Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0009778

Physical Location & Seq

Genomic Coordinates Reverse (-)

3041511 .. 3045356

Gene Structure 3846 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2112 bp

ATGGTCGGAAGGACAACTGTTATTGTGGCACATCGCCTTTCCACTATTAGAAATGTTGATAGCATTGCAGTTATACAACAAGGCCAAGTTGTCGAGACAGGTACACATGAAGAACTGATTGCTAAAGCAGGGGCATACGCTTCTCTAATTCGATTCCAAGAGATGGTTGGGAACAGAGACTTCAGGAACCCATCTACTCGCTGCTCGCGTTCATCACGTCTAAGCCACTCATTGTCAACGAAGTCTTTAAGCCTCCGGTCTGGCAGCTTAAGGAACCTGAGCTATTCGTACAGTACAGGTGCTGATGGGCGGATAGAGATGATTTCAAATGCTGAAACAGACAGGAAAACTCGAGCTCCTAAGAACTATTTCTTCCGGCTTCTGAAGCTAAACGCTCCTGAATGGCCCTATTCAATAATGGCCGCTATAGGATCAGTACTCTCTGGGTTTATCGGTCCAACATTTGCTATTCTAATGGGCAACATGATTGAGGTTTTCTACTATAGAAACCCTGCCTCAATGGAAAGGAAGACAAAGGAATATGTTTTCATGTACGTTGGAGTGGGACTATACGCCGTGGTTGCATATTTGATACAGCATTACTTCTTCAGCATCATGGGAGAGAACCTCACTACTAGAGTGAGAAGGATGATGCTTGCAGCAATCTTGAGGAATGAAGTTGGATGGTTTGATGAGGAGGAGCACAACTCTAACCTTCTAACAGCTAAATTGGCGACGGATGCTGCTGATGTGAAATCAGCTGTTTCTGAGAGGATATCTGTGATATTGCAGAACATGACTTCACTCCTCACTTCATTCATTGTTGCCTTCATAGTGGAATGGAGAGTATCCCTGCTCATTTTAGCAACCTTCCCTCTTCTGGTGCTAGCCAACTTTGCTCAGCAACTTTCTTTGAAGGGCTTTGCTGGAGACACAGCCAAGGCTCATGCAAAGACGAGCATGATTGCTGGGGAGGGAGTGAGCAACATTCGGACAGTCGCCGCCTTCAATGCCCAAAACAAGATCCTATCTCTGTTCTGCCATGAGCTCCGTCTCCCACTGCTGGGAAGCCTCCGCCGCAGCCAAACTGCTGGCGTCCTATTTGGCATTTCTCAGTTTGCTCTCCATGCCTCTGAAGCTCTCATTTTGTGGTACGGTGCCCACCTCGTTAGCAAAGGTGTCTCCACCTTCTCGAAAGTTATTAAGGTTTTCATTGTCCTTGTTGTAACGGCGAATTCAGTTGCTGAAACTGTCAGCCTTGCCCCGGAGATTATCAGGGGCGGTGAAGCAGTTGGTTCGGTATTTTCAATCCTTGATCGTCAAACAAGGATTGACCCGGATGACCCTGAGGCTGAGGTGGTCGAATCAGTTCGCGGAGAAATTGAACTTAGGCATGTTGATTTTGCATATCCATCGCGACCTGATATCATGGTGTTCAAAGATTTTAGTCTCAGAATCCGAACTGGCCACAGCCAAGCGCTTGTCGGAGCTAGTGGTTCGGGAAAGAGTTCCGTGATTGCATTGATCGAGCGATTTTATGATCCACTAGTTGGTAAAGTAATGATCGATGGCAAGGACATCCGCCGGTTGAACTTGAAGTCTCTTCGGTTGAAAATTGGACTGGTGCAACAAGAACCAGCCCTGTTTGCAGCAAGCATCTTTGAAAACATTGCCTACGGCAAAGAAGGCGCATCCGAAGCAGAAGTAATCGAAGCTGCACGTACTGCTAACGTGCATGGTTTCGTTAGCGGATTGCCTGATGGATACAAAACCCCGGTTGGGGAGCGAGGAGTTCAGCTCTCCGGTGGACAAAAACAAAGAATTGCGATCGCAAGGGCGGTGCTCAAGGACCCTAGAATACTCTTGTTAGATGAGGCCACAAGTGCACTTGATGCTGAATCAGAATGTGTGCTGCAAGAAGCACTCGAGAGGCTAATGAGGGGCCGCACCACCGTGCTTGTTGCCCACCGTTTGTCGACAATTAGAGGGGTGGACAGCATTGGCGTGGTGCAAGACGGGCGCATTGTGGAACACGGCAGCCATTCGGAACTAGTGAGCCGCCCCGACGGAGCTTACTCAAGGCTGTTGCAGCTGCAAAATCATCACGTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0005215 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0007275 GO:0008150 GO:0008361 GO:0009314 GO:0009411 GO:0009416 GO:0009605 GO:0009606 GO:0009628 GO:0009629 GO:0009630 GO:0009637 GO:0009639 GO:0009640 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009791 GO:0009908 GO:0009914 GO:0009926 GO:0009958 GO:0009966 GO:0009987 GO:0010033 GO:0010218 GO:0010315 GO:0010329 GO:0010540 GO:0010541 GO:0010646 GO:0010817 GO:0010928 GO:0015562 GO:0016020 GO:0016043 GO:0022414 GO:0022622 GO:0022857 GO:0023051 GO:0032501 GO:0032502 GO:0032535 GO:0042221 GO:0043473 GO:0043476 GO:0043478 GO:0043479 GO:0043480 GO:0043481 GO:0044464 GO:0048364 GO:0048367 GO:0048437 GO:0048438 GO:0048443 GO:0048466 GO:0048527 GO:0048528 GO:0048583 GO:0048608 GO:0048646 GO:0048731 GO:0048827 GO:0048856 GO:0048859 GO:0050789 GO:0050794 GO:0050896 GO:0051179 GO:0051234 GO:0055085 GO:0060918 GO:0061458 GO:0065007 GO:0065008 GO:0071840 GO:0071944 GO:0080161 GO:0090066 GO:0090567 GO:0090691 GO:0090696 GO:0099402

