Rmu_sc0009221.1_g000001

SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009221.1
OG0007739
Physical Location & Seq
Forward (+)
1016 .. 8583
7568 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009221.1_g000001.1.cds

Sequence Viewer

Length: 2205 bp
atggattttggggccgacgacgactggaatttcagcgcggaagagcttgattccctcgaaagagacgctttccagaaactctctcagcaacgcatcaactccgcttccacttgttcctgttctgcttcttcttcttcttcttcttccttttcattcaatcgccaccacccacaccagtcgtctttacccaccaccagcaatgccttcgaaagcttcattccgaattctcttcctagccaggtgccgccgcctttgtctcctggagccagagttttaccttcttctctagacgttaaagtaaaccctgttgaacagaagctcactgtcaaattttttcttcacgctactggaaacattgctgcaaaattttcctatgaccaggcgttggtagctgctttccgcaagatccccaaagccacatggaatgcaaaagaaaggttatggatgttccctgtgtcttctttgtcatcggcagaaaaagttcttcatgaagtatcaggagtcaatgttgagatagagaacttagatcccttagtccaccgggccattgctgctgtgtctgttgttccagatattcgagacctgtatgacaggatacctagctttattgaatcaaagctcttgggatttcagcgagaaggtgtaaggtttatcttgcagcatggagggcgtgcattccttgctgatgaaatgggactggggaagactttacaggctattgctgtggcttcctgcattcgtgactcatggcctgttcttatactcacaccatcttcattgcgtctgcaatgggcctctatgattcaacaatggatgaacattcctccatcagatattagtgttgttttgtctcaatgtgggggttcaaacagagctggatatacattagtatcctcaagttccaaagggaccattcatcttgatggcctatttaacataatctcttatgacatagtccctaaactacggaatctgctgatggcatcagattttaagattgtgattgcagatgagtcgcactttttgaaaaatgctcaagcaaaaaggacaactgcttccctgcctgtcatcaagaaagctcaatatgcaatactgttaagtggaactcctgcattgtcccgaccaatcgaactatttacgcagctggaagccttgtatcctgatgtatacaaaaatgttcatgaatatggcaaacgatattgcaagggtggaacatttggaatgtatcaaggtgcaagtaaccatgaagaattgcataatttgttgaaggcaacagtgatgattcggagactcaaaaatgatgtactctctgaacttcctgtgaagcgcagacaacaggtcttcctagatttggctgaaaaggacatgaaacaaatcaatgctttatttcgtgagttggaggtggtaaagctgaaaattaaggcctgcaaatcaaaagaagaagttgattcacttaaatttatggagaagaatcttatcaataagatttatactgattcagcggaggccaagatcccagcagttctggattacctgggaactgtcatcgaggctggttgcaagtttctagtatttgcacatcatcaatccatgatcgatgcaatatatcagtttcttctgaagaagaaagtgagttgtattcgaattgatggcagtatacctacagtacagaggcaagcatatgttacgcagtttcaagaaaaagattctgtcaaggcagcagtgctatctatcaaagccggaggtgtgggattaactttaacagctgcaagcactgtaatatttgcagaattgtcgtggactcctggtgacctaattcaagctgaagatcgtgctcacagaattggccaggtgtcctcggtcaatgtatactaccttctagcgaacgacacagttgatgacatcatatgggatgttgttcagagcaagttggaaaatctgggacagatgctggatggccatgagaattcgttggaagtttcagccagccagccgcgaaatagccctgcaaagccgaaaaatagccctggcaagccgaaatatagccctgcaaagcagaaaacactggattctttcttgaaagtttcaaccaaccagtcaaacatcagcccaggaaagcaaaaaacacttgattccttcttgaagcgttgcaacaacagtgaagaccatgaaattgagcccaaatttaaatacccaaggcagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000228 GO:0000733 GO:0003674 GO:0003676 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0031297 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031593 GO:0031974 GO:0031981 GO:0032392 GO:0033554 GO:0034641 GO:0034645 GO:0036292 GO:0036310 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048478 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070530 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090329 GO:0097159 GO:0097617 GO:0140030 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:2000104 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

734

Amino Acids

81.52

Weight (kDa)

8.88

Isoelectric Point (pI)

