pycom16g25780

Belongs to the cytochrome P450 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr16
Physical Location & Seq
Reverse (-)
27928108 .. 27930487
2380 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1425 bp
ATGGAGTTGAATCTCCTAAACTACATGTTTTGCATCTTTGCCTTTCTTGTCTTATTCCTCTTTGTCATCAATTCCCTCATCACCAAGCTCTTCACTCCGGTTCGCCGGAAATTCCCACTTCCACCGGGTTCCTTGGGCTGGCCTTACATTGGAGAAACCTTCCAACTCTACTCTCAAAACCCAAATGTCTTCTTTGCCTCTAAACAAAAGAGGTTTGGGTCAATCTTCAAAACCCACATCTTGGGTTGTCCATGTGTGATGATTTCGAGCCCGGAAGCGGCCAAATTCGTGCTTTCTCGAGCCCATCTGTTCAAGCCAACTTTTCCGGCAAGCAAAGAGAGGATGTTGGGGAAAGAAGCCATCTTTTTCCACCAAGGAGATTACCATGCCCAATTGAGAAAGCTTGTCCTTCGTGCCTTCATGCCGGAAGCCGTCAGAAGTATCATCCCTGACATTGAATCCATTGCCAAAGACTCTCTCAAGTCTTGCCAAGGCCGCTTGATCAACTCCTTCCAAGAAATGAAAACGTTCACATTCAATGTTGCACTCCTTTCTATATTTGGAAAGGATGAGATTCTGTACAGAGAGGATCTGAAGAGGTGTTACTACATTCTTGAGAAGGGATACAATTCAATGCCCATTAATCTTCCAGGCACACTGTTTCACAAGTCAATGAAAGCAAGGAAGGAGCTTGCTCAGATCTTGGCCAAAATTATATCTAAAAGGAGGCAAAGGATGCAGGTGGAGGAGGAGGACCATAAGGATCTTCTCGGATCATTCATGGGTGGCAAAGAAGGCCTCACGGACCAACAAATCGCCGACAACGTTATTGGTGTCATCTTTGCTGCCCGTGACACCACGGCCAGCGTCCTGACTTGGATTGTCAAGTACCTTGGGGAAAACCCAAGTGTGCTTCAAGCTGTCACTGATGAGCAAGAAGCAATAATAAGGTCAAAAGAAGAGGAAGAGGATAAAGTTCTGAGTTGGGCAGATACCAAAAAGATGCCCATGACTTGTAGGGTTATTCAGGAGACTCTTAGAGTTGCTTCCATTTTATCTTTTACTTTCAGGGAAGCTGTGGAGGATGTTGAATATGAAGGTTATCTGATACCAAAGGGGTGGAAAGTTTTACCACTTTTCAGAAATATTCACCACAGCCCAGAAATCTTTCCTGACCCTGACAAGTTTGATCCTTCCAGATTTGAGGTTGCTCCAAAACCCAATACATACATGCCATTTGGCAGCGGGAACCACTCATGTCCAGGGAATGAATTGGCCAAGCTGGAGATTTTGGTCTTTTTGCACCATCTAACAACAAAGTACAGATGGTCTATTGTTGGTGCACAAAATGGCATACAGTATGGCCCTTTTGCTCTTCCCCAAAATGGCCTGCCCATCATATTATCTCCTAAAACTATCATATAA

Protein Analysis

475

Amino Acids

54.12

Weight (kDa)

9.0

Isoelectric Point (pI)

