Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0003981

Physical Location & Seq

Genomic Coordinates Reverse (-)

12989062 .. 12995082

Gene Structure 6021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2742 bp

ATGAGGCCTAGTTCGAGGCACTGTGCGGTGGCTCGTCTGCCTGCCTCACCAAGCTTGGGTGGTGCTGCTTCTGAAGCGAATGCTCCAAATGGGTATGTGGAAAATGGCGGCAACTCAGTTTCCATGGAGATGGGGTTTCCGACTTCAAGCAAGTCATTGAGCTTTGCTCCTCGGCCTGGTTATGGACAAGTTGGGATCAAGTGTGTTGTGAAGGCCAACCATTTCTTTGCAGAGTTACCAGAGAAGGACTTGAACCATTATGATGTTAGAATTACTCCCGAAGTTGCATCGACAGCTGTGAACAGAGCTATAATGGCAGAACTGGTGAGGTTGTACAAGGAATCTGACTTAGGAATGAGACTGCCTGCTTATGATGGTAGGAAGAGTCTGTACACTGCTGGTGAGCTGCCCTTTGCTTGGAAGGAGTTCAATATTAAGCTTGTTGATGAACAGGATGGAATCGTTGGCCGAACAAGAGAAAGAGTATATAATGTGGTGATTAAATTTGTTGCACGAGCAGACATGCATCATCTGGGTCAGTTTCTGGTCGGTAAGTGTGCTGATGCTCCACAAGAAGCGCTCCAAATTCTTGACATTGTATTAAGAGAGCTCTCGAACAAGAGGTACTGCCCCATCGGGAGATCCTTCTTTTCACCTGATATCAGAACACCACAACGGCTTGGTGAAGGGTTGGAATCATGGTGCGGCTTTTATCAAAGTATAAGACCTACCCAAATGGGTCTTTCCCTCAATATTGATATGGCTTCAGCTGCATTTATTGAGCCTCTCCCTGTAATAGAGTTTGTAGCGCAGCTTCTAGGCAAAGATGTATTGTCTAGGACATTGTCTGATGCTGATCGTGTAAAGATTAAAAAGGCTCTTAGAGGTGTGAAAGTTGAAGTTACACACAGAGGGAGTGTTCGAAGAAAGTATCGAGTTTCAGGATTGACATCTCAACCTACAAGAGAGCTAGTGTTTCCTGTTGATGAGAACTTGACCATGAAGTCCGTAATTGAATACTTCCAGGAGATGTATGGGTTCACCATTCAACACGGGCATCTTCCTTGCCTTCAAGTTGGTAATCAGAAGAAGGCAAACTATTTACCCATGGAGGCCTGCAAAATTGTTGAGGGGCAACGGTATACAAAAAGGTTGAATGAGAAGCAAATTACTGCTCTCTTAAAGGTTACATGTCAAAGACCTAGGGATCGTGAAAATGACATCCTGCAGACTGTTCAACACAATGCTTATGACCAAGATCCTTACGCGAAGGAGTTTGGAATCAAAATCAGTGAAAAACTAGCTTCGGTCGAAGCTCGAATTCTTCCTGCGCCTTGGCTGAAGTATCATGAAACCGGAAAAGAAAAGAATTGTTTGCCTCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACCGTCAGCCGGTGGGCTTGTATTAATTTTTCACGGGGTGTGCAAGAGAGTGTCGCGCGTGGGTTTTGCAGTGAACTTGCACAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGAACCTGTAATTCCAATCCACAATGCTAGGCCTGAGCAAGTAGAGAAAGCTTTGAAGCATGTTTATCATGCATCCATGAGCAAGACCAAAGGAAAAGATTTAGAGCTCTTGTTAGCCATTTTGCCTGACAACAACGGGTCCCTGTATGGTGATATCAAGCGAATATGTGAAACAGATCTCGGTTTAATATCACAATGCTGTCTCACAAAGTATGTTTTCAAGATCAGCAAACAGTACTTGGCTAATGTCTCCCTAAAGATAAATGTTAAGATGGGTGGCAGAAACACAGTTCTTTTGGATGCTATCAGCTGCAGGATACCTTTGGTCAGTGATATTCCAACCATAATCTTCGGAGCCGATGTGACTCACCCTGAAAATGGAGAAGATTCCAGTCCCTCAATTGCTGCTGTCGTAGCTTCCCAGGACTGGCCCGAAGTGACCAAGTATGCTGGATTAGTTTGTGCTCAAGCTCACAGACAAGAACTCATACAAGATTTGTATAAAACATGGCAAGACCCAGTTCGTGGCACGGTCAGCGGTGGCATGATCCGGGATCTTCTGGTTTCCTTTAGGAAAGCAACAGGACAGAAGCCACTAAGGATTATATTTTACAGGGATGGCGTAAGTGAAGGTCAATTTTATCAAGTCTTACTATATGAGCTTGATGCAATCCGGAAGGCGTGTGCTTCTCTGGAACCAAACTATCAACCACCAGTGACTTTCATTGTAGTTCAAAAACGGCATCACACACGATTATTTGCTAATAACCATAGGGACAGGAGCAGCATAGACAAGAGTGGGAACATATTACCTGGCACCGTGGTTGATACCAAGATTTGTCATCCAACCGAACATGATTTTTATCTCTGCAGTCATGCTGGTATTCAGGGGACAAGTCGCCCAGCTCACTACCATGTTCTCTGGGATGAGAATAACTTTACTGCTGATGGAATCCAGTCATTGACAAACAACCTTTGTTACACATATGCAAGGTGCACGCGCTCCGTCTCTGTTGTACCTCCGGCATATTATGCACATTTGGCTGCTTTCCGTGCTCGATTCTATCTGGAGCCAGATATCCAAGAGAATGGTTCTACTGGTCACACTGCTAAGGGTACACGCGCTACTGGAGAGTCTGGAGTCCGACCGTTACCAGCCTTGAAGGAGAATGTAAAGAGAGTAATGTTTTATTGTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0002252 GO:0002376 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0006139 GO:0006725 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009615 GO:0009987 GO:0010586 GO:0016070 GO:0019827 GO:0032501 GO:0032502 GO:0034641 GO:0034660 GO:0035019 GO:0035198 GO:0043170 GO:0043207 GO:0044237 GO:0044238 GO:0046483 GO:0048509 GO:0050789 GO:0050793 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0061980 GO:0065007 GO:0071704 GO:0090304 GO:0097159 GO:0098542 GO:0098727 GO:1901360 GO:1901363 GO:1902183