44.52

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 241
AccB7I CCANNNNNTGG 1 cut(s) 385
AccI GTMKAC 3 cut(s) 1167, 1657, 1869
AccII CGCG 2 cut(s) 38, 1996
AciI CCGC 7 cut(s) 38, 102, 245, 248, 400, 1502, 1994
AclWI GGATC 3 cut(s) 400, 521, 1507
AcoI YGGCCR 2 cut(s) 1846, 1957
AcsI RAATTY 7 cut(s) 28, 223, 329, 365, 1457, 1966, 2183
AcuI CTGAAG 2 cut(s) 1640, 1845
AfaI GTAC 2 cut(s) 1305, 1668
AfiI CCNNNNNNNGG 2 cut(s) 385, 1351
AhdI GACNNNNNGTC 1 cut(s) 1337
AjnI CCWGG 8 cut(s) 237, 259, 378, 1533, 1804, 1848, 2026, 2110
Alw21I GWGCWC 1 cut(s) 1837
Alw26I GTCTC 5 cut(s) 57, 261, 573, 855, 1282
AlwI GGATC 3 cut(s) 400, 521, 1507
AlwNI CAGNNNCTG 1 cut(s) 1951
AoxI GGCC 9 cut(s) 12, 543, 749, 792, 925, 1422, 1506, 1846, 1957
ApeKI GCWGC 7 cut(s) 359, 392, 551, 658, 1141, 1718, 1766
ApoI RAATTY 7 cut(s) 28, 223, 329, 365, 1457, 1966, 2183
Asp700I GAANNNNTTC 1 cut(s) 480
AspLEI GCGC 2 cut(s) 38, 1329
AspS9I GGNCC 4 cut(s) 12, 543, 792, 909
AsuC2I CCSGG 1 cut(s) 542
AsuHPI GGTGA 1 cut(s) 1820
AsuII TTCGAA 2 cut(s) 207, 1642
AvaII GGWCC 1 cut(s) 909
BaeI ACNNNNGTAYC 2 cut(s) 873, 906
BalI TGGCCA 2 cut(s) 1848, 1959
BanI GGYRCC 1 cut(s) 241
BanII GRGCYC 1 cut(s) 2181
BarI GAAGNNNNNNTAC 2 cut(s) 1860, 1892
BbsI GAAGAC 4 cut(s) 450, 710, 1333, 2169
Bbv12I GWGCWC 1 cut(s) 1837
BbvI GCAGC 7 cut(s) 346, 379, 538, 670, 1153, 1730, 1753
BccI CCATC 6 cut(s) 778, 835, 917, 973, 1643, 1949
BcgI CGANNNNNNTGC 6 cut(s) 187, 221, 996, 1030, 1776, 1810
BciT130I CCWGG 8 cut(s) 239, 261, 380, 1535, 1806, 1850, 2028, 2112
BciVI GTATCC 3 cut(s) 588, 901, 1167
BcnI CCSGG 1 cut(s) 542
BcoDI GTCTC 5 cut(s) 57, 261, 573, 855, 1282
BfaI CTAG 6 cut(s) 234, 287, 600, 1346, 1568, 1880
BfmI CTRYAG 1 cut(s) 1662
BfuI GTATCC 3 cut(s) 588, 901, 1167
Bme1390I CCNGG 9 cut(s) 239, 261, 380, 542, 1535, 1806, 1850, 2028, 2112
Bme18I GGWCC 1 cut(s) 909
BmeRI GACNNNNNGTC 1 cut(s) 1337
BmgT120I GGNCC 4 cut(s) 12, 543, 792, 909
BmiI GGNNCC 4 cut(s) 13, 243, 265, 910
BmrFI CCNGG 9 cut(s) 239, 261, 380, 542, 1535, 1806, 1850, 2028, 2112
BmrI ACTGGG 1 cut(s) 707
BmsI GCATC 4 cut(s) 102, 992, 1588, 1938
BmuI ACTGGG 1 cut(s) 707
BpiI GAAGAC 4 cut(s) 450, 710, 1333, 2169
BpmI CTGGAG 1 cut(s) 282
Bpu14I TTCGAA 2 cut(s) 207, 1642
BpuEI CTTGAG 2 cut(s) 880, 1020
BpuMI CCSGG 1 cut(s) 542
Bsa29I ATCGAT 1 cut(s) 1596
BsaI GGTCTC 1 cut(s) 573
BsaJI CCNNGG 5 cut(s) 1534, 1857, 2026, 2110, 2195
BsaXI ACNNNNNCTCC 4 cut(s) 255, 285, 492, 522
