SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G48310 AT1G48310 AT1G48310 AT1G48310 |
| fragaria_vesca | FvH4_4g21690 FvH4_4g21690 FvH4_4g21690 |
| malus_domestica | MD16G1134000.v1.1 |
| prunus_persica | Prupe.1G103200_v2.0.a1 |
| pyrus_communis | pycom13g12030 pycom16g11830 |
| rosa_chinensis | RchiOBHm_Chr4g0427901 |
| rosa_laevigata | RLG00000007202 |
| rosa_multiflora | Rmu_sc0000066.1_g000015 Rmu_sc0009221.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00369560 |
| rosa_rugosa | Rorug04G0219800 Rorug04G0220300 Rorug04G0220400 |
| rosa_samantha | Rh4AG277400 Rh4BG283200 Rh4CG298700 Rh4DG280300 |
| rosa_wichuraiana | Rw4G024100 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 599 |
| AccI | GTMKAC | 1 cut(s) | 963 |
| AccII | CGCG | 2 cut(s) | 65, 90 |
| AciI | CCGC | 3 cut(s) | 99, 148, 1314 |
| AclI | AACGTT | 1 cut(s) | 1010 |
| AclWI | GGATC | 3 cut(s) | 165, 359, 1303 |
| AcoI | YGGCCR | 1 cut(s) | 587 |
| AcsI | RAATTY | 3 cut(s) | 41, 232, 1492 |
| AfaI | GTAC | 1 cut(s) | 901 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 154, 1467 |
| AflIII | ACRYGT | 2 cut(s) | 63, 88 |
| AgsI | TTSAA | 4 cut(s) | 823, 926, 944, 1498 |
| AjnI | CCWGG | 3 cut(s) | 150, 309, 1329 |
| AluBI | AGCT | 7 cut(s) | 201, 257, 457, 940, 1111, 1480, 1540 |
| AluI | AGCT | 7 cut(s) | 201, 257, 457, 940, 1111, 1480, 1540 |
| Alw21I | GWGCWC | 1 cut(s) | 514 |
| Alw26I | GTCTC | 4 cut(s) | 54, 323, 411, 651 |
| AlwI | GGATC | 3 cut(s) | 165, 359, 1303 |
| AoxI | GGCC | 4 cut(s) | 587, 630, 721, 1218 |
| ApeKI | GCWGC | 8 cut(s) | 198, 254, 389, 392, 496, 937, 1353, 1519 |
| ApoI | RAATTY | 3 cut(s) | 41, 232, 1492 |
| AseI | ATTAAT | 1 cut(s) | 1275 |
| AspLEI | GCGC | 1 cut(s) | 35 |
| AspS9I | GGNCC | 1 cut(s) | 630 |
| AsuHPI | GGTGA | 3 cut(s) | 137, 368, 704 |
| AsuII | TTCGAA | 2 cut(s) | 230, 1443 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 669, 702 |
| BalI | TGGCCA | 1 cut(s) | 589 |
| BanII | GRGCYC | 1 cut(s) | 877 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1446, 1478 |
| Bbv12I | GWGCWC | 1 cut(s) | 514 |
| BbvCI | CCTCAGC | 1 cut(s) | 1299 |
| BbvI | GCAGC | 8 cut(s) | 210, 266, 376, 379, 508, 949, 1340, 1531 |
| BccI | CCATC | 5 cut(s) | 295, 616, 713, 1386, 1444 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 442, 476 |
| BciT130I | CCWGG | 3 cut(s) | 152, 311, 1331 |
