RLG00000007202

SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr2
OG0007739
Physical Location & Seq
Reverse (-)
14521523 .. 14529135
7613 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000007202

Sequence Viewer

Length: 2223 bp
ATGGATTTTGGGGCCGACGACGACGACGACTGGAATTTCAGCGCCGAAGAGCTTGATTCCCTCGAAAGAGACGCTTTCCAGAAACTCTCTCAGCAACGCATCAATTCCGCTTCCACTTGTTCTTGTTCTTCTTCTTCCTTTTCATTCAATCACCACCACCACCCACACCCACACCAGTCTTTACCCACCACCACCACCACCACCACCACCACCAATGCCTTAGAAAGCTCCATTCCGAATTCTCTTCCTAATCAGGTGCCGCGGCCGCCTTTGTCTCCTGGAGCCAGAGTATTACCTTCTTCTCTAGACGTTAAAGTAAACCCTGTTGAACGGAAGCTCACTGTCAAATTTTTTCTTCATGCTACTGGAAACATTGCTGCAAAATTTTCCTATGACCAGGCGTTGGTAGCTGCTTTCCGCAAGATCCCCAAAGCCGCATGGAATGCAAAAGAAAGGTTATGGATGTTCCCTGAGTCTTCTTTGTCATCGGCAGAAAAAGTTCTTCATGAAGTATCAGGAGTCAATGTTGAGATAGAGAACTTAGATCCCTTAGTCCACCGGGCCATTGCTGCTGTGTCTGTTGTTCCAGATATTCGAGACCTGTATGACAGGATACCTAGCTTTATTGAATCAAAGCTCTTGGGATTTCAGCGAGAAGGTGTAAGGTTTATCTTGCAGCATGGAGGGCGTGCATTCCTTGCTGATGAAATGGGACTGGGGAAGACTTTACAGGCTATTGCTGTGGCTTCCTGCATTCGTGACTCATGGCCTGTTCTTATACTCACACCATCTTCATTGCGTCTGCAATGGGCCTCTATGATTCAACAATGGATGAACATTCCTCCATCAGATATACTTGTTGTTTTGTCCCAATGTGGGGGTTCAAACAGAGCTGGATATACATTAGTATCCTCAAGTTCCAAAGGGACCATTCATCTTGATGGCCTATTTAACATAATCTCTTATGACATAGTCCCTAAACTACAGAATCTGCTGATGGCATCAGATTTTAAGATTGTGATTGCAGACGAGTCGCACTTTTTGAAAAATGCTCAAGCAAAAAGGACAACTGCTTCCCTGCCTGTCATCAAGAAGGCTCAATATGCAATACTGTTAAGTGGAACTCCTGCATTGTCCCGACCGATCGAATTATTTACGCAGCTGGAAGCCTTGTATCCTGATGTATACAAAAATGTTCATGAATATGGCAAACGATATTGCAAGGGTGGAATATTTGGAATGTATCAAGGTGCAAGTAACCATGAAGAATTGCATAATTTGTTGAAGGCAACAGTGATGATTCGGAGACTCAAAAATGATGTACTCTCTGAACTTCCTGTGAAGCGCAGACAACAGGTCTTCCTAGATTTGGCTGAAAAGGACATGAAACAAATCAATGCTTTATTCCGTGAGTTGGAGGTGGTAAAGCTGAAAATTAAGGCCTGCAAATCAAAAGAAGAAGTTGATTCACTTAAATTTATGGAGAAGAATCTTATCAATAAGATTTATACTGATTCAGCGGAGGCCAAGATCCCAGCAGTTCTGGATTACCTTGGAACTGTCATCGAGGCTGGTTGCAAGTTTCTAGTATTTGCACATCATCAATCCATGATCGATGCAATATATCAGTTTCTTCTGAAGAAGAAAGTGAGTTGTATTCGAATTGATGGCAGTATACCTACAGTAGAGAGGCAAGCATATGTTACGCAGTTTCAAGAAAAAGATTCTGTCAAGGCAGCAGTGCTATCTATCAAAGCTGGAGGTGTGGGATTAACTTTAACGGCTGCAAGCACTGTAATATTTGCAGAATTGTCGTGGACTCCTGGTGACCTAATTCAAGCTGAAGATCGTGCTCACAGAATTGGCCAGGTGTCCTCGGTCAATGTATACTACCTTCTAGCGAACGACACAGTTGATGACATCATATGGGATGTTGTTCAGAGCAAGTTGGAAAATCTGGGACAGATGCTGGATGGCCATGAGAATTCGTTGGAAGTTTCAGCCAGCCAGCCGCGAAATAGCCCGGCAAAGCAGAAAAATAGCCCTGCCAAGCAGAAAAATAGCCCTGCTAAGCAGAAAACACTGGATTCTTTCTTAAAAGTTTCAACCAACCAGTCAAACTTCAGCCCAGGAAAGCAAAAAACACTCGATTCCTTCTTGAAACGTTGCAACAACAGTGAAGACCATGAAATTGAGCCCAAATTTAAATACCCGAGGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000228 