pycom16g23480

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
24467881 .. 24469108
1228 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1086 bp
ATGGGCCTCCAAGGCGGGTGGAGCGCGGTGGCCGTCGGCTTGGTTGCGAAGCTCTGCGACTCCTGCAAGAACTTGGCGGCGGCCTTGTTCTGCAGAGTCGACTTGGCCTTTCTCTGCCTGCCCTGCGACGCCAACAAGCTCACCACGCGCCACGAGTGCGTCTGGATGTGCGAGGTCTGCGACCAGGCCCCTGCCGCTGTCACCTGCAAGGCGGACGCCGTCGCACTCTGCGTCGCCTACGACGCCGACATCCATTCTGCCAACCCCCTCGCCCAGCGCCACGAGCGGGTCCCGGTTGAGCCGTTTTACTACTCCGCCGAGTCTGTCACCGCCAAGTCAACAGCTGCTGCCCCCTTATCCATTGGGGCGGCCATCAACTACCTCGTCCCAAACGACGACGTTTTATCCAATACTAAAGACGTAGATAACGACCCCGCGTCGAACTGGCTGATCCCCAACCTGAATTTCAACTCGAAGCTCCAAATGGATATTGCTCCGGACATTACAAAATCCTCCGACGACCTCTTCTTCCTCGAAATGGATTTGCTGCTGGAGTTCAATTACCCCAACTCAATCCACACCATTTCGGGGCCAGGAACGGATAGTGTCATTCCAGTTCAAACTAACCCGATTCCACCTCCTTCGTTGAAGATGAACCATAACATATCGGGTCCCGCCGATCAAAATTGCTTCGACATGGACTTTTGCAGTAGCAAGTTCTCGTATTCCTTCAGCTATCCGACTCAGTCCCTCAGCCAAAGCATGTCGGAGTTGTTCCGGACCAAAACTCCCTATCCGATATATCGTATCCTTTCGGCCGAACCGCCTGTAACAGCGTTTCTGAACCGGGCAAAAAGCCAGCAACAACGTTTCAGAACCGGGCGATATATCGTACCCTTTTGGCCAGAAAGCCAGCAACAATGTTTCGAAACCCGGCGCACGGGTCTCGGCAACCCCTGCGAGTCAACCAGCGACTCAGCTCTGCGGACTGAACAGGGAGGCGAGGGTGCTAAGGTACAGGGAGAAGAGGAAGAACCGCAAGTTCCAGAAGACCATCCGATACGCTTCCCGGAAAGCGTATGCTGA

Protein Analysis

362

Amino Acids

39.68

Weight (kDa)

4.76

Isoelectric Point (pI)