48.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
p450 PF00067 41 - 446 1.4e-75 Cytochrome P450
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 730
Acc36I ACCTGC 1 cut(s) 730
AccB7I CCANNNNNTGG 1 cut(s) 241
AciI CCGC 3 cut(s) 278, 496, 1245
AclI AACGTT 2 cut(s) 527, 825
AclWI GGATC 4 cut(s) 597, 771, 781, 1184
AcoI YGGCCR 4 cut(s) 279, 705, 861, 1275
AcsI RAATTY 2 cut(s) 110, 284
AcuI CTGAAG 1 cut(s) 614
AfaI GTAC 3 cut(s) 581, 890, 1322
AfiI CCNNNNNNNGG 5 cut(s) 138, 149, 241, 277, 1385
AflIII ACRYGT 1 cut(s) 24
AgsI TTSAA 8 cut(s) 10, 229, 313, 458, 538, 633, 917, 1091
AjnI CCWGG 2 cut(s) 649, 1261
AluBI AGCT 6 cut(s) 88, 403, 691, 920, 1076, 1282
AluI AGCT 6 cut(s) 88, 403, 691, 920, 1076, 1282
Alw21I GWGCWC 1 cut(s) 1345
Alw26I GTCTC 1 cut(s) 1025
Alw44I GTGCAC 1 cut(s) 1341
AlwI GGATC 4 cut(s) 597, 771, 781, 1184
Ama87I CYCGRG 1 cut(s) 297
AoxI GGCC 9 cut(s) 140, 279, 493, 705, 796, 861, 1275, 1363, 1387
ApaLI GTGCAC 1 cut(s) 1341
ApeKI GCWGC 2 cut(s) 845, 1242
ApoI RAATTY 2 cut(s) 110, 284
AseI ATTAAT 1 cut(s) 642
Asp700I GAANNNNTTC 2 cut(s) 527, 1167
AspS9I GGNCC 3 cut(s) 754, 805, 1364
AsuC2I CCSGG 2 cut(s) 126, 272
AsuHPI GGTGA 2 cut(s) 73, 1142
AvaI CYCGRG 1 cut(s) 297
AvaII GGWCC 2 cut(s) 754, 805
BaeGI GKGCMC 1 cut(s) 1345
BalI TGGCCA 2 cut(s) 707, 1277
BanII GRGCYC 2 cut(s) 272, 304
BarI GAAGNNNNNNTAC 2 cut(s) 587, 619
BbsI GAAGAC 1 cut(s) 181
Bbv12I GWGCWC 1 cut(s) 1345
BbvI GCAGC 2 cut(s) 832, 1254
BccI CCATC 5 cut(s) 312, 368, 1314, 1320, 1403
BceAI ACGGC 2 cut(s) 416, 876
BciT130I CCWGG 2 cut(s) 651, 1263
BciVI GTATCC 1 cut(s) 617
BclI TGATCA 1 cut(s) 501
BcnI CCSGG 2 cut(s) 126, 272
BcoDI GTCTC 1 cut(s) 1025
BfuAI ACCTGC 1 cut(s) 730
BfuI GTATCC 1 cut(s) 617
BglII AGATCT 1 cut(s) 699
BisI GCNGC 4 cut(s) 279, 496, 846, 1243
BlsI GCNGC 4 cut(s) 280, 497, 847, 1244
Bme1390I CCNGG 4 cut(s) 126, 272, 651, 1263
Bme18I GGWCC 2 cut(s) 754, 805
BmeT110I CYCGRG 1 cut(s) 297
BmgT120I GGNCC 3 cut(s) 754, 805, 1364
BmiI GGNNCC 2 cut(s) 130, 1250
BmrFI CCNGG 4 cut(s) 126, 272, 651, 1263
BmsI GCATC 3 cut(s) 42, 726, 993
BpiI GAAGAC 1 cut(s) 181
BpmI CTGGAG 1 cut(s) 1304
BpuEI CTTGAG 2 cut(s) 464, 635
BpuMI CCSGG 2 cut(s) 126, 272
BsaJI CCNNGG 6 cut(s) 132, 373, 490, 858, 892, 1262
BsaWI WCCGGW 1 cut(s) 97
Bsc4I CCNNNNNNNGG 5 cut(s) 138, 149, 241, 277, 1385
Bse3DI GCAATG 1 cut(s) 462
BseBI CCWGG 2 cut(s) 651, 1263
BseDI CCNNGG 6 cut(s) 132, 373, 490, 858, 892, 1262
BseGI GGATG 5 cut(s) 348, 444, 574, 741, 1090
BseLI CCNNNNNNNGG 5 cut(s) 138, 149, 241, 277, 1385
BseMI GCAATG 1 cut(s) 462
BseMII CTCAG 2 cut(s) 710, 971
