Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0012801

Physical Location & Seq

Genomic Coordinates Forward (+)

4195836 .. 4199769

Gene Structure 3934 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00221400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1614 bp

ATGCCCCCCTCGGAGCTCTCTTGCTCTGCAAACCCCAACCTCCACGACTCAAACTCCGGCCTATTCGTCCCTGGCGGTTTGTTCCTGGAGCCCACAGTCCCCAATTCGTTGCTCAATTCCGTCTCGTTCAGAAAGACCTCAAACGGCGTCGTTTCCGGGTCGGGTTATGGGTGCCGGTTGCGACTGGCGGGTGGCGGTGGCGGTGGCGGTGGATTTTTGTCGGTGAGTTTGAGCAGCGATGGGGTTGTTCGGGAGTCGAAAGGGGGTGTTTGGTGCAGAACGGCGAGGAGGGCTCGGAGGAAGCAGCGGTGGTGGTGGTTCAAGAAGAGAAGAGAGAAAGTTGGGATTAGGAGAGGAAGGGCCATGAACACCACCAAGCATTTGTGGGCTGGTGCCATAGCCGCCATGGTTTCCAGAACGTTTGTTGCGCCGCTTGAGAGACTAAAGCTGGAGTATATAGTTCGTGGTGAACGGAGGCATTTGTTTGAGCTTGTCAAGAGCATAGCGGTTTCTCAGGGCGTGAGGGGGTTTTGGAAGGGGAACTTAGTCAATATTCTTCGCACAGCTCCATTTAAAGCAATCAATTTTTATGCATATGATACTTACAGAAAACAATTGCTTAGATTTTCTGGAAATAAGGAGACTACAAATTTTGAGAGGTTCGTGGCTGGTGCTGCAGCTGGAATTACTGCTACCATACTCTGCTTACCTCTTGACACGATTCGAACTAAGCTAGTGGCTCCGGGTGGGGAATCCTTGGGCGGTGTCATTGGTGCTTTCCGCCACATGATCCAGACTGAAGGGTTCTTTTCCCTTTATAAGGGCCTAGTACCATCCATAGCAAGCATGGCACCTTCAGGTGCAGTTTTCTATGGTGTCTATGACATATTAAAATCAGCTTACTTGCATTCACCGAATGGAAGGAAAAGAATTCAGAAAATGAACCAGCATGGCCTGCGCCTGAATGCTTTTGACCAACTGGAGTTGGGACCCGTTAGGACATTACTCTATGGAGCTATTGCTGGTGCCTGTGCAGAAGCTGCCACTTATCCATTTGAAGTTTTGAGGAGACAGCTTCAATTGCAATCCCAGGCTACTAAAATGAGCACCTTGGCGACTTGTATTAAGATAGTTGAACGAGGAGGGGGTCCCGGCACTCTATGCAGGACTTGTTCCCAGCTTGTTACAGTAGGGCGTAAACATCACTTTCCCCTTATAGTACTTCCTTCAGCTGCAATAAGTTACTTTGTCTATGAGTTCATGAAAATTGTTCTCAAGGTTTCTGCACATCTTTATCTTCTCTCAGTTGATGCTCTGCGTTTGCAAATCAACCCTTTGTTCACTGCCAATTTTGACTTTATTCTCAAGAAACTTGACATTCAGTCAGGAAATAGCATTGCTTGGTGCTGCTTTAGACATGTTTACTATCACATTCCCACATTGGGAACCAGAGTTCAGCATCTATTCGATAGTCGTAGCATTTTTCCCCTAGTTCTGCAATATTATGACAACATCAATCCTCGTACACTGTGGTTACTGGTTAGCACTGAGGAATTGCAACACTATGGCTTTGACTACCATACAGTGCTACTGCATAGTGCAATTGTTGCGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005215 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006810 GO:0006839 GO:0008150 GO:0009507 GO:0009526 GO:0009536 GO:0009941 GO:0016020 GO:0016021 GO:0019866 GO:0022857 GO:0031090 GO:0031224 GO:0031966 GO:0031967 GO:0031975 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0051179 GO:0051234 GO:0055085

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mito_carr

Protein Analysis

537

Amino Acids

59.63

Weight (kDa)

10.07

Isoelectric Point (pI)