KEGG Pathways

Metabolic & Signaling

ko02010 ko04976 ko05206 ko05226 map02010 map04976 map05206 map05226

Pfam Domains

Protein Families

ABC_membrane ABC_tran

Protein Analysis

704

Amino Acids

77.16

Weight (kDa)

9.27

Isoelectric Point (pI)

35.0

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ABC_membrane	PF00664	139 - 410	1.9e-48	ABC transporter transmembrane region
ABC_tran	PF00005	480 - 628	1.8e-30	ABC transporter

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009778)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28860
fragaria_vesca	FvH4_6g48960 FvH4_6g48960 FvH4_6g48960 FvH4_6g48960 FvH4_6g48960
malus_domestica	MD09G1049400.v1.1 MD17G1049500.v1.1 MD17G1049600.v1.1
prunus_persica	Prupe.3G269400_v2.0.a1 Prupe.3G269400_v2.0.a1
pyrus_communis	pycom111g04040 pycom17g04450
rosa_chinensis	RchiOBHm_Chr2g0168761
rosa_laevigata	RLG00000021808
rosa_multiflora	Rmu_ssc0000393.1_g000001
rosa_roxburghii	Rroxscaffold_2G00082690
rosa_rugosa	Rorug02G0535300
rosa_samantha	Rh2BG619000 Rh2DG629700
rosa_wichuraiana	Rw2G050250