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ArgoL1 ArgoL2 ArgoMid ArgoN PAZ Piwi

Protein Analysis

914

Amino Acids

102.23

Weight (kDa)

8.98

Isoelectric Point (pI)

42.14

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ArgoN	PF16486	67 - 201	5.3e-33	N-terminal domain of argonaute
ArgoL1	PF08699	211 - 261	4.8e-19	Argonaute linker 1 domain
PAZ	PF02170	285 - 393	2.1e-28	PAZ domain
ArgoL2	PF16488	403 - 449	9.3e-17	Argonaute linker 2 domain
ArgoMid	PF16487	460 - 537	3.8e-13	Mid domain of argonaute
Piwi	PF02171	552 - 870	1.4e-115	Piwi domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0003981)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G43810 AT5G43810 AT5G43810 AT5G43810
fragaria_vesca	FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630 FvH4_4g01630
malus_domestica	MD13G1201400.v1.1 MD16G1201200.v1.1
prunus_persica	Prupe.1G022900_v2.0.a1 Prupe.1G022900_v2.0.a1
pyrus_communis	pycom13g17460 pycom16g16970
rosa_chinensis	RchiOBHm_Chr4g0388221 RchiOBHm_Chr4g0388231
rosa_laevigata	RLG00000010073
rosa_roxburghii	Rroxscaffold_5G00334710
rosa_rugosa	Rorug03G0316100 Rorug03G0316200 Rorug03G0316300 Rorug03G0316300 Rorug03G0316300 Rorug03G0316300 Rorug03G0316400
rosa_samantha	Rh4AG021700 Rh4BG015800 Rh4CG021900 Rh4DG016600
rosa_wichuraiana	Rw4G001420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1003
AccB1I	GGYRCC	1 cut(s)	2360
AccB7I	CCANNNNNTGG	1 cut(s)	2069
AccI	GTMKAC	1 cut(s)	1142
AccII	CGCG	5 cut(s)	1268, 1484, 1486, 2545, 2667
AccIII	TCCGGA	1 cut(s)	2217
AciI	CCGC	4 cut(s)	26, 108, 705, 2082
AclWI	GGATC	6 cut(s)	203, 636, 1215, 1253, 2086, 2106
AcoI	YGGCCR	1 cut(s)	466
AcsI	RAATTY	4 cut(s)	503, 585, 1320, 1535
AcuI	CTGAAG	3 cut(s)	93, 750, 1361
AdeI	CACNNNGTG	1 cut(s)	1466
AfaI	GTAC	6 cut(s)	335, 392, 626, 1781, 2562, 2662
AfeI	AGCGCT	1 cut(s)	579
AfiI	CCNNNNNNNGG	9 cut(s)	56, 176, 182, 417, 1385, 1437, 1922, 1971, 2069
AflIII	ACRYGT	1 cut(s)	1190
AjnI	CCWGG	4 cut(s)	175, 1023, 1965, 2356
AleI	CACNNNNGTG	1 cut(s)	1513
Alw21I	GWGCWC	5 cut(s)	612, 1653, 2011, 2543, 2602
Alw26I	GTCTC	4 cut(s)	352, 1751, 1798, 2557
Alw44I	GTGCAC	1 cut(s)	2539
AlwI	GGATC	6 cut(s)	203, 636, 1215, 1253, 2086, 2106
AlwNI	CAGNNNCTG	2 cut(s)	544, 1550
Aor13HI	TCCGGA	1 cut(s)	2217
Aor51HI	AGCGCT	1 cut(s)	579
