Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0007739

Physical Location & Seq

Genomic Coordinates Forward (+)

45757325 .. 45771904

Gene Structure 14580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG283200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2199 bp

ATGGATTTTGGGGCCGACGACGACGACGACTGGAATTTCAGCGCGGAAGAGCTTGATTCCCTCGAAAGAGACGCTTTCCAGAAACTCTCTCAGCAACGCATCAACTCCGCTTCCACTTGTTCTTCTTCTTCTTCCTTTTCATTCAATCACCACCACCACCCACACCAGTCATCTTTACCCACCACTAGCAATGCCTTCGAAAGCTTCATTCCGATTTCTCTTCCTAACCAGGTGCCGCCGCCGCCTTTGTCTCCTGGAGCCAGAGTATTACCTTCTTCTCTAGACGTTAAAGTAAACCCTGTTGAATGGAAGCTCACTGTCAAATTTTTTCTTCATGCTACTGGAAACATTGCTGCAAAATTTTCTTATGACCAGGCGTTGGTAGCTGCTTTCCGCAAGATCCCCAAAGCCGCATGGAATGCAAAAGAAAGGTTATGGATGTTCCCTGTGTCTTCTTTGTCATCGGCAGAAAAAGTTCTTCATGAAGTATCAGGAGTCAATGTTGAGATAGAGAACTTAGATCCCTTAGTCCACCGGGCCATTGCTGCTGTGTCTGTTGTTCCAGATATTCGAGACCTGTATGACAGGATACCTAGCTTTATTGAATCAAAGCTCTTGGGATTTCAGCGAGAAGGTGTAAGGTTTATCTTGCAGCATGGAGGGCGTGCATTCCTTGCTGATGAAATGGGACTGGGGAAGACTTTACAGGCTATTGCTGTGGCTTCCTGCATTCGTGACTCATGGCCTGTTCTTATACTCACACCATCTTCATTGCGTCTGCAGTGGGCCTCTATGATTCAACAATGGATGAACATTCCTCCATCAGATATACTTGTTGTTTTGTCCCAATGTGGGGGTTCAAACAGAGCTGGATATACATTAGTATCCTCAAGTTCCAAAGGGACCATTCATCTTGATGGCCTATTTAACATAATCTCTTATGACACAGTCCCTAAACTACAGAATCTGCTGATGGCATCAGATTTTAAGATTGTGATTGCAGATGAGTCACACTTTTTGAAAAATGCTCAAGCAAAAAGGACAACTGCTTCCCTGCCTGTCATCAAGAAGGCTCAATATGCAATACTGTTAAGTGGAACTCCTGCATTGTCCCGACCGATCGAACTATTTACACAGCTGGAAGCCTTGTATCCTGATGTATACAAAAATGTTCATGAATATGGCAAACGATATTGCAAGGGTGGAACATTTGGAATGTATCAAGGTGCAAGTAACCATGAAGAATTGCATAATTTGTTGAAGGCAACAGTGATGATTCGGAGACTCAAAAATGATGTACTCTCTGAACTTCCTGTGAAGCGCAGACAACAGGTCTTCCTAGATTTGGCTGAAAAGGACATGAAACAAATCAATGCTTTATTCCGTGAGTTGGAGGTGGTAAAGCTGAAAATTAAGGCCTGCAAATCAAAAGAAGAAGTTGATTCACTTAAATTTATGGAGAAGAATCTTATCAATAAGATTTATACTGATTCGGCGGAGGCCAAGATCCCAGCAGTTCTGGATTACCTGGGAACTGTCATCGAGGCTGGTTGCAAGTTTCTAGTATTTGCACATCATCAATCCATGATCGATGCAATATATCAGTTTCTTCTGAAGAAGAAAGTGAGTTGTATTCGAATTGATGGCAGTATACCTACAGTAGAGAGGCAAGCATATGTTACGCAGTTTCAAGAAAAAGATTCTGTCAAGGCAGCAGTGCTATCTATCAAAGCCGGAGGTGTGGGATTAACTTTAACAGCTGCAAGCACTGTAATATTTGCAGAATTGTCGTGGACTCCTGGTGACCTAATTCAAGCTGAAGATCGTGCTCACAGAATTGGCCAGGTGTCCTCGGTCAATGTATACTACCTTCTAGCGAACGACACAGTTGATGACATCATATGGGATGTTGTTCAGAGCAAGTTGGAAAATCTGGGACAGATGCTGGATGGCCATGAGAATTCGTTGGAAGTTTCAGCCAGCCAGCCACGAAATAGCCCTGCAAAGCCGAAAAATAGCCCTGCCAAGCCGAAAAATAGCCCTGCAAAGCAGAAAACACTGGATTCTTTCTTGAAAGTTTCAACCAACCAGTCAAACATCAGCCCAGGAAAGCAAAAAACACTTGATTCCTTCTTGAAGCGTTGCAACAACAGTGAAGACCATGAAATTGAGCCCAAATTTAAATACCCGAGGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000018 GO:0000228 GO:0000733 GO:0003674 GO:0003676 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0031297 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031593 GO:0031974 GO:0031981 GO:0032392 GO:0033554 GO:0034641 GO:0034645 GO:0036292 GO:0036310 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048478 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070530 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090329 GO:0097159 GO:0097617 GO:0140030 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:2000104 GO:2000112 GO:2000113