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1157
AccB7I	CCANNNNNTGG	2 cut(s)	163, 1550
AccI	GTMKAC	1 cut(s)	1976
AccII	CGCG	3 cut(s)	208, 1374, 1417
AclWI	GGATC	3 cut(s)	439, 1018, 1535
AcoI	YGGCCR	2 cut(s)	420, 1465
AcsI	RAATTY	1 cut(s)	1234
AcuI	CTGAAG	4 cut(s)	166, 404, 592, 1155
AcyI	GRCGYC	1 cut(s)	1095
AfaI	GTAC	7 cut(s)	103, 290, 295, 438, 554, 1154, 1723
AfeI	AGCGCT	1 cut(s)	1479
AfiI	CCNNNNNNNGG	8 cut(s)	163, 880, 1063, 1064, 1264, 1550, 1779, 1780
AflII	CTTAAG	1 cut(s)	268
AhlI	ACTAGT	2 cut(s)	1546, 2050
AjiI	CACGTC	1 cut(s)	218
AleI	CACNNNNGTG	1 cut(s)	1952
Alw21I	GWGCWC	5 cut(s)	358, 705, 1050, 1845, 1888
Alw26I	GTCTC	7 cut(s)	89, 171, 924, 1058, 1186, 1454, 1605
Alw44I	GTGCAC	1 cut(s)	1884
AlwI	GGATC	3 cut(s)	439, 1018, 1535
AlwNI	CAGNNNCTG	2 cut(s)	302, 1244
Ama87I	CYCGRG	2 cut(s)	351, 1925
Aor51HI	AGCGCT	1 cut(s)	1479
AoxI	GGCC	6 cut(s)	82, 404, 420, 1465, 1875, 1942
ApaLI	GTGCAC	1 cut(s)	1884
ApoI	RAATTY	1 cut(s)	1234
AsiSI	GCGATCGC	1 cut(s)	1830
Asp700I	GAANNNNTTC	3 cut(s)	368, 1368, 1507
AspLEI	GCGC	3 cut(s)	1480, 1691, 2022
AspS9I	GGNCC	4 cut(s)	405, 455, 1849, 1942
AsuC2I	CCSGG	3 cut(s)	1265, 1337, 1775
AsuHPI	GGTGA	1 cut(s)	1295
AsuNHI	GCTAGC	1 cut(s)	886
AvaI	CYCGRG	2 cut(s)	351, 1925
AvaII	GGWCC	2 cut(s)	455, 1849
AxyI	CCTNAGG	1 cut(s)	1347
BaeGI	GKGCMC	2 cut(s)	1162, 1888
BalI	TGGCCA	1 cut(s)	1467
BanI	GGYRCC	1 cut(s)	1157
BanII	GRGCYC	2 cut(s)	358, 1050
BbsI	GAAGAC	1 cut(s)	536
Bbv12I	GWGCWC	5 cut(s)	358, 705, 1050, 1845, 1888
BbvCI	CCTCAGC	1 cut(s)	1353
BccI	CCATC	7 cut(s)	157, 199, 299, 678, 1420, 1562, 1754
BceAI	ACGGC	4 cut(s)	560, 1245, 1693, 2050
BcgI	CGANNNNNNTGC	4 cut(s)	1278, 1312, 1395, 1429
BciVI	GTATCC	2 cut(s)	859, 1757
BcnI	CCSGG	3 cut(s)	1265, 1337, 1775
BcoDI	GTCTC	7 cut(s)	89, 171, 924, 1058, 1186, 1454, 1605
BcuI	ACTAGT	2 cut(s)	1546, 2050
BfaI	CTAG	6 cut(s)	636, 887, 1491, 1547, 1854, 2051
BfmI	CTRYAG	2 cut(s)	426, 502
BfoI	RGCGCY	1 cut(s)	1481
BfrI	CTTAAG	1 cut(s)	268
BfuI	GTATCC	2 cut(s)	859, 1757
BlpI	GCTNAGC	1 cut(s)	900
BmcAI	AGTACT	1 cut(s)	438
Bme1390I	CCNGG	3 cut(s)	1265, 1337, 1775
Bme18I	GGWCC	2 cut(s)	455, 1849
BmeT110I	CYCGRG	2 cut(s)	351, 1925
BmgBI	CACGTC	1 cut(s)	218
BmgT120I	GGNCC	4 cut(s)	405, 455, 1849, 1942