| BciVI | GTATCC | 5 cut(s) | 141, 426, 697, 963, 1468 |
| BcoDI | GTCTC | 4 cut(s) | 54, 323, 411, 651 |
| BfaI | CTAG | 3 cut(s) | 273, 438, 1364 |
| BfoI | RGCGCY | 1 cut(s) | 36 |
| BfuI | GTATCC | 5 cut(s) | 141, 426, 697, 963, 1468 |
| BisI | GCNGC | 8 cut(s) | 199, 255, 390, 393, 497, 938, 1354, 1520 |
| BlpI | GCTNAGC | 1 cut(s) | 81 |
| BlsI | GCNGC | 8 cut(s) | 200, 256, 391, 394, 498, 939, 1355, 1521 |
| Bme1390I | CCNGG | 3 cut(s) | 152, 311, 1331 |
| BmgT120I | GGNCC | 1 cut(s) | 630 |
| BmrFI | CCNGG | 3 cut(s) | 152, 311, 1331 |
| BmrI | ACTGGG | 1 cut(s) | 31 |
| BmsI | GCATC | 2 cut(s) | 575, 788 |
| BmuI | ACTGGG | 1 cut(s) | 31 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 886, 918 |
| BpmI | CTGGAG | 1 cut(s) | 332 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1299 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 81 |
| Bpu14I | TTCGAA | 2 cut(s) | 230, 1443 |
| BpuEI | CTTGAG | 2 cut(s) | 816, 1235 |
| Bsa29I | ATCGAT | 2 cut(s) | 160, 991 |
| BsaI | GGTCTC | 1 cut(s) | 411 |
| BsaJI | CCNNGG | 1 cut(s) | 1330 |
| BsaWI | WCCGGW | 1 cut(s) | 266 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 722, 752 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 154, 1467 |
| Bse1I | ACTGG | 2 cut(s) | 26, 590 |
| BseBI | CCWGG | 3 cut(s) | 152, 311, 1331 |
| BseCI | ATCGAT | 2 cut(s) | 160, 991 |
| BseDI | CCNNGG | 1 cut(s) | 1330 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 154, 1467 |
| BseMII | CTCAG | 5 cut(s) | 95, 884, 1098, 1251, 1290 |
| BseNI | ACTGG | 2 cut(s) | 26, 590 |
| BseRI | GAGGAG | 2 cut(s) | 109, 112 |
| BseXI | GCAGC | 8 cut(s) | 210, 266, 376, 379, 508, 949, 1340, 1531 |
| Bsh1236I | CGCG | 2 cut(s) | 65, 90 |
| Bsh1285I | CGRYCG | 1 cut(s) | 920 |
| BshFI | GGCC | 4 cut(s) | 589, 632, 723, 1220 |
| BshVI | ATCGAT | 2 cut(s) | 160, 991 |
| BsiEI | CGRYCG | 1 cut(s) | 920 |
| BsiHKAI | GWGCWC | 1 cut(s) | 514 |
| BsiSI | CCGG | 1 cut(s) | 267 |
| BslFI | GGGAC | 4 cut(s) | 278, 718, 737, 898 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 154, 1467 |
| BsmAI | GTCTC | 4 cut(s) | 54, 323, 411, 651 |
| BsmBI | CGTCTC | 1 cut(s) | 54 |
| BsmFI | GGGAC | 4 cut(s) | 278, 718, 737, 898 |
| BsmI | GAATGC | 1 cut(s) | 1439 |
| BsnI | GGCC | 4 cut(s) | 589, 632, 723, 1220 |
| Bso31I | GGTCTC | 1 cut(s) | 411 |
