Rh4CG298700

SWI SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4C
OG0007739
Physical Location & Seq
Forward (+)
55903808 .. 55911379
7572 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4CG298700.1

Sequence Viewer

Length: 2229 bp
ATGGATTTTGGGGCGGACGACGACGTCGACTGGAATTTCAGCGCGGAAGAGCTTGATTCCCTCGAAAGAGACGCTTTCCAGAAACTCTCTCAGCAACGCATCAACTCCGCTTCCACTGGTTCCTGTTCTTCTTCTTCTTCTTCCTTTTCATTCAATCGCCACCACCCACACCAGTCTTTACCCACCAACAGCAATGCCTTCGAAAGCTTCATTCCGAATTCATTTCCTAACCAGGTGCCGCCCCCGCCGCCGCCTTTGTCTCCTGGAGCCAGAGTATTACCTTCTTCTCTAGACGTTAAAGTAGACCCTGTTGAATGGAAGCTCACTGTCAAATTTTTTCTTCATGCTACTGGAAACATTGCTGCAAAATTCTCCTATGATCAGGTGTTGGTAGCTGCTTTCCGCAAGATCCCCAAAGTCACATGGAATGCAAAAGAAAGGTTATGGATGTTCCCTGTGTCTTCTTTGTCATCGGCAGAAAAAGTTCTTCATGAAGTATCAGGAGTCAATGTTGAGATAGAGAACTTAGATCCCTTAGTCCACCGGGCCATTGCTGCTGTATCTGTTGTTCCAGATATTCGAGACCTGTATGACAGGATACCTAGCTTTATTGAATCAAAGCTCTTGGGATTTCAGCGAGAAGGTGTAAGGTTTATTTTGCAGCATGGAGGGCGTGCATTCCTTGCTGATGAAATGGGACTGGGGAAGACTTTACAGGCTATTGCTGTGGCTTCCTGCATTCGTGACTCATGGCCTGTTCTTATACTCACACCATCTTCATTGCGTCTGCAATGGGCCTCTATGATTCAACAATGGATGAACATTCCTCCATCAGATATTAGTGTTGTTTTGTCTCAATGTGGGGGTTCAAACAGAGCTGGATATACATTAGTATCCTCAAGTTCCAAAGGGACCATTCATCTTGATGGCGTATTTAACATAATCTCTTATGACATAGTCCCTAAACTACAGAATCTGCTGATGGCATCAGATTTTAAGATTGTGATTGCAGATGAGTCGCACTTTTTGAAAAATGCTCAAGCAAAAAGGACAACTGCTTCCCTGCCTGTCATCAAGAAGGCTCAATATGCAATACTGTTAAGTGGAACTCCTGCATTGTCCCGACCGATTGAACTATTTACGCAGCTGGAAGCCTTGTATCCTGATGTATACAAAAATGTTCATGAATATGGCAAACGATATTGCAAGGGTGGAACATTTGGAATGTATCAAGGTGCAAGTAACCATGAAGAATTGCATAATTTGTTGAAGGCAACAGTGATGATTCGGAGACTAAAAAATGATGTACTCTCTGAACTTCCTGTGAAGCGCAGACAACAGGTCTTCCTAGATTTGGCTGAAAAGGACATGAAACAAATCAATGCTTTATTTCGTGAGTTGGAGGTGGTAAAGCTGAAAATTAAGGCCTGCAAATCAAAAGAAGAAGTTGATTCACTTAAATTTATGGAGAAGAATCTTATCAATAGGATTTATACTGATTCAGCGGAGGCCAAGATCCCAGCAGTTCTGGATTACCTGGGAACTGTCATCGAGGCTGGTTGCAAGTTTCTAGTATTTGCACATCATCAATCCATGATCGATGCAATATATCAGTTTCTTCTGAAGAAGAAAGTGAGTTGTATTCGAATTGATGGCAGTATACCTACAGTAGAGAGGCAAGCATATGTTACGCAGTTTCAAGAAAAAGATTCTGTCAAGGCAGCAGTGCTATCTATCAAAGCCGGAGGTGTGGGATTAACTTTAACAGCTGCAAGCACTGTAATATTTGCAGAATTGTCGTGGACTCCTGGTGACCTAATTCAAGCTGAAGATCGTGCTCACAGAATTGGCCAGGTGTCCTCGGTCAATGTATACTACCTTCTAGCGAACGACACAGTTGATGACATCATATGGGATGTTGTTCAGAGCAAGTTGGAAAATCTGGGACAGATGCTGGATGGCCATGAGAATTCGTTGGAAGTTTCAGCCAGCCAGCTGCGAAATAGCCCTGCAAAGCCGAAAAATAGCCCTGCAAAGCCGAAAAATAGCCCTGCCAAGCCGAAATATAGCCCTGCTAAGCAGAAAACACTGGATTCTTTCTTGAAAGTTTCAACCAACCAGTCAAACATCAGCCCAGGAAAGCAAAAAACACTTGATTCCTTCTTGAAGCGTTGCAACAACAGTGAAGACCATGAAATTGAGCCCAAATTTAAATACCCAAGGCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000018 GO:0000228 GO:0000733 GO:0003674 GO:0003676 GO:0003824 GO:0004518 GO:0004519 GO:0004520 GO:0004536 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005657 GO:0005694 GO:0006139 GO:0006259 GO:0006260 GO:0006261 GO:0006275 GO:0006281 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0008150 GO:0008152 GO:0008156 GO:0009058 GO:0009059 GO:0009314 GO:0009411 GO:0009416 GO:0009628 GO:0009889 GO:0009890 GO:0009892 GO:0009987 GO:0010556 GO:0010558 GO:0010605 GO:0016043 GO:0016462 GO:0016787 GO:0016788 GO:0016817 GO:0016818 GO:0017111 GO:0019219 GO:0019222 GO:0031297 GO:0031323 GO:0031324 GO:0031326 GO:0031327 GO:0031593 GO:0031974 GO:0031981 GO:0032392 GO:0033554 GO:0034641 GO:0034645 GO:0036292 GO:0036310 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043596 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045005 GO:0045910 GO:0045934 GO:0046483 GO:0048478 GO:0048519 GO:0048523 GO:0050789 GO:0050794 GO:0050896 GO:0051052 GO:0051053 GO:0051171 GO:0051172 GO:0051276 GO:0051716 GO:0060255 GO:0065007 GO:0070013 GO:0070530 GO:0071103 GO:0071704 GO:0071840 GO:0080090 GO:0090304 GO:0090305 GO:0090329 GO:0097159 GO:0097617 GO:0140030 GO:0140097 GO:1901360 GO:1901363 GO:1901576 GO:2000104 GO:2000112 GO:2000113
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Helicase_C SNF2_N

Protein Analysis

742

Amino Acids

82.58

Weight (kDa)

8.77

Isoelectric Point (pI)

43.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SNF2-rel_dom PF00176 211 - 487 3.7e-34 SNF2-related domain
Helicase_C PF00271 509 - 617 3.4e-19 Helicase conserved C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 23
AatII GACGTC 1 cut(s) 27