BmiI	GGNNCC	5 cut(s)	188, 275, 1159, 1851, 1943
BmrFI	CCNGG	3 cut(s)	1265, 1337, 1775
BmsI	GCATC	6 cut(s)	621, 642, 730, 1665, 1700, 1882
BmtI	GCTAGC	1 cut(s)	890
BpiI	GAAGAC	1 cut(s)	536
BplI	GAGNNNNNCTC	6 cut(s)	612, 644, 692, 724, 1782, 1814
BpmI	CTGGAG	1 cut(s)	948
Bpu10I	CCTNAGC	2 cut(s)	278, 1353
Bpu1102I	GCTNAGC	1 cut(s)	900
BpuEI	CTTGAG	3 cut(s)	688, 1829, 2062
BpuMI	CCSGG	3 cut(s)	1265, 1337, 1775
Bsa29I	ATCGAT	1 cut(s)	1566
BsaAI	YACGTR	2 cut(s)	1721, 2107
BsaHI	GRCGYC	1 cut(s)	1095
BsaJI	CCNNGG	4 cut(s)	576, 939, 1263, 1773
BsaWI	WCCGGW	2 cut(s)	255, 1802
BsaXI	ACNNNNNCTCC	2 cut(s)	340, 370
Bsc4I	CCNNNNNNNGG	8 cut(s)	163, 880, 1063, 1064, 1264, 1550, 1779, 1780
Bse118I	RCCGGY	1 cut(s)	1584
Bse1I	ACTGG	2 cut(s)	1468, 1626
Bse21I	CCTNAGG	1 cut(s)	1347
Bse3DI	GCAATG	2 cut(s)	63, 1668
BseCI	ATCGAT	1 cut(s)	1566
BseDI	CCNNGG	4 cut(s)	576, 939, 1263, 1773
BseGI	GGATG	6 cut(s)	654, 689, 745, 1345, 1578, 1691
BseLI	CCNNNNNNNGG	8 cut(s)	163, 880, 1063, 1064, 1264, 1550, 1779, 1780
BseMI	GCAATG	2 cut(s)	63, 1668
BseMII	CTCAG	7 cut(s)	269, 759, 914, 1127, 1338, 1344, 1465
BseNI	ACTGG	2 cut(s)	1468, 1626
BseRI	GAGGAG	4 cut(s)	710, 713, 797, 1803
BseSI	GKGCMC	2 cut(s)	1162, 1888
BseYI	CCCAGC	2 cut(s)	968, 1063
BsgI	GTGCAG	1 cut(s)	1701
Bsh1236I	CGCG	3 cut(s)	208, 1374, 1417
Bsh1285I	CGRYCG	1 cut(s)	1830
BshFI	GGCC	6 cut(s)	84, 406, 422, 1467, 1877, 1944
BshNI	GGYRCC	1 cut(s)	1157
BshVI	ATCGAT	1 cut(s)	1566
BsiEI	CGRYCG	1 cut(s)	1830
BsiHKAI	GWGCWC	5 cut(s)	358, 705, 1050, 1845, 1888
BsiHKCI	CYCGRG	2 cut(s)	351, 1925
BsiSI	CCGG	7 cut(s)	256, 376, 1265, 1337, 1585, 1775, 1803
BslFI	GGGAC	1 cut(s)	579
BslI	CCNNNNNNNGG	8 cut(s)	163, 880, 1063, 1064, 1264, 1550, 1779, 1780
BsmAI	GTCTC	7 cut(s)	89, 171, 924, 1058, 1186, 1454, 1605
BsmBI	CGTCTC	1 cut(s)	1058
BsmFI	GGGAC	1 cut(s)	579
BsnI	GGCC	6 cut(s)	84, 406, 422, 1467, 1877, 1944
BsoBI	CYCGRG	2 cut(s)	351, 1925
Bsp1286I	GDGCHC	6 cut(s)	358, 705, 1050, 1162, 1845, 1888
Bsp143I	GATC	7 cut(s)	431, 1023, 1315, 1524, 1540, 1563, 1827
Bsp1720I	GCTNAGC	1 cut(s)	900
Bsp68I	TCGCGA	1 cut(s)	1417
BspANI	GGCC	6 cut(s)	84, 406, 422, 1467, 1877, 1944
BspCNI	CTCAG	7 cut(s)	270, 760, 913, 1126, 1339, 1345, 1464
BspDI	ATCGAT	1 cut(s)	1566