AoxI	GGCC	7 cut(s)	5, 173, 213, 466, 1113, 1574, 1973
ApaLI	GTGCAC	1 cut(s)	2539
ApeKI	GCWGC	8 cut(s)	65, 406, 770, 811, 1854, 1949, 2328, 2588
ApoI	RAATTY	4 cut(s)	503, 585, 1320, 1535
AseI	ATTAAT	2 cut(s)	1419, 1452
Asp700I	GAANNNNTTC	1 cut(s)	425
AspA2I	CCTAGG	1 cut(s)	1202
AspLEI	GCGC	6 cut(s)	580, 811, 1333, 1486, 2547, 2669
AspS9I	GGNCC	2 cut(s)	1683, 1974
AsuC2I	CCSGG	1 cut(s)	2096
AsuHPI	GGTGA	9 cut(s)	39, 337, 413, 508, 645, 695, 1033, 1706, 1904
AsuII	TTCGAA	1 cut(s)	922
AvaII	GGWCC	1 cut(s)	1683
AvrII	CCTAGG	1 cut(s)	1202
BaeGI	GKGCMC	1 cut(s)	2543
BanI	GGYRCC	1 cut(s)	2360
BanII	GRGCYC	2 cut(s)	612, 1653
BarI	GAAGNNNNNNTAC	4 cut(s)	374, 406, 798, 830
BauI	CACGAG	1 cut(s)	513
Bbv12I	GWGCWC	5 cut(s)	612, 1653, 2011, 2543, 2602
BbvI	GCAGC	8 cut(s)	52, 393, 757, 823, 1841, 1936, 2340, 2575
BccI	CCATC	7 cut(s)	124, 368, 449, 641, 1810, 2156, 2486
BceAI	ACGGC	2 cut(s)	692, 2300
BciT130I	CCWGG	4 cut(s)	177, 1025, 1967, 2358
BciVI	GTATCC	1 cut(s)	1854
BcnI	CCSGG	1 cut(s)	2096
BcoDI	GTCTC	4 cut(s)	352, 1751, 1798, 2557
BfaI	CTAG	7 cut(s)	9, 818, 837, 971, 1203, 1301, 1572
BfmI	CTRYAG	3 cut(s)	1226, 1855, 2413
BfoI	RGCGCY	1 cut(s)	581
BfuI	GTATCC	1 cut(s)	1854
BglII	AGATCT	1 cut(s)	1720
BlnI	CCTAGG	1 cut(s)	1202
BmcAI	AGTACT	1 cut(s)	1781
Bme1390I	CCNGG	5 cut(s)	177, 1025, 1967, 2096, 2358
Bme18I	GGWCC	1 cut(s)	1683
BmgT120I	GGNCC	2 cut(s)	1683, 1974
BmiI	GGNNCC	6 cut(s)	1684, 1685, 1900, 2241, 2362, 2616
BmrFI	CCNGG	5 cut(s)	177, 1025, 1967, 2096, 2358
BmrI	ACTGGG	1 cut(s)	2057
BmsI	GCATC	9 cut(s)	296, 535, 553, 841, 1066, 1625, 1834, 2200, 2296
BmuI	ACTGGG	1 cut(s)	2057
BplI	GAGNNNNNCTC	2 cut(s)	151, 183
BpmI	CTGGAG	3 cut(s)	2633, 2694, 2703
Bpu10I	CCTNAGC	2 cut(s)	1578, 2655
Bpu14I	TTCGAA	1 cut(s)	922
BpuEI	CTTGAG	2 cut(s)	1365, 1995
BpuMI	CCSGG	1 cut(s)	2096
BsaBI	GATNNNNATC	3 cut(s)	855, 949, 2406
BsaJI	CCNNGG	7 cut(s)	123, 170, 1107, 1202, 1334, 1965, 2364
BsaWI	WCCGGW	2 cut(s)	1355, 2217
BsaXI	ACNNNNNCTCC	4 cut(s)	119, 149, 1890, 1920
Bsc4I	CCNNNNNNNGG	9 cut(s)	56, 176, 182, 417, 1385, 1437, 1922, 1971, 2069
Bse118I	RCCGGY	1 cut(s)	1437
Bse1I	ACTGG	8 cut(s)	327, 1935, 1976, 2063, 2258, 2500, 2647, 2677
Bse8I	GATNNNNATC	3 cut(s)	855, 949, 2406
BseAI	TCCGGA	1 cut(s)	2217
BseBI	CCWGG	4 cut(s)	177, 1025, 1967, 2358
BseDI	CCNNGG	7 cut(s)	123, 170, 1107, 1202, 1334, 1965, 2364
