DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication
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| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD16G1122100.v1.1 |
| pyrus_communis | pycom16g10460 |
| rosa_chinensis | RchiOBHm_Chr4g0417231 RchiOBHm_Chr4g0417241 RchiOBHm_Chr4g0417251 RchiOBHm_Chr4g0417261 |
| rosa_laevigata | RLG00000007921 |
| rosa_multiflora | Rmu_sc0000646.1_g000011 Rmu_sc0002370.1_g000020 |
| rosa_samantha | Rh4AG209800 Rh4CG220900 Rh4DG207500 Rh4DG207600 Rh4DG207700 |
| rosa_wichuraiana | Rw4G017730 Rw4G017740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 79 |
| AclWI | GGATC | 1 cut(s) | 159 |
| AgsI | TTSAA | 1 cut(s) | 173 |
| AjnI | CCWGG | 1 cut(s) | 192 |
| AlwI | GGATC | 1 cut(s) | 159 |
| AspS9I | GGNCC | 1 cut(s) | 197 |
| AvaII | GGWCC | 1 cut(s) | 197 |
| BbsI | GAAGAC | 1 cut(s) | 77 |
| BciT130I | CCWGG | 1 cut(s) | 194 |
| BfmI | CTRYAG | 1 cut(s) | 132 |
| Bme1390I | CCNGG | 1 cut(s) | 194 |
| Bme18I | GGWCC | 1 cut(s) | 197 |
| BmgT120I | GGNCC | 1 cut(s) | 197 |
| BmiI | GGNNCC | 1 cut(s) | 198 |
| BmrFI | CCNGG | 1 cut(s) | 194 |
| BoxI | GACNNNNGTC | 1 cut(s) | 32 |
| BpiI | GAAGAC | 1 cut(s) | 77 |
| BpuEI | CTTGAG | 1 cut(s) | 169 |
| Bsa29I | ATCGAT | 1 cut(s) | 154 |
| BsaJI | CCNNGG | 1 cut(s) | 193 |
| BseBI | CCWGG | 1 cut(s) | 194 |
| BseCI | ATCGAT | 1 cut(s) | 154 |
| BseDI | CCNNGG | 1 cut(s) | 193 |
| BseMII | CTCAG | 1 cut(s) | 201 |
| BshVI | ATCGAT | 1 cut(s) | 154 |
| Bsp143I | GATC | 1 cut(s) | 151 |
| BspACI | CCGC | 1 cut(s) | 79 |
| BspCNI | CTCAG | 1 cut(s) | 202 |
| BspDI | ATCGAT | 1 cut(s) | 154 |
| BspLI | GGNNCC | 1 cut(s) | 198 |
| BspPI | GGATC | 1 cut(s) | 159 |
| BssECI | CCNNGG | 1 cut(s) | 193 |
| BssMI | GATC | 1 cut(s) | 151 |
| Bst2UI | CCWGG | 1 cut(s) | 194 |
| BstDEI | CTNAG | 1 cut(s) | 210 |
| BstKTI | GATC | 1 cut(s) | 154 |
| BstMBI | GATC | 1 cut(s) | 151 |
| BstNI | CCWGG | 1 cut(s) | 194 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 32 |
| BstSCI | CCNGG | 1 cut(s) | 192 |
| BstSFI | CTRYAG | 1 cut(s) | 132 |
| BstV2I | GAAGAC | 1 cut(s) | 77 |
| Bsu15I | ATCGAT | 1 cut(s) | 154 |
| BsuTUI | ATCGAT | 1 cut(s) | 154 |
| Cfr13I | GGNCC | 1 cut(s) | 197 |
| ClaI | ATCGAT | 1 cut(s) | 154 |
| CviJI | RGCY | 1 cut(s) | 176 |
| CviKI_1 | RGCY | 1 cut(s) | 176 |