BspFNI	CGCG	3 cut(s)	208, 1374, 1417
BspLI	GGNNCC	5 cut(s)	188, 275, 1159, 1851, 1943
BspOI	GCTAGC	1 cut(s)	890
BspPI	GGATC	3 cut(s)	439, 1018, 1535
BspT107I	GGYRCC	1 cut(s)	1157
BspTI	CTTAAG	1 cut(s)	268
BsrDI	GCAATG	2 cut(s)	63, 1668
BsrFI	RCCGGY	1 cut(s)	1584
BsrI	ACTGG	2 cut(s)	1468, 1626
BssAI	RCCGGY	1 cut(s)	1584
BssECI	CCNNGG	4 cut(s)	576, 939, 1263, 1773
BssMI	GATC	7 cut(s)	431, 1023, 1315, 1524, 1540, 1563, 1827
BssNI	GRCGYC	1 cut(s)	1095
BssT1I	CCWWGG	1 cut(s)	939
Bst4CI	ACNGT	7 cut(s)	19, 293, 997, 1157, 1252, 1954, 1970
Bst6I	CTCTTC	2 cut(s)	882, 1608
BstACI	GRCGYC	1 cut(s)	1095
BstAFI	CTTAAG	1 cut(s)	268
BstAPI	GCANNNNNTGC	2 cut(s)	1724, 1892
BstBAI	YACGTR	2 cut(s)	1721, 2107
BstC8I	GCNNGC	5 cut(s)	206, 657, 888, 1093, 1654
BstDSI	CCRYGG	1 cut(s)	576
BstF5I	GGATG	6 cut(s)	654, 689, 745, 1345, 1578, 1691
BstFNI	CGCG	3 cut(s)	208, 1374, 1417
BstH2I	RGCGCY	1 cut(s)	1481
BstHHI	GCGC	3 cut(s)	1480, 1691, 2022
BstKTI	GATC	7 cut(s)	434, 1026, 1318, 1527, 1543, 1566, 1830
BstMAI	GTCTC	7 cut(s)	89, 171, 924, 1058, 1186, 1454, 1605
BstMBI	GATC	7 cut(s)	431, 1023, 1315, 1524, 1540, 1563, 1827
BstMCI	CGRYCG	1 cut(s)	1830
BstNSI	RCATGY	1 cut(s)	1397
BstSCI	CCNGG	3 cut(s)	1263, 1335, 1773
BstSFI	CTRYAG	2 cut(s)	426, 502
BstSLI	GKGCMC	2 cut(s)	1162, 1888
BstUI	CGCG	3 cut(s)	208, 1374, 1417
BstV2I	GAAGAC	1 cut(s)	536
BstX2I	RGATCY	1 cut(s)	1023
BstXI	CCANNNNNNTGG	1 cut(s)	1091
BstYI	RGATCY	1 cut(s)	1023
Bsu15I	ATCGAT	1 cut(s)	1566
Bsu36I	CCTNAGG	1 cut(s)	1347
BsuI	GTATCC	2 cut(s)	859, 1757
BsuRI	GGCC	6 cut(s)	84, 406, 422, 1467, 1877, 1944
BsuTUI	ATCGAT	1 cut(s)	1566
BtgI	CCRYGG	1 cut(s)	576
BtgZI	GCGATG	2 cut(s)	17, 1398
BtrI	CACGTC	1 cut(s)	218
BtsCI	GGATG	6 cut(s)	654, 689, 745, 1345, 1578, 1691
BtsI	GCAGTG	1 cut(s)	1058
BtsIMutI	CAGTG	1 cut(s)	1058
BtuMI	TCGCGA	1 cut(s)	1417
Cac8I	GCNNGC	5 cut(s)	206, 657, 888, 1093, 1654
CaiI	CAGNNNCTG	2 cut(s)	302, 1244
CfoI	GCGC	3 cut(s)	1480, 1691, 2022
Cfr10I	RCCGGY	1 cut(s)	1584
Cfr13I	GGNCC	4 cut(s)	405, 455, 1849, 1942
ClaI	ATCGAT	1 cut(s)	1566
CseI	GACGC	1 cut(s)	1084
Csp6I	GTAC	7 cut(s)	102, 289, 294, 437, 553, 1153, 1722
CspCI	CAANNNNNGTGG	2 cut(s)	1939, 1974
CviQI	GTAC	7 cut(s)	102, 289, 294, 437, 553, 1153, 1722
DpnI	GATC	7 cut(s)	433, 1025, 1317, 1526, 1542, 1565, 1829
