGGCATTTGTTTGAGCTTGTCAAGAGCATAGCGGTTTCTCAGGGCGTGAGGGGGTTTTGGAAGGGGAACTTAGTCAATATTCTTCGCACAGCTCCATTTAAAGCAATCAATTTTTATGCATATGATACTTACAGAAAACAATTGCTTAGATTTTCTGGAAATAAGGAGACTACAAATTTTGAGAGATTCGTTGCTGGTGCTGCAGCTGGAATTACTGCTACCATACTCTGCTTACCTCTTGACACGATTCGAACTAAGCTAGTGGCTCCGGGTGGGGAATCCTTGGGCGGTGTCATTGGTGCTTTCCGCCACATGATCCAGACTGAAGGGTTCTTTTCCCTTTATAAGGGCCTAGTACCATCCATAGCAAGCATGGCACCTTCAGGTGCAGTTTTCTATGGTGTCTATGACATATTAAAATCAGCTTACTTGCATTCACCGAATGGAAGGAAAAGAATTCAGAAAATGAACCAGCACGGTGAGCGCCTGAATGCTTTTGATCAACTGGAGTTGGGACCGGTTAGGACATTACTCTATGGAGCTATTGCTGGTGCCTGTGCAGAAGCTGCCACTTATCCATTTGAAGTTGTGAGGAGACAGCTTCAATTGCAATCCCAGGCTACTAAAATGAGCACCTTGGCGACTTGTATTAAGATAGTTGAACGAGGAGGGGTCCCGGCACTCTATGCAGGACTTGTTCCCAGCTTGTTACAGGTACTTCCTTCGGCTGCAATAAGTTACTTTGTCTATGAGTTCATGAAAATTGTTCTCAAGGTAGAATGA

Protein Analysis

417

Amino Acids

45.12

Weight (kDa)

9.67

Isoelectric Point (pI)