50.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 212
Acc36I ACCTGC 1 cut(s) 212
AccBSI CCGCTC 1 cut(s) 286
AccI GTMKAC 1 cut(s) 99
AccII CGCG 3 cut(s) 26, 148, 437
AccIII TCCGGA 2 cut(s) 496, 777
AclI AACGTT 1 cut(s) 868
AclWI GGATC 1 cut(s) 445
AcoI YGGCCR 4 cut(s) 30, 369, 816, 902
AcsI RAATTY 1 cut(s) 463
AcuI CTGAAG 1 cut(s) 715
AcyI GRCGYC 3 cut(s) 129, 216, 243
AfaI GTAC 2 cut(s) 894, 1017
AfiI CCNNNNNNNGG 4 cut(s) 286, 538, 588, 940
AgsI TTSAA 4 cut(s) 469, 559, 620, 649
AhdI GACNNNNNGTC 1 cut(s) 436
AjnI CCWGG 2 cut(s) 183, 592
AjuI GAANNNNNNNTTGG 2 cut(s) 449, 481
AluBI AGCT 6 cut(s) 52, 139, 344, 478, 735, 980
AluI AGCT 6 cut(s) 52, 139, 344, 478, 735, 980
Alw26I GTCTC 1 cut(s) 950
AlwI GGATC 1 cut(s) 445
AlwNI CAGNNNCTG 1 cut(s) 347
Aor13HI TCCGGA 2 cut(s) 496, 777
AoxI GGCC 9 cut(s) 4, 30, 81, 105, 186, 369, 590, 816, 902
ApeKI GCWGC 3 cut(s) 344, 347, 547
ApoI RAATTY 1 cut(s) 463
AspLEI GCGC 4 cut(s) 26, 150, 279, 939
AspS9I GGNCC 6 cut(s) 4, 187, 289, 590, 671, 780
AsuC2I CCSGG 5 cut(s) 293, 848, 880, 934, 1070
AsuHPI GGTGA 3 cut(s) 133, 193, 319
AsuII TTCGAA 1 cut(s) 927
AvaII GGWCC 3 cut(s) 289, 671, 780
BalI TGGCCA 1 cut(s) 904
BauI CACGAG 2 cut(s) 152, 281
BbsI GAAGAC 1 cut(s) 1056
BbvCI CCTCAGC 1 cut(s) 752
BbvI GCAGC 3 cut(s) 331, 334, 534
BccI CCATC 2 cut(s) 380, 1062
BceAI ACGGC 3 cut(s) 17, 203, 286
BcgI CGANNNNNNTGC 2 cut(s) 928, 962
BciT130I CCWGG 2 cut(s) 185, 594
BciVI GTATCC 1 cut(s) 818
BcnI CCSGG 5 cut(s) 293, 848, 880, 934, 1070
BcoDI GTCTC 1 cut(s) 950
BfmI CTRYAG 1 cut(s) 91
BfoI RGCGCY 1 cut(s) 280
BfuAI ACCTGC 1 cut(s) 212
BfuI GTATCC 1 cut(s) 818
BglI GCCNNNNNGGC 1 cut(s) 12
BisI GCNGC 7 cut(s) 78, 81, 195, 345, 348, 369, 548
BlsI GCNGC 7 cut(s) 79, 82, 196, 346, 349, 370, 549
Bme1390I CCNGG 7 cut(s) 185, 293, 594, 848, 880, 934, 1070
Bme18I GGWCC 3 cut(s) 289, 671, 780
BmeRI GACNNNNNGTC 1 cut(s) 436
BmgT120I GGNCC 6 cut(s) 4, 187, 289, 590, 671, 780
BmiI GGNNCC 6 cut(s) 189, 290, 291, 591, 672, 673
BmrFI CCNGG 7 cut(s) 185, 293, 594, 848, 880, 934, 1070
BpiI GAAGAC 1 cut(s) 1056
BpmI CTGGAG 1 cut(s) 572
Bpu10I CCTNAGC 2 cut(s) 752, 1011
Bpu14I TTCGAA 1 cut(s) 927
BpuMI CCSGG 5 cut(s) 293, 848, 880, 934, 1070
BsaHI GRCGYC 3 cut(s) 129, 216, 243
BsaI GGTCTC 1 cut(s) 950
BsaJI CCNNGG 1 cut(s) 10
BsaWI WCCGGW 2 cut(s) 496, 777
BsaXI ACNNNNNCTCC 2 cut(s) 772, 802
Bsc4I CCNNNNNNNGG 4 cut(s) 286, 538, 588, 940
Bse1I ACTGG 2 cut(s) 449, 614
BseAI TCCGGA 2 cut(s) 496, 777
BseBI CCWGG 2 cut(s) 185, 594
BseDI CCNNGG 1 cut(s) 10
BseGI GGATG 3 cut(s) 171, 249, 1054