BseGI	GGATG	7 cut(s)	460, 1221, 1616, 1849, 2167, 2386, 2476
BseJI	GATNNNNATC	3 cut(s)	855, 949, 2406
BseLI	CCNNNNNNNGG	9 cut(s)	56, 176, 182, 417, 1385, 1437, 1922, 1971, 2069
BseMII	CTCAG	2 cut(s)	129, 1569
BseNI	ACTGG	8 cut(s)	327, 1935, 1976, 2063, 2258, 2500, 2647, 2677
BseRI	GAGGAG	1 cut(s)	159
BseSI	GKGCMC	1 cut(s)	2543
BseXI	GCAGC	8 cut(s)	52, 393, 757, 823, 1841, 1936, 2340, 2575
BseYI	CCCAGC	1 cut(s)	2446
Bsh1236I	CGCG	5 cut(s)	1268, 1484, 1486, 2545, 2667
Bsh1285I	CGRYCG	2 cut(s)	1311, 2693
BshFI	GGCC	7 cut(s)	7, 175, 215, 468, 1115, 1576, 1975
BshNI	GGYRCC	1 cut(s)	2360
BsiEI	CGRYCG	2 cut(s)	1311, 2693
BsiHKAI	GWGCWC	5 cut(s)	612, 1653, 2011, 2543, 2602
BsiSI	CCGG	5 cut(s)	1356, 1438, 2095, 2218, 2567
BslFI	GGGAC	4 cut(s)	1669, 1923, 2333, 2449
BslI	CCNNNNNNNGG	9 cut(s)	56, 176, 182, 417, 1385, 1437, 1922, 1971, 2069
BsmAI	GTCTC	4 cut(s)	352, 1751, 1798, 2557
BsmBI	CGTCTC	1 cut(s)	2557
BsmFI	GGGAC	4 cut(s)	1669, 1923, 2333, 2449
BsmI	GAATGC	1 cut(s)	85
BsnI	GGCC	7 cut(s)	7, 175, 215, 468, 1115, 1576, 1975
Bsp119I	TTCGAA	1 cut(s)	922
Bsp1286I	GDGCHC	5 cut(s)	612, 1653, 2011, 2543, 2602
Bsp13I	TCCGGA	1 cut(s)	2217
Bsp1407I	TGTACA	2 cut(s)	333, 390
Bsp143I	GATC	9 cut(s)	195, 641, 856, 1207, 1258, 1720, 1767, 2091, 2098
Bsp19I	CCATGG	2 cut(s)	123, 1107
BspACI	CCGC	4 cut(s)	26, 108, 705, 2082
BspANI	GGCC	7 cut(s)	7, 175, 215, 468, 1115, 1576, 1975
BspCNI	CTCAG	2 cut(s)	128, 1570
BspEI	TCCGGA	1 cut(s)	2217
BspFNI	CGCG	5 cut(s)	1268, 1484, 1486, 2545, 2667
BspHI	TCATGA	1 cut(s)	1348
BspLI	GGNNCC	6 cut(s)	1684, 1685, 1900, 2241, 2362, 2616
BspMAI	CTGCAG	3 cut(s)	1230, 1859, 2417
BspPI	GGATC	6 cut(s)	203, 636, 1215, 1253, 2086, 2106
BspT104I	TTCGAA	1 cut(s)	922
BspT107I	GGYRCC	1 cut(s)	2360
BsrFI	RCCGGY	1 cut(s)	1437
BsrGI	TGTACA	2 cut(s)	333, 390
BsrI	ACTGG	8 cut(s)	327, 1935, 1976, 2063, 2258, 2500, 2647, 2677
BssAI	RCCGGY	1 cut(s)	1437
BssECI	CCNNGG	7 cut(s)	123, 170, 1107, 1202, 1334, 1965, 2364
BssMI	GATC	9 cut(s)	195, 641, 856, 1207, 1258, 1720, 1767, 2091, 2098
BssNAI	GTATAC	1 cut(s)	1143
BssSI	CACGAG	1 cut(s)	513
BssT1I	CCWWGG	4 cut(s)	123, 1107, 1202, 1334
Bst1107I	GTATAC	1 cut(s)	1143
Bst2BI	CACGAG	1 cut(s)	513
Bst2UI	CCWGG	4 cut(s)	177, 1025, 1967, 2358
Bst4CI	ACNGT	9 cut(s)	23, 1140, 1234, 1432, 1779, 1834, 2077, 2365, 2694