| Bsp119I | TTCGAA | 2 cut(s) | 230, 1443 |
| Bsp1286I | GDGCHC | 2 cut(s) | 514, 877 |
| Bsp143I | GATC | 5 cut(s) | 142, 157, 161, 364, 1308 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 81 |
| BspACI | CCGC | 3 cut(s) | 99, 148, 1314 |
| BspANI | GGCC | 4 cut(s) | 589, 632, 723, 1220 |
| BspCNI | CTCAG | 5 cut(s) | 94, 885, 1099, 1252, 1291 |
| BspDI | ATCGAT | 2 cut(s) | 160, 991 |
| BspFNI | CGCG | 2 cut(s) | 65, 90 |
| BspHI | TCATGA | 1 cut(s) | 325 |
| BspPI | GGATC | 3 cut(s) | 165, 359, 1303 |
| BspT104I | TTCGAA | 2 cut(s) | 230, 1443 |
| BspTNI | GGTCTC | 1 cut(s) | 411 |
| BsrI | ACTGG | 2 cut(s) | 26, 590 |
| BssECI | CCNNGG | 1 cut(s) | 1330 |
| BssMI | GATC | 5 cut(s) | 142, 157, 161, 364, 1308 |
| BssNAI | GTATAC | 1 cut(s) | 964 |
| Bst1107I | GTATAC | 1 cut(s) | 964 |
| Bst2UI | CCWGG | 3 cut(s) | 152, 311, 1331 |
| Bst4CI | ACNGT | 5 cut(s) | 380, 685, 1072, 1339, 1467 |
| Bst6I | CTCTTC | 2 cut(s) | 243, 1230 |
| BstBI | TTCGAA | 2 cut(s) | 230, 1443 |
| BstC8I | GCNNGC | 5 cut(s) | 510, 853, 1222, 1351, 1478 |
| BstDEI | CTNAG | 8 cut(s) | 81, 361, 370, 893, 1107, 1260, 1299, 1305 |
| BstFNI | CGCG | 2 cut(s) | 65, 90 |
| BstH2I | RGCGCY | 1 cut(s) | 36 |
| BstHHI | GCGC | 1 cut(s) | 35 |
| BstKTI | GATC | 5 cut(s) | 145, 160, 164, 367, 1311 |
| BstMAI | GTCTC | 4 cut(s) | 54, 323, 411, 651 |
| BstMBI | GATC | 5 cut(s) | 142, 157, 161, 364, 1308 |
| BstMCI | CGRYCG | 1 cut(s) | 920 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 198, 389, 469, 505, 518, 881, 1477 |
| BstNI | CCWGG | 3 cut(s) | 152, 311, 1331 |
| BstNSI | RCATGY | 1 cut(s) | 1035 |
| BstSCI | CCNGG | 3 cut(s) | 150, 309, 1329 |
| BstUI | CGCG | 2 cut(s) | 65, 90 |
| BstV1I | GCAGC | 8 cut(s) | 210, 266, 376, 379, 508, 949, 1340, 1531 |
| BstX2I | RGATCY | 2 cut(s) | 364, 1308 |
| BstYI | RGATCY | 2 cut(s) | 364, 1308 |
| BstZ17I | GTATAC | 1 cut(s) | 964 |
| Bsu15I | ATCGAT | 2 cut(s) | 160, 991 |
| BsuI | GTATCC | 5 cut(s) | 141, 426, 697, 963, 1468 |
| BsuRI | GGCC | 4 cut(s) | 589, 632, 723, 1220 |
| BsuTUI | ATCGAT | 2 cut(s) | 160, 991 |
| BtsI | GCAGTG | 2 cut(s) | 661, 1529 |
| BtsIMutI | CAGTG | 3 cut(s) | 661, 1077, 1529 |
| Cac8I | GCNNGC | 5 cut(s) | 510, 853, 1222, 1351, 1478 |
| CciI | TCATGA | 1 cut(s) | 325 |
| CfoI | GCGC | 1 cut(s) | 35 |
| Cfr13I | GGNCC | 1 cut(s) | 630 |
| ClaI | ATCGAT | 2 cut(s) | 160, 991 |