GO:0000733 GO:0003674 GO:0003676 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0031297 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031593 GO:0031974 GO:0031981 GO:0032392 GO:0033554 GO:0034641 GO:0034645 GO:0036292 GO:0036310 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048478 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070530 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090329 GO:0097159 GO:0097617 GO:0140030 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:2000104 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

741

Amino Acids

82.41

Weight (kDa)

8.58

Isoelectric Point (pI)

42.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 216 - 492 1.6e-33 SNF2-related domain
Helicase_C PF00271 514 - 622 3.4e-19 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 256
AccB7I CCANNNNNTGG 1 cut(s) 403
AccI GTMKAC 3 cut(s) 1185, 1675, 1887
AccII CGCG 2 cut(s) 262, 2014
AciI CCGC 8 cut(s) 108, 260, 262, 266, 418, 435, 1520, 2012
AclI AACGTT 1 cut(s) 2164
AclWI GGATC 3 cut(s) 418, 539, 1525
AcoI YGGCCR 3 cut(s) 263, 1864, 1975
AcsI RAATTY 7 cut(s) 34, 238, 347, 383, 1475, 1984, 2201
AcuI CTGAAG 3 cut(s) 1658, 1863, 2107
AfaI GTAC 1 cut(s) 1323
AfiI CCNNNNNNNGG 5 cut(s) 403, 876, 877, 1369, 1414
AhdI GACNNNNNGTC 1 cut(s) 1355
AjnI CCWGG 5 cut(s) 277, 396, 1822, 1866, 2128
Alw21I GWGCWC 1 cut(s) 1855
Alw26I GTCTC 4 cut(s) 63, 279, 591, 1300
AlwI GGATC 3 cut(s) 418, 539, 1525
AlwNI CAGNNNCTG 2 cut(s) 991, 1969
Ama87I CYCGRG 1 cut(s) 2212
ApeKI GCWGC 7 cut(s) 377, 410, 569, 676, 1159, 1736, 1784
ApoI RAATTY 7 cut(s) 34, 238, 347, 383, 1475, 1984, 2201
Asp700I GAANNNNTTC 1 cut(s) 498
AspLEI GCGC 2 cut(s) 44, 1347
AspS9I GGNCC 4 cut(s) 12, 561, 810, 927
AsuC2I CCSGG 2 cut(s) 560, 2024
AsuHPI GGTGA 2 cut(s) 143, 1838
AsuII TTCGAA 1 cut(s) 1660
AvaI CYCGRG 1 cut(s) 2212
AvaII GGWCC 1 cut(s) 927
BaeI ACNNNNGTAYC 2 cut(s) 891, 924
BalI TGGCCA 2 cut(s) 1866, 1977
BanI GGYRCC 1 cut(s) 256