Bst6I	CTCTTC	1 cut(s)	377
BstAPI	GCANNNNNTGC	1 cut(s)	2576
BstAUI	TGTACA	2 cut(s)	333, 390
BstBI	TTCGAA	1 cut(s)	922
BstC8I	GCNNGC	4 cut(s)	42, 366, 1117, 2543
BstDEI	CTNAG	6 cut(s)	115, 349, 881, 1578, 2141, 2655
BstDSI	CCRYGG	3 cut(s)	123, 1107, 2364
BstF5I	GGATG	7 cut(s)	460, 1221, 1616, 1849, 2167, 2386, 2476
BstFNI	CGCG	5 cut(s)	1268, 1484, 1486, 2545, 2667
BstH2I	RGCGCY	1 cut(s)	581
BstHHI	GCGC	6 cut(s)	580, 811, 1333, 1486, 2547, 2669
BstKTI	GATC	9 cut(s)	198, 644, 859, 1210, 1261, 1723, 1770, 2094, 2101
BstMAI	GTCTC	4 cut(s)	352, 1751, 1798, 2557
BstMBI	GATC	9 cut(s)	195, 641, 856, 1207, 1258, 1720, 1767, 2091, 2098
BstMCI	CGRYCG	2 cut(s)	1311, 2693
BstMWI	GCNNNNNNNGC	9 cut(s)	74, 293, 314, 770, 1958, 2079, 2576, 2585, 2597
BstNI	CCWGG	4 cut(s)	177, 1025, 1967, 2358
BstNSI	RCATGY	3 cut(s)	526, 1194, 1607
BstSCI	CCNGG	5 cut(s)	175, 1023, 1965, 2094, 2356
BstSFI	CTRYAG	3 cut(s)	1226, 1855, 2413
BstSLI	GKGCMC	1 cut(s)	2543
BstUI	CGCG	5 cut(s)	1268, 1484, 1486, 2545, 2667
BstV1I	GCAGC	8 cut(s)	52, 393, 757, 823, 1841, 1936, 2340, 2575
BstX2I	RGATCY	4 cut(s)	641, 1258, 1720, 2098
BstXI	CCANNNNNNTGG	2 cut(s)	130, 2633
BstYI	RGATCY	4 cut(s)	641, 1258, 1720, 2098
BstZ17I	GTATAC	1 cut(s)	1143
BsuI	GTATCC	1 cut(s)	1854
BsuRI	GGCC	7 cut(s)	7, 175, 215, 468, 1115, 1576, 1975
BtgI	CCRYGG	3 cut(s)	123, 1107, 2364
BtsCI	GGATG	7 cut(s)	460, 1221, 1616, 1849, 2167, 2386, 2476
BtsI	GCAGTG	3 cut(s)	393, 1504, 2649
BtsIMutI	CAGTG	8 cut(s)	19, 393, 1297, 1397, 1504, 1879, 2265, 2649
Cac8I	GCNNGC	4 cut(s)	42, 366, 1117, 2543
CaiI	CAGNNNCTG	2 cut(s)	544, 1550
CciI	TCATGA	1 cut(s)	1348
CfoI	GCGC	6 cut(s)	580, 811, 1333, 1486, 2547, 2669
Cfr10I	RCCGGY	1 cut(s)	1437
Cfr13I	GGNCC	2 cut(s)	1683, 1974
Csp6I	GTAC	6 cut(s)	334, 391, 625, 1780, 2561, 2661
CviQI	GTAC	6 cut(s)	334, 391, 625, 1780, 2561, 2661
DdeI	CTNAG	6 cut(s)	115, 349, 881, 1578, 2141, 2655
DpnI	GATC	9 cut(s)	197, 643, 858, 1209, 1260, 1722, 1769, 2093, 2100
DpnII	GATC	9 cut(s)	195, 641, 856, 1207, 1258, 1720, 1767, 2091, 2098
DraIII	CACNNNGTG	1 cut(s)	1466
DrdI	GACNNNNNNGTC	1 cut(s)	1003
DseDI	GACNNNNNNGTC	1 cut(s)	1003
EaeI	YGGCCR	1 cut(s)	466
Eam1104I	CTCTTC	1 cut(s)	377
EarI	CTCTTC	1 cut(s)	377
Ecl136II	GAGCTC	2 cut(s)	610, 1651
Eco130I	CCWWGG	4 cut(s)	123, 1107, 1202, 1334
