Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0010475

Physical Location & Seq

Genomic Coordinates Reverse (-)

24914079 .. 24916010

Gene Structure 1932 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1278 bp

ATGAAATATCCACTTTACCCTCATGTGTATCAACCGCGGACGGGGTGGCCCCTCTCTCTCTCTCACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACCGTCTCAGTCGCTAGGGTTTGGTAGCAGCTGGAATAAAAAATCGAAGGAAATGGTTTCATCTGATGATGACCGATTGGCCACTGAGGCTGTGGAGAAAGTGACAGATTCAGAGAAGAAGAAGAAGAAGAAGAAGCATAGGGACAAAGACAGCGATTTTGACAAAGACTTCATGATCAAGCCCCAGGGCTCAACTCCCTCCTTGGACACCTCTCAGTGGCCTATCCTTCTCAAAAACTATCACCGACTCAATGTTCGAACTGGACATTACACCCCTCTACCCTCGGGGTTCTCCCCACTTAAGCGGCCTCTTGCCGAGTACATCCGATATGGTGTTCTCAATCTTGACAAGCCTGCAAACCCCTCTTCACACGAGGTAGTTGCTTGGATTAAGCGCATCCTTCGCGTTGAGAAAACTGGCCACAGCGGTACTCTGGATCCTAAGGTTACAGGTAATCTCATTGTCTGCATTGACCGAGCCACACGACTTGTCAAGTCCCAGCAGGGTGCAGGGAAAGAGTATGTTTGTGTTGCCCGCTTGCATTCAGCTGTGCCTGATGTTGCCAAAGTGGCTCGGGCCCTTGAATCTCTTACTGGGGCTGTCTTTCAGAGGCCACCTTTGATATCAGCAGTCAAGAGGCAGCTTAGGATTAGGACCATCTATGAAAGCAAACTTCTTGAGTTTGATACGGATAAACATTTGGTTGTTTTCTGGATTTCTTGCGAAGCAGGAACCTATGTGCGGACACTCTGTGTGCATTTGGGTCTGCTGCTTGGTGTGGGAGGTCATATGCAGGAGCTTAGGAGGGTCAGGTCTGGGATTATGGGCGAGAAAGACAACATGGTCACAATGCATGATGTCATGGATGCTCAGTGGGCTTATGACACTAATAGGGATGAGAGTTATTTGAGGAGGGTCATCATGCCTCTTGAGGTTCTCTTGACCAGTTATAAGAGATTGGTTGTCAAGGACTCAGCAGTGAATGCCATTTGCTACGGTGCCAAGTTAATGATTCCAGGGCTGCTTAGGTTTGAGAATGATATCGAGGTTGGAGAGGAAGTTGTGCTGATGACTACCAAAGGAGAAGCCATTGCATTGGGAATTGCCGAGATGACCACTGCTGTGATGGCAACTTGTTCGATCATGGTGTGGTGGCAAAGATTAAGAGGGTGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000154 GO:0000495 GO:0001522 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005732 GO:0005737 GO:0005829 GO:0005911 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009506 GO:0009982 GO:0009987 GO:0010467 GO:0016070 GO:0016071 GO:0016072 GO:0016073 GO:0016074 GO:0016556 GO:0016853 GO:0016866 GO:0022613 GO:0030054 GO:0031118 GO:0031120 GO:0031123 GO:0031126 GO:0031429 GO:0031974 GO:0031981 GO:0032991 GO:0033979 GO:0034470 GO:0034641 GO:0034660 GO:0034964 GO:0040031 GO:0042254 GO:0043144 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043412 GO:0043628 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0055044 GO:0070013 GO:0071704 GO:0071840 GO:0072588 GO:0090304 GO:1901360 GO:1902494 GO:1990481 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

DKCLD PUA TruB_C_2 TruB_N

Protein Analysis

426

Amino Acids

47.93

Weight (kDa)

9.42

Isoelectric Point (pI)