47.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mito_carr	PF00153	122 - 207	2.2e-19	Mitochondrial carrier protein
Mito_carr	PF00153	215 - 302	1.3e-19	Mitochondrial carrier protein
Mito_carr	PF00153	329 - 424	2.3e-08	Mitochondrial carrier protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012801)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G78180
fragaria_vesca	FvH4_5g37340 FvH4_5g37340
malus_domestica	MD08G1182700.v1.1 MD15G1368800.v1.1
prunus_persica	Prupe.1G516900_v2.0.a1
pyrus_communis	pycom08g15650 pycom15g33050
rosa_chinensis	RchiOBHm_Chr7g0238991
rosa_laevigata	RLG00000000792
rosa_multiflora	Rmu_sc0004132.1_g000003
rosa_roxburghii	Rroxscaffold_3G00221400
rosa_rugosa	Rorug07G0324300
rosa_samantha	Rh7AG479300 Rh7BG451900 Rh7CG496500 Rh7DG464000
rosa_wichuraiana	Rw7G040010

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	819
AccB1I	GGYRCC	4 cut(s)	171, 392, 850, 1025
AclI	AACGTT	1 cut(s)	419
AclWI	GGATC	1 cut(s)	784
AcsI	RAATTY	2 cut(s)	649, 930
AcuI	CTGAAG	3 cut(s)	819, 840, 1212
AcyI	GRCGYC	1 cut(s)	147
AfaI	GTAC	3 cut(s)	831, 1221, 1525
AfiI	CCNNNNNNNGG	2 cut(s)	820, 1442
AflIII	ACRYGT	1 cut(s)	1417
AgsI	TTSAA	4 cut(s)	322, 1058, 1079, 1136
AhdI	GACNNNNNGTC	1 cut(s)	1381
AjnI	CCWGG	3 cut(s)	70, 84, 1089
AloI	GAACNNNNNNTCC	2 cut(s)	1437, 1469
Alw21I	GWGCWC	2 cut(s)	18, 1109
Alw26I	GTCTC	4 cut(s)	127, 433, 635, 1063
AlwI	GGATC	1 cut(s)	784
AlwNI	CAGNNNCTG	1 cut(s)	1040
AoxI	GGCC	4 cut(s)	58, 360, 823, 952
ApeKI	GCWGC	7 cut(s)	234, 304, 674, 677, 1040, 1232, 1407
ApoI	RAATTY	2 cut(s)	649, 930
AspLEI	GCGC	2 cut(s)	430, 960
AspS9I	GGNCC	4 cut(s)	360, 823, 989, 1148
AsuC2I	CCSGG	3 cut(s)	157, 744, 1152
AsuHPI	GGTGA	3 cut(s)	235, 479, 903
AsuII	TTCGAA	1 cut(s)	724
AvaII	GGWCC	2 cut(s)	989, 1148
BanI	GGYRCC	4 cut(s)	171, 392, 850, 1025
BanII	GRGCYC	3 cut(s)	18, 93, 295
Bbv12I	GWGCWC	2 cut(s)	18, 1109
BbvI	GCAGC	7 cut(s)	246, 316, 661, 689, 1027, 1219, 1394
BccI	CCATC	2 cut(s)	233, 841
BceAI	ACGGC	2 cut(s)	160, 297
BciT130I	CCWGG	3 cut(s)	72, 86, 1091
BcnI	CCSGG	3 cut(s)	157, 744, 1152
BcoDI	GTCTC	4 cut(s)	127, 433, 635, 1063
BfaI	CTAG	3 cut(s)	734, 827, 1490
BfmI	CTRYAG	1 cut(s)	675
BisI	GCNGC	9 cut(s)	235, 305, 402, 431, 675, 678, 1041, 1233, 1408
BlsI	GCNGC	9 cut(s)	236, 306, 403, 432, 676, 679, 1042, 1234, 1409