Eco147I	AGGCCT	3 cut(s)	7, 1115, 1576
Eco24I	GRGCYC	2 cut(s)	612, 1653
Eco32I	GATATC	3 cut(s)	661, 1699, 2623
Eco47I	GGWCC	1 cut(s)	1683
Eco47III	AGCGCT	1 cut(s)	579
Eco53kI	GAGCTC	2 cut(s)	610, 1651
Eco57I	CTGAAG	3 cut(s)	93, 750, 1361
EcoICRI	GAGCTC	2 cut(s)	610, 1651
EcoO109I	RGGNCCY	1 cut(s)	1683
EcoRI	GAATTC	1 cut(s)	1320
EcoRII	CCWGG	4 cut(s)	175, 1023, 1965, 2356
EcoRV	GATATC	3 cut(s)	661, 1699, 2623
EcoT14I	CCWWGG	4 cut(s)	123, 1107, 1202, 1334
EcoT22I	ATGCAT	2 cut(s)	528, 1618
EcoT38I	GRGCYC	2 cut(s)	612, 1653
ErhI	CCWWGG	4 cut(s)	123, 1107, 1202, 1334
Esp3I	CGTCTC	1 cut(s)	2557
FaqI	GGGAC	4 cut(s)	1669, 1923, 2333, 2449
FauNDI	CATATG	1 cut(s)	2530
FblI	GTMKAC	1 cut(s)	1142
FokI	GGATG	7 cut(s)	467, 1208, 1603, 1856, 2174, 2373, 2483
FriOI	GRGCYC	2 cut(s)	612, 1653
FspBI	CTAG	7 cut(s)	9, 818, 837, 971, 1203, 1301, 1572
GlaI	GCGC	6 cut(s)	579, 810, 1332, 1485, 2546, 2668
GsaI	CCCAGC	1 cut(s)	2450
GsuI	CTGGAG	3 cut(s)	2633, 2694, 2703
HaeII	RGCGCY	1 cut(s)	581
HaeIII	GGCC	7 cut(s)	7, 175, 215, 468, 1115, 1576, 1975
HapII	CCGG	5 cut(s)	1356, 1438, 2095, 2218, 2567
HhaI	GCGC	6 cut(s)	580, 811, 1333, 1486, 2547, 2669
Hin6I	GCGC	6 cut(s)	578, 809, 1331, 1484, 2545, 2667
HinP1I	GCGC	6 cut(s)	578, 809, 1331, 1484, 2545, 2667
HindIII	AAGCTT	3 cut(s)	52, 437, 1593
HpaII	CCGG	5 cut(s)	1356, 1438, 2095, 2218, 2567
HphI	GGTGA	9 cut(s)	39, 337, 413, 508, 645, 695, 1033, 1706, 1904
Hpy166II	GTNNAC	7 cut(s)	301, 393, 1041, 1143, 1502, 2541, 2663
Hpy188I	TCNGA	8 cut(s)	73, 141, 346, 665, 850, 1086, 1898, 2690
Hpy8I	GTNNAC	7 cut(s)	301, 393, 1041, 1143, 1502, 2541, 2663
HpyCH4III	ACNGT	9 cut(s)	23, 1140, 1234, 1432, 1779, 1834, 2077, 2365, 2694
HpyF10VI	GCNNNNNNNGC	9 cut(s)	74, 293, 314, 770, 1958, 2079, 2576, 2585, 2597
HpyF3I	CTNAG	6 cut(s)	115, 349, 881, 1578, 2141, 2655
HspAI	GCGC	6 cut(s)	578, 809, 1331, 1484, 2545, 2667
KflI	GGGWCCC	1 cut(s)	1683
Kpn2I	TCCGGA	1 cut(s)	2217
Kzo9I	GATC	9 cut(s)	195, 641, 856, 1207, 1258, 1720, 1767, 2091, 2098
LmnI	GCTCC	8 cut(s)	88, 172, 571, 585, 1898, 2325, 2552, 2614
Lsp1109I	GCAGC	8 cut(s)	52, 393, 757, 823, 1841, 1936, 2340, 2575
LweI	GCATC	9 cut(s)	296, 535, 553, 841, 1066, 1625, 1834, 2200, 2296
MaeI	CTAG	7 cut(s)	9, 818, 837, 971, 1203, 1301, 1572