BanII GRGCYC 1 cut(s) 2199
BarI GAAGNNNNNNTAC 2 cut(s) 1878, 1910
BbsI GAAGAC 4 cut(s) 468, 728, 1351, 2187
Bbv12I GWGCWC 1 cut(s) 1855
BbvI GCAGC 7 cut(s) 364, 397, 556, 688, 1171, 1748, 1771
BccI CCATC 6 cut(s) 796, 853, 935, 991, 1661, 1967
BceAI ACGGC 1 cut(s) 1797
BcgI CGANNNNNNTGC 4 cut(s) 1014, 1048, 1794, 1828
BciT130I CCWGG 5 cut(s) 279, 398, 1824, 1868, 2130
BciVI GTATCC 3 cut(s) 606, 919, 1185
BcnI CCSGG 2 cut(s) 560, 2024
BcoDI GTCTC 4 cut(s) 63, 279, 591, 1300
BfaI CTAG 5 cut(s) 305, 618, 1364, 1586, 1898
BfmI CTRYAG 2 cut(s) 983, 1680
BfoI RGCGCY 1 cut(s) 45
BfuI GTATCC 3 cut(s) 606, 919, 1185
BlpI GCTNAGC 1 cut(s) 2070
Bme1390I CCNGG 7 cut(s) 279, 398, 560, 1824, 1868, 2024, 2130
Bme18I GGWCC 1 cut(s) 927
BmeRI GACNNNNNGTC 1 cut(s) 1355
BmeT110I CYCGRG 1 cut(s) 2212
BmgT120I GGNCC 4 cut(s) 12, 561, 810, 927
BmiI GGNNCC 4 cut(s) 13, 258, 283, 928
BmrFI CCNGG 7 cut(s) 279, 398, 560, 1824, 1868, 2024, 2130
BmrI ACTGGG 1 cut(s) 725
BmsI GCATC 4 cut(s) 108, 1010, 1606, 1956
BmuI ACTGGG 1 cut(s) 725
BpiI GAAGAC 4 cut(s) 468, 728, 1351, 2187
BpmI CTGGAG 2 cut(s) 300, 1779
Bpu1102I GCTNAGC 1 cut(s) 2070
Bpu14I TTCGAA 1 cut(s) 1660
BpuEI CTTGAG 2 cut(s) 898, 1038
BpuMI CCSGG 2 cut(s) 560, 2024
Bsa29I ATCGAT 1 cut(s) 1614
BsaI GGTCTC 1 cut(s) 591
BsaJI CCNNGG 5 cut(s) 260, 1552, 1875, 2128, 2213
BsaXI ACNNNNNCTCC 4 cut(s) 273, 303, 510, 540
Bsc4I CCNNNNNNNGG 5 cut(s) 403, 876, 877, 1369, 1414
Bse1I ACTGG 6 cut(s) 35, 175, 370, 720, 2088, 2113
Bse3DI GCAATG 4 cut(s) 372, 564, 794, 812
BseBI CCWGG 5 cut(s) 279, 398, 1824, 1868, 2130
BseCI ATCGAT 1 cut(s) 1614
BseDI CCNNGG 5 cut(s) 260, 1552, 1875, 2128, 2213
BseGI GGATG 4 cut(s) 468, 837, 1936, 1978
BseLI CCNNNNNNNGG 5 cut(s) 403, 876, 877, 1369, 1414
BseMI GCAATG 4 cut(s) 372, 564, 794, 812
BseMII CTCAG 2 cut(s) 104, 462
BseNI ACTGG 6 cut(s) 35, 175, 370, 720, 2088, 2113
BseX3I CGGCCG 1 cut(s) 263
BseXI GCAGC 7 cut(s) 364, 397, 556, 688, 1171, 1748, 1771
BseYI CCCAGC 1 cut(s) 1534
Bsh1236I CGCG 2 cut(s) 262, 2014
Bsh1285I CGRYCG 3 cut(s) 266, 1142, 1146
BshNI GGYRCC 1 cut(s) 256
BshVI ATCGAT 1 cut(s) 1614
BsiEI CGRYCG 3 cut(s) 266, 1142, 1146
BsiHKAI GWGCWC 1 cut(s) 1855
BsiHKCI CYCGRG 1 cut(s) 2212
BsiSI CCGG 2 cut(s) 559, 2024
BslFI GGGAC 6 cut(s) 726, 853, 940, 959, 1120, 1974