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Helicase_C SNF2_N

Protein Analysis

732

Amino Acids

81.45

Weight (kDa)

8.49

Isoelectric Point (pI)

43.32

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
SNF2-rel_dom	PF00176	208 - 484	8.3e-34	SNF2-related domain
Helicase_C	PF00271	506 - 614	3.4e-19	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007739)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G48310 AT1G48310 AT1G48310 AT1G48310
fragaria_vesca	FvH4_4g21690 FvH4_4g21690 FvH4_4g21690
malus_domestica	MD16G1134000.v1.1
prunus_persica	Prupe.1G103200_v2.0.a1
pyrus_communis	pycom13g12030 pycom16g11830
rosa_chinensis	RchiOBHm_Chr4g0427901
rosa_laevigata	RLG00000007202
rosa_multiflora	Rmu_sc0000066.1_g000015 Rmu_sc0009221.1_g000001
rosa_roxburghii	Rroxscaffold_5G00369560
rosa_rugosa	Rorug04G0219800 Rorug04G0220300 Rorug04G0220400
rosa_samantha	Rh4AG277400 Rh4BG283200 Rh4CG298700 Rh4DG280300
rosa_wichuraiana	Rw4G024100

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	232
AccB7I	CCANNNNNTGG	1 cut(s)	379
AccI	GTMKAC	3 cut(s)	1161, 1651, 1863
AccII	CGCG	1 cut(s)	44
AciI	CCGC	8 cut(s)	44, 108, 236, 239, 242, 394, 411, 1496
AclWI	GGATC	3 cut(s)	394, 515, 1501
AcoI	YGGCCR	2 cut(s)	1840, 1951
AcsI	RAATTY	6 cut(s)	34, 323, 359, 1451, 1960, 2177
AcuI	CTGAAG	2 cut(s)	1634, 1839
AfaI	GTAC	1 cut(s)	1299
AfiI	CCNNNNNNNGG	5 cut(s)	379, 852, 853, 1345, 1390
AhdI	GACNNNNNGTC	1 cut(s)	1331
AjnI	CCWGG	7 cut(s)	228, 253, 372, 1527, 1798, 1842, 2104
Alw21I	GWGCWC	1 cut(s)	1831
Alw26I	GTCTC	4 cut(s)	63, 255, 567, 1276
AlwI	GGATC	3 cut(s)	394, 515, 1501
AlwNI	CAGNNNCTG	2 cut(s)	967, 1945
Ama87I	CYCGRG	1 cut(s)	2188
AoxI	GGCC	9 cut(s)	12, 537, 743, 786, 919, 1416, 1500, 1840, 1951
ApeKI	GCWGC	6 cut(s)	353, 386, 545, 652, 1712, 1760
ApoI	RAATTY	6 cut(s)	34, 323, 359, 1451, 1960, 2177
Asp700I	GAANNNNTTC	1 cut(s)	474
AspLEI	GCGC	2 cut(s)	44, 1323
AspS9I	GGNCC	4 cut(s)	12, 537, 786, 903