| CseI | GACGC | 2 cut(s) | 71, 79 |
| Csp6I | GTAC | 1 cut(s) | 900 |
| CviAII | CATG | 6 cut(s) | 297, 326, 1032, 1040, 1162, 1387 |
| CviQI | GTAC | 1 cut(s) | 900 |
| DdeI | CTNAG | 8 cut(s) | 81, 361, 370, 893, 1107, 1260, 1299, 1305 |
| DpnI | GATC | 5 cut(s) | 144, 159, 163, 366, 1310 |
| DpnII | GATC | 5 cut(s) | 142, 157, 161, 364, 1308 |
| EaeI | YGGCCR | 1 cut(s) | 587 |
| Eam1104I | CTCTTC | 2 cut(s) | 243, 1230 |
| EarI | CTCTTC | 2 cut(s) | 243, 1230 |
| Eco147I | AGGCCT | 1 cut(s) | 1220 |
| Eco24I | GRGCYC | 1 cut(s) | 877 |
| Eco31I | GGTCTC | 1 cut(s) | 411 |
| EcoRI | GAATTC | 2 cut(s) | 41, 232 |
| EcoRII | CCWGG | 3 cut(s) | 150, 309, 1329 |
| EcoT38I | GRGCYC | 1 cut(s) | 877 |
| Esp3I | CGTCTC | 1 cut(s) | 54 |
| FaeI | CATG | 6 cut(s) | 300, 329, 1035, 1043, 1165, 1390 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1464, 1496 |
| FaqI | GGGAC | 4 cut(s) | 278, 718, 737, 898 |
| FatI | CATG | 6 cut(s) | 296, 325, 1031, 1039, 1161, 1386 |
| FauI | CCCGC | 1 cut(s) | 1321 |
| FblI | GTMKAC | 1 cut(s) | 963 |
| Fnu4HI | GCNGC | 8 cut(s) | 199, 255, 390, 393, 497, 938, 1354, 1520 |
| FriOI | GRGCYC | 1 cut(s) | 877 |
| Fsp4HI | GCNGC | 8 cut(s) | 199, 255, 390, 393, 497, 938, 1354, 1520 |
| FspBI | CTAG | 3 cut(s) | 273, 438, 1364 |
| GlaI | GCGC | 1 cut(s) | 34 |
| GluI | GCNGC | 8 cut(s) | 199, 255, 390, 393, 497, 938, 1354, 1520 |
| GsuI | CTGGAG | 1 cut(s) | 332 |
| HaeII | RGCGCY | 1 cut(s) | 36 |
| HaeIII | GGCC | 4 cut(s) | 589, 632, 723, 1220 |
| HapII | CCGG | 1 cut(s) | 267 |
| HgaI | GACGC | 2 cut(s) | 71, 79 |
| HhaI | GCGC | 1 cut(s) | 35 |
| Hin1II | CATG | 6 cut(s) | 300, 329, 1035, 1043, 1165, 1390 |
| Hin6I | GCGC | 1 cut(s) | 33 |
| HinP1I | GCGC | 1 cut(s) | 33 |
| HincII | GTYRAC | 1 cut(s) | 94 |
| HindII | GTYRAC | 1 cut(s) | 94 |
| HindIII | AAGCTT | 1 cut(s) | 1478 |
| HpaII | CCGG | 1 cut(s) | 267 |
| HphI | GGTGA | 3 cut(s) | 137, 368, 704 |
| Hpy166II | GTNNAC | 8 cut(s) | 94, 307, 376, 623, 678, 964, 976, 1257 |
| Hpy188I | TCNGA | 4 cut(s) | 72, 243, 784, 1108 |
| Hpy188III | TCNNGA | 9 cut(s) | 53, 205, 326, 407, 416, 915, 956, 977, 1498 |
| Hpy8I | GTNNAC | 8 cut(s) | 94, 307, 376, 623, 678, 964, 976, 1257 |
| Hpy99I | CGWCG | 1 cut(s) | 20 |
| HpyAV | CCTTC | 5 cut(s) | 144, 422, 470, 866, 1057 |
| HpyCH4III | ACNGT | 5 cut(s) | 380, 685, 1072, 1339, 1467 |