47.2

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mito_carr PF00153 121 - 206 1.4e-19 Mitochondrial carrier protein
Mito_carr PF00153 214 - 301 8.7e-20 Mitochondrial carrier protein
Mito_carr PF00153 328 - 414 2.6e-20 Mitochondrial carrier protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0012801)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 816
AccB1I GGYRCC 3 cut(s) 389, 847, 1022
AclI AACGTT 1 cut(s) 416
AclWI GGATC 1 cut(s) 781
AcsI RAATTY 2 cut(s) 646, 927
AcuI CTGAAG 2 cut(s) 816, 837
AfaI GTAC 2 cut(s) 828, 1188
AfiI CCNNNNNNNGG 1 cut(s) 817
AgeI ACCGGT 1 cut(s) 988
AgsI TTSAA 4 cut(s) 317, 1055, 1076, 1133
AjnI CCWGG 2 cut(s) 84, 1086
Alw21I GWGCWC 2 cut(s) 18, 1106
Alw26I GTCTC 4 cut(s) 127, 430, 632, 1060
AlwI GGATC 1 cut(s) 781
AlwNI CAGNNNCTG 1 cut(s) 1037
AoxI GGCC 3 cut(s) 58, 357, 820
ApeKI GCWGC 6 cut(s) 109, 299, 671, 674, 1037, 1199
ApoI RAATTY 2 cut(s) 646, 927
AsiGI ACCGGT 1 cut(s) 988
AspLEI GCGC 2 cut(s) 427, 957
AspS9I GGNCC 4 cut(s) 357, 820, 986, 1144
AsuC2I CCSGG 3 cut(s) 157, 741, 1148
AsuHPI GGTGA 4 cut(s) 61, 229, 900, 962
AsuII TTCGAA 1 cut(s) 721
AvaII GGWCC 2 cut(s) 986, 1144
BanI GGYRCC 3 cut(s) 389, 847, 1022
BanII GRGCYC 3 cut(s) 18, 93, 290
Bbv12I GWGCWC 2 cut(s) 18, 1106
BbvI GCAGC 6 cut(s) 96, 311, 658, 686, 1024, 1186
BccI CCATC 2 cut(s) 227, 838
BceAI ACGGC 2 cut(s) 131, 292
BciT130I CCWGG 2 cut(s) 86, 1088
BclI TGATCA 1 cut(s) 970
BcnI CCSGG 3 cut(s) 157, 741, 1148
BcoDI GTCTC 4 cut(s) 127, 430, 632, 1060
BfaI CTAG 2 cut(s) 731, 824
BfmI CTRYAG 1 cut(s) 672
BfoI RGCGCY 1 cut(s) 958
BisI GCNGC 8 cut(s) 110, 300, 399, 428, 672, 675, 1038, 1200
BlsI GCNGC 8 cut(s) 111, 301, 400, 429, 673, 676, 1039, 1201
Bme1390I CCNGG 5 cut(s) 86, 157, 741, 1088, 1148
Bme18I GGWCC 2 cut(s) 986, 1144
BmgT120I GGNCC 4 cut(s) 357, 820, 986, 1144
BmiI GGNNCC 8 cut(s) 90, 391, 738, 849, 987, 1024, 1145, 1146
BmrFI CCNGG 5 cut(s) 86, 157, 741, 1088, 1148
BplI GAGNNNNNCTC 2 cut(s) 272, 304
BpmI CTGGAG 3 cut(s) 107, 467, 998
Bpu14I TTCGAA 1 cut(s) 721
BpuEI CTTGAG 2 cut(s) 452, 1226
BpuMI CCSGG 3 cut(s) 157, 741, 1148
BsaJI CCNNGG 5 cut(s) 9, 402, 753, 1086, 1107
BsaWI WCCGGW 1 cut(s) 988
BsaXI ACNNNNNCTCC 2 cut(s) 38, 68
Bsc4I CCNNNNNNNGG 1 cut(s) 817
Bse118I RCCGGY 3 cut(s) 71, 174, 988
Bse1I ACTGG 2 cut(s) 189, 981
BseBI CCWGG 2 cut(s) 86, 1088
BseDI CCNNGG 5 cut(s) 9, 402, 753, 1086, 1107
BseGI GGATG 1 cut(s) 830
BseLI CCNNNNNNNGG 1 cut(s) 817
BseMII CTCAG 1 cut(s) 524
BseNI ACTGG 2 cut(s) 189, 981
BseRI GAGGAG 3 cut(s) 296, 1078, 1152
BseXI GCAGC 6 cut(s) 96, 311, 658, 686, 1024, 1186