BseLI CCNNNNNNNGG 4 cut(s) 286, 538, 588, 940
BseMII CTCAG 3 cut(s) 758, 766, 990
BseNI ACTGG 2 cut(s) 449, 614
BseX3I CGGCCG 1 cut(s) 816
BseXI GCAGC 3 cut(s) 331, 334, 534
BseYI CCCAGC 1 cut(s) 273
Bsh1236I CGCG 3 cut(s) 26, 148, 437
Bsh1285I CGRYCG 1 cut(s) 819
BshFI GGCC 9 cut(s) 6, 32, 83, 107, 188, 371, 592, 818, 904
BsiEI CGRYCG 1 cut(s) 819
BsiSI CCGG 7 cut(s) 293, 497, 778, 847, 879, 934, 1070
BslFI GGGAC 4 cut(s) 275, 371, 657, 733
BslI CCNNNNNNNGG 4 cut(s) 286, 538, 588, 940
BsmAI GTCTC 1 cut(s) 950
BsmFI GGGAC 4 cut(s) 275, 371, 657, 733
BsnI GGCC 9 cut(s) 6, 32, 83, 107, 188, 371, 592, 818, 904
Bso31I GGTCTC 1 cut(s) 950
Bsp119I TTCGAA 1 cut(s) 927
Bsp13I TCCGGA 2 cut(s) 496, 777
Bsp143I GATC 2 cut(s) 450, 679
BspANI GGCC 9 cut(s) 6, 32, 83, 107, 188, 371, 592, 818, 904
BspCNI CTCAG 3 cut(s) 757, 765, 989
BspEI TCCGGA 2 cut(s) 496, 777
BspFNI CGCG 3 cut(s) 26, 148, 437
BspLI GGNNCC 6 cut(s) 189, 290, 291, 591, 672, 673
BspMAI CTGCAG 1 cut(s) 95
BspMI ACCTGC 1 cut(s) 212
BspPI GGATC 1 cut(s) 445
BspT104I TTCGAA 1 cut(s) 927
BspTNI GGTCTC 1 cut(s) 950
BsrBI CCGCTC 1 cut(s) 286
BsrI ACTGG 2 cut(s) 449, 614
BssECI CCNNGG 1 cut(s) 10
BssMI GATC 2 cut(s) 450, 679
BssNI GRCGYC 3 cut(s) 129, 216, 243
BssSI CACGAG 2 cut(s) 152, 281
BssT1I CCWWGG 1 cut(s) 10
Bst2BI CACGAG 2 cut(s) 152, 281
Bst2UI CCWGG 2 cut(s) 185, 594
Bst6I CTCTTC 2 cut(s) 530, 1020
BstACI GRCGYC 3 cut(s) 129, 216, 243
BstAPI GCANNNNNTGC 1 cut(s) 957
BstBI TTCGAA 1 cut(s) 927
BstC8I GCNNGC 3 cut(s) 119, 860, 914
BstDEI CTNAG 4 cut(s) 744, 752, 976, 1011
BstF5I GGATG 3 cut(s) 171, 249, 1054
BstFNI CGCG 3 cut(s) 26, 148, 437
BstH2I RGCGCY 1 cut(s) 280
BstHHI GCGC 4 cut(s) 26, 150, 279, 939
BstKTI GATC 2 cut(s) 453, 682
BstMAI GTCTC 1 cut(s) 950
BstMBI GATC 2 cut(s) 450, 679
BstMCI CGRYCG 1 cut(s) 819
BstNI CCWGG 2 cut(s) 185, 594
BstNSI RCATGY 1 cut(s) 766
BstSCI CCNGG 7 cut(s) 183, 291, 592, 846, 878, 932, 1068
BstSFI CTRYAG 1 cut(s) 91
BstUI CGCG 3 cut(s) 26, 148, 437
BstV1I GCAGC 3 cut(s) 331, 334, 534
BstV2I GAAGAC 1 cut(s) 1056
BstZI CGGCCG 1 cut(s) 816
BsuI GTATCC 1 cut(s) 818
BsuRI GGCC 9 cut(s) 6, 32, 83, 107, 188, 371, 592, 818, 904
BtsCI GGATG 3 cut(s) 171, 249, 1054
BveI ACCTGC 1 cut(s) 212
Cac8I GCNNGC 3 cut(s) 119, 860, 914
CaiI CAGNNNCTG 1 cut(s) 347
CfoI GCGC 4 cut(s) 26, 150, 279, 939
Cfr13I GGNCC 6 cut(s) 4, 187, 289, 590, 671, 780
CseI GACGC 6 cut(s) 137, 148, 220, 224, 251, 426
Csp6I GTAC 2 cut(s) 893, 1016
CspCI CAANNNNNGTGG 1 cut(s) 34
CviAII CATG 2 cut(s) 697, 763
CviQI GTAC 2 cut(s) 893, 1016