AsuC2I	CCSGG	1 cut(s)	536
AsuHPI	GGTGA	2 cut(s)	140, 1814
AsuII	TTCGAA	2 cut(s)	198, 1636
AvaI	CYCGRG	1 cut(s)	2188
AvaII	GGWCC	1 cut(s)	903
BaeI	ACNNNNGTAYC	2 cut(s)	867, 900
BalI	TGGCCA	2 cut(s)	1842, 1953
BanI	GGYRCC	1 cut(s)	232
BanII	GRGCYC	1 cut(s)	2175
BarI	GAAGNNNNNNTAC	2 cut(s)	1854, 1886
BbsI	GAAGAC	4 cut(s)	444, 704, 1327, 2163
Bbv12I	GWGCWC	1 cut(s)	1831
BbvI	GCAGC	6 cut(s)	340, 373, 532, 664, 1724, 1747
BccI	CCATC	6 cut(s)	772, 829, 911, 967, 1637, 1943
BcgI	CGANNNNNNTGC	4 cut(s)	178, 212, 1770, 1804
BciT130I	CCWGG	7 cut(s)	230, 255, 374, 1529, 1800, 1844, 2106
BciVI	GTATCC	3 cut(s)	582, 895, 1161
BcnI	CCSGG	1 cut(s)	536
BcoDI	GTCTC	4 cut(s)	63, 255, 567, 1276
BfaI	CTAG	6 cut(s)	186, 281, 594, 1340, 1562, 1874
BfmI	CTRYAG	3 cut(s)	779, 959, 1656
BfuI	GTATCC	3 cut(s)	582, 895, 1161
Bme1390I	CCNGG	8 cut(s)	230, 255, 374, 536, 1529, 1800, 1844, 2106
Bme18I	GGWCC	1 cut(s)	903
BmeRI	GACNNNNNGTC	1 cut(s)	1331
BmeT110I	CYCGRG	1 cut(s)	2188
BmgT120I	GGNCC	4 cut(s)	12, 537, 786, 903
BmiI	GGNNCC	4 cut(s)	13, 234, 259, 904
BmrFI	CCNGG	8 cut(s)	230, 255, 374, 536, 1529, 1800, 1844, 2106
BmrI	ACTGGG	1 cut(s)	701
BmsI	GCATC	4 cut(s)	108, 986, 1582, 1932
BmuI	ACTGGG	1 cut(s)	701
BpiI	GAAGAC	4 cut(s)	444, 704, 1327, 2163
BpmI	CTGGAG	1 cut(s)	276
Bpu14I	TTCGAA	2 cut(s)	198, 1636
BpuEI	CTTGAG	2 cut(s)	874, 1014
BpuMI	CCSGG	1 cut(s)	536
Bsa29I	ATCGAT	1 cut(s)	1590
BsaI	GGTCTC	1 cut(s)	567
BsaJI	CCNNGG	4 cut(s)	1528, 1851, 2104, 2189
BsaXI	ACNNNNNCTCC	4 cut(s)	249, 279, 486, 516
Bsc4I	CCNNNNNNNGG	5 cut(s)	379, 852, 853, 1345, 1390
Bse1I	ACTGG	6 cut(s)	35, 166, 346, 696, 2064, 2089
Bse3DI	GCAATG	4 cut(s)	196, 348, 540, 770
BseBI	CCWGG	7 cut(s)	230, 255, 374, 1529, 1800, 1844, 2106
BseCI	ATCGAT	1 cut(s)	1590
BseDI	CCNNGG	4 cut(s)	1528, 1851, 2104, 2189
BseGI	GGATG	4 cut(s)	444, 813, 1912, 1954
BseLI	CCNNNNNNNGG	5 cut(s)	379, 852, 853, 1345, 1390
BseMI	GCAATG	4 cut(s)	196, 348, 540, 770