BseYI CCCAGC 1 cut(s) 1172
BsgI GTGCAG 3 cut(s) 290, 879, 1050
BshFI GGCC 3 cut(s) 60, 359, 822
BshNI GGYRCC 3 cut(s) 389, 847, 1022
BshTI ACCGGT 1 cut(s) 988
BsiHKAI GWGCWC 2 cut(s) 18, 1106
BsiSI CCGG 7 cut(s) 57, 72, 156, 175, 740, 989, 1148
BslFI GGGAC 3 cut(s) 83, 999, 1130
BslI CCNNNNNNNGG 1 cut(s) 817
BsmAI GTCTC 4 cut(s) 127, 430, 632, 1060
BsmBI CGTCTC 1 cut(s) 127
BsmFI GGGAC 3 cut(s) 83, 999, 1130
BsmI GAATGC 2 cut(s) 904, 967
BsnI GGCC 3 cut(s) 60, 359, 822
Bsp119I TTCGAA 1 cut(s) 721
Bsp1286I GDGCHC 4 cut(s) 18, 93, 290, 1106
Bsp143I GATC 2 cut(s) 786, 970
Bsp19I CCATGG 1 cut(s) 402
BspANI GGCC 3 cut(s) 60, 359, 822
BspCNI CTCAG 1 cut(s) 523
BspHI TCATGA 1 cut(s) 1227
BspLI GGNNCC 8 cut(s) 90, 391, 738, 849, 987, 1024, 1145, 1146
BspMAI CTGCAG 1 cut(s) 676
BspPI GGATC 1 cut(s) 781
BspT104I TTCGAA 1 cut(s) 721
BspT107I GGYRCC 3 cut(s) 389, 847, 1022
BsrFI RCCGGY 3 cut(s) 71, 174, 988
BsrI ACTGG 2 cut(s) 189, 981
BssAI RCCGGY 3 cut(s) 71, 174, 988
BssECI CCNNGG 5 cut(s) 9, 402, 753, 1086, 1107
BssMI GATC 2 cut(s) 786, 970
BssT1I CCWWGG 3 cut(s) 402, 753, 1107
Bst2UI CCWGG 2 cut(s) 86, 1088
Bst4CI ACNGT 2 cut(s) 97, 950
Bst6I CTCTTC 2 cut(s) 315, 320
BstAPI GCANNNNNTGC 2 cut(s) 1037, 1157
BstBI TTCGAA 1 cut(s) 721
BstC8I GCNNGC 1 cut(s) 841
BstDEI CTNAG 4 cut(s) 510, 541, 617, 726
BstDSI CCRYGG 1 cut(s) 402
BstENI CCTNNNNNAGG 1 cut(s) 815
BstF5I GGATG 1 cut(s) 830
BstH2I RGCGCY 1 cut(s) 958
BstHHI GCGC 2 cut(s) 427, 957
BstKTI GATC 2 cut(s) 789, 973
BstMAI GTCTC 4 cut(s) 127, 430, 632, 1060
BstMBI GATC 2 cut(s) 786, 970
BstMWI GCNNNNNNNGC 9 cut(s) 152, 285, 398, 671, 845, 952, 1037, 1078, 1157
BstNI CCWGG 2 cut(s) 86, 1088
BstSCI CCNGG 5 cut(s) 84, 155, 739, 1086, 1146
BstSFI CTRYAG 1 cut(s) 672
BstV1I GCAGC 6 cut(s) 96, 311, 658, 686, 1024, 1186
BsuRI GGCC 3 cut(s) 60, 359, 822
BtgI CCRYGG 1 cut(s) 402
BtgZI GCGATG 1 cut(s) 246
BtsCI GGATG 1 cut(s) 830
Cac8I GCNNGC 1 cut(s) 841
CaiI CAGNNNCTG 1 cut(s) 1037
CciI TCATGA 1 cut(s) 1227
CfoI GCGC 2 cut(s) 427, 957
Cfr10I RCCGGY 3 cut(s) 71, 174, 988
Cfr13I GGNCC 4 cut(s) 357, 820, 986, 1144
Csp6I GTAC 2 cut(s) 827, 1187
CspAI ACCGGT 1 cut(s) 988
CviAII CATG 5 cut(s) 361, 403, 784, 844, 1228
CviQI GTAC 2 cut(s) 827, 1187
DdeI CTNAG 4 cut(s) 510, 541, 617, 726
DpnI GATC 2 cut(s) 788, 972
DpnII GATC 2 cut(s) 786, 970
DraI TTTAAA 1 cut(s) 571
Eam1104I CTCTTC 2 cut(s) 315, 320
EarI CTCTTC 2 cut(s) 315, 320
EciI GGCGGA 2 cut(s) 216, 767
Ecl136II GAGCTC 1 cut(s) 16
Eco130I CCWWGG 3 cut(s) 402, 753, 1107
Eco24I GRGCYC 3 cut(s) 18, 93, 290
Eco47I GGWCC 2 cut(s) 986, 1144
Eco53kI GAGCTC 1 cut(s) 16
