Regulator of Vps4 activity in the MVB pathway
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G13340 |
| fragaria_vesca | FvH4_4g27660 |
| malus_domestica | MD13G1043900.v1.1 MD16G1044700.v1.1 |
| prunus_persica | Prupe.1G308600_v2.0.a1 |
| pyrus_communis | pycom13g03850 pycom16g03920 pycom16g03930 |
| rosa_chinensis | RchiOBHm_Chr4g0435491 |
| rosa_laevigata | RLG00000006588 |
| rosa_multiflora | Rmu_co8134732.1_g000001 Rmu_sc0001940.1_g000028 |
| rosa_roxburghii | Rroxscaffold_5G00376720 |
| rosa_rugosa | Rorug04G0285600 |
| rosa_samantha | Rh4AG341300 Rh4BG349500 Rh4CG364200 Rh4DG343800 |
| rosa_wichuraiana | Rw4G029770 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 140, 200, 238 |
| AcsI | RAATTY | 1 cut(s) | 108 |
| AgsI | TTSAA | 3 cut(s) | 125, 136, 155 |
| Alw26I | GTCTC | 1 cut(s) | 102 |
| AoxI | GGCC | 1 cut(s) | 24 |
| ApeKI | GCWGC | 1 cut(s) | 164 |
| ApoI | RAATTY | 1 cut(s) | 108 |
| AspS9I | GGNCC | 1 cut(s) | 224 |
| AvaII | GGWCC | 1 cut(s) | 224 |
| BbvI | GCAGC | 1 cut(s) | 176 |
| BciVI | GTATCC | 1 cut(s) | 37 |
| BcoDI | GTCTC | 1 cut(s) | 102 |
| BfaI | CTAG | 1 cut(s) | 243 |
| BfmI | CTRYAG | 1 cut(s) | 162 |
| BfuI | GTATCC | 1 cut(s) | 37 |
| BisI | GCNGC | 1 cut(s) | 165 |
| BlsI | GCNGC | 1 cut(s) | 166 |
| Bme18I | GGWCC | 1 cut(s) | 224 |
| BmgT120I | GGNCC | 1 cut(s) | 224 |
| BmiI | GGNNCC | 1 cut(s) | 225 |
| BpmI | CTGGAG | 1 cut(s) | 198 |
| BseMII | CTCAG | 1 cut(s) | 21 |
| BseXI | GCAGC | 1 cut(s) | 176 |
| BshFI | GGCC | 1 cut(s) | 26 |
| BsiSI | CCGG | 1 cut(s) | 129 |
| BslFI | GGGAC | 2 cut(s) | 52, 237 |
| BsmAI | GTCTC | 1 cut(s) | 102 |
| BsmBI | CGTCTC | 1 cut(s) | 102 |
| BsmFI | GGGAC | 2 cut(s) | 52, 237 |
| BsnI | GGCC | 1 cut(s) | 26 |
| BspACI | CCGC | 3 cut(s) | 140, 200, 238 |
| BspANI | GGCC | 1 cut(s) | 26 |
| BspCNI | CTCAG | 1 cut(s) | 20 |
| BspLI | GGNNCC | 1 cut(s) | 225 |
| BspMAI | CTGCAG | 1 cut(s) | 166 |
| Bst4CI | ACNGT | 1 cut(s) | 49 |
| BstC8I | GCNNGC | 2 cut(s) | 24, 200 |
| BstDEI | CTNAG | 1 cut(s) | 7 |
| BstMAI | GTCTC | 1 cut(s) | 102 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 173, 199 |
| BstSFI | CTRYAG | 1 cut(s) | 162 |
| BstV1I | GCAGC | 1 cut(s) | 176 |
| BsuI | GTATCC | 1 cut(s) | 37 |
| BsuRI | GGCC | 1 cut(s) | 26 |
| BtgZI | GCGATG | 1 cut(s) | 157 |
| Cac8I | GCNNGC | 2 cut(s) | 24, 200 |
| Cfr13I | GGNCC | 1 cut(s) | 224 |