BseMII	CTCAG	1 cut(s)	104
BseNI	ACTGG	6 cut(s)	35, 166, 346, 696, 2064, 2089
BseXI	GCAGC	6 cut(s)	340, 373, 532, 664, 1724, 1747
BseYI	CCCAGC	1 cut(s)	1510
Bsh1236I	CGCG	1 cut(s)	44
Bsh1285I	CGRYCG	2 cut(s)	1118, 1122
BshFI	GGCC	9 cut(s)	14, 539, 745, 788, 921, 1418, 1502, 1842, 1953
BshNI	GGYRCC	1 cut(s)	232
BshVI	ATCGAT	1 cut(s)	1590
BsiEI	CGRYCG	2 cut(s)	1118, 1122
BsiHKAI	GWGCWC	1 cut(s)	1831
BsiHKCI	CYCGRG	1 cut(s)	2188
BsiSI	CCGG	2 cut(s)	535, 1734
BslFI	GGGAC	6 cut(s)	702, 829, 916, 935, 1096, 1950
BslI	CCNNNNNNNGG	5 cut(s)	379, 852, 853, 1345, 1390
BsmAI	GTCTC	4 cut(s)	63, 255, 567, 1276
BsmBI	CGTCTC	1 cut(s)	63
BsmFI	GGGAC	6 cut(s)	702, 829, 916, 935, 1096, 1950
BsmI	GAATGC	3 cut(s)	424, 668, 729
BsnI	GGCC	9 cut(s)	14, 539, 745, 788, 921, 1418, 1502, 1842, 1953
Bso31I	GGTCTC	1 cut(s)	567
BsoBI	CYCGRG	1 cut(s)	2188
Bsp119I	TTCGAA	2 cut(s)	198, 1636
Bsp1286I	GDGCHC	2 cut(s)	1831, 2175
Bsp143I	GATC	6 cut(s)	399, 520, 1119, 1506, 1587, 1822
BspACI	CCGC	8 cut(s)	44, 108, 236, 239, 242, 394, 411, 1496
BspANI	GGCC	9 cut(s)	14, 539, 745, 788, 921, 1418, 1502, 1842, 1953
BspCNI	CTCAG	1 cut(s)	103
BspDI	ATCGAT	1 cut(s)	1590
BspFNI	CGCG	1 cut(s)	44
BspHI	TCATGA	2 cut(s)	481, 1174
BspLI	GGNNCC	4 cut(s)	13, 234, 259, 904
BspMAI	CTGCAG	1 cut(s)	783
BspPI	GGATC	3 cut(s)	394, 515, 1501
BspQI	GCTCTTC	1 cut(s)	42
BspT104I	TTCGAA	2 cut(s)	198, 1636
BspT107I	GGYRCC	1 cut(s)	232
BspTNI	GGTCTC	1 cut(s)	567
BsrDI	GCAATG	4 cut(s)	196, 348, 540, 770
BsrI	ACTGG	6 cut(s)	35, 166, 346, 696, 2064, 2089
BssECI	CCNNGG	4 cut(s)	1528, 1851, 2104, 2189
BssMI	GATC	6 cut(s)	399, 520, 1119, 1506, 1587, 1822
BssNAI	GTATAC	3 cut(s)	1162, 1652, 1864
Bst1107I	GTATAC	3 cut(s)	1162, 1652, 1864
Bst2UI	CCWGG	7 cut(s)	230, 255, 374, 1529, 1800, 1844, 2106
Bst4CI	ACNGT	9 cut(s)	319, 949, 1089, 1270, 1537, 1660, 1771, 1888, 2153
Bst6I	CTCTTC	2 cut(s)	42, 225
BstAPI	GCANNNNNTGC	2 cut(s)	419, 674
BstBI	TTCGAA	2 cut(s)	198, 1636