Bsc4I CCNNNNNNNGG 2 cut(s) 385, 1351
Bse1I ACTGG 6 cut(s) 29, 175, 352, 702, 2070, 2095
Bse3DI GCAATG 5 cut(s) 205, 354, 546, 776, 794
BseBI CCWGG 8 cut(s) 239, 261, 380, 1535, 1806, 1850, 2028, 2112
BseCI ATCGAT 1 cut(s) 1596
BseDI CCNNGG 5 cut(s) 1534, 1857, 2026, 2110, 2195
BseGI GGATG 4 cut(s) 450, 819, 1918, 1960
BseLI CCNNNNNNNGG 2 cut(s) 385, 1351
BseMI GCAATG 5 cut(s) 205, 354, 546, 776, 794
BseMII CTCAG 1 cut(s) 98
BseNI ACTGG 6 cut(s) 29, 175, 352, 702, 2070, 2095
BseXI GCAGC 7 cut(s) 346, 379, 538, 670, 1153, 1730, 1753
BseYI CCCAGC 1 cut(s) 1516
Bsh1236I CGCG 2 cut(s) 38, 1996
BshFI GGCC 9 cut(s) 14, 545, 751, 794, 927, 1424, 1508, 1848, 1959
BshNI GGYRCC 1 cut(s) 241
BshVI ATCGAT 1 cut(s) 1596
BsiHKAI GWGCWC 1 cut(s) 1837
BsiSI CCGG 2 cut(s) 541, 1740
BslFI GGGAC 5 cut(s) 708, 922, 941, 1102, 1956
BslI CCNNNNNNNGG 2 cut(s) 385, 1351
BsmAI GTCTC 5 cut(s) 57, 261, 573, 855, 1282
BsmBI CGTCTC 1 cut(s) 57
BsmFI GGGAC 5 cut(s) 708, 922, 941, 1102, 1956
BsmI GAATGC 3 cut(s) 430, 674, 735
BsnI GGCC 9 cut(s) 14, 545, 751, 794, 927, 1424, 1508, 1848, 1959
Bso31I GGTCTC 1 cut(s) 573
Bsp119I TTCGAA 2 cut(s) 207, 1642
Bsp1286I GDGCHC 2 cut(s) 1837, 2181
Bsp143I GATC 5 cut(s) 405, 526, 1512, 1593, 1828
BspACI CCGC 7 cut(s) 38, 102, 245, 248, 400, 1502, 1994
BspANI GGCC 9 cut(s) 14, 545, 751, 794, 927, 1424, 1508, 1848, 1959
BspCNI CTCAG 1 cut(s) 97
BspDI ATCGAT 1 cut(s) 1596
BspFNI CGCG 2 cut(s) 38, 1996
BspHI TCATGA 2 cut(s) 487, 1180
BspLI GGNNCC 4 cut(s) 13, 243, 265, 910
BspPI GGATC 3 cut(s) 400, 521, 1507
BspQI GCTCTTC 1 cut(s) 36
BspT104I TTCGAA 2 cut(s) 207, 1642
BspT107I GGYRCC 1 cut(s) 241
BspTNI GGTCTC 1 cut(s) 573
BsrDI GCAATG 5 cut(s) 205, 354, 546, 776, 794
BsrI ACTGG 6 cut(s) 29, 175, 352, 702, 2070, 2095
BssECI CCNNGG 5 cut(s) 1534, 1857, 2026, 2110, 2195
BssMI GATC 5 cut(s) 405, 526, 1512, 1593, 1828
BssNAI GTATAC 3 cut(s) 1168, 1658, 1870
BssT1I CCWWGG 1 cut(s) 2195
Bst1107I GTATAC 3 cut(s) 1168, 1658, 1870
Bst2UI CCWGG 8 cut(s) 239, 261, 380, 1535, 1806, 1850, 2028, 2112
Bst4CI ACNGT 8 cut(s) 325, 1095, 1276, 1543, 1666, 1777, 1894, 2159
Bst6I CTCTTC 2 cut(s) 36, 234
BstAPI GCANNNNNTGC 1 cut(s) 680
BstBI TTCGAA 2 cut(s) 207, 1642
BstC8I GCNNGC 7 cut(s) 672, 1426, 1677, 1771, 1987, 1991, 2033
BstDEI CTNAG 3 cut(s) 84, 523, 532
BstEII GGTNACC 1 cut(s) 1808
BstF5I GGATG 4 cut(s) 450, 819, 1918, 1960
BstFNI CGCG 2 cut(s) 38, 1996