| DdeI | CTNAG | 1 cut(s) | 210 |
| DpnI | GATC | 1 cut(s) | 153 |
| DpnII | GATC | 1 cut(s) | 151 |
| Eco32I | GATATC | 1 cut(s) | 43 |
| Eco47I | GGWCC | 1 cut(s) | 197 |
| EcoO109I | RGGNCCY | 1 cut(s) | 197 |
| EcoRII | CCWGG | 1 cut(s) | 192 |
| EcoRV | GATATC | 1 cut(s) | 43 |
| EcoT22I | ATGCAT | 1 cut(s) | 6 |
| FaiI | YATR | 4 cut(s) | 6, 15, 21, 134 |
| HinfI | GANTC | 1 cut(s) | 160 |
| Hpy188I | TCNGA | 2 cut(s) | 211, 224 |
| Hpy188III | TCNNGA | 1 cut(s) | 200 |
| HpyAV | CCTTC | 1 cut(s) | 142 |
| HpyCH4V | TGCA | 1 cut(s) | 4 |
| HpyF3I | CTNAG | 1 cut(s) | 210 |
| Kzo9I | GATC | 1 cut(s) | 151 |
| LpnPI | CCDG | 3 cut(s) | 179, 206, 213 |
| MaeIII | GTNAC | 2 cut(s) | 25, 188 |
| MalI | GATC | 1 cut(s) | 153 |
| MboI | GATC | 1 cut(s) | 151 |
| MboII | GAAGA | 1 cut(s) | 77 |
| MluCI | AATT | 1 cut(s) | 74 |
| MlyI | GAGTC | 1 cut(s) | 154 |
| MnlI | CCTC | 1 cut(s) | 193 |
| Mph1103I | ATGCAT | 1 cut(s) | 6 |
| MslI | CAYNNNNRTG | 1 cut(s) | 50 |
| MspR9I | CCNGG | 1 cut(s) | 194 |
| MvaI | CCWGG | 1 cut(s) | 194 |
| NdeII | GATC | 1 cut(s) | 151 |
| NlaIV | GGNNCC | 1 cut(s) | 198 |
| NmuCI | GTSAC | 1 cut(s) | 25 |
| NsiI | ATGCAT | 1 cut(s) | 6 |
| PleI | GAGTC | 1 cut(s) | 154 |
| PpsI | GAGTC | 1 cut(s) | 154 |
| PpuMI | RGGWCCY | 1 cut(s) | 197 |
| PshAI | GACNNNNGTC | 1 cut(s) | 32 |
| Psp5II | RGGWCCY | 1 cut(s) | 197 |
| Psp6I | CCWGG | 1 cut(s) | 192 |
| PspGI | CCWGG | 1 cut(s) | 192 |
| PspN4I | GGNNCC | 1 cut(s) | 198 |
| PspPI | GGNCC | 1 cut(s) | 197 |
| PspPPI | RGGWCCY | 1 cut(s) | 197 |
| RseI | CAYNNNNRTG | 1 cut(s) | 50 |
| Sau3AI | GATC | 1 cut(s) | 151 |
| Sau96I | GGNCC | 1 cut(s) | 197 |
| SchI | GAGTC | 1 cut(s) | 154 |
| ScrFI | CCNGG | 1 cut(s) | 194 |
| SetI | ASST | 2 cut(s) | 20, 195 |
| SfcI | CTRYAG | 1 cut(s) | 132 |
| SgeI | CNNG | 6 cut(s) | 74, 155, 198, 205, 206, 212 |
| SinI | GGWCC | 1 cut(s) | 197 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 50 |
| SmlI | CTYRAG | 1 cut(s) | 184 |
| SmoI | CTYRAG | 1 cut(s) | 184 |
| Sse9I | AATT | 1 cut(s) | 74 |
| SsiI | CCGC | 1 cut(s) | 79 |
| StyD4I | CCNGG | 1 cut(s) | 192 |
| TaqI | TCGA | 1 cut(s) | 154 |
| TasI | AATT | 1 cut(s) | 74 |
| TseFI | GTSAC | 1 cut(s) | 25 |
| Tsp45I | GTSAC | 1 cut(s) | 25 |
| VpaK11BI | GGWCC | 1 cut(s) | 197 |
| Zsp2I | ATGCAT | 1 cut(s) | 6 |