BstC8I	GCNNGC	6 cut(s)	666, 1420, 1671, 1765, 1981, 1985
BstDEI	CTNAG	3 cut(s)	90, 517, 526
BstEII	GGTNACC	1 cut(s)	1802
BstF5I	GGATG	4 cut(s)	444, 813, 1912, 1954
BstFNI	CGCG	1 cut(s)	44
BstHHI	GCGC	2 cut(s)	44, 1323
BstKTI	GATC	6 cut(s)	402, 523, 1122, 1509, 1590, 1825
BstMAI	GTCTC	4 cut(s)	63, 255, 567, 1276
BstMBI	GATC	6 cut(s)	399, 520, 1119, 1506, 1587, 1822
BstMCI	CGRYCG	2 cut(s)	1118, 1122
BstMWI	GCNNNNNNNGC	7 cut(s)	241, 383, 419, 545, 661, 674, 1079
BstNI	CCWGG	7 cut(s)	230, 255, 374, 1529, 1800, 1844, 2106
BstPI	GGTNACC	1 cut(s)	1802
BstSCI	CCNGG	8 cut(s)	228, 253, 372, 534, 1527, 1798, 1842, 2104
BstSFI	CTRYAG	3 cut(s)	779, 959, 1656
BstUI	CGCG	1 cut(s)	44
BstV1I	GCAGC	6 cut(s)	340, 373, 532, 664, 1724, 1747
BstV2I	GAAGAC	4 cut(s)	444, 704, 1327, 2163
BstX2I	RGATCY	3 cut(s)	399, 520, 1506
BstYI	RGATCY	3 cut(s)	399, 520, 1506
BstZ17I	GTATAC	3 cut(s)	1162, 1652, 1864
Bsu15I	ATCGAT	1 cut(s)	1590
BsuI	GTATCC	3 cut(s)	582, 895, 1161
BsuRI	GGCC	9 cut(s)	14, 539, 745, 788, 921, 1418, 1502, 1842, 1953
BsuTUI	ATCGAT	1 cut(s)	1590
BtsCI	GGATG	4 cut(s)	444, 813, 1912, 1954
BtsI	GCAGTG	2 cut(s)	788, 1722
BtsIMutI	CAGTG	7 cut(s)	315, 788, 1275, 1722, 1767, 2057, 2158
Cac8I	GCNNGC	6 cut(s)	666, 1420, 1671, 1765, 1981, 1985
CaiI	CAGNNNCTG	2 cut(s)	967, 1945
CciI	TCATGA	2 cut(s)	481, 1174
CfoI	GCGC	2 cut(s)	44, 1323
Cfr13I	GGNCC	4 cut(s)	12, 537, 786, 903
ClaI	ATCGAT	1 cut(s)	1590
CseI	GACGC	2 cut(s)	80, 764
CsiI	ACCWGGT	1 cut(s)	228
Csp6I	GTAC	1 cut(s)	1298
CviQI	GTAC	1 cut(s)	1298
DdeI	CTNAG	3 cut(s)	90, 517, 526
DpnI	GATC	6 cut(s)	401, 522, 1121, 1508, 1589, 1824
DpnII	GATC	6 cut(s)	399, 520, 1119, 1506, 1587, 1822
DraI	TTTAAA	1 cut(s)	2182
DriI	GACNNNNNGTC	1 cut(s)	1331
EaeI	YGGCCR	2 cut(s)	1840, 1951
Eam1104I	CTCTTC	2 cut(s)	42, 225
Eam1105I	GACNNNNNGTC	1 cut(s)	1331
EarI	CTCTTC	2 cut(s)	42, 225
EciI	GGCGGA	1 cut(s)	1511
Eco147I	AGGCCT	1 cut(s)	1418
Eco24I	GRGCYC	1 cut(s)	2175