BslI CCNNNNNNNGG 5 cut(s) 403, 876, 877, 1369, 1414
BsmAI GTCTC 4 cut(s) 63, 279, 591, 1300
BsmBI CGTCTC 1 cut(s) 63
BsmFI GGGAC 6 cut(s) 726, 853, 940, 959, 1120, 1974
BsmI GAATGC 3 cut(s) 448, 692, 753
Bso31I GGTCTC 1 cut(s) 591
BsoBI CYCGRG 1 cut(s) 2212
Bsp119I TTCGAA 1 cut(s) 1660
Bsp1286I GDGCHC 2 cut(s) 1855, 2199
Bsp143I GATC 6 cut(s) 423, 544, 1143, 1530, 1611, 1846
Bsp1720I GCTNAGC 1 cut(s) 2070
BspACI CCGC 8 cut(s) 108, 260, 262, 266, 418, 435, 1520, 2012
BspCNI CTCAG 2 cut(s) 103, 463
BspDI ATCGAT 1 cut(s) 1614
BspFNI CGCG 2 cut(s) 262, 2014
BspHI TCATGA 2 cut(s) 505, 1198
BspLI GGNNCC 4 cut(s) 13, 258, 283, 928
BspPI GGATC 3 cut(s) 418, 539, 1525
BspQI GCTCTTC 1 cut(s) 42
BspT104I TTCGAA 1 cut(s) 1660
BspT107I GGYRCC 1 cut(s) 256
BspTNI GGTCTC 1 cut(s) 591
BsrDI GCAATG 4 cut(s) 372, 564, 794, 812
BsrI ACTGG 6 cut(s) 35, 175, 370, 720, 2088, 2113
BssECI CCNNGG 5 cut(s) 260, 1552, 1875, 2128, 2213
BssMI GATC 6 cut(s) 423, 544, 1143, 1530, 1611, 1846
BssNAI GTATAC 3 cut(s) 1186, 1676, 1888
BssT1I CCWWGG 1 cut(s) 1552
Bst1107I GTATAC 3 cut(s) 1186, 1676, 1888
Bst2UI CCWGG 5 cut(s) 279, 398, 1824, 1868, 2130
Bst4CI ACNGT 8 cut(s) 343, 1113, 1294, 1561, 1684, 1795, 1912, 2177
Bst6I CTCTTC 2 cut(s) 42, 249
BstAPI GCANNNNNTGC 2 cut(s) 443, 698
BstBI TTCGAA 1 cut(s) 1660
BstC8I GCNNGC 6 cut(s) 690, 1444, 1695, 1789, 2005, 2009
BstDEI CTNAG 6 cut(s) 90, 220, 471, 541, 550, 2070
BstDSI CCRYGG 1 cut(s) 260
BstEII GGTNACC 1 cut(s) 1826
BstF5I GGATG 4 cut(s) 468, 837, 1936, 1978
BstFNI CGCG 2 cut(s) 262, 2014
BstH2I RGCGCY 1 cut(s) 45
BstHHI GCGC 2 cut(s) 44, 1347
BstKTI GATC 6 cut(s) 426, 547, 1146, 1533, 1614, 1849
BstMAI GTCTC 4 cut(s) 63, 279, 591, 1300
BstMBI GATC 6 cut(s) 423, 544, 1143, 1530, 1611, 1846
BstMCI CGRYCG 3 cut(s) 266, 1142, 1146
BstMWI GCNNNNNNNGC 7 cut(s) 265, 407, 443, 569, 685, 698, 1103
BstNI CCWGG 5 cut(s) 279, 398, 1824, 1868, 2130
BstPI GGTNACC 1 cut(s) 1826
BstSCI CCNGG 7 cut(s) 277, 396, 558, 1822, 1866, 2022, 2128
BstSFI CTRYAG 2 cut(s) 983, 1680
BstUI CGCG 2 cut(s) 262, 2014
BstV1I GCAGC 7 cut(s) 364, 397, 556, 688, 1171, 1748, 1771
BstV2I GAAGAC 4 cut(s) 468, 728, 1351, 2187
BstX2I RGATCY 3 cut(s) 423, 544, 1530
BstYI RGATCY 3 cut(s) 423, 544, 1530