BseRI GAGGAG 2 cut(s) 761, 764
BseSI GKGCMC 1 cut(s) 1345
BseXI GCAGC 2 cut(s) 832, 1254
BshFI GGCC 9 cut(s) 142, 281, 495, 707, 798, 863, 1277, 1365, 1389
BsiHKAI GWGCWC 1 cut(s) 1345
BsiHKCI CYCGRG 1 cut(s) 297
BsiSI CCGG 6 cut(s) 98, 106, 125, 272, 326, 425
BslI CCNNNNNNNGG 5 cut(s) 138, 149, 241, 277, 1385
BsmAI GTCTC 1 cut(s) 1025
BsnI GGCC 9 cut(s) 142, 281, 495, 707, 798, 863, 1277, 1365, 1389
BsoBI CYCGRG 1 cut(s) 297
Bsp1286I GDGCHC 3 cut(s) 272, 304, 1345
Bsp1407I TGTACA 1 cut(s) 579
Bsp143I GATC 6 cut(s) 501, 589, 699, 763, 773, 1189
BspACI CCGC 3 cut(s) 278, 496, 1245
BspANI GGCC 9 cut(s) 142, 281, 495, 707, 798, 863, 1277, 1365, 1389
BspCNI CTCAG 2 cut(s) 709, 972
BspLI GGNNCC 2 cut(s) 130, 1250
BspMI ACCTGC 1 cut(s) 730
BspPI GGATC 4 cut(s) 597, 771, 781, 1184
BspQI GCTCTTC 2 cut(s) 95, 1380
BsrDI GCAATG 1 cut(s) 462
BsrGI TGTACA 1 cut(s) 579
BssECI CCNNGG 6 cut(s) 132, 373, 490, 858, 892, 1262
BssMI GATC 6 cut(s) 501, 589, 699, 763, 773, 1189
BssT1I CCWWGG 4 cut(s) 132, 373, 490, 892
Bst2UI CCWGG 2 cut(s) 651, 1263
Bst4CI ACNGT 2 cut(s) 660, 1359
Bst6I CTCTTC 5 cut(s) 95, 590, 954, 960, 1380
BstAPI GCANNNNNTGC 1 cut(s) 736
BstAUI TGTACA 1 cut(s) 579
BstC8I GCNNGC 5 cut(s) 140, 331, 693, 865, 1391
BstDEI CTNAG 3 cut(s) 696, 980, 1037
BstDSI CCRYGG 1 cut(s) 858
BstF5I GGATG 5 cut(s) 348, 444, 574, 741, 1090
BstKTI GATC 6 cut(s) 504, 592, 702, 766, 776, 1192
BstMAI GTCTC 1 cut(s) 1025
BstMBI GATC 6 cut(s) 501, 589, 699, 763, 773, 1189
BstMWI GCNNNNNNNGC 3 cut(s) 495, 736, 795
BstNI CCWGG 2 cut(s) 651, 1263
BstNSI RCATGY 2 cut(s) 28, 1234
BstSCI CCNGG 4 cut(s) 124, 270, 649, 1261
BstSLI GKGCMC 1 cut(s) 1345
BstV1I GCAGC 2 cut(s) 832, 1254
BstV2I GAAGAC 1 cut(s) 181
BstX2I RGATCY 3 cut(s) 589, 699, 763
BstXI CCANNNNNNTGG 1 cut(s) 1119
BstYI RGATCY 3 cut(s) 589, 699, 763
BsuI GTATCC 1 cut(s) 617
BsuRI GGCC 9 cut(s) 142, 281, 495, 707, 798, 863, 1277, 1365, 1389
BtgI CCRYGG 1 cut(s) 858
BtsCI GGATG 5 cut(s) 348, 444, 574, 741, 1090
BtsIMutI CAGTG 2 cut(s) 656, 924
BveI ACCTGC 1 cut(s) 730
Cac8I GCNNGC 5 cut(s) 140, 331, 693, 865, 1391
Cfr13I GGNCC 3 cut(s) 754, 805, 1364
CseI GACGC 1 cut(s) 856
Csp6I GTAC 3 cut(s) 580, 889, 1321
CviAII CATG 8 cut(s) 25, 252, 386, 421, 781, 1009, 1231, 1257
CviQI GTAC 3 cut(s) 580, 889, 1321
DdeI CTNAG 3 cut(s) 696, 980, 1037
DpnI GATC 6 cut(s) 503, 591, 701, 765, 775, 1191
DpnII GATC 6 cut(s) 501, 589, 699, 763, 773, 1189
EaeI YGGCCR 4 cut(s) 279, 705, 861, 1275
Eam1104I CTCTTC 5 cut(s) 95, 590, 954, 960, 1380
EarI CTCTTC 5 cut(s) 95, 590, 954, 960, 1380