Eco31I	GGTCTC	1 cut(s)	567
Eco47I	GGWCC	1 cut(s)	903
Eco57I	CTGAAG	2 cut(s)	1634, 1839
Eco88I	CYCGRG	1 cut(s)	2188
Eco91I	GGTNACC	1 cut(s)	1802
EcoO65I	GGTNACC	1 cut(s)	1802
EcoRI	GAATTC	1 cut(s)	1960
EcoRII	CCWGG	7 cut(s)	228, 253, 372, 1527, 1798, 1842, 2104
EcoT38I	GRGCYC	1 cut(s)	2175
Esp3I	CGTCTC	1 cut(s)	63
FalI	AAGNNNNNCTT	2 cut(s)	58, 90
FaqI	GGGAC	6 cut(s)	702, 829, 916, 935, 1096, 1950
FauNDI	CATATG	2 cut(s)	1675, 1901
FblI	GTMKAC	3 cut(s)	1161, 1651, 1863
FokI	GGATG	4 cut(s)	451, 820, 1919, 1961
FriOI	GRGCYC	1 cut(s)	2175
FspBI	CTAG	6 cut(s)	186, 281, 594, 1340, 1562, 1874
GlaI	GCGC	2 cut(s)	43, 1322
GsaI	CCCAGC	1 cut(s)	1514
GsuI	CTGGAG	1 cut(s)	276
HaeIII	GGCC	9 cut(s)	14, 539, 745, 788, 921, 1418, 1502, 1842, 1953
HapII	CCGG	2 cut(s)	535, 1734
HgaI	GACGC	2 cut(s)	80, 764
HhaI	GCGC	2 cut(s)	44, 1323
Hin6I	GCGC	2 cut(s)	42, 1321
HinP1I	GCGC	2 cut(s)	42, 1321
HindIII	AAGCTT	1 cut(s)	202
HpaII	CCGG	2 cut(s)	535, 1734
HphI	GGTGA	2 cut(s)	140, 1814
Hpy166II	GTNNAC	6 cut(s)	295, 532, 1162, 1652, 1794, 1864
Hpy188I	TCNGA	7 cut(s)	213, 826, 982, 1281, 1306, 1614, 1917
Hpy8I	GTNNAC	6 cut(s)	295, 532, 1162, 1652, 1794, 1864
Hpy99I	CGWCG	4 cut(s)	20, 23, 26, 29
HpyAV	CCTTC	7 cut(s)	205, 282, 626, 1063, 1255, 1880, 2140
HpyCH4III	ACNGT	9 cut(s)	319, 949, 1089, 1270, 1537, 1660, 1771, 1888, 2153
HpyCH4IV	ACGT	1 cut(s)	285
HpyF10VI	GCNNNNNNNGC	7 cut(s)	241, 383, 419, 545, 661, 674, 1079
HpyF3I	CTNAG	3 cut(s)	90, 517, 526
HpySE526I	ACGT	1 cut(s)	285
HspAI	GCGC	2 cut(s)	42, 1321
Kzo9I	GATC	6 cut(s)	399, 520, 1119, 1506, 1587, 1822
LguI	GCTCTTC	1 cut(s)	42
LmnI	GCTCC	1 cut(s)	257
Lsp1109I	GCAGC	6 cut(s)	340, 373, 532, 664, 1724, 1747
LweI	GCATC	4 cut(s)	108, 986, 1582, 1932
MabI	ACCWGGT	1 cut(s)	228
MaeI	CTAG	6 cut(s)	186, 281, 594, 1340, 1562, 1874
MaeII	ACGT	1 cut(s)	285
MaeIII	GTNAC	5 cut(s)	734, 1008, 1232, 1678, 1802
MalI	GATC	6 cut(s)	401, 522, 1121, 1508, 1589, 1824