| CviJI | RGCY | 5 cut(s) | 26, 132, 151, 198, 258 |
| CviKI_1 | RGCY | 5 cut(s) | 26, 132, 151, 198, 258 |
| DdeI | CTNAG | 1 cut(s) | 7 |
| EciI | GGCGGA | 1 cut(s) | 155 |
| Eco47I | GGWCC | 1 cut(s) | 224 |
| Esp3I | CGTCTC | 1 cut(s) | 102 |
| FaiI | YATR | 1 cut(s) | 102 |
| FaqI | GGGAC | 2 cut(s) | 52, 237 |
| FauI | CCCGC | 1 cut(s) | 207 |
| Fnu4HI | GCNGC | 1 cut(s) | 165 |
| Fsp4HI | GCNGC | 1 cut(s) | 165 |
| FspBI | CTAG | 1 cut(s) | 243 |
| GluI | GCNGC | 1 cut(s) | 165 |
| GsuI | CTGGAG | 1 cut(s) | 198 |
| HaeIII | GGCC | 1 cut(s) | 26 |
| HapII | CCGG | 1 cut(s) | 129 |
| HinfI | GANTC | 1 cut(s) | 143 |
| HpaII | CCGG | 1 cut(s) | 129 |
| Hpy188I | TCNGA | 2 cut(s) | 10, 263 |
| Hpy188III | TCNNGA | 1 cut(s) | 186 |
| HpyAV | CCTTC | 4 cut(s) | 123, 130, 183, 214 |
| HpyCH4III | ACNGT | 1 cut(s) | 49 |
| HpyCH4IV | ACGT | 1 cut(s) | 213 |
| HpyCH4V | TGCA | 1 cut(s) | 164 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 173, 199 |
| HpyF3I | CTNAG | 1 cut(s) | 7 |
| HpySE526I | ACGT | 1 cut(s) | 213 |
| LpnPI | CCDG | 5 cut(s) | 8, 142, 162, 171, 174 |
| Lsp1109I | GCAGC | 1 cut(s) | 176 |
| MaeI | CTAG | 1 cut(s) | 243 |
| MaeII | ACGT | 1 cut(s) | 213 |
| MluCI | AATT | 1 cut(s) | 108 |
| MlyI | GAGTC | 1 cut(s) | 152 |
| MnlI | CCTC | 5 cut(s) | 16, 103, 111, 141, 173 |
| MseI | TTAA | 1 cut(s) | 209 |
| MspI | CCGG | 1 cut(s) | 129 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 173, 199 |
| NlaIV | GGNNCC | 1 cut(s) | 225 |
| PkrI | GCNGC | 1 cut(s) | 166 |
| PleI | GAGTC | 1 cut(s) | 151 |
| PpsI | GAGTC | 1 cut(s) | 151 |
| PspN4I | GGNNCC | 1 cut(s) | 225 |
| PspPI | GGNCC | 1 cut(s) | 224 |
| PstI | CTGCAG | 1 cut(s) | 166 |
| SaqAI | TTAA | 1 cut(s) | 209 |
| SatI | GCNGC | 1 cut(s) | 165 |
| Sau96I | GGNCC | 1 cut(s) | 224 |
| SchI | GAGTC | 1 cut(s) | 152 |
| SetI | ASST | 2 cut(s) | 122, 216 |
| SfcI | CTRYAG | 1 cut(s) | 162 |
| SinI | GGWCC | 1 cut(s) | 224 |
| Sse9I | AATT | 1 cut(s) | 108 |
| SsiI | CCGC | 3 cut(s) | 140, 200, 238 |
| SspMI | CTAG | 1 cut(s) | 243 |
| TaaI | ACNGT | 1 cut(s) | 49 |
| TaiI | ACGT | 1 cut(s) | 216 |
| TaqI | TCGA | 2 cut(s) | 116, 146 |
| TasI | AATT | 1 cut(s) | 108 |
| Tru1I | TTAA | 1 cut(s) | 209 |
| Tru9I | TTAA | 1 cut(s) | 209 |
| TseI | GCWGC | 1 cut(s) | 164 |
| TspGWI | ACGGA | 1 cut(s) | 56 |
| VpaK11BI | GGWCC | 1 cut(s) | 224 |
| XapI | RAATTY | 1 cut(s) | 108 |
| XspI | CTAG | 1 cut(s) | 243 |