BstHHI GCGC 2 cut(s) 38, 1329
BstKTI GATC 5 cut(s) 408, 529, 1515, 1596, 1831
BstMAI GTCTC 5 cut(s) 57, 261, 573, 855, 1282
BstMBI GATC 5 cut(s) 405, 526, 1512, 1593, 1828
BstMWI GCNNNNNNNGC 5 cut(s) 389, 551, 667, 680, 1085
BstNI CCWGG 8 cut(s) 239, 261, 380, 1535, 1806, 1850, 2028, 2112
BstPI GGTNACC 1 cut(s) 1808
BstSCI CCNGG 9 cut(s) 237, 259, 378, 540, 1533, 1804, 1848, 2026, 2110
BstSFI CTRYAG 1 cut(s) 1662
BstUI CGCG 2 cut(s) 38, 1996
BstV1I GCAGC 7 cut(s) 346, 379, 538, 670, 1153, 1730, 1753
BstV2I GAAGAC 4 cut(s) 450, 710, 1333, 2169
BstX2I RGATCY 3 cut(s) 405, 526, 1512
BstYI RGATCY 3 cut(s) 405, 526, 1512
BstZ17I GTATAC 3 cut(s) 1168, 1658, 1870
Bsu15I ATCGAT 1 cut(s) 1596
BsuI GTATCC 3 cut(s) 588, 901, 1167
BsuRI GGCC 9 cut(s) 14, 545, 751, 794, 927, 1424, 1508, 1848, 1959
BsuTUI ATCGAT 1 cut(s) 1596
BtsCI GGATG 4 cut(s) 450, 819, 1918, 1960
BtsI GCAGTG 1 cut(s) 1728
BtsIMutI CAGTG 6 cut(s) 321, 1281, 1728, 1773, 2063, 2164
Cac8I GCNNGC 7 cut(s) 672, 1426, 1677, 1771, 1987, 1991, 2033
CaiI CAGNNNCTG 1 cut(s) 1951
CciI TCATGA 2 cut(s) 487, 1180
CfoI GCGC 2 cut(s) 38, 1329
Cfr13I GGNCC 4 cut(s) 12, 543, 792, 909
ClaI ATCGAT 1 cut(s) 1596
CseI GACGC 2 cut(s) 74, 770
Csp6I GTAC 2 cut(s) 1304, 1667
CviQI GTAC 2 cut(s) 1304, 1667
DdeI CTNAG 3 cut(s) 84, 523, 532
DpnI GATC 5 cut(s) 407, 528, 1514, 1595, 1830
DpnII GATC 5 cut(s) 405, 526, 1512, 1593, 1828
DraI TTTAAA 1 cut(s) 2188
DriI GACNNNNNGTC 1 cut(s) 1337
EaeI YGGCCR 2 cut(s) 1846, 1957
Eam1104I CTCTTC 2 cut(s) 36, 234
Eam1105I GACNNNNNGTC 1 cut(s) 1337
EarI CTCTTC 2 cut(s) 36, 234
Eco130I CCWWGG 1 cut(s) 2195
Eco147I AGGCCT 1 cut(s) 1424
Eco24I GRGCYC 1 cut(s) 2181
Eco31I GGTCTC 1 cut(s) 573
Eco47I GGWCC 1 cut(s) 909
Eco57I CTGAAG 2 cut(s) 1640, 1845
Eco91I GGTNACC 1 cut(s) 1808
EcoO65I GGTNACC 1 cut(s) 1808
EcoRI GAATTC 2 cut(s) 223, 1966
EcoRII CCWGG 8 cut(s) 237, 259, 378, 1533, 1804, 1848, 2026, 2110
EcoT14I CCWWGG 1 cut(s) 2195
EcoT38I GRGCYC 1 cut(s) 2181
ErhI CCWWGG 1 cut(s) 2195
Esp3I CGTCTC 1 cut(s) 57
FalI AAGNNNNNCTT 2 cut(s) 52, 84
FaqI GGGAC 5 cut(s) 708, 922, 941, 1102, 1956
FauNDI CATATG 2 cut(s) 1681, 1907
FblI GTMKAC 3 cut(s) 1167, 1657, 1869
FokI GGATG 4 cut(s) 457, 826, 1925, 1967
FriOI GRGCYC 1 cut(s) 2181
FspBI CTAG 6 cut(s) 234, 287, 600, 1346, 1568, 1880
GlaI GCGC 2 cut(s) 37, 1328
GsaI CCCAGC 1 cut(s) 1520
GsuI CTGGAG 1 cut(s) 282
HaeIII GGCC 9 cut(s) 14, 545, 751, 794, 927, 1424, 1508, 1848, 1959