33.49

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DKCLD	PF08068	104 - 161	5.2e-31	DKCLD (NUC011) domain
TruB_N	PF01509	165 - 281	4.8e-21	TruB family pseudouridylate synthase (N terminal domain)
TruB_C_2	PF16198	282 - 348	6.4e-27	tRNA pseudouridylate synthase B C-terminal domain
PUA	PF01472	352 - 413	7.5e-20	PUA domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0010475)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G57150
fragaria_vesca	FvH4_5g20900 FvH4_5g20900 FvH4_5g20900
malus_domestica	MD06G1043100.v1.1 MD16G1267700.v1.1 MD16G1267900.v1.1
prunus_persica	Prupe.1G572500_v2.0.a1 Prupe.5G050000_v2.0.a1
pyrus_communis	pycom06g03610 pycom16g23720
rosa_chinensis	RchiOBHm_Chr7g0207911
rosa_laevigata	RLG00000003276
rosa_multiflora	Rmu_sc0006577.1_g000004
rosa_roxburghii	Rroxscaffold_3G00251050
rosa_rugosa	Rorug07G0100200
rosa_samantha	Rh7AG233600 Rh7BG229200 Rh7CG248900 Rh7DG239600
rosa_wichuraiana	Rw0G001290

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1053
AasI	GACNNNNNNGTC	1 cut(s)	944
AccB1I	GGYRCC	1 cut(s)	1100
AccII	CGCG	2 cut(s)	37, 507
AciI	CCGC	6 cut(s)	35, 37, 406, 528, 637, 844
AclWI	GGATC	2 cut(s)	533, 546
AcoI	YGGCCR	2 cut(s)	180, 520
AdeI	CACNNNGTG	1 cut(s)	854
AfaI	GTAC	2 cut(s)	422, 532
AfiI	CCNNNNNNNGG	3 cut(s)	41, 318, 843
AflII	CTTAAG	1 cut(s)	401
AgsI	TTSAA	1 cut(s)	686
AjnI	CCWGG	2 cut(s)	285, 1117
AleI	CACNNNNGTG	1 cut(s)	1223
AluBI	AGCT	4 cut(s)	132, 650, 745, 901
AluI	AGCT	4 cut(s)	132, 650, 745, 901
Alw26I	GTCTC	1 cut(s)	111
AlwI	GGATC	2 cut(s)	533, 546
Ama87I	CYCGRG	2 cut(s)	385, 675
AoxI	GGCC	7 cut(s)	47, 180, 320, 407, 520, 678, 713
ApaI	GGGCCC	1 cut(s)	682
ApeKI	GCWGC	4 cut(s)	129, 742, 871, 1123
ArsI	GACNNNNNNTTYG	4 cut(s)	242, 274, 339, 371
AspLEI	GCGC	1 cut(s)	498
AspS9I	GGNCC	4 cut(s)	48, 678, 679, 756
AsuHPI	GGTGA	1 cut(s)	335
AsuII	TTCGAA	1 cut(s)	358
AvaI	CYCGRG	2 cut(s)	385, 675
AvaII	GGWCC	1 cut(s)	756
AxyI	CCTNAGG	1 cut(s)	543
BaeGI	GKGCMC	1 cut(s)	682
BalI	TGGCCA	2 cut(s)	182, 522
BamHI	GGATCC	1 cut(s)	538
BanI	GGYRCC	1 cut(s)	1100
BanII	GRGCYC	2 cut(s)	293, 682
BauI	CACGAG	1 cut(s)	473
BbvI	GCAGC	4 cut(s)	141, 754, 858, 1110
BccI	CCATC	2 cut(s)	767, 1222
BcgI	CGANNNNNNTGC	4 cut(s)	464, 498, 1221, 1255
BciT130I	CCWGG	2 cut(s)	287, 1119