BstZ17I GTATAC 3 cut(s) 1186, 1676, 1888
BstZI CGGCCG 1 cut(s) 263
Bsu15I ATCGAT 1 cut(s) 1614
BsuI GTATCC 3 cut(s) 606, 919, 1185
BsuTUI ATCGAT 1 cut(s) 1614
BtgI CCRYGG 1 cut(s) 260
BtsCI GGATG 4 cut(s) 468, 837, 1936, 1978
BtsI GCAGTG 1 cut(s) 1746
BtsIMutI CAGTG 6 cut(s) 339, 1299, 1746, 1791, 2081, 2182
Cac8I GCNNGC 6 cut(s) 690, 1444, 1695, 1789, 2005, 2009
CaiI CAGNNNCTG 2 cut(s) 991, 1969
CciI TCATGA 2 cut(s) 505, 1198
CciNI GCGGCCGC 1 cut(s) 263
CfoI GCGC 2 cut(s) 44, 1347
Cfr13I GGNCC 4 cut(s) 12, 561, 810, 927
Cfr42I CCGCGG 1 cut(s) 263
ClaI ATCGAT 1 cut(s) 1614
CseI GACGC 2 cut(s) 80, 788
Csp6I GTAC 1 cut(s) 1322
CviQI GTAC 1 cut(s) 1322
DdeI CTNAG 6 cut(s) 90, 220, 471, 541, 550, 2070
DpnI GATC 6 cut(s) 425, 546, 1145, 1532, 1613, 1848
DpnII GATC 6 cut(s) 423, 544, 1143, 1530, 1611, 1846
DraI TTTAAA 1 cut(s) 2206
DriI GACNNNNNGTC 1 cut(s) 1355
EaeI YGGCCR 3 cut(s) 263, 1864, 1975
EagI CGGCCG 1 cut(s) 263
Eam1104I CTCTTC 2 cut(s) 42, 249
Eam1105I GACNNNNNGTC 1 cut(s) 1355
EarI CTCTTC 2 cut(s) 42, 249
EclXI CGGCCG 1 cut(s) 263
Eco130I CCWWGG 1 cut(s) 1552
Eco147I AGGCCT 1 cut(s) 1442
Eco24I GRGCYC 1 cut(s) 2199
Eco31I GGTCTC 1 cut(s) 591
Eco47I GGWCC 1 cut(s) 927
Eco52I CGGCCG 1 cut(s) 263
Eco57I CTGAAG 3 cut(s) 1658, 1863, 2107
Eco88I CYCGRG 1 cut(s) 2212
Eco91I GGTNACC 1 cut(s) 1826
EcoO65I GGTNACC 1 cut(s) 1826
EcoRI GAATTC 2 cut(s) 238, 1984
EcoRII CCWGG 5 cut(s) 277, 396, 1822, 1866, 2128
EcoT14I CCWWGG 1 cut(s) 1552
EcoT38I GRGCYC 1 cut(s) 2199
ErhI CCWWGG 1 cut(s) 1552
Esp3I CGTCTC 1 cut(s) 63
FalI AAGNNNNNCTT 2 cut(s) 58, 90
FaqI GGGAC 6 cut(s) 726, 853, 940, 959, 1120, 1974
FauNDI CATATG 2 cut(s) 1699, 1925
FblI GTMKAC 3 cut(s) 1185, 1675, 1887
FokI GGATG 4 cut(s) 475, 844, 1943, 1985
FriOI GRGCYC 1 cut(s) 2199
FspBI CTAG 5 cut(s) 305, 618, 1364, 1586, 1898
GlaI GCGC 2 cut(s) 43, 1346
GsaI CCCAGC 1 cut(s) 1538
GsuI CTGGAG 2 cut(s) 300, 1779
HaeII RGCGCY 1 cut(s) 45
HapII CCGG 2 cut(s) 559, 2024
HgaI GACGC 2 cut(s) 80, 788
HhaI GCGC 2 cut(s) 44, 1347
Hin6I GCGC 2 cut(s) 42, 1345
HinP1I GCGC 2 cut(s) 42, 1345
HpaII CCGG 2 cut(s) 559, 2024
HphI GGTGA 2 cut(s) 143, 1838
Hpy166II GTNNAC 6 cut(s) 319, 556, 1186, 1676, 1818, 1888
Hpy188I TCNGA 7 cut(s) 237, 850, 1006, 1305, 1330, 1638, 1941