BmcAI	AGTACT	1 cut(s)	1221
Bme1390I	CCNGG	6 cut(s)	72, 86, 157, 744, 1091, 1152
Bme18I	GGWCC	2 cut(s)	989, 1148
BmeRI	GACNNNNNGTC	1 cut(s)	1381
BmgT120I	GGNCC	4 cut(s)	360, 823, 989, 1148
BmrFI	CCNGG	6 cut(s)	72, 86, 157, 744, 1091, 1152
BmsI	GCATC	2 cut(s)	1300, 1468
BplI	GAGNNNNNCTC	2 cut(s)	277, 309
BpmI	CTGGAG	3 cut(s)	107, 470, 1001
Bpu14I	TTCGAA	1 cut(s)	724
BpuEI	CTTGAG	3 cut(s)	455, 1259, 1349
BpuMI	CCSGG	3 cut(s)	157, 744, 1152
BsaHI	GRCGYC	1 cut(s)	147
BsaJI	CCNNGG	6 cut(s)	9, 70, 405, 756, 1089, 1110
BsaXI	ACNNNNNCTCC	2 cut(s)	38, 68
Bsc4I	CCNNNNNNNGG	2 cut(s)	820, 1442
Bse118I	RCCGGY	1 cut(s)	174
Bse1I	ACTGG	3 cut(s)	189, 984, 1542
Bse3DI	GCAATG	1 cut(s)	1395
BseBI	CCWGG	3 cut(s)	72, 86, 1091
BseDI	CCNNGG	6 cut(s)	9, 70, 405, 756, 1089, 1110
BseGI	GGATG	1 cut(s)	833
BseLI	CCNNNNNNNGG	2 cut(s)	820, 1442
BseMI	GCAATG	1 cut(s)	1395
BseMII	CTCAG	3 cut(s)	527, 1317, 1539
BseNI	ACTGG	3 cut(s)	189, 984, 1542
BseRI	GAGGAG	3 cut(s)	301, 1081, 1155
BseXI	GCAGC	7 cut(s)	246, 316, 661, 689, 1027, 1219, 1394
BseYI	CCCAGC	1 cut(s)	1176
BsgI	GTGCAG	4 cut(s)	295, 882, 1053, 1269
BshFI	GGCC	4 cut(s)	60, 362, 825, 954
BshNI	GGYRCC	4 cut(s)	171, 392, 850, 1025
BsiHKAI	GWGCWC	2 cut(s)	18, 1109
BsiSI	CCGG	5 cut(s)	57, 156, 175, 743, 1152
BslFI	GGGAC	4 cut(s)	53, 83, 1002, 1134
BslI	CCNNNNNNNGG	2 cut(s)	820, 1442
BsmAI	GTCTC	4 cut(s)	127, 433, 635, 1063
BsmBI	CGTCTC	1 cut(s)	127
BsmFI	GGGAC	4 cut(s)	53, 83, 1002, 1134
BsmI	GAATGC	2 cut(s)	907, 970
BsnI	GGCC	4 cut(s)	60, 362, 825, 954
Bsp119I	TTCGAA	1 cut(s)	724
Bsp1286I	GDGCHC	4 cut(s)	18, 93, 295, 1109
Bsp143I	GATC	1 cut(s)	789
Bsp19I	CCATGG	1 cut(s)	405
BspANI	GGCC	4 cut(s)	60, 362, 825, 954
BspCNI	CTCAG	3 cut(s)	526, 1316, 1540
BspHI	TCATGA	1 cut(s)	1260
BspMAI	CTGCAG	1 cut(s)	679
BspPI	GGATC	1 cut(s)	784
BspT104I	TTCGAA	1 cut(s)	724
BspT107I	GGYRCC	4 cut(s)	171, 392, 850, 1025
BsrDI	GCAATG	1 cut(s)	1395
BsrFI	RCCGGY	1 cut(s)	174
BsrI	ACTGG	3 cut(s)	189, 984, 1542
BssAI	RCCGGY	1 cut(s)	174
BssECI	CCNNGG	6 cut(s)	9, 70, 405, 756, 1089, 1110
BssMI	GATC	1 cut(s)	789
BssNI	GRCGYC	1 cut(s)	147
BssT1I	CCWWGG	3 cut(s)	405, 756, 1110
Bst2UI	CCWGG	3 cut(s)	72, 86, 1091
Bst4CI	ACNGT	4 cut(s)	97, 1189, 1530, 1585
Bst6I	CTCTTC	2 cut(s)	320, 325
BstACI	GRCGYC	1 cut(s)	147
BstAPI	GCANNNNNTGC	4 cut(s)	955, 1040, 1161, 1607