Eco57I CTGAAG 2 cut(s) 816, 837
EcoICRI GAGCTC 1 cut(s) 16
EcoNI CCTNNNNNAGG 1 cut(s) 815
EcoO109I RGGNCCY 2 cut(s) 820, 1144
EcoRI GAATTC 1 cut(s) 927
EcoRII CCWGG 2 cut(s) 84, 1086
EcoT14I CCWWGG 3 cut(s) 402, 753, 1107
EcoT22I ATGCAT 1 cut(s) 592
EcoT38I GRGCYC 3 cut(s) 18, 93, 290
ErhI CCWWGG 3 cut(s) 402, 753, 1107
Esp3I CGTCTC 1 cut(s) 127
FaeI CATG 5 cut(s) 364, 406, 787, 847, 1231
FalI AAGNNNNNCTT 2 cut(s) 524, 556
FaqI GGGAC 3 cut(s) 83, 999, 1130
FatI CATG 5 cut(s) 360, 402, 783, 843, 1227
FauI CCCGC 1 cut(s) 181
FauNDI CATATG 1 cut(s) 592
FbaI TGATCA 1 cut(s) 970
Fnu4HI GCNGC 8 cut(s) 110, 300, 399, 428, 672, 675, 1038, 1200
FokI GGATG 1 cut(s) 817
FriOI GRGCYC 3 cut(s) 18, 93, 290
Fsp4HI GCNGC 8 cut(s) 110, 300, 399, 428, 672, 675, 1038, 1200
FspBI CTAG 2 cut(s) 731, 824
GlaI GCGC 2 cut(s) 426, 956
GluI GCNGC 8 cut(s) 110, 300, 399, 428, 672, 675, 1038, 1200
GsaI CCCAGC 1 cut(s) 1176
GsuI CTGGAG 3 cut(s) 107, 467, 998
HaeII RGCGCY 1 cut(s) 958
HaeIII GGCC 3 cut(s) 60, 359, 822
HapII CCGG 7 cut(s) 57, 72, 156, 175, 740, 989, 1148
HhaI GCGC 2 cut(s) 427, 957
Hin1II CATG 5 cut(s) 364, 406, 787, 847, 1231
Hin6I GCGC 2 cut(s) 425, 955
HinP1I GCGC 2 cut(s) 425, 955
HinfI GANTC 5 cut(s) 47, 248, 657, 718, 749
HpaII CCGG 7 cut(s) 57, 72, 156, 175, 740, 989, 1148
HphI GGTGA 4 cut(s) 61, 229, 900, 962
Hpy188I TCNGA 4 cut(s) 13, 131, 292, 933
Hpy188III TCNNGA 8 cut(s) 245, 317, 411, 493, 627, 710, 790, 1228
Hpy99I CGWCG 1 cut(s) 152
HpyAV CCTTC 6 cut(s) 348, 526, 791, 861, 912, 1203
HpyCH4III ACNGT 2 cut(s) 97, 950
HpyCH4IV ACGT 1 cut(s) 416
HpyF10VI GCNNNNNNNGC 9 cut(s) 152, 285, 398, 671, 845, 952, 1037, 1078, 1157
HpyF3I CTNAG 4 cut(s) 510, 541, 617, 726
HpySE526I ACGT 1 cut(s) 416
Hsp92II CATG 5 cut(s) 364, 406, 787, 847, 1231
HspAI GCGC 2 cut(s) 425, 955
KflI GGGWCCC 1 cut(s) 1144
Ksp22I TGATCA 1 cut(s) 970
Kzo9I GATC 2 cut(s) 786, 970
LmnI GCTCC 5 cut(s) 13, 88, 568, 742, 1010
Lsp1109I GCAGC 6 cut(s) 96, 311, 658, 686, 1024, 1186
MaeI CTAG 2 cut(s) 731, 824
MaeII ACGT 1 cut(s) 416
MaeIII GTNAC 3 cut(s) 67, 1179, 1208
MalI GATC 2 cut(s) 788, 972
MboI GATC 2 cut(s) 786, 970
MboII GAAGA 3 cut(s) 332, 337, 545
MfeI CAATTG 2 cut(s) 611, 1076
MhlI GDGCHC 4 cut(s) 18, 93, 290, 1106
MluCI AATT 9 cut(s) 103, 115, 580, 611, 646, 681, 927, 1076, 1233
MlyI GAGTC 2 cut(s) 41, 257
Mph1103I ATGCAT 1 cut(s) 592
MseI TTAA 4 cut(s) 114, 570, 887, 1122
MspA1I CMGCKG 2 cut(s) 302, 677
MspI CCGG 7 cut(s) 57, 72, 156, 175, 740, 989, 1148
MspR9I CCNGG 5 cut(s) 86, 157, 741, 1088, 1148
MunI CAATTG 2 cut(s) 611, 1076
Mva1269I GAATGC 2 cut(s) 904, 967