AccB1I GGYRCC 1 cut(s) 235
AccI GTMKAC 5 cut(s) 27, 303, 1170, 1660, 1872
AccII CGCG 1 cut(s) 44
AciI CCGC 9 cut(s) 14, 44, 108, 239, 245, 248, 251, 403, 1505
AclWI GGATC 3 cut(s) 403, 524, 1510
AcoI YGGCCR 2 cut(s) 1849, 1960
AcsI RAATTY 7 cut(s) 34, 217, 332, 368, 1460, 1969, 2207
AcuI CTGAAG 2 cut(s) 1643, 1848
AcyI GRCGYC 1 cut(s) 24
AfaI GTAC 1 cut(s) 1308
AfiI CCNNNNNNNGG 1 cut(s) 1354
AhdI GACNNNNNGTC 1 cut(s) 1340
AjnI CCWGG 6 cut(s) 231, 262, 1536, 1807, 1851, 2134
Alw21I GWGCWC 1 cut(s) 1840
Alw26I GTCTC 5 cut(s) 63, 264, 576, 858, 1285
AlwI GGATC 3 cut(s) 403, 524, 1510
AlwNI CAGNNNCTG 2 cut(s) 976, 1954
AoxI GGCC 7 cut(s) 546, 752, 795, 1425, 1509, 1849, 1960
ApeKI GCWGC 8 cut(s) 362, 395, 554, 661, 1144, 1721, 1769, 1996
ApoI RAATTY 7 cut(s) 34, 217, 332, 368, 1460, 1969, 2207
Asp700I GAANNNNTTC 1 cut(s) 483
AspLEI GCGC 2 cut(s) 44, 1332
AspS9I GGNCC 3 cut(s) 546, 795, 912
AsuC2I CCSGG 1 cut(s) 545
AsuHPI GGTGA 1 cut(s) 1823
AsuII TTCGAA 2 cut(s) 201, 1645
AvaII GGWCC 1 cut(s) 912
BaeI ACNNNNGTAYC 2 cut(s) 876, 909
BalI TGGCCA 2 cut(s) 1851, 1962
BanI GGYRCC 1 cut(s) 235
BanII GRGCYC 1 cut(s) 2205
BarI GAAGNNNNNNTAC 2 cut(s) 1863, 1895
BbsI GAAGAC 4 cut(s) 453, 713, 1336, 2193
Bbv12I GWGCWC 1 cut(s) 1840
BbvI GCAGC 8 cut(s) 349, 382, 541, 673, 1156, 1733, 1756, 1983
BccI CCATC 6 cut(s) 781, 838, 920, 976, 1646, 1952
BcgI CGANNNNNNTGC 6 cut(s) 181, 215, 999, 1033, 1779, 1813
BciT130I CCWGG 6 cut(s) 233, 264, 1538, 1809, 1853, 2136
BciVI GTATCC 3 cut(s) 591, 904, 1170
BclI TGATCA 1 cut(s) 379
BcnI CCSGG 1 cut(s) 545
BcoDI GTCTC 5 cut(s) 63, 264, 576, 858, 1285
BfaI CTAG 5 cut(s) 290, 603, 1349, 1571, 1883
BfmI CTRYAG 2 cut(s) 968, 1665
BfuI GTATCC 3 cut(s) 591, 904, 1170
BlpI GCTNAGC 1 cut(s) 2076
Bme1390I CCNGG 7 cut(s) 233, 264, 545, 1538, 1809, 1853, 2136
Bme18I GGWCC 1 cut(s) 912
BmeRI GACNNNNNGTC 1 cut(s) 1340
BmgT120I GGNCC 3 cut(s) 546, 795, 912
BmiI GGNNCC 4 cut(s) 121, 237, 268, 913
BmrFI CCNGG 7 cut(s) 233, 264, 545, 1538, 1809, 1853, 2136
BmrI ACTGGG 1 cut(s) 710
BmsI GCATC 4 cut(s) 108, 995, 1591, 1941
BmuI ACTGGG 1 cut(s) 710