BclI	TGATCA	1 cut(s)	276
BcoDI	GTCTC	1 cut(s)	111
BfaI	CTAG	1 cut(s)	116
BfrI	CTTAAG	1 cut(s)	401
BglI	GCCNNNNNGGC	2 cut(s)	188, 671
BisI	GCNGC	5 cut(s)	130, 407, 743, 872, 1124
BlsI	GCNGC	5 cut(s)	131, 408, 744, 873, 1125
Bme1390I	CCNGG	2 cut(s)	287, 1119
Bme18I	GGWCC	1 cut(s)	756
BmeT110I	CYCGRG	2 cut(s)	385, 675
BmgT120I	GGNCC	4 cut(s)	48, 678, 679, 756
BmiI	GGNNCC	5 cut(s)	50, 540, 680, 835, 1102
BmrFI	CCNGG	2 cut(s)	287, 1119
BmrI	ACTGGG	1 cut(s)	705
BmsI	GCATC	2 cut(s)	507, 958
BmuI	ACTGGG	1 cut(s)	705
Bpu10I	CCTNAGC	3 cut(s)	746, 902, 1127
Bpu14I	TTCGAA	1 cut(s)	358
BpuEI	CTTGAG	2 cut(s)	800, 1052
BsaJI	CCNNGG	6 cut(s)	35, 285, 286, 303, 384, 1118
BsaXI	ACNNNNNCTCC	2 cut(s)	1146, 1176
Bsc4I	CCNNNNNNNGG	3 cut(s)	41, 318, 843
Bse1I	ACTGG	4 cut(s)	367, 523, 700, 1047
Bse21I	CCTNAGG	1 cut(s)	543
Bse3DI	GCAATG	1 cut(s)	1191
BseBI	CCWGG	2 cut(s)	287, 1119
BseDI	CCNNGG	6 cut(s)	35, 285, 286, 303, 384, 1118
BseGI	GGATG	4 cut(s)	423, 498, 973, 1003
BseLI	CCNNNNNNNGG	3 cut(s)	41, 318, 843
BseMI	GCAATG	1 cut(s)	1191
BseMII	CTCAG	5 cut(s)	122, 177, 329, 986, 1089
BseNI	ACTGG	4 cut(s)	367, 523, 700, 1047
BseRI	GAGGAG	1 cut(s)	1027
BseSI	GKGCMC	1 cut(s)	682
BseXI	GCAGC	4 cut(s)	141, 754, 858, 1110
BseYI	CCCAGC	1 cut(s)	600
BsgI	GTGCAG	1 cut(s)	630
Bsh1236I	CGCG	2 cut(s)	37, 507
BshFI	GGCC	7 cut(s)	49, 182, 322, 409, 522, 680, 715
BshNI	GGYRCC	1 cut(s)	1100
BsiHKCI	CYCGRG	2 cut(s)	385, 675
BslFI	GGGAC	2 cut(s)	257, 583
BslI	CCNNNNNNNGG	3 cut(s)	41, 318, 843
BsmAI	GTCTC	1 cut(s)	111
BsmBI	CGTCTC	1 cut(s)	111
BsmFI	GGGAC	2 cut(s)	257, 583
BsmI	GAATGC	2 cut(s)	643, 1090
BsnI	GGCC	7 cut(s)	49, 182, 322, 409, 522, 680, 715
BsoBI	CYCGRG	2 cut(s)	385, 675
Bsp119I	TTCGAA	1 cut(s)	358
Bsp120I	GGGCCC	1 cut(s)	678
Bsp1286I	GDGCHC	2 cut(s)	293, 682
Bsp143I	GATC	3 cut(s)	276, 538, 1242
BspACI	CCGC	6 cut(s)	35, 37, 406, 528, 637, 844
BspANI	GGCC	7 cut(s)	49, 182, 322, 409, 522, 680, 715
BspCNI	CTCAG	5 cut(s)	121, 178, 328, 985, 1088
BspFNI	CGCG	2 cut(s)	37, 507
BspHI	TCATGA	1 cut(s)	273
BspLI	GGNNCC	5 cut(s)	50, 540, 680, 835, 1102
BspPI	GGATC	2 cut(s)	533, 546
BspT104I	TTCGAA	1 cut(s)	358
BspT107I	GGYRCC	1 cut(s)	1100
BspTI	CTTAAG	1 cut(s)	401
BsrDI	GCAATG	1 cut(s)	1191
BsrI	ACTGG	4 cut(s)	367, 523, 700, 1047