DpnII	GATC	7 cut(s)	431, 1023, 1315, 1524, 1540, 1563, 1827
EaeI	YGGCCR	2 cut(s)	420, 1465
Eam1104I	CTCTTC	2 cut(s)	882, 1608
EarI	CTCTTC	2 cut(s)	882, 1608
EciI	GGCGGA	3 cut(s)	325, 1064, 1571
Ecl136II	GAGCTC	2 cut(s)	356, 1048
Eco130I	CCWWGG	1 cut(s)	939
Eco24I	GRGCYC	2 cut(s)	358, 1050
Eco32I	GATATC	2 cut(s)	777, 1426
Eco47I	GGWCC	2 cut(s)	455, 1849
Eco47III	AGCGCT	1 cut(s)	1479
Eco53kI	GAGCTC	2 cut(s)	356, 1048
Eco57I	CTGAAG	4 cut(s)	166, 404, 592, 1155
Eco81I	CCTNAGG	1 cut(s)	1347
Eco88I	CYCGRG	2 cut(s)	351, 1925
EcoICRI	GAGCTC	2 cut(s)	356, 1048
EcoO109I	RGGNCCY	1 cut(s)	1849
EcoRI	GAATTC	1 cut(s)	1234
EcoRV	GATATC	2 cut(s)	777, 1426
EcoT14I	CCWWGG	1 cut(s)	939
EcoT38I	GRGCYC	2 cut(s)	358, 1050
ErhI	CCWWGG	1 cut(s)	939
Esp3I	CGTCTC	1 cut(s)	1058
FaqI	GGGAC	1 cut(s)	579
FblI	GTMKAC	1 cut(s)	1976
FokI	GGATG	6 cut(s)	661, 696, 752, 1352, 1565, 1678
FriOI	GRGCYC	2 cut(s)	358, 1050
FspBI	CTAG	6 cut(s)	636, 887, 1491, 1547, 1854, 2051
GlaI	GCGC	3 cut(s)	1479, 1690, 2021
GsaI	CCCAGC	2 cut(s)	972, 1067
GsuI	CTGGAG	1 cut(s)	948
HaeII	RGCGCY	1 cut(s)	1481
HaeIII	GGCC	6 cut(s)	84, 406, 422, 1467, 1877, 1944
HapII	CCGG	7 cut(s)	256, 376, 1265, 1337, 1585, 1775, 1803
HgaI	GACGC	1 cut(s)	1084
HhaI	GCGC	3 cut(s)	1480, 1691, 2022
Hin1I	GRCGYC	1 cut(s)	1095
Hin6I	GCGC	3 cut(s)	1478, 1689, 2020
HinP1I	GCGC	3 cut(s)	1478, 1689, 2020
HincII	GTYRAC	2 cut(s)	237, 1977
HindII	GTYRAC	2 cut(s)	237, 1977
HinfI	GANTC	4 cut(s)	153, 1364, 1455, 1898
HpaII	CCGG	7 cut(s)	256, 376, 1265, 1337, 1585, 1775, 1803
HphI	GGTGA	1 cut(s)	1295
Hpy166II	GTNNAC	6 cut(s)	104, 237, 1808, 1886, 1977, 1993
Hpy188III	TCNNGA	8 cut(s)	94, 184, 398, 667, 1192, 1416, 1500, 1927
Hpy8I	GTNNAC	6 cut(s)	104, 237, 1808, 1886, 1977, 1993
Hpy99I	CGWCG	2 cut(s)	739, 2069
HpyAV	CCTTC	9 cut(s)	3, 639, 725, 838, 880, 910, 1015, 1198, 1679
HpyCH4III	ACNGT	7 cut(s)	19, 293, 997, 1157, 1252, 1954, 1970
HpyCH4IV	ACGT	5 cut(s)	217, 555, 1720, 1731, 2106
HpySE526I	ACGT	5 cut(s)	217, 555, 1720, 1731, 2106
Hsp92I	GRCGYC	1 cut(s)	1095
HspAI	GCGC	3 cut(s)	1478, 1689, 2020
Kzo9I	GATC	7 cut(s)	431, 1023, 1315, 1524, 1540, 1563, 1827
LmnI	GCTCC	7 cut(s)	361, 400, 700, 1053, 1487, 1783, 2069
LweI	GCATC	6 cut(s)	621, 642, 730, 1665, 1700, 1882