Eco130I CCWWGG 4 cut(s) 132, 373, 490, 892
Eco147I AGGCCT 1 cut(s) 798
Eco24I GRGCYC 2 cut(s) 272, 304
Eco47I GGWCC 2 cut(s) 754, 805
Eco57I CTGAAG 1 cut(s) 614
Eco88I CYCGRG 1 cut(s) 297
EcoRII CCWGG 2 cut(s) 649, 1261
EcoT14I CCWWGG 4 cut(s) 132, 373, 490, 892
EcoT38I GRGCYC 2 cut(s) 272, 304
ErhI CCWWGG 4 cut(s) 132, 373, 490, 892
FaeI CATG 8 cut(s) 28, 255, 389, 424, 784, 1012, 1234, 1260
FatI CATG 8 cut(s) 24, 251, 385, 420, 780, 1008, 1230, 1256
FauI CCCGC 1 cut(s) 1238
FbaI TGATCA 1 cut(s) 501
Fnu4HI GCNGC 4 cut(s) 279, 496, 846, 1243
FokI GGATG 5 cut(s) 355, 431, 581, 748, 1097
FriOI GRGCYC 2 cut(s) 272, 304
Fsp4HI GCNGC 4 cut(s) 279, 496, 846, 1243
GluI GCNGC 4 cut(s) 279, 496, 846, 1243
GsuI CTGGAG 1 cut(s) 1304
HaeIII GGCC 9 cut(s) 142, 281, 495, 707, 798, 863, 1277, 1365, 1389
HapII CCGG 6 cut(s) 98, 106, 125, 272, 326, 425
HgaI GACGC 1 cut(s) 856
Hin1II CATG 8 cut(s) 28, 255, 389, 424, 784, 1012, 1234, 1260
HindIII AAGCTT 1 cut(s) 401
HinfI GANTC 5 cut(s) 10, 458, 473, 574, 1033
HpaII CCGG 6 cut(s) 98, 106, 125, 272, 326, 425
HphI GGTGA 2 cut(s) 73, 1142
Hpy166II GTNNAC 2 cut(s) 531, 1343
Hpy188I TCNGA 7 cut(s) 437, 594, 699, 773, 981, 1107, 1142
Hpy188III TCNNGA 6 cut(s) 297, 614, 871, 1028, 1172, 1197
Hpy8I GTNNAC 2 cut(s) 531, 1343
HpyAV CCTTC 9 cut(s) 169, 419, 427, 520, 613, 679, 788, 1091, 1203
HpyCH4III ACNGT 2 cut(s) 660, 1359
HpyCH4IV ACGT 2 cut(s) 527, 825
HpyCH4V TGCA 5 cut(s) 33, 545, 739, 1303, 1343
HpyF10VI GCNNNNNNNGC 3 cut(s) 495, 736, 795
HpyF3I CTNAG 3 cut(s) 696, 980, 1037
HpySE526I ACGT 2 cut(s) 527, 825
Hsp92II CATG 8 cut(s) 28, 255, 389, 424, 784, 1012, 1234, 1260
Ksp22I TGATCA 1 cut(s) 501
Kzo9I GATC 6 cut(s) 501, 589, 699, 763, 773, 1189
LguI GCTCTTC 2 cut(s) 95, 1380
LmnI GCTCC 2 cut(s) 688, 1216
Lsp1109I GCAGC 2 cut(s) 832, 1254
LweI GCATC 3 cut(s) 42, 726, 993
MaeII ACGT 2 cut(s) 527, 825
MaeIII GTNAC 3 cut(s) 602, 851, 922
MalI GATC 6 cut(s) 503, 591, 701, 765, 775, 1191
MboI GATC 6 cut(s) 501, 589, 699, 763, 773, 1189
MboII GAAGA 9 cut(s) 82, 181, 217, 607, 638, 758, 971, 977, 1367
MfeI CAATTG 1 cut(s) 392
MflI RGATCY 3 cut(s) 589, 699, 763
MhlI GDGCHC 3 cut(s) 272, 304, 1345
MlsI TGGCCA 2 cut(s) 707, 1277
MluCI AATT 7 cut(s) 70, 110, 284, 392, 628, 711, 1271
MluNI TGGCCA 2 cut(s) 707, 1277
MlyI GAGTC 2 cut(s) 467, 1027
MmeI TCCRAC 1 cut(s) 187
Mox20I TGGCCA 2 cut(s) 707, 1277
MroXI GAANNNNTTC 2 cut(s) 527, 1167
MscI TGGCCA 2 cut(s) 707, 1277
MseI TTAA 1 cut(s) 642
Msp20I TGGCCA 2 cut(s) 707, 1277
MspA1I CMGCKG 1 cut(s) 1245
MspI CCGG 6 cut(s) 98, 106, 125, 272, 326, 425