MboI	GATC	6 cut(s)	399, 520, 1119, 1506, 1587, 1822
MflI	RGATCY	3 cut(s)	399, 520, 1506
MhlI	GDGCHC	2 cut(s)	1831, 2175
MlsI	TGGCCA	2 cut(s)	1842, 1953
MluNI	TGGCCA	2 cut(s)	1842, 1953
MlyI	GAGTC	5 cut(s)	504, 731, 1016, 1278, 1789
MmeI	TCCRAC	3 cut(s)	1371, 1905, 1947
Mox20I	TGGCCA	2 cut(s)	1842, 1953
MroXI	GAANNNNTTC	1 cut(s)	474
MscI	TGGCCA	2 cut(s)	1842, 1953
MseI	TTAA	9 cut(s)	288, 927, 987, 1091, 1413, 1449, 1748, 1754, 2181
MslI	CAYNNNNRTG	2 cut(s)	915, 1179
Msp20I	TGGCCA	2 cut(s)	1842, 1953
MspA1I	CMGCKG	2 cut(s)	1138, 1760
MspI	CCGG	2 cut(s)	535, 1734
MspR9I	CCNGG	8 cut(s)	230, 255, 374, 536, 1529, 1800, 1844, 2106
Mva1269I	GAATGC	3 cut(s)	424, 668, 729
MvaI	CCWGG	7 cut(s)	230, 255, 374, 1529, 1800, 1844, 2106
MvnI	CGCG	1 cut(s)	44
MwoI	GCNNNNNNNGC	7 cut(s)	241, 383, 419, 545, 661, 674, 1079
NciI	CCSGG	1 cut(s)	536
NdeI	CATATG	2 cut(s)	1675, 1901
NdeII	GATC	6 cut(s)	399, 520, 1119, 1506, 1587, 1822
NlaIV	GGNNCC	4 cut(s)	13, 234, 259, 904
NmuCI	GTSAC	3 cut(s)	734, 1008, 1802
NspV	TTCGAA	2 cut(s)	198, 1636
PagI	TCATGA	2 cut(s)	481, 1174
PceI	AGGCCT	1 cut(s)	1418
PciSI	GCTCTTC	1 cut(s)	42
PcsI	WCGNNNNNNNCGW	1 cut(s)	24
PctI	GAATGC	3 cut(s)	424, 668, 729
PdmI	GAANNNNTTC	1 cut(s)	474
PflFI	GACNNNGTC	1 cut(s)	947
PflMI	CCANNNNNTGG	1 cut(s)	379
PfoI	TCCNGGA	1 cut(s)	253
Ple19I	CGATCG	1 cut(s)	1122
PleI	GAGTC	5 cut(s)	503, 731, 1015, 1278, 1789
PpsI	GAGTC	5 cut(s)	503, 731, 1015, 1278, 1789
Psp6I	CCWGG	7 cut(s)	228, 253, 372, 1527, 1798, 1842, 2104
PspEI	GGTNACC	1 cut(s)	1802
PspFI	CCCAGC	1 cut(s)	1510
PspGI	CCWGG	7 cut(s)	228, 253, 372, 1527, 1798, 1842, 2104
PspN4I	GGNNCC	4 cut(s)	13, 234, 259, 904
PspPI	GGNCC	4 cut(s)	12, 537, 786, 903
PstI	CTGCAG	1 cut(s)	783
PstNI	CAGNNNCTG	2 cut(s)	967, 1945
PsuI	RGATCY	3 cut(s)	399, 520, 1506
PsyI	GACNNNGTC	1 cut(s)	947
PvuI	CGATCG	1 cut(s)	1122
PvuII	CAGCTG	2 cut(s)	1138, 1760
RsaI	GTAC	1 cut(s)	1299
RsaNI	GTAC	1 cut(s)	1298
RseI	CAYNNNNRTG	2 cut(s)	915, 1179
