No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| malus_domestica | MD16G1122100.v1.1 |
| pyrus_communis | pycom16g10460 |
| rosa_chinensis | RchiOBHm_Chr4g0417231 RchiOBHm_Chr4g0417241 RchiOBHm_Chr4g0417251 RchiOBHm_Chr4g0417261 |
| rosa_laevigata | RLG00000007921 |
| rosa_multiflora | Rmu_sc0000646.1_g000011 Rmu_sc0002370.1_g000020 |
| rosa_samantha | Rh4AG209800 Rh4CG220900 Rh4DG207500 Rh4DG207600 Rh4DG207700 |
| rosa_wichuraiana | Rw4G017730 Rw4G017740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 158 |
| AciI | CCGC | 1 cut(s) | 71 |
| AclWI | GGATC | 1 cut(s) | 268 |
| AdeI | CACNNNGTG | 1 cut(s) | 316 |
| AfaI | GTAC | 1 cut(s) | 434 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 158 |
| AjiI | CACGTC | 1 cut(s) | 224 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 141, 173 |
| AluBI | AGCT | 1 cut(s) | 293 |
| AluI | AGCT | 1 cut(s) | 293 |
| Alw26I | GTCTC | 2 cut(s) | 214, 389 |
| AlwI | GGATC | 1 cut(s) | 268 |
| ApeKI | GCWGC | 1 cut(s) | 32 |
| AsuC2I | CCSGG | 1 cut(s) | 414 |
| AsuHPI | GGTGA | 3 cut(s) | 103, 186, 328 |
| BauI | CACGAG | 1 cut(s) | 386 |
| BbvI | GCAGC | 1 cut(s) | 19 |
| BccI | CCATC | 1 cut(s) | 239 |
| BciVI | GTATCC | 1 cut(s) | 189 |
| BcnI | CCSGG | 1 cut(s) | 414 |
| BcoDI | GTCTC | 2 cut(s) | 214, 389 |
| BfuI | GTATCC | 1 cut(s) | 189 |
| BisI | GCNGC | 1 cut(s) | 33 |
| BlsI | GCNGC | 1 cut(s) | 34 |
| Bme1390I | CCNGG | 1 cut(s) | 414 |
| BmgBI | CACGTC | 1 cut(s) | 224 |
| BmiI | GGNNCC | 1 cut(s) | 150 |
| BmrFI | CCNGG | 1 cut(s) | 414 |
| BmsI | GCATC | 3 cut(s) | 13, 274, 370 |
| BpmI | CTGGAG | 2 cut(s) | 62, 309 |
| BpuMI | CCSGG | 1 cut(s) | 414 |
| BsaBI | GATNNNNATC | 1 cut(s) | 300 |
| BsaJI | CCNNGG | 1 cut(s) | 144 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 158 |
| Bse1I | ACTGG | 1 cut(s) | 325 |
| Bse8I | GATNNNNATC | 1 cut(s) | 300 |
| BseDI | CCNNGG | 1 cut(s) | 144 |
| BseGI | GGATG | 2 cut(s) | 28, 79 |
| BseJI | GATNNNNATC | 1 cut(s) | 300 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BseMII | CTCAG | 2 cut(s) | 80, 180 |
| BseNI | ACTGG | 1 cut(s) | 325 |
| BseRI | GAGGAG | 1 cut(s) | 124 |
| BseXI | GCAGC | 1 cut(s) | 19 |
| BsgI | GTGCAG | 1 cut(s) | 293 |
| BsiSI | CCGG | 1 cut(s) | 413 |
| BslFI | GGGAC | 1 cut(s) | 350 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 158 |
| BsmAI | GTCTC | 2 cut(s) | 214, 389 |
| BsmBI | CGTCTC | 1 cut(s) | 214 |
| BsmFI | GGGAC | 1 cut(s) | 350 |
| Bsp143I | GATC | 2 cut(s) | 273, 295 |
| BspACI | CCGC | 1 cut(s) | 71 |
| BspCNI | CTCAG | 2 cut(s) | 79, 181 |
| BspLI | GGNNCC | 1 cut(s) | 150 |
| BspPI | GGATC | 1 cut(s) | 268 |
| BsrI | ACTGG | 1 cut(s) | 325 |
| BssECI | CCNNGG | 1 cut(s) | 144 |
| BssMI | GATC | 2 cut(s) | 273, 295 |
| BssSI | CACGAG | 1 cut(s) | 386 |
| Bst2BI | CACGAG | 1 cut(s) | 386 |
| Bst6I | CTCTTC | 2 cut(s) | 111, 190 |
| BstC8I | GCNNGC | 1 cut(s) | 404 |
| BstDEI | CTNAG | 2 cut(s) | 66, 189 |
| BstF5I | GGATG | 2 cut(s) | 28, 79 |
| BstKTI | GATC | 2 cut(s) | 276, 298 |
| BstMAI | GTCTC | 2 cut(s) | 214, 389 |
| BstMBI | GATC | 2 cut(s) | 273, 295 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 32 |
| BstSCI | CCNGG | 1 cut(s) | 412 |
| BstV1I | GCAGC | 1 cut(s) | 19 |
| BsuI | GTATCC | 1 cut(s) | 189 |
| BtrI | CACGTC | 1 cut(s) | 224 |