BpiI GAAGAC 4 cut(s) 453, 713, 1336, 2193
BpmI CTGGAG 1 cut(s) 285
Bpu1102I GCTNAGC 1 cut(s) 2076
Bpu14I TTCGAA 2 cut(s) 201, 1645
BpuEI CTTGAG 2 cut(s) 883, 1023
BpuMI CCSGG 1 cut(s) 545
Bsa29I ATCGAT 1 cut(s) 1599
BsaHI GRCGYC 1 cut(s) 24
BsaI GGTCTC 1 cut(s) 576
BsaJI CCNNGG 4 cut(s) 1537, 1860, 2134, 2219
BsaXI ACNNNNNCTCC 4 cut(s) 258, 288, 495, 525
Bsc4I CCNNNNNNNGG 1 cut(s) 1354
Bse1I ACTGG 7 cut(s) 35, 121, 172, 355, 705, 2094, 2119
Bse3DI GCAATG 5 cut(s) 199, 357, 549, 779, 797
BseBI CCWGG 6 cut(s) 233, 264, 1538, 1809, 1853, 2136
BseCI ATCGAT 1 cut(s) 1599
BseDI CCNNGG 4 cut(s) 1537, 1860, 2134, 2219
BseGI GGATG 4 cut(s) 453, 822, 1921, 1963
BseLI CCNNNNNNNGG 1 cut(s) 1354
BseMI GCAATG 5 cut(s) 199, 357, 549, 779, 797
BseMII CTCAG 1 cut(s) 104
BseNI ACTGG 7 cut(s) 35, 121, 172, 355, 705, 2094, 2119
BseXI GCAGC 8 cut(s) 349, 382, 541, 673, 1156, 1733, 1756, 1983
BseYI CCCAGC 1 cut(s) 1519
Bsh1236I CGCG 1 cut(s) 44
Bsh1285I CGRYCG 1 cut(s) 1127
BshFI GGCC 7 cut(s) 548, 754, 797, 1427, 1511, 1851, 1962
BshNI GGYRCC 1 cut(s) 235
BshVI ATCGAT 1 cut(s) 1599
BsiEI CGRYCG 1 cut(s) 1127
BsiHKAI GWGCWC 1 cut(s) 1840
BsiSI CCGG 2 cut(s) 544, 1743
BslFI GGGAC 5 cut(s) 711, 925, 944, 1105, 1959
BslI CCNNNNNNNGG 1 cut(s) 1354
BsmAI GTCTC 5 cut(s) 63, 264, 576, 858, 1285
BsmBI CGTCTC 1 cut(s) 63
BsmFI GGGAC 5 cut(s) 711, 925, 944, 1105, 1959
BsmI GAATGC 3 cut(s) 433, 677, 738
BsnI GGCC 7 cut(s) 548, 754, 797, 1427, 1511, 1851, 1962
Bso31I GGTCTC 1 cut(s) 576
Bsp119I TTCGAA 2 cut(s) 201, 1645
Bsp1286I GDGCHC 2 cut(s) 1840, 2205
Bsp143I GATC 6 cut(s) 379, 408, 529, 1515, 1596, 1831
Bsp1720I GCTNAGC 1 cut(s) 2076
BspACI CCGC 9 cut(s) 14, 44, 108, 239, 245, 248, 251, 403, 1505
BspANI GGCC 7 cut(s) 548, 754, 797, 1427, 1511, 1851, 1962
BspCNI CTCAG 1 cut(s) 103
BspDI ATCGAT 1 cut(s) 1599
BspFNI CGCG 1 cut(s) 44
BspHI TCATGA 2 cut(s) 490, 1183
BspLI GGNNCC 4 cut(s) 121, 237, 268, 913
BspPI GGATC 3 cut(s) 403, 524, 1510
BspQI GCTCTTC 1 cut(s) 42
BspT104I TTCGAA 2 cut(s) 201, 1645
BspT107I GGYRCC 1 cut(s) 235
BspTNI GGTCTC 1 cut(s) 576
BsrDI GCAATG 5 cut(s) 199, 357, 549, 779, 797