BstBI	TTCGAA	1 cut(s)	724
BstC8I	GCNNGC	2 cut(s)	844, 956
BstDEI	CTNAG	6 cut(s)	513, 544, 620, 729, 1303, 1548
BstDSI	CCRYGG	1 cut(s)	405
BstENI	CCTNNNNNAGG	1 cut(s)	818
BstF5I	GGATG	1 cut(s)	833
BstHHI	GCGC	2 cut(s)	430, 960
BstKTI	GATC	1 cut(s)	792
BstMAI	GTCTC	4 cut(s)	127, 433, 635, 1063
BstMBI	GATC	1 cut(s)	789
BstMWI	GCNNNNNNNGC	9 cut(s)	290, 401, 674, 848, 955, 1040, 1081, 1161, 1607
BstNI	CCWGG	3 cut(s)	72, 86, 1091
BstNSI	RCATGY	1 cut(s)	1421
BstSCI	CCNGG	6 cut(s)	70, 84, 155, 742, 1089, 1150
BstSFI	CTRYAG	1 cut(s)	675
BstV1I	GCAGC	7 cut(s)	246, 316, 661, 689, 1027, 1219, 1394
BsuRI	GGCC	4 cut(s)	60, 362, 825, 954
BtgI	CCRYGG	1 cut(s)	405
BtgZI	GCGATG	1 cut(s)	252
BtsCI	GGATG	1 cut(s)	833
BtsI	GCAGTG	1 cut(s)	1341
BtsIMutI	CAGTG	4 cut(s)	1341, 1526, 1545, 1590
Cac8I	GCNNGC	2 cut(s)	844, 956
CaiI	CAGNNNCTG	1 cut(s)	1040
CciI	TCATGA	1 cut(s)	1260
CfoI	GCGC	2 cut(s)	430, 960
Cfr10I	RCCGGY	1 cut(s)	174
Cfr13I	GGNCC	4 cut(s)	360, 823, 989, 1148
CseI	GACGC	1 cut(s)	136
Csp6I	GTAC	3 cut(s)	830, 1220, 1524
CviAII	CATG	7 cut(s)	364, 406, 787, 847, 950, 1261, 1418
CviQI	GTAC	3 cut(s)	830, 1220, 1524
DdeI	CTNAG	6 cut(s)	513, 544, 620, 729, 1303, 1548
DpnI	GATC	1 cut(s)	791
DpnII	GATC	1 cut(s)	789
DraI	TTTAAA	1 cut(s)	574
DriI	GACNNNNNGTC	1 cut(s)	1381
Eam1104I	CTCTTC	2 cut(s)	320, 325
Eam1105I	GACNNNNNGTC	1 cut(s)	1381
EarI	CTCTTC	2 cut(s)	320, 325
EciI	GGCGGA	1 cut(s)	770
Ecl136II	GAGCTC	1 cut(s)	16
Eco130I	CCWWGG	3 cut(s)	405, 756, 1110
Eco24I	GRGCYC	3 cut(s)	18, 93, 295
Eco47I	GGWCC	2 cut(s)	989, 1148
Eco53kI	GAGCTC	1 cut(s)	16
Eco57I	CTGAAG	3 cut(s)	819, 840, 1212
EcoICRI	GAGCTC	1 cut(s)	16
EcoNI	CCTNNNNNAGG	1 cut(s)	818
EcoO109I	RGGNCCY	3 cut(s)	823, 989, 1148
EcoRI	GAATTC	1 cut(s)	930
EcoRII	CCWGG	3 cut(s)	70, 84, 1089
EcoT14I	CCWWGG	3 cut(s)	405, 756, 1110
EcoT22I	ATGCAT	1 cut(s)	595
EcoT38I	GRGCYC	3 cut(s)	18, 93, 295
ErhI	CCWWGG	3 cut(s)	405, 756, 1110
Esp3I	CGTCTC	1 cut(s)	127
FaeI	CATG	7 cut(s)	367, 409, 790, 850, 953, 1264, 1421
FalI	AAGNNNNNCTT	2 cut(s)	527, 559
FaqI	GGGAC	4 cut(s)	53, 83, 1002, 1134
FatI	CATG	7 cut(s)	363, 405, 786, 846, 949, 1260, 1417
FauI	CCCGC	1 cut(s)	181
FauNDI	CATATG	1 cut(s)	595
Fnu4HI	GCNGC	9 cut(s)	235, 305, 402, 431, 675, 678, 1041, 1233, 1408
FokI	GGATG	1 cut(s)	820
FriOI	GRGCYC	3 cut(s)	18, 93, 295