BssECI	CCNNGG	6 cut(s)	35, 285, 286, 303, 384, 1118
BssMI	GATC	3 cut(s)	276, 538, 1242
BssSI	CACGAG	1 cut(s)	473
BssT1I	CCWWGG	1 cut(s)	303
Bst2BI	CACGAG	1 cut(s)	473
Bst2UI	CCWGG	2 cut(s)	287, 1119
Bst4CI	ACNGT	2 cut(s)	105, 1100
Bst6I	CTCTTC	1 cut(s)	472
BstAFI	CTTAAG	1 cut(s)	401
BstAPI	GCANNNNNTGC	1 cut(s)	1085
BstBI	TTCGAA	1 cut(s)	358
BstC8I	GCNNGC	3 cut(s)	456, 637, 641
BstDEI	CTNAG	9 cut(s)	108, 186, 315, 543, 746, 902, 972, 1075, 1127
BstDSI	CCRYGG	1 cut(s)	35
BstF5I	GGATG	4 cut(s)	423, 498, 973, 1003
BstFNI	CGCG	2 cut(s)	37, 507
BstHHI	GCGC	1 cut(s)	498
BstKTI	GATC	3 cut(s)	279, 541, 1245
BstMAI	GTCTC	1 cut(s)	111
BstMBI	GATC	3 cut(s)	276, 538, 1242
BstMWI	GCNNNNNNNGC	6 cut(s)	188, 504, 671, 977, 1085, 1229
BstNI	CCWGG	2 cut(s)	287, 1119
BstSCI	CCNGG	2 cut(s)	285, 1117
BstSLI	GKGCMC	1 cut(s)	682
BstUI	CGCG	2 cut(s)	37, 507
BstV1I	GCAGC	4 cut(s)	141, 754, 858, 1110
BstX2I	RGATCY	1 cut(s)	538
BstXI	CCANNNNNNTGG	1 cut(s)	1198
BstYI	RGATCY	1 cut(s)	538
Bsu36I	CCTNAGG	1 cut(s)	543
BsuRI	GGCC	7 cut(s)	49, 182, 322, 409, 522, 680, 715
BtgI	CCRYGG	1 cut(s)	35
BtsCI	GGATG	4 cut(s)	423, 498, 973, 1003
BtsI	GCAGTG	2 cut(s)	1086, 1218
BtsIMutI	CAGTG	5 cut(s)	183, 323, 980, 1086, 1218
Cac8I	GCNNGC	3 cut(s)	456, 637, 641
CciI	TCATGA	1 cut(s)	273
CfoI	GCGC	1 cut(s)	498
Cfr13I	GGNCC	4 cut(s)	48, 678, 679, 756
Cfr42I	CCGCGG	1 cut(s)	38
Csp6I	GTAC	2 cut(s)	421, 531
CspCI	CAANNNNNGTGG	2 cut(s)	571, 606
CviAII	CATG	7 cut(s)	23, 274, 943, 956, 964, 1024, 1246
CviQI	GTAC	2 cut(s)	421, 531
DdeI	CTNAG	9 cut(s)	108, 186, 315, 543, 746, 902, 972, 1075, 1127
DpnI	GATC	3 cut(s)	278, 540, 1244
DpnII	GATC	3 cut(s)	276, 538, 1242
DraIII	CACNNNGTG	1 cut(s)	854
DrdI	GACNNNNNNGTC	1 cut(s)	944
DseDI	GACNNNNNNGTC	1 cut(s)	944
EaeI	YGGCCR	2 cut(s)	180, 520
Eam1104I	CTCTTC	1 cut(s)	472
EarI	CTCTTC	1 cut(s)	472
Eco130I	CCWWGG	1 cut(s)	303
Eco24I	GRGCYC	2 cut(s)	293, 682
Eco32I	GATATC	2 cut(s)	726, 1144
Eco47I	GGWCC	1 cut(s)	756
Eco81I	CCTNAGG	1 cut(s)	543
Eco88I	CYCGRG	2 cut(s)	385, 675
EcoO109I	RGGNCCY	1 cut(s)	679
EcoRII	CCWGG	2 cut(s)	285, 1117
EcoRV	GATATC	2 cut(s)	726, 1144
EcoT14I	CCWWGG	1 cut(s)	303
EcoT22I	ATGCAT	1 cut(s)	957
EcoT38I	GRGCYC	2 cut(s)	293, 682
ErhI	CCWWGG	1 cut(s)	303
Esp3I	CGTCTC	1 cut(s)	111
FaeI	CATG	7 cut(s)	26, 277, 946, 959, 967, 1027, 1249