SapI	GCTCTTC	1 cut(s)	42
SaqAI	TTAA	9 cut(s)	288, 927, 987, 1091, 1413, 1449, 1748, 1754, 2181
Sau3AI	GATC	6 cut(s)	399, 520, 1119, 1506, 1587, 1822
Sau96I	GGNCC	4 cut(s)	12, 537, 786, 903
SchI	GAGTC	5 cut(s)	504, 731, 1016, 1278, 1789
ScrFI	CCNGG	8 cut(s)	230, 255, 374, 536, 1529, 1800, 1844, 2106
SduI	GDGCHC	2 cut(s)	1831, 2175
SexAI	ACCWGGT	1 cut(s)	228
SfaNI	GCATC	4 cut(s)	108, 986, 1582, 1932
SfcI	CTRYAG	3 cut(s)	779, 959, 1656
SfuI	TTCGAA	2 cut(s)	198, 1636
SinI	GGWCC	1 cut(s)	903
SmiI	ATTTAAAT	1 cut(s)	2182
SmiMI	CAYNNNNRTG	2 cut(s)	915, 1179
SmlI	CTYRAG	2 cut(s)	889, 1029
SmoI	CTYRAG	2 cut(s)	889, 1029
SseBI	AGGCCT	1 cut(s)	1418
SsiI	CCGC	8 cut(s)	44, 108, 236, 239, 242, 394, 411, 1496
SspI	AATATT	1 cut(s)	1776
SspMI	CTAG	6 cut(s)	186, 281, 594, 1340, 1562, 1874
StuI	AGGCCT	1 cut(s)	1418
StyD4I	CCNGG	8 cut(s)	228, 253, 372, 534, 1527, 1798, 1842, 2104
SwaI	ATTTAAAT	1 cut(s)	2182
TaaI	ACNGT	9 cut(s)	319, 949, 1089, 1270, 1537, 1660, 1771, 1888, 2153
TaiI	ACGT	1 cut(s)	288
TaqI	TCGA	7 cut(s)	63, 198, 571, 1122, 1542, 1590, 1636
TaqII	GACCGA	2 cut(s)	1132, 1843
TatI	WGTACW	1 cut(s)	1297
TauI	GCSGC	4 cut(s)	238, 241, 244, 413
Tru1I	TTAA	9 cut(s)	288, 927, 987, 1091, 1413, 1449, 1748, 1754, 2181
Tru9I	TTAA	9 cut(s)	288, 927, 987, 1091, 1413, 1449, 1748, 1754, 2181
TscAI	CASTG	7 cut(s)	322, 788, 1275, 1722, 1774, 2064, 2158
TseFI	GTSAC	3 cut(s)	734, 1008, 1802
TseI	GCWGC	6 cut(s)	353, 386, 545, 652, 1712, 1760
Tsp45I	GTSAC	3 cut(s)	734, 1008, 1802
TspGWI	ACGGA	1 cut(s)	1373
TspRI	CASTG	7 cut(s)	322, 788, 1275, 1722, 1774, 2064, 2158
Tth111I	GACNNNGTC	1 cut(s)	947
Van91I	CCANNNNNTGG	1 cut(s)	379
VpaK11BI	GGWCC	1 cut(s)	903
XapI	RAATTY	6 cut(s)	34, 323, 359, 1451, 1960, 2177
XbaI	TCTAGA	1 cut(s)	280
XmiI	GTMKAC	3 cut(s)	1161, 1651, 1863
XmnI	GAANNNNTTC	1 cut(s)	474
XspI	CTAG	6 cut(s)	186, 281, 594, 1340, 1562, 1874

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.