Fsp4HI	GCNGC	9 cut(s)	235, 305, 402, 431, 675, 678, 1041, 1233, 1408
FspBI	CTAG	3 cut(s)	734, 827, 1490
GlaI	GCGC	2 cut(s)	429, 959
GluI	GCNGC	9 cut(s)	235, 305, 402, 431, 675, 678, 1041, 1233, 1408
GsaI	CCCAGC	1 cut(s)	1180
GsuI	CTGGAG	3 cut(s)	107, 470, 1001
HaeIII	GGCC	4 cut(s)	60, 362, 825, 954
HapII	CCGG	5 cut(s)	57, 156, 175, 743, 1152
HgaI	GACGC	1 cut(s)	136
HhaI	GCGC	2 cut(s)	430, 960
Hin1I	GRCGYC	1 cut(s)	147
Hin1II	CATG	7 cut(s)	367, 409, 790, 850, 953, 1264, 1421
Hin6I	GCGC	2 cut(s)	428, 958
HinP1I	GCGC	2 cut(s)	428, 958
HinfI	GANTC	4 cut(s)	47, 254, 721, 752
HpaII	CCGG	5 cut(s)	57, 156, 175, 743, 1152
HphI	GGTGA	3 cut(s)	235, 479, 903
Hpy166II	GTNNAC	5 cut(s)	470, 1199, 1341, 1423, 1526
Hpy188I	TCNGA	4 cut(s)	13, 131, 297, 936
Hpy8I	GTNNAC	5 cut(s)	470, 1199, 1341, 1423, 1526
Hpy99I	CGWCG	1 cut(s)	152
HpyAV	CCTTC	6 cut(s)	351, 529, 794, 864, 915, 1236
HpyCH4III	ACNGT	4 cut(s)	97, 1189, 1530, 1585
HpyCH4IV	ACGT	1 cut(s)	419
HpyF10VI	GCNNNNNNNGC	9 cut(s)	290, 401, 674, 848, 955, 1040, 1081, 1161, 1607
HpyF3I	CTNAG	6 cut(s)	513, 544, 620, 729, 1303, 1548
HpySE526I	ACGT	1 cut(s)	419
Hsp92I	GRCGYC	1 cut(s)	147
Hsp92II	CATG	7 cut(s)	367, 409, 790, 850, 953, 1264, 1421
HspAI	GCGC	2 cut(s)	428, 958
KflI	GGGWCCC	2 cut(s)	989, 1148
Kzo9I	GATC	1 cut(s)	789
LmnI	GCTCC	5 cut(s)	13, 88, 571, 745, 1013
Lsp1109I	GCAGC	7 cut(s)	246, 316, 661, 689, 1027, 1219, 1394
LweI	GCATC	2 cut(s)	1300, 1468
MaeI	CTAG	3 cut(s)	734, 827, 1490
MaeII	ACGT	1 cut(s)	419
MaeIII	GTNAC	3 cut(s)	1183, 1241, 1533
MalI	GATC	1 cut(s)	791
MboI	GATC	1 cut(s)	789
MboII	GAAGA	4 cut(s)	337, 342, 548, 1289
MfeI	CAATTG	3 cut(s)	614, 1079, 1602
MhlI	GDGCHC	4 cut(s)	18, 93, 295, 1109
MlyI	GAGTC	2 cut(s)	41, 263
Mph1103I	ATGCAT	1 cut(s)	595
MseI	TTAA	3 cut(s)	573, 890, 1125
MspA1I	CMGCKG	3 cut(s)	307, 680, 1232
MspI	CCGG	5 cut(s)	57, 156, 175, 743, 1152
MspR9I	CCNGG	6 cut(s)	72, 86, 157, 744, 1091, 1152
MunI	CAATTG	3 cut(s)	614, 1079, 1602
Mva1269I	GAATGC	2 cut(s)	907, 970
MvaI	CCWGG	3 cut(s)	72, 86, 1091
MwoI	GCNNNNNNNGC	9 cut(s)	290, 401, 674, 848, 955, 1040, 1081, 1161, 1607
NciI	CCSGG	3 cut(s)	157, 744, 1152
NcoI	CCATGG	1 cut(s)	405
NdeI	CATATG	1 cut(s)	595
NdeII	GATC	1 cut(s)	789
NlaIII	CATG	7 cut(s)	367, 409, 790, 850, 953, 1264, 1421
NsiI	ATGCAT	1 cut(s)	595