FaqI	GGGAC	2 cut(s)	257, 583
FatI	CATG	7 cut(s)	22, 273, 942, 955, 963, 1023, 1245
FauI	CCCGC	1 cut(s)	644
FauNDI	CATATG	1 cut(s)	891
FbaI	TGATCA	1 cut(s)	276
Fnu4HI	GCNGC	5 cut(s)	130, 407, 743, 872, 1124
FokI	GGATG	4 cut(s)	410, 485, 980, 1010
FriOI	GRGCYC	2 cut(s)	293, 682
Fsp4HI	GCNGC	5 cut(s)	130, 407, 743, 872, 1124
FspBI	CTAG	1 cut(s)	116
GlaI	GCGC	1 cut(s)	497
GluI	GCNGC	5 cut(s)	130, 407, 743, 872, 1124
GsaI	CCCAGC	1 cut(s)	604
HaeIII	GGCC	7 cut(s)	49, 182, 322, 409, 522, 680, 715
HhaI	GCGC	1 cut(s)	498
Hin1II	CATG	7 cut(s)	26, 277, 946, 959, 967, 1027, 1249
Hin6I	GCGC	1 cut(s)	496
HinP1I	GCGC	1 cut(s)	496
HinfI	GANTC	5 cut(s)	209, 348, 686, 1073, 1114
HphI	GGTGA	1 cut(s)	335
Hpy188I	TCNGA	4 cut(s)	166, 214, 428, 711
Hpy188III	TCNNGA	8 cut(s)	274, 446, 536, 736, 779, 814, 1031, 1042
HpyAV	CCTTC	3 cut(s)	142, 338, 512
HpyCH4III	ACNGT	2 cut(s)	105, 1100
HpyCH4V	TGCA	8 cut(s)	458, 570, 611, 643, 859, 895, 955, 1196
HpyF10VI	GCNNNNNNNGC	6 cut(s)	188, 504, 671, 977, 1085, 1229
HpyF3I	CTNAG	9 cut(s)	108, 186, 315, 543, 746, 902, 972, 1075, 1127
Hsp92II	CATG	7 cut(s)	26, 277, 946, 959, 967, 1027, 1249
HspAI	GCGC	1 cut(s)	496
Ksp22I	TGATCA	1 cut(s)	276
KspI	CCGCGG	1 cut(s)	38
Kzo9I	GATC	3 cut(s)	276, 538, 1242
LmnI	GCTCC	1 cut(s)	898
Lsp1109I	GCAGC	4 cut(s)	141, 754, 858, 1110
LweI	GCATC	2 cut(s)	507, 958
MaeI	CTAG	1 cut(s)	116
MaeIII	GTNAC	3 cut(s)	202, 547, 946
MalI	GATC	3 cut(s)	278, 540, 1244
MboI	GATC	3 cut(s)	276, 538, 1242
MboII	GAAGA	7 cut(s)	229, 232, 235, 238, 241, 244, 459
MflI	RGATCY	1 cut(s)	538
MhlI	GDGCHC	2 cut(s)	293, 682
MlsI	TGGCCA	2 cut(s)	182, 522
MluCI	AATT	1 cut(s)	1203
MluNI	TGGCCA	2 cut(s)	182, 522
MlyI	GAGTC	2 cut(s)	342, 1067
MmeI	TCCRAC	1 cut(s)	1132
Mox20I	TGGCCA	2 cut(s)	182, 522
Mph1103I	ATGCAT	1 cut(s)	957
MscI	TGGCCA	2 cut(s)	182, 522
MseI	TTAA	4 cut(s)	402, 492, 1109, 1265
MslI	CAYNNNNRTG	1 cut(s)	1223
Msp20I	TGGCCA	2 cut(s)	182, 522
MspA1I	CMGCKG	4 cut(s)	37, 132, 528, 650
MspCI	CTTAAG	1 cut(s)	401
MspR9I	CCNGG	2 cut(s)	287, 1119
Mva1269I	GAATGC	2 cut(s)	643, 1090
MvaI	CCWGG	2 cut(s)	287, 1119
MvnI	CGCG	2 cut(s)	37, 507
MwoI	GCNNNNNNNGC	6 cut(s)	188, 504, 671, 977, 1085, 1229
NdeI	CATATG	1 cut(s)	891
NdeII	GATC	3 cut(s)	276, 538, 1242