BsrI ACTGG 7 cut(s) 35, 121, 172, 355, 705, 2094, 2119
BssECI CCNNGG 4 cut(s) 1537, 1860, 2134, 2219
BssMI GATC 6 cut(s) 379, 408, 529, 1515, 1596, 1831
BssNAI GTATAC 3 cut(s) 1171, 1661, 1873
BssNI GRCGYC 1 cut(s) 24
BssT1I CCWWGG 1 cut(s) 2219
Bst1107I GTATAC 3 cut(s) 1171, 1661, 1873
Bst2UI CCWGG 6 cut(s) 233, 264, 1538, 1809, 1853, 2136
Bst4CI ACNGT 8 cut(s) 328, 1098, 1279, 1546, 1669, 1780, 1897, 2183
Bst6I CTCTTC 1 cut(s) 42
BstACI GRCGYC 1 cut(s) 24
BstAPI GCANNNNNTGC 1 cut(s) 683
BstBI TTCGAA 2 cut(s) 201, 1645
BstC8I GCNNGC 6 cut(s) 675, 1429, 1680, 1774, 1990, 1994
BstDEI CTNAG 4 cut(s) 90, 526, 535, 2076
BstEII GGTNACC 1 cut(s) 1811
BstF5I GGATG 4 cut(s) 453, 822, 1921, 1963
BstFNI CGCG 1 cut(s) 44
BstHHI GCGC 2 cut(s) 44, 1332
BstKTI GATC 6 cut(s) 382, 411, 532, 1518, 1599, 1834
BstMAI GTCTC 5 cut(s) 63, 264, 576, 858, 1285
BstMBI GATC 6 cut(s) 379, 408, 529, 1515, 1596, 1831
BstMCI CGRYCG 1 cut(s) 1127
BstMWI GCNNNNNNNGC 6 cut(s) 244, 247, 554, 670, 683, 1088
BstNI CCWGG 6 cut(s) 233, 264, 1538, 1809, 1853, 2136
BstPI GGTNACC 1 cut(s) 1811
BstSCI CCNGG 7 cut(s) 231, 262, 543, 1536, 1807, 1851, 2134
BstSFI CTRYAG 2 cut(s) 968, 1665
BstUI CGCG 1 cut(s) 44
BstV1I GCAGC 8 cut(s) 349, 382, 541, 673, 1156, 1733, 1756, 1983
BstV2I GAAGAC 4 cut(s) 453, 713, 1336, 2193
BstX2I RGATCY 3 cut(s) 408, 529, 1515
BstYI RGATCY 3 cut(s) 408, 529, 1515
BstZ17I GTATAC 3 cut(s) 1171, 1661, 1873
Bsu15I ATCGAT 1 cut(s) 1599
BsuI GTATCC 3 cut(s) 591, 904, 1170
BsuRI GGCC 7 cut(s) 548, 754, 797, 1427, 1511, 1851, 1962
BsuTUI ATCGAT 1 cut(s) 1599
BtsCI GGATG 4 cut(s) 453, 822, 1921, 1963
BtsI GCAGTG 1 cut(s) 1731
BtsIMutI CAGTG 7 cut(s) 114, 324, 1284, 1731, 1776, 2087, 2188
Cac8I GCNNGC 6 cut(s) 675, 1429, 1680, 1774, 1990, 1994
CaiI CAGNNNCTG 2 cut(s) 976, 1954
CciI TCATGA 2 cut(s) 490, 1183
CfoI GCGC 2 cut(s) 44, 1332
Cfr13I GGNCC 3 cut(s) 546, 795, 912
ClaI ATCGAT 1 cut(s) 1599
CseI GACGC 2 cut(s) 80, 773
CsiI ACCWGGT 1 cut(s) 231
Csp6I GTAC 1 cut(s) 1307
CviQI GTAC 1 cut(s) 1307
DdeI CTNAG 4 cut(s) 90, 526, 535, 2076
DpnI GATC 6 cut(s) 381, 410, 531, 1517, 1598, 1833