DdeI CTNAG 4 cut(s) 744, 752, 976, 1011
DpnI GATC 2 cut(s) 452, 681
DpnII GATC 2 cut(s) 450, 679
DriI GACNNNNNGTC 1 cut(s) 436
EaeI YGGCCR 4 cut(s) 30, 369, 816, 902
EagI CGGCCG 1 cut(s) 816
Eam1104I CTCTTC 2 cut(s) 530, 1020
Eam1105I GACNNNNNGTC 1 cut(s) 436
EarI CTCTTC 2 cut(s) 530, 1020
EciI GGCGGA 2 cut(s) 227, 304
EclXI CGGCCG 1 cut(s) 816
Eco130I CCWWGG 1 cut(s) 10
Eco31I GGTCTC 1 cut(s) 950
Eco47I GGWCC 3 cut(s) 289, 671, 780
Eco52I CGGCCG 1 cut(s) 816
Eco57I CTGAAG 1 cut(s) 715
EcoO109I RGGNCCY 3 cut(s) 187, 289, 671
EcoRII CCWGG 2 cut(s) 183, 592
EcoT14I CCWWGG 1 cut(s) 10
ErhI CCWWGG 1 cut(s) 10
FaeI CATG 2 cut(s) 700, 766
FaiI YATR 7 cut(s) 660, 665, 698, 764, 802, 888, 1081
FaqI GGGAC 4 cut(s) 275, 371, 657, 733
FatI CATG 2 cut(s) 696, 762
FauI CCCGC 4 cut(s) 8, 279, 442, 682
FblI GTMKAC 1 cut(s) 99
Fnu4HI GCNGC 7 cut(s) 78, 81, 195, 345, 348, 369, 548
FokI GGATG 3 cut(s) 178, 236, 1041
Fsp4HI GCNGC 7 cut(s) 78, 81, 195, 345, 348, 369, 548
GlaI GCGC 4 cut(s) 25, 149, 278, 938
GluI GCNGC 7 cut(s) 78, 81, 195, 345, 348, 369, 548
GsaI CCCAGC 1 cut(s) 277
GsuI CTGGAG 1 cut(s) 572
HaeII RGCGCY 1 cut(s) 280
HaeIII GGCC 9 cut(s) 6, 32, 83, 107, 188, 371, 592, 818, 904
HapII CCGG 7 cut(s) 293, 497, 778, 847, 879, 934, 1070
HgaI GACGC 6 cut(s) 137, 148, 220, 224, 251, 426
HhaI GCGC 4 cut(s) 26, 150, 279, 939
Hin1I GRCGYC 3 cut(s) 129, 216, 243
Hin1II CATG 2 cut(s) 700, 766
Hin6I GCGC 4 cut(s) 24, 148, 277, 937
HinP1I GCGC 4 cut(s) 24, 148, 277, 937
HincII GTYRAC 3 cut(s) 100, 339, 966
HindII GTYRAC 3 cut(s) 100, 339, 966
HinfI GANTC 7 cut(s) 59, 96, 320, 631, 742, 962, 974
HpaII CCGG 7 cut(s) 293, 497, 778, 847, 879, 934, 1070
HphI GGTGA 3 cut(s) 133, 193, 319
Hpy166II GTNNAC 3 cut(s) 100, 339, 966
Hpy188I TCNGA 7 cut(s) 517, 741, 769, 798, 843, 875, 1059
Hpy188III TCNNGA 4 cut(s) 163, 497, 778, 1046
Hpy8I GTNNAC 3 cut(s) 100, 339, 966
Hpy99I CGWCG 9 cut(s) 38, 131, 224, 236, 245, 398, 401, 442, 521
HpyAV CCTTC 2 cut(s) 651, 739
HpyCH4IV ACGT 3 cut(s) 399, 420, 868
HpyCH4V TGCA 4 cut(s) 66, 93, 207, 708
HpyF3I CTNAG 4 cut(s) 744, 752, 976, 1011
HpySE526I ACGT 3 cut(s) 399, 420, 868
Hsp92I GRCGYC 3 cut(s) 129, 216, 243
Hsp92II CATG 2 cut(s) 700, 766
HspAI GCGC 4 cut(s) 24, 148, 277, 937
KflI GGGWCCC 2 cut(s) 289, 671
Kpn2I TCCGGA 2 cut(s) 496, 777
Kzo9I GATC 2 cut(s) 450, 679
LmnI GCTCC 3 cut(s) 21, 483, 499
Lsp1109I GCAGC 3 cut(s) 331, 334, 534
MaeII ACGT 3 cut(s) 399, 420, 868
MaeIII GTNAC 3 cut(s) 199, 325, 829
MalI GATC 2 cut(s) 452, 681
MbiI CCGCTC 1 cut(s) 286
MboI GATC 2 cut(s) 450, 679