Hpy8I GTNNAC 6 cut(s) 319, 556, 1186, 1676, 1818, 1888
Hpy99I CGWCG 4 cut(s) 20, 23, 26, 29
HpyAV CCTTC 6 cut(s) 306, 650, 1087, 1279, 1904, 2164
HpyCH4III ACNGT 8 cut(s) 343, 1113, 1294, 1561, 1684, 1795, 1912, 2177
HpyCH4IV ACGT 2 cut(s) 309, 2164
HpyF10VI GCNNNNNNNGC 7 cut(s) 265, 407, 443, 569, 685, 698, 1103
HpyF3I CTNAG 6 cut(s) 90, 220, 471, 541, 550, 2070
HpySE526I ACGT 2 cut(s) 309, 2164
HspAI GCGC 2 cut(s) 42, 1345
KspI CCGCGG 1 cut(s) 263
Kzo9I GATC 6 cut(s) 423, 544, 1143, 1530, 1611, 1846
LguI GCTCTTC 1 cut(s) 42
LmnI GCTCC 2 cut(s) 233, 281
Lsp1109I GCAGC 7 cut(s) 364, 397, 556, 688, 1171, 1748, 1771
LweI GCATC 4 cut(s) 108, 1010, 1606, 1956
MaeI CTAG 5 cut(s) 305, 618, 1364, 1586, 1898
MaeII ACGT 2 cut(s) 309, 2164
MaeIII GTNAC 4 cut(s) 758, 1256, 1702, 1826
MalI GATC 6 cut(s) 425, 546, 1145, 1532, 1613, 1848
MboI GATC 6 cut(s) 423, 544, 1143, 1530, 1611, 1846
MflI RGATCY 3 cut(s) 423, 544, 1530
MhlI GDGCHC 2 cut(s) 1855, 2199
MlsI TGGCCA 2 cut(s) 1866, 1977
MluNI TGGCCA 2 cut(s) 1866, 1977
MlyI GAGTC 6 cut(s) 482, 528, 755, 1040, 1302, 1813
MmeI TCCRAC 3 cut(s) 1395, 1929, 1971
Mox20I TGGCCA 2 cut(s) 1866, 1977
MroXI GAANNNNTTC 1 cut(s) 498
MscI TGGCCA 2 cut(s) 1866, 1977
MslI CAYNNNNRTG 2 cut(s) 939, 1203
Msp20I TGGCCA 2 cut(s) 1866, 1977
MspA1I CMGCKG 3 cut(s) 262, 1162, 1520
MspI CCGG 2 cut(s) 559, 2024
MspR9I CCNGG 7 cut(s) 279, 398, 560, 1824, 1868, 2024, 2130
Mva1269I GAATGC 3 cut(s) 448, 692, 753
MvaI CCWGG 5 cut(s) 279, 398, 1824, 1868, 2130
MvnI CGCG 2 cut(s) 262, 2014
MwoI GCNNNNNNNGC 7 cut(s) 265, 407, 443, 569, 685, 698, 1103
NciI CCSGG 2 cut(s) 560, 2024
NdeI CATATG 2 cut(s) 1699, 1925
NdeII GATC 6 cut(s) 423, 544, 1143, 1530, 1611, 1846
NlaIV GGNNCC 4 cut(s) 13, 258, 283, 928
NmuCI GTSAC 2 cut(s) 758, 1826
NotI GCGGCCGC 1 cut(s) 263
NspV TTCGAA 1 cut(s) 1660
PagI TCATGA 2 cut(s) 505, 1198
PceI AGGCCT 1 cut(s) 1442
PciSI GCTCTTC 1 cut(s) 42
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PctI GAATGC 3 cut(s) 448, 692, 753
PdmI GAANNNNTTC 1 cut(s) 498
PflFI GACNNNGTC 1 cut(s) 971
PflMI CCANNNNNTGG 1 cut(s) 403
PfoI TCCNGGA 1 cut(s) 277
Ple19I CGATCG 1 cut(s) 1146
PleI GAGTC 6 cut(s) 481, 527, 755, 1039, 1302, 1813
PpsI GAGTC 6 cut(s) 481, 527, 755, 1039, 1302, 1813