DpnII GATC 6 cut(s) 379, 408, 529, 1515, 1596, 1831
DraI TTTAAA 1 cut(s) 2212
DrdI GACNNNNNNGTC 1 cut(s) 23
DriI GACNNNNNGTC 1 cut(s) 1340
DseDI GACNNNNNNGTC 1 cut(s) 23
EaeI YGGCCR 2 cut(s) 1849, 1960
Eam1104I CTCTTC 1 cut(s) 42
Eam1105I GACNNNNNGTC 1 cut(s) 1340
EarI CTCTTC 1 cut(s) 42
EciI GGCGGA 1 cut(s) 29
Eco130I CCWWGG 1 cut(s) 2219
Eco147I AGGCCT 1 cut(s) 1427
Eco24I GRGCYC 1 cut(s) 2205
Eco31I GGTCTC 1 cut(s) 576
Eco47I GGWCC 1 cut(s) 912
Eco57I CTGAAG 2 cut(s) 1643, 1848
Eco91I GGTNACC 1 cut(s) 1811
EcoO65I GGTNACC 1 cut(s) 1811
EcoRI GAATTC 2 cut(s) 217, 1969
EcoRII CCWGG 6 cut(s) 231, 262, 1536, 1807, 1851, 2134
EcoT14I CCWWGG 1 cut(s) 2219
EcoT38I GRGCYC 1 cut(s) 2205
ErhI CCWWGG 1 cut(s) 2219
Esp3I CGTCTC 1 cut(s) 63
FalI AAGNNNNNCTT 2 cut(s) 58, 90
FaqI GGGAC 5 cut(s) 711, 925, 944, 1105, 1959
FauI CCCGC 1 cut(s) 252
FauNDI CATATG 2 cut(s) 1684, 1910
FbaI TGATCA 1 cut(s) 379
FblI GTMKAC 5 cut(s) 27, 303, 1170, 1660, 1872
FokI GGATG 4 cut(s) 460, 829, 1928, 1970
FriOI GRGCYC 1 cut(s) 2205
FspBI CTAG 5 cut(s) 290, 603, 1349, 1571, 1883
GlaI GCGC 2 cut(s) 43, 1331
GsaI CCCAGC 1 cut(s) 1523
GsuI CTGGAG 1 cut(s) 285
HaeIII GGCC 7 cut(s) 548, 754, 797, 1427, 1511, 1851, 1962
HapII CCGG 2 cut(s) 544, 1743
HgaI GACGC 2 cut(s) 80, 773
HhaI GCGC 2 cut(s) 44, 1332
Hin1I GRCGYC 1 cut(s) 24
Hin6I GCGC 2 cut(s) 42, 1330
HinP1I GCGC 2 cut(s) 42, 1330
HincII GTYRAC 1 cut(s) 28
HindII GTYRAC 1 cut(s) 28
HindIII AAGCTT 1 cut(s) 205
HpaII CCGG 2 cut(s) 544, 1743
HphI GGTGA 1 cut(s) 1823
Hpy166II GTNNAC 7 cut(s) 28, 304, 541, 1171, 1661, 1803, 1873
Hpy188I TCNGA 7 cut(s) 216, 835, 991, 1290, 1315, 1623, 1926
Hpy8I GTNNAC 7 cut(s) 28, 304, 541, 1171, 1661, 1803, 1873
Hpy99I CGWCG 3 cut(s) 23, 26, 29
HpyAV CCTTC 7 cut(s) 208, 291, 635, 1072, 1264, 1889, 2170
HpyCH4III ACNGT 8 cut(s) 328, 1098, 1279, 1546, 1669, 1780, 1897, 2183
HpyCH4IV ACGT 2 cut(s) 24, 294
HpyF10VI GCNNNNNNNGC 6 cut(s) 244, 247, 554, 670, 683, 1088
HpyF3I CTNAG 4 cut(s) 90, 526, 535, 2076
HpySE526I ACGT 2 cut(s) 24, 294
Hsp92I GRCGYC 1 cut(s) 24
HspAI GCGC 2 cut(s) 42, 1330