HapII CCGG 2 cut(s) 541, 1740
HgaI GACGC 2 cut(s) 74, 770
HhaI GCGC 2 cut(s) 38, 1329
Hin6I GCGC 2 cut(s) 36, 1327
HinP1I GCGC 2 cut(s) 36, 1327
HindIII AAGCTT 1 cut(s) 211
HpaII CCGG 2 cut(s) 541, 1740
HphI GGTGA 1 cut(s) 1820
Hpy166II GTNNAC 6 cut(s) 301, 538, 1168, 1658, 1800, 1870
Hpy188I TCNGA 7 cut(s) 222, 832, 988, 1287, 1312, 1620, 1923
Hpy8I GTNNAC 6 cut(s) 301, 538, 1168, 1658, 1800, 1870
Hpy99I CGWCG 2 cut(s) 20, 23
HpyAV CCTTC 6 cut(s) 214, 288, 632, 1261, 1886, 2146
HpyCH4III ACNGT 8 cut(s) 325, 1095, 1276, 1543, 1666, 1777, 1894, 2159
HpyCH4IV ACGT 1 cut(s) 291
HpyF10VI GCNNNNNNNGC 5 cut(s) 389, 551, 667, 680, 1085
HpyF3I CTNAG 3 cut(s) 84, 523, 532
HpySE526I ACGT 1 cut(s) 291
HspAI GCGC 2 cut(s) 36, 1327
Kzo9I GATC 5 cut(s) 405, 526, 1512, 1593, 1828
LguI GCTCTTC 1 cut(s) 36
LmnI GCTCC 1 cut(s) 263
Lsp1109I GCAGC 7 cut(s) 346, 379, 538, 670, 1153, 1730, 1753
LweI GCATC 4 cut(s) 102, 992, 1588, 1938
MaeI CTAG 6 cut(s) 234, 287, 600, 1346, 1568, 1880
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 4 cut(s) 740, 1238, 1684, 1808
MalI GATC 5 cut(s) 407, 528, 1514, 1595, 1830
MboI GATC 5 cut(s) 405, 526, 1512, 1593, 1828
MflI RGATCY 3 cut(s) 405, 526, 1512
MhlI GDGCHC 2 cut(s) 1837, 2181
MlsI TGGCCA 2 cut(s) 1848, 1959
MluNI TGGCCA 2 cut(s) 1848, 1959
MlyI GAGTC 5 cut(s) 510, 737, 1022, 1284, 1795
MmeI TCCRAC 3 cut(s) 1377, 1911, 1953
Mox20I TGGCCA 2 cut(s) 1848, 1959
MroXI GAANNNNTTC 1 cut(s) 480
MscI TGGCCA 2 cut(s) 1848, 1959
MseI TTAA 9 cut(s) 294, 933, 993, 1097, 1419, 1455, 1754, 1760, 2187
MslI CAYNNNNRTG 2 cut(s) 921, 1185
Msp20I TGGCCA 2 cut(s) 1848, 1959
MspA1I CMGCKG 3 cut(s) 1144, 1502, 1766
MspI CCGG 2 cut(s) 541, 1740
MspR9I CCNGG 9 cut(s) 239, 261, 380, 542, 1535, 1806, 1850, 2028, 2112
Mva1269I GAATGC 3 cut(s) 430, 674, 735
MvaI CCWGG 8 cut(s) 239, 261, 380, 1535, 1806, 1850, 2028, 2112
MvnI CGCG 2 cut(s) 38, 1996
MwoI GCNNNNNNNGC 5 cut(s) 389, 551, 667, 680, 1085
NciI CCSGG 1 cut(s) 542
NdeI CATATG 2 cut(s) 1681, 1907
NdeII GATC 5 cut(s) 405, 526, 1512, 1593, 1828
NlaIV GGNNCC 4 cut(s) 13, 243, 265, 910
NmuCI GTSAC 2 cut(s) 740, 1808
NspV TTCGAA 2 cut(s) 207, 1642
PagI TCATGA 2 cut(s) 487, 1180
PceI AGGCCT 1 cut(s) 1424
PciSI GCTCTTC 1 cut(s) 36
PctI GAATGC 3 cut(s) 430, 674, 735
PdmI GAANNNNTTC 1 cut(s) 480
PflFI GACNNNGTC 1 cut(s) 953
PflMI CCANNNNNTGG 1 cut(s) 385
PfoI TCCNGGA 1 cut(s) 259
PleI GAGTC 5 cut(s) 509, 737, 1021, 1284, 1795