MaeIII	GTNAC	9 cut(s)	234, 901, 1186, 1906, 1981, 2260, 2522, 2645, 2694
MalI	GATC	9 cut(s)	197, 643, 858, 1209, 1260, 1722, 1769, 2093, 2100
MboI	GATC	9 cut(s)	195, 641, 856, 1207, 1258, 1720, 1767, 2091, 2098
MboII	GAAGA	8 cut(s)	394, 936, 1052, 1099, 1316, 1885, 1940, 2093
MfeI	CAATTG	1 cut(s)	1944
MflI	RGATCY	4 cut(s)	641, 1258, 1720, 2098
MhlI	GDGCHC	5 cut(s)	612, 1653, 2011, 2543, 2602
MlyI	GAGTC	4 cut(s)	394, 1903, 2687, 2694
MmeI	TCCRAC	5 cut(s)	164, 672, 1907, 2414, 2713
Mph1103I	ATGCAT	2 cut(s)	528, 1618
MroI	TCCGGA	1 cut(s)	2217
MroXI	GAANNNNTTC	1 cut(s)	425
MslI	CAYNNNNRTG	4 cut(s)	128, 261, 1513, 2457
MspA1I	CMGCKG	4 cut(s)	296, 770, 1854, 2082
MspI	CCGG	5 cut(s)	1356, 1438, 2095, 2218, 2567
MspR9I	CCNGG	5 cut(s)	177, 1025, 1967, 2096, 2358
MunI	CAATTG	1 cut(s)	1944
Mva1269I	GAATGC	1 cut(s)	85
MvaI	CCWGG	4 cut(s)	177, 1025, 1967, 2358
MvnI	CGCG	5 cut(s)	1268, 1484, 1486, 2545, 2667
MwoI	GCNNNNNNNGC	9 cut(s)	74, 293, 314, 770, 1958, 2079, 2576, 2585, 2597
NciI	CCSGG	1 cut(s)	2096
NcoI	CCATGG	2 cut(s)	123, 1107
NdeI	CATATG	1 cut(s)	2530
NdeII	GATC	9 cut(s)	195, 641, 856, 1207, 1258, 1720, 1767, 2091, 2098
NlaIV	GGNNCC	6 cut(s)	1684, 1685, 1900, 2241, 2362, 2616
NmeAIII	GCCGAG	1 cut(s)	151
NmuCI	GTSAC	4 cut(s)	1906, 1981, 2260, 2645
NsiI	ATGCAT	2 cut(s)	528, 1618
NspI	RCATGY	3 cut(s)	526, 1194, 1607
NspV	TTCGAA	1 cut(s)	922
OliI	CACNNNNGTG	1 cut(s)	1513
PagI	TCATGA	1 cut(s)	1348
PceI	AGGCCT	3 cut(s)	7, 1115, 1576
PciI	ACATGT	1 cut(s)	1190
PctI	GAATGC	1 cut(s)	85
PdmI	GAANNNNTTC	1 cut(s)	425
PfeI	GAWTC	7 cut(s)	341, 459, 695, 1281, 1931, 2496, 2604
PflFI	GACNNNGTC	1 cut(s)	844
PflMI	CCANNNNNTGG	1 cut(s)	2069
PfoI	TCCNGGA	2 cut(s)	1023, 2094
PleI	GAGTC	4 cut(s)	393, 1903, 2686, 2693
PpsI	GAGTC	4 cut(s)	393, 1903, 2686, 2693
PpuMI	RGGWCCY	1 cut(s)	1683
PscI	ACATGT	1 cut(s)	1190
PshBI	ATTAAT	2 cut(s)	1419, 1452
Psp124BI	GAGCTC	2 cut(s)	612, 1653
Psp5II	RGGWCCY	1 cut(s)	1683
Psp6I	CCWGG	4 cut(s)	175, 1023, 1965, 2356
PspFI	CCCAGC	1 cut(s)	2446
PspGI	CCWGG	4 cut(s)	175, 1023, 1965, 2356
PspN4I	GGNNCC	6 cut(s)	1684, 1685, 1900, 2241, 2362, 2616
PspPI	GGNCC	2 cut(s)	1683, 1974
PspPPI	RGGWCCY	1 cut(s)	1683
PsrI	GAACNNNNNNTAC	2 cut(s)	608, 640
PstI	CTGCAG	3 cut(s)	1230, 1859, 2417
PstNI	CAGNNNCTG	2 cut(s)	544, 1550
PsuI	RGATCY	4 cut(s)	641, 1258, 1720, 2098