Ksp22I TGATCA 1 cut(s) 379
Kzo9I GATC 6 cut(s) 379, 408, 529, 1515, 1596, 1831
LguI GCTCTTC 1 cut(s) 42
LmnI GCTCC 1 cut(s) 266
Lsp1109I GCAGC 8 cut(s) 349, 382, 541, 673, 1156, 1733, 1756, 1983
LweI GCATC 4 cut(s) 108, 995, 1591, 1941
MabI ACCWGGT 1 cut(s) 231
MaeI CTAG 5 cut(s) 290, 603, 1349, 1571, 1883
MaeII ACGT 2 cut(s) 24, 294
MaeIII GTNAC 5 cut(s) 418, 743, 1241, 1687, 1811
MalI GATC 6 cut(s) 381, 410, 531, 1517, 1598, 1833
MboI GATC 6 cut(s) 379, 408, 529, 1515, 1596, 1831
MflI RGATCY 3 cut(s) 408, 529, 1515
MhlI GDGCHC 2 cut(s) 1840, 2205
MlsI TGGCCA 2 cut(s) 1851, 1962
MluNI TGGCCA 2 cut(s) 1851, 1962
MlyI GAGTC 4 cut(s) 513, 740, 1025, 1798
MmeI TCCRAC 3 cut(s) 1380, 1914, 1956
Mox20I TGGCCA 2 cut(s) 1851, 1962
MroXI GAANNNNTTC 1 cut(s) 483
MscI TGGCCA 2 cut(s) 1851, 1962
MseI TTAA 9 cut(s) 297, 936, 996, 1100, 1422, 1458, 1757, 1763, 2211
MslI CAYNNNNRTG 2 cut(s) 924, 1188
Msp20I TGGCCA 2 cut(s) 1851, 1962
MspA1I CMGCKG 4 cut(s) 1147, 1505, 1769, 1996
MspI CCGG 2 cut(s) 544, 1743
MspR9I CCNGG 7 cut(s) 233, 264, 545, 1538, 1809, 1853, 2136
Mva1269I GAATGC 3 cut(s) 433, 677, 738
MvaI CCWGG 6 cut(s) 233, 264, 1538, 1809, 1853, 2136
MvnI CGCG 1 cut(s) 44
MwoI GCNNNNNNNGC 6 cut(s) 244, 247, 554, 670, 683, 1088
NciI CCSGG 1 cut(s) 545
NdeI CATATG 2 cut(s) 1684, 1910
NdeII GATC 6 cut(s) 379, 408, 529, 1515, 1596, 1831
NlaIV GGNNCC 4 cut(s) 121, 237, 268, 913
NmuCI GTSAC 3 cut(s) 418, 743, 1811
NspV TTCGAA 2 cut(s) 201, 1645
PagI TCATGA 2 cut(s) 490, 1183
PceI AGGCCT 1 cut(s) 1427
PciSI GCTCTTC 1 cut(s) 42
PcsI WCGNNNNNNNCGW 1 cut(s) 24
PctI GAATGC 3 cut(s) 433, 677, 738
PdmI GAANNNNTTC 1 cut(s) 483
PflFI GACNNNGTC 2 cut(s) 23, 956
PfoI TCCNGGA 1 cut(s) 262
PleI GAGTC 4 cut(s) 512, 740, 1024, 1798
PpsI GAGTC 4 cut(s) 512, 740, 1024, 1798
Psp6I CCWGG 6 cut(s) 231, 262, 1536, 1807, 1851, 2134
PspEI GGTNACC 1 cut(s) 1811
PspFI CCCAGC 1 cut(s) 1519
PspGI CCWGG 6 cut(s) 231, 262, 1536, 1807, 1851, 2134
PspN4I GGNNCC 4 cut(s) 121, 237, 268, 913
PspPI GGNCC 3 cut(s) 546, 795, 912
PsrI GAACNNNNNNTAC 2 cut(s) 552, 584
PstNI CAGNNNCTG 2 cut(s) 976, 1954