| HpyCH4IV | ACGT | 3 cut(s) | 283, 696, 1010 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 198, 389, 469, 505, 518, 881, 1477 |
| HpyF3I | CTNAG | 8 cut(s) | 81, 361, 370, 893, 1107, 1260, 1299, 1305 |
| HpySE526I | ACGT | 3 cut(s) | 283, 696, 1010 |
| Hsp92II | CATG | 6 cut(s) | 300, 329, 1035, 1043, 1165, 1390 |
| HspAI | GCGC | 1 cut(s) | 33 |
| Kzo9I | GATC | 5 cut(s) | 142, 157, 161, 364, 1308 |
| Lsp1109I | GCAGC | 8 cut(s) | 210, 266, 376, 379, 508, 949, 1340, 1531 |
| LweI | GCATC | 2 cut(s) | 575, 788 |
| MaeI | CTAG | 3 cut(s) | 273, 438, 1364 |
| MaeII | ACGT | 3 cut(s) | 283, 696, 1010 |
| MaeIII | GTNAC | 4 cut(s) | 578, 810, 1034, 1485 |
| MalI | GATC | 5 cut(s) | 144, 159, 163, 366, 1310 |
| MboI | GATC | 5 cut(s) | 142, 157, 161, 364, 1308 |
| MboII | GAAGA | 9 cut(s) | 50, 105, 230, 314, 603, 1055, 1247, 1276, 1403 |
| MflI | RGATCY | 2 cut(s) | 364, 1308 |
| MhlI | GDGCHC | 2 cut(s) | 514, 877 |
| MlsI | TGGCCA | 1 cut(s) | 589 |
| MluCI | AATT | 8 cut(s) | 41, 181, 232, 1046, 1054, 1212, 1445, 1492 |
| MluI | ACGCGT | 2 cut(s) | 63, 88 |
| MluNI | TGGCCA | 1 cut(s) | 589 |
| MlyI | GAGTC | 3 cut(s) | 41, 575, 818 |
| MmeI | TCCRAC | 2 cut(s) | 1173, 1530 |
| Mox20I | TGGCCA | 1 cut(s) | 589 |
| MscI | TGGCCA | 1 cut(s) | 589 |
| MseI | TTAA | 8 cut(s) | 342, 729, 789, 933, 1215, 1275, 1535, 1555 |
| MslI | CAYNNNNRTG | 2 cut(s) | 717, 981 |
| Msp20I | TGGCCA | 1 cut(s) | 589 |
| MspI | CCGG | 1 cut(s) | 267 |
| MspR9I | CCNGG | 3 cut(s) | 152, 311, 1331 |
| Mva1269I | GAATGC | 1 cut(s) | 1439 |
| MvaI | CCWGG | 3 cut(s) | 152, 311, 1331 |
| MvnI | CGCG | 2 cut(s) | 65, 90 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 198, 389, 469, 505, 518, 881, 1477 |
| NdeII | GATC | 5 cut(s) | 142, 157, 161, 364, 1308 |
| NlaIII | CATG | 6 cut(s) | 300, 329, 1035, 1043, 1165, 1390 |
| NmuCI | GTSAC | 2 cut(s) | 578, 810 |
| NspI | RCATGY | 1 cut(s) | 1035 |
| NspV | TTCGAA | 2 cut(s) | 230, 1443 |
| PagI | TCATGA | 1 cut(s) | 325 |
| PceI | AGGCCT | 1 cut(s) | 1220 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 51 |
| PctI | GAATGC | 1 cut(s) | 1439 |
| PfeI | GAWTC | 9 cut(s) | 449, 709, 766, 1078, 1244, 1267, 1292, 1394, 1507 |
| PkrI | GCNGC | 8 cut(s) | 200, 256, 391, 394, 498, 939, 1355, 1521 |
| PleI | GAGTC | 3 cut(s) | 41, 575, 817 |