PsyI	GACNNNGTC	1 cut(s)	844
PvuII	CAGCTG	3 cut(s)	296, 770, 1854
RsaI	GTAC	6 cut(s)	335, 392, 626, 1781, 2562, 2662
RsaNI	GTAC	6 cut(s)	334, 391, 625, 1780, 2561, 2661
RseI	CAYNNNNRTG	4 cut(s)	128, 261, 1513, 2457
SacI	GAGCTC	2 cut(s)	612, 1653
Sau3AI	GATC	9 cut(s)	195, 641, 856, 1207, 1258, 1720, 1767, 2091, 2098
Sau96I	GGNCC	2 cut(s)	1683, 1974
ScaI	AGTACT	1 cut(s)	1781
SchI	GAGTC	4 cut(s)	394, 1903, 2687, 2694
ScrFI	CCNGG	5 cut(s)	177, 1025, 1967, 2096, 2358
SduI	GDGCHC	5 cut(s)	612, 1653, 2011, 2543, 2602
SfaNI	GCATC	9 cut(s)	296, 535, 553, 841, 1066, 1625, 1834, 2200, 2296
SfcI	CTRYAG	3 cut(s)	1226, 1855, 2413
SfuI	TTCGAA	1 cut(s)	922
SinI	GGWCC	1 cut(s)	1683
SmiMI	CAYNNNNRTG	4 cut(s)	128, 261, 1513, 2457
SmlI	CTYRAG	2 cut(s)	1380, 2010
SmoI	CTYRAG	2 cut(s)	1380, 2010
SseBI	AGGCCT	3 cut(s)	7, 1115, 1576
SsiI	CCGC	4 cut(s)	26, 108, 705, 2082
SspI	AATATT	2 cut(s)	433, 754
SspMI	CTAG	7 cut(s)	9, 818, 837, 971, 1203, 1301, 1572
SstI	GAGCTC	2 cut(s)	612, 1653
StuI	AGGCCT	3 cut(s)	7, 1115, 1576
StyD4I	CCNGG	5 cut(s)	175, 1023, 1965, 2094, 2356
StyI	CCWWGG	4 cut(s)	123, 1107, 1202, 1334
TaaI	ACNGT	9 cut(s)	23, 1140, 1234, 1432, 1779, 1834, 2077, 2365, 2694
TaqI	TCGA	8 cut(s)	14, 290, 614, 922, 934, 1311, 1318, 2602
TaqII	GACCGA	1 cut(s)	1297
TatI	WGTACW	3 cut(s)	333, 390, 1779
TauI	GCSGC	2 cut(s)	111, 708
TfiI	GAWTC	7 cut(s)	341, 459, 695, 1281, 1931, 2496, 2604
TscAI	CASTG	8 cut(s)	26, 400, 1297, 1397, 1504, 1879, 2265, 2656
TseFI	GTSAC	4 cut(s)	1906, 1981, 2260, 2645
TseI	GCWGC	8 cut(s)	65, 406, 770, 811, 1854, 1949, 2328, 2588
Tsp45I	GTSAC	4 cut(s)	1906, 1981, 2260, 2645
TspDTI	ATGAA	5 cut(s)	462, 1016, 1365, 1418, 2257
TspGWI	ACGGA	3 cut(s)	997, 2539, 2585
TspRI	CASTG	8 cut(s)	26, 400, 1297, 1397, 1504, 1879, 2265, 2656
Tth111I	GACNNNGTC	1 cut(s)	844
Van91I	CCANNNNNTGG	1 cut(s)	2069
VneI	GTGCAC	1 cut(s)	2539
VpaK11BI	GGWCC	1 cut(s)	1683
VspI	ATTAAT	2 cut(s)	1419, 1452
XapI	RAATTY	4 cut(s)	503, 585, 1320, 1535
XceI	RCATGY	3 cut(s)	526, 1194, 1607
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1031
XmaJI	CCTAGG	1 cut(s)	1202
XmiI	GTMKAC	1 cut(s)	1142
XmnI	GAANNNNTTC	1 cut(s)	425
XspI	CTAG	7 cut(s)	9, 818, 837, 971, 1203, 1301, 1572
ZrmI	AGTACT	1 cut(s)	1781
Zsp2I	ATGCAT	2 cut(s)	528, 1618

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.