PsuI RGATCY 3 cut(s) 408, 529, 1515
PsyI GACNNNGTC 2 cut(s) 23, 956
PvuII CAGCTG 3 cut(s) 1147, 1769, 1996
RsaI GTAC 1 cut(s) 1308
RsaNI GTAC 1 cut(s) 1307
RseI CAYNNNNRTG 2 cut(s) 924, 1188
SalI GTCGAC 1 cut(s) 26
SapI GCTCTTC 1 cut(s) 42
SaqAI TTAA 9 cut(s) 297, 936, 996, 1100, 1422, 1458, 1757, 1763, 2211
Sau3AI GATC 6 cut(s) 379, 408, 529, 1515, 1596, 1831
Sau96I GGNCC 3 cut(s) 546, 795, 912
SchI GAGTC 4 cut(s) 513, 740, 1025, 1798
ScrFI CCNGG 7 cut(s) 233, 264, 545, 1538, 1809, 1853, 2136
SduI GDGCHC 2 cut(s) 1840, 2205
SexAI ACCWGGT 1 cut(s) 231
SfaNI GCATC 4 cut(s) 108, 995, 1591, 1941
SfcI CTRYAG 2 cut(s) 968, 1665
SfuI TTCGAA 2 cut(s) 201, 1645
SinI GGWCC 1 cut(s) 912
SmiI ATTTAAAT 1 cut(s) 2212
SmiMI CAYNNNNRTG 2 cut(s) 924, 1188
SmlI CTYRAG 2 cut(s) 898, 1038
SmoI CTYRAG 2 cut(s) 898, 1038
SseBI AGGCCT 1 cut(s) 1427
SsiI CCGC 9 cut(s) 14, 44, 108, 239, 245, 248, 251, 403, 1505
SspI AATATT 1 cut(s) 1785
SspMI CTAG 5 cut(s) 290, 603, 1349, 1571, 1883
StuI AGGCCT 1 cut(s) 1427
StyD4I CCNGG 7 cut(s) 231, 262, 543, 1536, 1807, 1851, 2134
StyI CCWWGG 1 cut(s) 2219
SwaI ATTTAAAT 1 cut(s) 2212
TaaI ACNGT 8 cut(s) 328, 1098, 1279, 1546, 1669, 1780, 1897, 2183
TaiI ACGT 2 cut(s) 27, 297
TaqI TCGA 7 cut(s) 27, 63, 201, 580, 1551, 1599, 1645
TaqII GACCGA 2 cut(s) 1141, 1852
TatI WGTACW 1 cut(s) 1306
TauI GCSGC 3 cut(s) 241, 250, 253
Tru1I TTAA 9 cut(s) 297, 936, 996, 1100, 1422, 1458, 1757, 1763, 2211
Tru9I TTAA 9 cut(s) 297, 936, 996, 1100, 1422, 1458, 1757, 1763, 2211
TscAI CASTG 7 cut(s) 121, 331, 1284, 1731, 1783, 2094, 2188
TseFI GTSAC 3 cut(s) 418, 743, 1811
TseI GCWGC 8 cut(s) 362, 395, 554, 661, 1144, 1721, 1769, 1996
Tsp45I GTSAC 3 cut(s) 418, 743, 1811
TspRI CASTG 7 cut(s) 121, 331, 1284, 1731, 1783, 2094, 2188
Tth111I GACNNNGTC 2 cut(s) 23, 956
VpaK11BI GGWCC 1 cut(s) 912
XapI RAATTY 7 cut(s) 34, 217, 332, 368, 1460, 1969, 2207
XbaI TCTAGA 1 cut(s) 289
XmiI GTMKAC 5 cut(s) 27, 303, 1170, 1660, 1872
XmnI GAANNNNTTC 1 cut(s) 483
XspI CTAG 5 cut(s) 290, 603, 1349, 1571, 1883
ZraI GACGTC 1 cut(s) 25
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.