| PpsI | GAGTC | 3 cut(s) | 41, 575, 817 |
| PshBI | ATTAAT | 1 cut(s) | 1275 |
| PsiI | TTATAA | 1 cut(s) | 599 |
| Psp1406I | AACGTT | 1 cut(s) | 1010 |
| Psp6I | CCWGG | 3 cut(s) | 150, 309, 1329 |
| PspGI | CCWGG | 3 cut(s) | 150, 309, 1329 |
| PspPI | GGNCC | 1 cut(s) | 630 |
| PsuI | RGATCY | 2 cut(s) | 364, 1308 |
| RsaI | GTAC | 1 cut(s) | 901 |
| RsaNI | GTAC | 1 cut(s) | 900 |
| RseI | CAYNNNNRTG | 2 cut(s) | 717, 981 |
| SaqAI | TTAA | 8 cut(s) | 342, 729, 789, 933, 1215, 1275, 1535, 1555 |
| SatI | GCNGC | 8 cut(s) | 199, 255, 390, 393, 497, 938, 1354, 1520 |
| Sau3AI | GATC | 5 cut(s) | 142, 157, 161, 364, 1308 |
| Sau96I | GGNCC | 1 cut(s) | 630 |
| SchI | GAGTC | 3 cut(s) | 41, 575, 818 |
| ScrFI | CCNGG | 3 cut(s) | 152, 311, 1331 |
| SduI | GDGCHC | 2 cut(s) | 514, 877 |
| SfaNI | GCATC | 2 cut(s) | 575, 788 |
| SfuI | TTCGAA | 2 cut(s) | 230, 1443 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 717, 981 |
| SmlI | CTYRAG | 2 cut(s) | 831, 1250 |
| SmoI | CTYRAG | 2 cut(s) | 831, 1250 |
| Sse9I | AATT | 8 cut(s) | 41, 181, 232, 1046, 1054, 1212, 1445, 1492 |
| SseBI | AGGCCT | 1 cut(s) | 1220 |
| SsiI | CCGC | 3 cut(s) | 99, 148, 1314 |
| SspI | AATATT | 1 cut(s) | 888 |
| SspMI | CTAG | 3 cut(s) | 273, 438, 1364 |
| StuI | AGGCCT | 1 cut(s) | 1220 |
| StyD4I | CCNGG | 3 cut(s) | 150, 309, 1329 |
| TaaI | ACNGT | 5 cut(s) | 380, 685, 1072, 1339, 1467 |
| TaiI | ACGT | 3 cut(s) | 286, 699, 1013 |
| TaqI | TCGA | 9 cut(s) | 45, 54, 160, 230, 415, 452, 991, 1397, 1443 |
| TaqII | GACCGA | 1 cut(s) | 934 |
| TasI | AATT | 8 cut(s) | 41, 181, 232, 1046, 1054, 1212, 1445, 1492 |
| TfiI | GAWTC | 9 cut(s) | 449, 709, 766, 1078, 1244, 1267, 1292, 1394, 1507 |
| Tru1I | TTAA | 8 cut(s) | 342, 729, 789, 933, 1215, 1275, 1535, 1555 |
| Tru9I | TTAA | 8 cut(s) | 342, 729, 789, 933, 1215, 1275, 1535, 1555 |
| TscAI | CASTG | 3 cut(s) | 661, 1077, 1529 |
| TseFI | GTSAC | 2 cut(s) | 578, 810 |
| TseI | GCWGC | 8 cut(s) | 198, 254, 389, 392, 496, 937, 1353, 1519 |
| Tsp45I | GTSAC | 2 cut(s) | 578, 810 |
| TspDTI | ATGAA | 6 cut(s) | 126, 314, 540, 1056, 1076, 1178 |
| TspRI | CASTG | 3 cut(s) | 661, 1077, 1529 |
| VspI | ATTAAT | 1 cut(s) | 1275 |
| XapI | RAATTY | 3 cut(s) | 41, 232, 1492 |
| XceI | RCATGY | 1 cut(s) | 1035 |
| XmiI | GTMKAC | 1 cut(s) | 963 |
| XspI | CTAG | 3 cut(s) | 273, 438, 1364 |