PpsI GAGTC 5 cut(s) 509, 737, 1021, 1284, 1795
Psp6I CCWGG 8 cut(s) 237, 259, 378, 1533, 1804, 1848, 2026, 2110
PspEI GGTNACC 1 cut(s) 1808
PspFI CCCAGC 1 cut(s) 1516
PspGI CCWGG 8 cut(s) 237, 259, 378, 1533, 1804, 1848, 2026, 2110
PspN4I GGNNCC 4 cut(s) 13, 243, 265, 910
PspPI GGNCC 4 cut(s) 12, 543, 792, 909
PstNI CAGNNNCTG 1 cut(s) 1951
PsuI RGATCY 3 cut(s) 405, 526, 1512
PsyI GACNNNGTC 1 cut(s) 953
PvuII CAGCTG 2 cut(s) 1144, 1766
RsaI GTAC 2 cut(s) 1305, 1668
RsaNI GTAC 2 cut(s) 1304, 1667
RseI CAYNNNNRTG 2 cut(s) 921, 1185
SapI GCTCTTC 1 cut(s) 36
SaqAI TTAA 9 cut(s) 294, 933, 993, 1097, 1419, 1455, 1754, 1760, 2187
Sau3AI GATC 5 cut(s) 405, 526, 1512, 1593, 1828
Sau96I GGNCC 4 cut(s) 12, 543, 792, 909
SchI GAGTC 5 cut(s) 510, 737, 1022, 1284, 1795
ScrFI CCNGG 9 cut(s) 239, 261, 380, 542, 1535, 1806, 1850, 2028, 2112
SduI GDGCHC 2 cut(s) 1837, 2181
SfaNI GCATC 4 cut(s) 102, 992, 1588, 1938
SfcI CTRYAG 1 cut(s) 1662
SfuI TTCGAA 2 cut(s) 207, 1642
SinI GGWCC 1 cut(s) 909
SmiI ATTTAAAT 1 cut(s) 2188
SmiMI CAYNNNNRTG 2 cut(s) 921, 1185
SmlI CTYRAG 2 cut(s) 895, 1035
SmoI CTYRAG 2 cut(s) 895, 1035
SseBI AGGCCT 1 cut(s) 1424
SsiI CCGC 7 cut(s) 38, 102, 245, 248, 400, 1502, 1994
SspI AATATT 1 cut(s) 1782
SspMI CTAG 6 cut(s) 234, 287, 600, 1346, 1568, 1880
StuI AGGCCT 1 cut(s) 1424
StyD4I CCNGG 9 cut(s) 237, 259, 378, 540, 1533, 1804, 1848, 2026, 2110
StyI CCWWGG 1 cut(s) 2195
SwaI ATTTAAAT 1 cut(s) 2188
TaaI ACNGT 8 cut(s) 325, 1095, 1276, 1543, 1666, 1777, 1894, 2159
TaiI ACGT 1 cut(s) 294
TaqI TCGA 7 cut(s) 57, 207, 577, 1128, 1548, 1596, 1642
TaqII GACCGA 1 cut(s) 1849
TatI WGTACW 2 cut(s) 1303, 1666
TauI GCSGC 3 cut(s) 247, 250, 1996
Tru1I TTAA 9 cut(s) 294, 933, 993, 1097, 1419, 1455, 1754, 1760, 2187
Tru9I TTAA 9 cut(s) 294, 933, 993, 1097, 1419, 1455, 1754, 1760, 2187
TscAI CASTG 6 cut(s) 328, 1281, 1728, 1780, 2070, 2164
TseFI GTSAC 2 cut(s) 740, 1808
TseI GCWGC 7 cut(s) 359, 392, 551, 658, 1141, 1718, 1766
Tsp45I GTSAC 2 cut(s) 740, 1808
TspGWI ACGGA 1 cut(s) 982
TspRI CASTG 6 cut(s) 328, 1281, 1728, 1780, 2070, 2164
Tth111I GACNNNGTC 1 cut(s) 953
Van91I CCANNNNNTGG 1 cut(s) 385
VpaK11BI GGWCC 1 cut(s) 909
XapI RAATTY 7 cut(s) 28, 223, 329, 365, 1457, 1966, 2183
XbaI TCTAGA 1 cut(s) 286
XmiI GTMKAC 3 cut(s) 1167, 1657, 1869
XmnI GAANNNNTTC 1 cut(s) 480
XspI CTAG 6 cut(s) 234, 287, 600, 1346, 1568, 1880
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.