Psp1406I AACGTT 1 cut(s) 2164
Psp6I CCWGG 5 cut(s) 277, 396, 1822, 1866, 2128
PspEI GGTNACC 1 cut(s) 1826
PspFI CCCAGC 1 cut(s) 1534
PspGI CCWGG 5 cut(s) 277, 396, 1822, 1866, 2128
PspN4I GGNNCC 4 cut(s) 13, 258, 283, 928
PspPI GGNCC 4 cut(s) 12, 561, 810, 927
PstNI CAGNNNCTG 2 cut(s) 991, 1969
PsuI RGATCY 3 cut(s) 423, 544, 1530
PsyI GACNNNGTC 1 cut(s) 971
PvuI CGATCG 1 cut(s) 1146
PvuII CAGCTG 1 cut(s) 1162
RsaI GTAC 1 cut(s) 1323
RsaNI GTAC 1 cut(s) 1322
RseI CAYNNNNRTG 2 cut(s) 939, 1203
SacII CCGCGG 1 cut(s) 263
SapI GCTCTTC 1 cut(s) 42
Sau3AI GATC 6 cut(s) 423, 544, 1143, 1530, 1611, 1846
Sau96I GGNCC 4 cut(s) 12, 561, 810, 927
SchI GAGTC 6 cut(s) 482, 528, 755, 1040, 1302, 1813
ScrFI CCNGG 7 cut(s) 279, 398, 560, 1824, 1868, 2024, 2130
SduI GDGCHC 2 cut(s) 1855, 2199
SfaNI GCATC 4 cut(s) 108, 1010, 1606, 1956
SfcI CTRYAG 2 cut(s) 983, 1680
Sfr303I CCGCGG 1 cut(s) 263
SfuI TTCGAA 1 cut(s) 1660
SgrBI CCGCGG 1 cut(s) 263
SinI GGWCC 1 cut(s) 927
SmiI ATTTAAAT 1 cut(s) 2206
SmiMI CAYNNNNRTG 2 cut(s) 939, 1203
SmlI CTYRAG 2 cut(s) 913, 1053
SmoI CTYRAG 2 cut(s) 913, 1053
SseBI AGGCCT 1 cut(s) 1442
SsiI CCGC 8 cut(s) 108, 260, 262, 266, 418, 435, 1520, 2012
SspI AATATT 2 cut(s) 1233, 1800
SspMI CTAG 5 cut(s) 305, 618, 1364, 1586, 1898
StuI AGGCCT 1 cut(s) 1442
StyD4I CCNGG 7 cut(s) 277, 396, 558, 1822, 1866, 2022, 2128
StyI CCWWGG 1 cut(s) 1552
SwaI ATTTAAAT 1 cut(s) 2206
TaaI ACNGT 8 cut(s) 343, 1113, 1294, 1561, 1684, 1795, 1912, 2177
TaiI ACGT 2 cut(s) 312, 2167
TaqI TCGA 7 cut(s) 63, 595, 1146, 1566, 1614, 1660, 2148
TaqII GACCGA 2 cut(s) 1156, 1867
TatI WGTACW 1 cut(s) 1321
TauI GCSGC 5 cut(s) 262, 265, 268, 437, 2014
TscAI CASTG 6 cut(s) 346, 1299, 1746, 1798, 2088, 2182
TseFI GTSAC 2 cut(s) 758, 1826
TseI GCWGC 7 cut(s) 377, 410, 569, 676, 1159, 1736, 1784
Tsp45I GTSAC 2 cut(s) 758, 1826
TspGWI ACGGA 2 cut(s) 346, 1397
TspRI CASTG 6 cut(s) 346, 1299, 1746, 1798, 2088, 2182
Tth111I GACNNNGTC 1 cut(s) 971
Van91I CCANNNNNTGG 1 cut(s) 403
VpaK11BI GGWCC 1 cut(s) 927
XapI RAATTY 7 cut(s) 34, 238, 347, 383, 1475, 1984, 2201
XbaI TCTAGA 1 cut(s) 304
XmiI GTMKAC 3 cut(s) 1185, 1675, 1887
XmnI GAANNNNTTC 1 cut(s) 498
XspI CTAG 5 cut(s) 305, 618, 1364, 1586, 1898
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.