NlaIII	CATG	7 cut(s)	26, 277, 946, 959, 967, 1027, 1249
NlaIV	GGNNCC	5 cut(s)	50, 540, 680, 835, 1102
NmeAIII	GCCGAG	2 cut(s)	442, 1234
NmuCI	GTSAC	2 cut(s)	202, 946
NsiI	ATGCAT	1 cut(s)	957
NspV	TTCGAA	1 cut(s)	358
OliI	CACNNNNGTG	1 cut(s)	1223
PagI	TCATGA	1 cut(s)	273
PasI	CCCWGGG	1 cut(s)	286
PctI	GAATGC	2 cut(s)	643, 1090
PfeI	GAWTC	3 cut(s)	209, 686, 1114
PkrI	GCNGC	5 cut(s)	131, 408, 744, 873, 1125
PleI	GAGTC	2 cut(s)	342, 1067
PpsI	GAGTC	2 cut(s)	342, 1067
PsiI	TTATAA	1 cut(s)	1053
Psp6I	CCWGG	2 cut(s)	285, 1117
PspFI	CCCAGC	1 cut(s)	600
PspGI	CCWGG	2 cut(s)	285, 1117
PspN4I	GGNNCC	5 cut(s)	50, 540, 680, 835, 1102
PspOMI	GGGCCC	1 cut(s)	678
PspPI	GGNCC	4 cut(s)	48, 678, 679, 756
PsuI	RGATCY	1 cut(s)	538
PvuII	CAGCTG	2 cut(s)	132, 650
RsaI	GTAC	2 cut(s)	422, 532
RsaNI	GTAC	2 cut(s)	421, 531
RseI	CAYNNNNRTG	1 cut(s)	1223
SacII	CCGCGG	1 cut(s)	38
SaqAI	TTAA	4 cut(s)	402, 492, 1109, 1265
SatI	GCNGC	5 cut(s)	130, 407, 743, 872, 1124
Sau3AI	GATC	3 cut(s)	276, 538, 1242
Sau96I	GGNCC	4 cut(s)	48, 678, 679, 756
SchI	GAGTC	2 cut(s)	342, 1067
ScrFI	CCNGG	2 cut(s)	287, 1119
SduI	GDGCHC	2 cut(s)	293, 682
SfaNI	GCATC	2 cut(s)	507, 958
Sfr303I	CCGCGG	1 cut(s)	38
SfuI	TTCGAA	1 cut(s)	358
SgrBI	CCGCGG	1 cut(s)	38
SinI	GGWCC	1 cut(s)	756
SmiMI	CAYNNNNRTG	1 cut(s)	1223
SmlI	CTYRAG	3 cut(s)	401, 779, 1031
SmoI	CTYRAG	3 cut(s)	401, 779, 1031
Sse9I	AATT	1 cut(s)	1203
SsiI	CCGC	6 cut(s)	35, 37, 406, 528, 637, 844
SspMI	CTAG	1 cut(s)	116
StyD4I	CCNGG	2 cut(s)	285, 1117
StyI	CCWWGG	1 cut(s)	303
TaaI	ACNGT	2 cut(s)	105, 1100
TaqI	TCGA	4 cut(s)	146, 358, 1146, 1241
TaqII	GACCGA	2 cut(s)	189, 591
TasI	AATT	1 cut(s)	1203
TatI	WGTACW	1 cut(s)	420
TauI	GCSGC	1 cut(s)	409
TfiI	GAWTC	3 cut(s)	209, 686, 1114
Tru1I	TTAA	4 cut(s)	402, 492, 1109, 1265
Tru9I	TTAA	4 cut(s)	402, 492, 1109, 1265
TscAI	CASTG	5 cut(s)	190, 323, 980, 1086, 1225
TseFI	GTSAC	2 cut(s)	202, 946
TseI	GCWGC	4 cut(s)	129, 742, 871, 1123
Tsp45I	GTSAC	2 cut(s)	202, 946
TspDTI	ATGAA	4 cut(s)	17, 150, 262, 780
TspGWI	ACGGA	1 cut(s)	806
TspRI	CASTG	5 cut(s)	190, 323, 980, 1086, 1225
Vha464I	CTTAAG	1 cut(s)	401
VpaK11BI	GGWCC	1 cut(s)	756
XcmI	CCANNNNNNNNNTGG	2 cut(s)	190, 1225
XspI	CTAG	1 cut(s)	116
Zsp2I	ATGCAT	1 cut(s)	957

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.