| BtsCI | GGATG | 2 cut(s) | 28, 79 |
| Cac8I | GCNNGC | 1 cut(s) | 404 |
| Csp6I | GTAC | 1 cut(s) | 433 |
| CviJI | RGCY | 2 cut(s) | 293, 324 |
| CviKI_1 | RGCY | 2 cut(s) | 293, 324 |
| CviQI | GTAC | 1 cut(s) | 433 |
| DdeI | CTNAG | 2 cut(s) | 66, 189 |
| DpnI | GATC | 2 cut(s) | 275, 297 |
| DpnII | GATC | 2 cut(s) | 273, 295 |
| DraIII | CACNNNGTG | 1 cut(s) | 316 |
| Eam1104I | CTCTTC | 2 cut(s) | 111, 190 |
| EarI | CTCTTC | 2 cut(s) | 111, 190 |
| EciI | GGCGGA | 1 cut(s) | 86 |
| Esp3I | CGTCTC | 1 cut(s) | 214 |
| FaiI | YATR | 5 cut(s) | 132, 350, 360, 420, 443 |
| FaqI | GGGAC | 1 cut(s) | 350 |
| Fnu4HI | GCNGC | 1 cut(s) | 33 |
| FokI | GGATG | 2 cut(s) | 35, 86 |
| Fsp4HI | GCNGC | 1 cut(s) | 33 |
| GluI | GCNGC | 1 cut(s) | 33 |
| GsuI | CTGGAG | 2 cut(s) | 62, 309 |
| HapII | CCGG | 1 cut(s) | 413 |
| HinfI | GANTC | 5 cut(s) | 11, 191, 227, 239, 258 |
| HpaII | CCGG | 1 cut(s) | 413 |
| HphI | GGTGA | 3 cut(s) | 103, 186, 328 |
| Hpy188I | TCNGA | 5 cut(s) | 10, 145, 190, 244, 459 |
| Hpy188III | TCNNGA | 3 cut(s) | 41, 231, 386 |
| HpyCH4IV | ACGT | 1 cut(s) | 223 |
| HpyCH4V | TGCA | 1 cut(s) | 310 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 32 |
| HpyF3I | CTNAG | 2 cut(s) | 66, 189 |
| HpySE526I | ACGT | 1 cut(s) | 223 |
| Kzo9I | GATC | 2 cut(s) | 273, 295 |
| LmnI | GCTCC | 1 cut(s) | 290 |
| LpnPI | CCDG | 9 cut(s) | 12, 21, 26, 53, 71, 273, 306, 345, 426 |
| Lsp1109I | GCAGC | 1 cut(s) | 19 |
| LweI | GCATC | 3 cut(s) | 13, 274, 370 |
| MaeII | ACGT | 1 cut(s) | 223 |
| MaeIII | GTNAC | 2 cut(s) | 192, 316 |
| MalI | GATC | 2 cut(s) | 275, 297 |
| MboI | GATC | 2 cut(s) | 273, 295 |
| MboII | GAAGA | 2 cut(s) | 128, 177 |
| MlyI | GAGTC | 3 cut(s) | 20, 200, 233 |
| MseI | TTAA | 1 cut(s) | 371 |
| MspI | CCGG | 1 cut(s) | 413 |
| MspR9I | CCNGG | 1 cut(s) | 414 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 32 |
| NciI | CCSGG | 1 cut(s) | 414 |
| NdeII | GATC | 2 cut(s) | 273, 295 |
| NlaIV | GGNNCC | 1 cut(s) | 150 |
| NmuCI | GTSAC | 2 cut(s) | 192, 316 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 229 |
| PfeI | GAWTC | 2 cut(s) | 227, 258 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 158 |
| PkrI | GCNGC | 1 cut(s) | 34 |
| PleI | GAGTC | 3 cut(s) | 19, 199, 233 |
| PpsI | GAGTC | 3 cut(s) | 19, 199, 233 |
| PspN4I | GGNNCC | 1 cut(s) | 150 |
| RsaI | GTAC | 1 cut(s) | 434 |
| RsaNI | GTAC | 1 cut(s) | 433 |
| SaqAI | TTAA | 1 cut(s) | 371 |
| SatI | GCNGC | 1 cut(s) | 33 |
| Sau3AI | GATC | 2 cut(s) | 273, 295 |
| SchI | GAGTC | 3 cut(s) | 20, 200, 233 |
| ScrFI | CCNGG | 1 cut(s) | 414 |
| SetI | ASST | 9 cut(s) | 93, 123, 159, 226, 268, 295, 331, 429, 452 |
| SfaNI | GCATC | 3 cut(s) | 13, 274, 370 |
| SsiI | CCGC | 1 cut(s) | 71 |
| SspI | AATATT | 1 cut(s) | 346 |
| StyD4I | CCNGG | 1 cut(s) | 412 |
| TaiI | ACGT | 1 cut(s) | 226 |
| TaqI | TCGA | 3 cut(s) | 232, 298, 429 |
| TfiI | GAWTC | 2 cut(s) | 227, 258 |
| Tru1I | TTAA | 1 cut(s) | 371 |
| Tru9I | TTAA | 1 cut(s) | 371 |
| TseFI | GTSAC | 2 cut(s) | 192, 316 |
| TseI | GCWGC | 1 cut(s) | 32 |
| Tsp45I | GTSAC | 2 cut(s) | 192, 316 |
| TspDTI | ATGAA | 3 cut(s) | 17, 48, 157 |
| TspGWI | ACGGA | 1 cut(s) | 35 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 158 |