NspI	RCATGY	1 cut(s)	1421
NspV	TTCGAA	1 cut(s)	724
PagI	TCATGA	1 cut(s)	1260
PciI	ACATGT	1 cut(s)	1417
PctI	GAATGC	2 cut(s)	907, 970
PfeI	GAWTC	2 cut(s)	721, 752
PfoI	TCCNGGA	1 cut(s)	84
PkrI	GCNGC	9 cut(s)	236, 306, 403, 432, 676, 679, 1042, 1234, 1409
PleI	GAGTC	2 cut(s)	41, 262
PpsI	GAGTC	2 cut(s)	41, 262
PpuMI	RGGWCCY	2 cut(s)	989, 1148
PscI	ACATGT	1 cut(s)	1417
PsiI	TTATAA	1 cut(s)	819
Psp124BI	GAGCTC	1 cut(s)	18
Psp1406I	AACGTT	1 cut(s)	419
Psp5II	RGGWCCY	2 cut(s)	989, 1148
Psp6I	CCWGG	3 cut(s)	70, 84, 1089
PspFI	CCCAGC	1 cut(s)	1176
PspGI	CCWGG	3 cut(s)	70, 84, 1089
PspPI	GGNCC	4 cut(s)	360, 823, 989, 1148
PspPPI	RGGWCCY	2 cut(s)	989, 1148
PstI	CTGCAG	1 cut(s)	679
PstNI	CAGNNNCTG	1 cut(s)	1040
PvuII	CAGCTG	2 cut(s)	680, 1232
RsaI	GTAC	3 cut(s)	831, 1221, 1525
RsaNI	GTAC	3 cut(s)	830, 1220, 1524
SacI	GAGCTC	1 cut(s)	18
SaqAI	TTAA	3 cut(s)	573, 890, 1125
SatI	GCNGC	9 cut(s)	235, 305, 402, 431, 675, 678, 1041, 1233, 1408
Sau3AI	GATC	1 cut(s)	789
Sau96I	GGNCC	4 cut(s)	360, 823, 989, 1148
ScaI	AGTACT	1 cut(s)	1221
SchI	GAGTC	2 cut(s)	41, 263
ScrFI	CCNGG	6 cut(s)	72, 86, 157, 744, 1091, 1152
SduI	GDGCHC	4 cut(s)	18, 93, 295, 1109
SfaNI	GCATC	2 cut(s)	1300, 1468
SfcI	CTRYAG	1 cut(s)	675
SfuI	TTCGAA	1 cut(s)	724
SinI	GGWCC	2 cut(s)	989, 1148
SmlI	CTYRAG	3 cut(s)	434, 1274, 1364
SmoI	CTYRAG	3 cut(s)	434, 1274, 1364
SspI	AATATT	2 cut(s)	553, 1502
SspMI	CTAG	3 cut(s)	734, 827, 1490
SstI	GAGCTC	1 cut(s)	18
StyD4I	CCNGG	6 cut(s)	70, 84, 155, 742, 1089, 1150
StyI	CCWWGG	3 cut(s)	405, 756, 1110
TaaI	ACNGT	4 cut(s)	97, 1189, 1530, 1585
TaiI	ACGT	1 cut(s)	422
TaqI	TCGA	3 cut(s)	257, 724, 1467
TatI	WGTACW	1 cut(s)	1219
TauI	GCSGC	2 cut(s)	404, 433
TfiI	GAWTC	2 cut(s)	721, 752
Tru1I	TTAA	3 cut(s)	573, 890, 1125
Tru9I	TTAA	3 cut(s)	573, 890, 1125
TscAI	CASTG	4 cut(s)	1348, 1533, 1552, 1590
TseI	GCWGC	7 cut(s)	234, 304, 674, 677, 1040, 1232, 1407
TspDTI	ATGAA	4 cut(s)	380, 956, 1249, 1277
TspGWI	ACGGA	2 cut(s)	109, 487
TspRI	CASTG	4 cut(s)	1348, 1533, 1552, 1590
VpaK11BI	GGWCC	2 cut(s)	989, 1148
XagI	CCTNNNNNAGG	1 cut(s)	818
XapI	RAATTY	2 cut(s)	649, 930
XceI	RCATGY	1 cut(s)	1421
XcmI	CCANNNNNNNNNTGG	2 cut(s)	403, 844
XspI	CTAG	3 cut(s)	734, 827, 1490
ZrmI	AGTACT	1 cut(s)	1221
Zsp2I	ATGCAT	1 cut(s)	595

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.