MvaI CCWGG 2 cut(s) 86, 1088
MwoI GCNNNNNNNGC 9 cut(s) 152, 285, 398, 671, 845, 952, 1037, 1078, 1157
NciI CCSGG 3 cut(s) 157, 741, 1148
NcoI CCATGG 1 cut(s) 402
NdeI CATATG 1 cut(s) 592
NdeII GATC 2 cut(s) 786, 970
NlaIII CATG 5 cut(s) 364, 406, 787, 847, 1231
NlaIV GGNNCC 8 cut(s) 90, 391, 738, 849, 987, 1024, 1145, 1146
NmuCI GTSAC 1 cut(s) 67
NsiI ATGCAT 1 cut(s) 592
NspV TTCGAA 1 cut(s) 721
PagI TCATGA 1 cut(s) 1227
PcsI WCGNNNNNNNCGW 1 cut(s) 167
PctI GAATGC 2 cut(s) 904, 967
PfeI GAWTC 3 cut(s) 657, 718, 749
PfoI TCCNGGA 1 cut(s) 84
PinAI ACCGGT 1 cut(s) 988
PkrI GCNGC 8 cut(s) 111, 301, 400, 429, 673, 676, 1039, 1201
PleI GAGTC 2 cut(s) 41, 256
PpsI GAGTC 2 cut(s) 41, 256
PpuMI RGGWCCY 1 cut(s) 1144
PsiI TTATAA 1 cut(s) 816
Psp124BI GAGCTC 1 cut(s) 18
Psp1406I AACGTT 1 cut(s) 416
Psp5II RGGWCCY 1 cut(s) 1144
Psp6I CCWGG 2 cut(s) 84, 1086
PspFI CCCAGC 1 cut(s) 1172
PspGI CCWGG 2 cut(s) 84, 1086
PspN4I GGNNCC 8 cut(s) 90, 391, 738, 849, 987, 1024, 1145, 1146
PspPI GGNCC 4 cut(s) 357, 820, 986, 1144
PspPPI RGGWCCY 1 cut(s) 1144
PstI CTGCAG 1 cut(s) 676
PstNI CAGNNNCTG 1 cut(s) 1037
PvuII CAGCTG 1 cut(s) 677
RsaI GTAC 2 cut(s) 828, 1188
RsaNI GTAC 2 cut(s) 827, 1187
SacI GAGCTC 1 cut(s) 18
SaqAI TTAA 4 cut(s) 114, 570, 887, 1122
SatI GCNGC 8 cut(s) 110, 300, 399, 428, 672, 675, 1038, 1200
Sau3AI GATC 2 cut(s) 786, 970
Sau96I GGNCC 4 cut(s) 357, 820, 986, 1144
SchI GAGTC 2 cut(s) 41, 257
ScrFI CCNGG 5 cut(s) 86, 157, 741, 1088, 1148
SduI GDGCHC 4 cut(s) 18, 93, 290, 1106
SfcI CTRYAG 1 cut(s) 672
SfuI TTCGAA 1 cut(s) 721
SgrAI CRCCGGYG 1 cut(s) 71
SinI GGWCC 2 cut(s) 986, 1144
SmlI CTYRAG 2 cut(s) 431, 1241
SmoI CTYRAG 2 cut(s) 431, 1241
Sse9I AATT 9 cut(s) 103, 115, 580, 611, 646, 681, 927, 1076, 1233
SspI AATATT 1 cut(s) 550
SspMI CTAG 2 cut(s) 731, 824
SstI GAGCTC 1 cut(s) 18
StyD4I CCNGG 5 cut(s) 84, 155, 739, 1086, 1146
StyI CCWWGG 3 cut(s) 402, 753, 1107
TaaI ACNGT 2 cut(s) 97, 950
TaiI ACGT 1 cut(s) 419
TaqI TCGA 2 cut(s) 251, 721
TasI AATT 9 cut(s) 103, 115, 580, 611, 646, 681, 927, 1076, 1233
TauI GCSGC 2 cut(s) 401, 430
TfiI GAWTC 3 cut(s) 657, 718, 749
Tru1I TTAA 4 cut(s) 114, 570, 887, 1122
Tru9I TTAA 4 cut(s) 114, 570, 887, 1122
TseFI GTSAC 1 cut(s) 67
TseI GCWGC 6 cut(s) 109, 299, 671, 674, 1037, 1199
Tsp45I GTSAC 1 cut(s) 67
TspDTI ATGAA 4 cut(s) 377, 953, 1216, 1244
TspGWI ACGGA 2 cut(s) 109, 484
VpaK11BI GGWCC 2 cut(s) 986, 1144
XagI CCTNNNNNAGG 1 cut(s) 815
XapI RAATTY 2 cut(s) 646, 927
XcmI CCANNNNNNNNNTGG 2 cut(s) 400, 841
XspI CTAG 2 cut(s) 731, 824
Zsp2I ATGCAT 1 cut(s) 592
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.