MboII GAAGA 6 cut(s) 517, 520, 661, 1037, 1043, 1061
MlsI TGGCCA 1 cut(s) 904
MluCI AATT 3 cut(s) 463, 559, 685
MluNI TGGCCA 1 cut(s) 904
MlyI GAGTC 6 cut(s) 53, 105, 329, 736, 968, 971
MmeI TCCRAC 3 cut(s) 540, 747, 764
Mox20I TGGCCA 1 cut(s) 904
MroI TCCGGA 2 cut(s) 496, 777
MscI TGGCCA 1 cut(s) 904
Msp20I TGGCCA 1 cut(s) 904
MspA1I CMGCKG 2 cut(s) 197, 344
MspI CCGG 7 cut(s) 293, 497, 778, 847, 879, 934, 1070
MspR9I CCNGG 7 cut(s) 185, 293, 594, 848, 880, 934, 1070
MvaI CCWGG 2 cut(s) 185, 594
MvnI CGCG 3 cut(s) 26, 148, 437
NciI CCSGG 5 cut(s) 293, 848, 880, 934, 1070
NdeII GATC 2 cut(s) 450, 679
NlaIII CATG 2 cut(s) 700, 766
NlaIV GGNNCC 6 cut(s) 189, 290, 291, 591, 672, 673
NmeAIII GCCGAG 2 cut(s) 343, 927
NmuCI GTSAC 2 cut(s) 199, 325
NspI RCATGY 1 cut(s) 766
NspV TTCGAA 1 cut(s) 927
PaqCI CACCTGC 1 cut(s) 212
PcsI WCGNNNNNNNCGW 3 cut(s) 228, 390, 426
PfeI GAWTC 1 cut(s) 631
PflFI GACNNNGTC 2 cut(s) 218, 745
PfoI TCCNGGA 1 cut(s) 1068
PkrI GCNGC 7 cut(s) 79, 82, 196, 346, 349, 370, 549
PleI GAGTC 6 cut(s) 53, 104, 328, 736, 968, 970
PpsI GAGTC 6 cut(s) 53, 104, 328, 736, 968, 970
PpuMI RGGWCCY 2 cut(s) 289, 671
Psp1406I AACGTT 1 cut(s) 868
Psp5II RGGWCCY 2 cut(s) 289, 671
Psp6I CCWGG 2 cut(s) 183, 592
PspFI CCCAGC 1 cut(s) 273
PspGI CCWGG 2 cut(s) 183, 592
PspN4I GGNNCC 6 cut(s) 189, 290, 291, 591, 672, 673
PspPI GGNCC 6 cut(s) 4, 187, 289, 590, 671, 780
PspPPI RGGWCCY 2 cut(s) 289, 671
PstI CTGCAG 1 cut(s) 95
PstNI CAGNNNCTG 1 cut(s) 347
PsyI GACNNNGTC 2 cut(s) 218, 745
PvuII CAGCTG 1 cut(s) 344
RsaI GTAC 2 cut(s) 894, 1017
RsaNI GTAC 2 cut(s) 893, 1016
SalI GTCGAC 1 cut(s) 98
SatI GCNGC 7 cut(s) 78, 81, 195, 345, 348, 369, 548
Sau3AI GATC 2 cut(s) 450, 679
Sau96I GGNCC 6 cut(s) 4, 187, 289, 590, 671, 780
SchI GAGTC 6 cut(s) 53, 105, 329, 736, 968, 971
ScrFI CCNGG 7 cut(s) 185, 293, 594, 848, 880, 934, 1070
SfcI CTRYAG 1 cut(s) 91
SfuI TTCGAA 1 cut(s) 927
SinI GGWCC 3 cut(s) 289, 671, 780
Sse9I AATT 3 cut(s) 463, 559, 685
StyD4I CCNGG 7 cut(s) 183, 291, 592, 846, 878, 932, 1068
StyI CCWWGG 1 cut(s) 10
TaiI ACGT 3 cut(s) 402, 423, 871
TaqI TCGA 6 cut(s) 99, 440, 473, 534, 693, 927
TasI AATT 3 cut(s) 463, 559, 685
TauI GCSGC 4 cut(s) 80, 83, 197, 371
TfiI GAWTC 1 cut(s) 631
TseFI GTSAC 2 cut(s) 199, 325
TseI GCWGC 3 cut(s) 344, 347, 547
Tsp45I GTSAC 2 cut(s) 199, 325
TspDTI ATGAA 1 cut(s) 668
TspGWI ACGGA 1 cut(s) 614
Tth111I GACNNNGTC 2 cut(s) 218, 745
VpaK11BI GGWCC 3 cut(s) 289, 671, 780
XapI RAATTY 1 cut(s) 463
XceI RCATGY 1 cut(s) 766
XmiI GTMKAC 1 cut(s) 99
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.