MspR9I CCNGG 4 cut(s) 126, 272, 651, 1263
MunI CAATTG 1 cut(s) 392
MvaI CCWGG 2 cut(s) 651, 1263
MwoI GCNNNNNNNGC 3 cut(s) 495, 736, 795
NciI CCSGG 2 cut(s) 126, 272
NdeII GATC 6 cut(s) 501, 589, 699, 763, 773, 1189
NlaIII CATG 8 cut(s) 28, 255, 389, 424, 784, 1012, 1234, 1260
NlaIV GGNNCC 2 cut(s) 130, 1250
NmuCI GTSAC 2 cut(s) 851, 922
NspI RCATGY 2 cut(s) 28, 1234
PaeR7I CTCGAG 1 cut(s) 297
PaqCI CACCTGC 1 cut(s) 730
PceI AGGCCT 1 cut(s) 798
PciI ACATGT 1 cut(s) 24
PciSI GCTCTTC 2 cut(s) 95, 1380
PcsI WCGNNNNNNNCGW 1 cut(s) 822
PdmI GAANNNNTTC 2 cut(s) 527, 1167
PfeI GAWTC 3 cut(s) 10, 458, 574
PflMI CCANNNNNTGG 1 cut(s) 241
PkrI GCNGC 4 cut(s) 280, 497, 847, 1244
PleI GAGTC 2 cut(s) 467, 1027
PpsI GAGTC 2 cut(s) 467, 1027
PscI ACATGT 1 cut(s) 24
PshBI ATTAAT 1 cut(s) 642
Psp1406I AACGTT 2 cut(s) 527, 825
Psp6I CCWGG 2 cut(s) 649, 1261
PspGI CCWGG 2 cut(s) 649, 1261
PspN4I GGNNCC 2 cut(s) 130, 1250
PspPI GGNCC 3 cut(s) 754, 805, 1364
PsuI RGATCY 3 cut(s) 589, 699, 763
RsaI GTAC 3 cut(s) 581, 890, 1322
RsaNI GTAC 3 cut(s) 580, 889, 1321
SapI GCTCTTC 2 cut(s) 95, 1380
SaqAI TTAA 1 cut(s) 642
SatI GCNGC 4 cut(s) 279, 496, 846, 1243
Sau3AI GATC 6 cut(s) 501, 589, 699, 763, 773, 1189
Sau96I GGNCC 3 cut(s) 754, 805, 1364
SchI GAGTC 2 cut(s) 467, 1027
ScrFI CCNGG 4 cut(s) 126, 272, 651, 1263
SduI GDGCHC 3 cut(s) 272, 304, 1345
SfaNI GCATC 3 cut(s) 42, 726, 993
Sfr274I CTCGAG 1 cut(s) 297
SinI GGWCC 2 cut(s) 754, 805
SlaI CTCGAG 1 cut(s) 297
SmlI CTYRAG 3 cut(s) 297, 479, 614
SmoI CTYRAG 3 cut(s) 297, 479, 614
Sse9I AATT 7 cut(s) 70, 110, 284, 392, 628, 711, 1271
SseBI AGGCCT 1 cut(s) 798
SsiI CCGC 3 cut(s) 278, 496, 1245
SspI AATATT 1 cut(s) 1147
StuI AGGCCT 1 cut(s) 798
StyD4I CCNGG 4 cut(s) 124, 270, 649, 1261
StyI CCWWGG 4 cut(s) 132, 373, 490, 892
TaaI ACNGT 2 cut(s) 660, 1359
TaiI ACGT 2 cut(s) 530, 828
TaqI TCGA 2 cut(s) 266, 298
TasI AATT 7 cut(s) 70, 110, 284, 392, 628, 711, 1271
TatI WGTACW 2 cut(s) 579, 1320
TauI GCSGC 2 cut(s) 281, 498
TfiI GAWTC 3 cut(s) 10, 458, 574
Tru1I TTAA 1 cut(s) 642
Tru9I TTAA 1 cut(s) 642
TscAI CASTG 2 cut(s) 663, 931
TseFI GTSAC 2 cut(s) 851, 922
TseI GCWGC 2 cut(s) 845, 1242
Tsp45I GTSAC 2 cut(s) 851, 922
TspDTI ATGAA 6 cut(s) 409, 536, 689, 769, 1110, 1284
TspGWI ACGGA 1 cut(s) 818
TspRI CASTG 2 cut(s) 663, 931
Van91I CCANNNNNTGG 1 cut(s) 241
VneI GTGCAC 1 cut(s) 1341
VpaK11BI GGWCC 2 cut(s) 754, 805
VspI ATTAAT 1 cut(s) 642
XapI RAATTY 2 cut(s) 110, 284
XceI RCATGY 2 cut(s) 28, 1234
XhoI CTCGAG 1 cut(s) 297
XmnI GAANNNNTTC 2 cut(s) 527, 1167
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.