MaeI	CTAG	6 cut(s)	636, 887, 1491, 1547, 1854, 2051
MaeII	ACGT	5 cut(s)	217, 555, 1720, 1731, 2106
MaeIII	GTNAC	1 cut(s)	1225
MalI	GATC	7 cut(s)	433, 1025, 1317, 1526, 1542, 1565, 1829
MboI	GATC	7 cut(s)	431, 1023, 1315, 1524, 1540, 1563, 1827
MboII	GAAGA	6 cut(s)	122, 364, 541, 598, 869, 1595
MflI	RGATCY	1 cut(s)	1023
MhlI	GDGCHC	6 cut(s)	358, 705, 1050, 1162, 1845, 1888
MlsI	TGGCCA	1 cut(s)	1467
MluCI	AATT	7 cut(s)	147, 728, 1234, 1380, 1614, 1821, 1980
MluNI	TGGCCA	1 cut(s)	1467
MmeI	TCCRAC	4 cut(s)	482, 538, 661, 1465
Mox20I	TGGCCA	1 cut(s)	1467
MroXI	GAANNNNTTC	3 cut(s)	368, 1368, 1507
MscI	TGGCCA	1 cut(s)	1467
MseI	TTAA	3 cut(s)	248, 269, 1203
MslI	CAYNNNNRTG	2 cut(s)	1952, 2003
Msp20I	TGGCCA	1 cut(s)	1467
MspA1I	CMGCKG	2 cut(s)	761, 2092
MspCI	CTTAAG	1 cut(s)	268
MspI	CCGG	7 cut(s)	256, 376, 1265, 1337, 1585, 1775, 1803
MspR9I	CCNGG	3 cut(s)	1265, 1337, 1775
MvnI	CGCG	3 cut(s)	208, 1374, 1417
NciI	CCSGG	3 cut(s)	1265, 1337, 1775
NdeII	GATC	7 cut(s)	431, 1023, 1315, 1524, 1540, 1563, 1827
NheI	GCTAGC	1 cut(s)	886
NlaIV	GGNNCC	5 cut(s)	188, 275, 1159, 1851, 1943
NruI	TCGCGA	1 cut(s)	1417
NspI	RCATGY	1 cut(s)	1397
OliI	CACNNNNGTG	1 cut(s)	1952
PaeR7I	CTCGAG	2 cut(s)	351, 1925
PcsI	WCGNNNNNNNCGW	1 cut(s)	205
PdmI	GAANNNNTTC	3 cut(s)	368, 1368, 1507
PfeI	GAWTC	4 cut(s)	153, 1364, 1455, 1898
PflMI	CCANNNNNTGG	2 cut(s)	163, 1550
Ple19I	CGATCG	1 cut(s)	1830
Ppu21I	YACGTR	2 cut(s)	1721, 2107
PpuMI	RGGWCCY	1 cut(s)	1849
Psp124BI	GAGCTC	2 cut(s)	358, 1050
Psp5II	RGGWCCY	1 cut(s)	1849
PspFI	CCCAGC	2 cut(s)	968, 1063
PspN4I	GGNNCC	5 cut(s)	188, 275, 1159, 1851, 1943
PspPI	GGNCC	4 cut(s)	405, 455, 1849, 1942
PspPPI	RGGWCCY	1 cut(s)	1849
PspXI	VCTCGAGB	1 cut(s)	351
PstNI	CAGNNNCTG	2 cut(s)	302, 1244
PsuI	RGATCY	1 cut(s)	1023
PvuI	CGATCG	1 cut(s)	1830
PvuII	CAGCTG	2 cut(s)	761, 2092
RgaI	GCGATCGC	1 cut(s)	1830
RruI	TCGCGA	1 cut(s)	1417
RsaI	GTAC	7 cut(s)	103, 290, 295, 438, 554, 1154, 1723
RsaNI	GTAC	7 cut(s)	102, 289, 294, 437, 553, 1153, 1722
RseI	CAYNNNNRTG	2 cut(s)	1952, 2003
SacI	GAGCTC	2 cut(s)	358, 1050
SalI	GTCGAC	1 cut(s)	1975
SaqAI	TTAA	3 cut(s)	248, 269, 1203
Sau3AI	GATC	7 cut(s)	431, 1023, 1315, 1524, 1540, 1563, 1827
Sau96I	GGNCC	4 cut(s)	405, 455, 1849, 1942
ScaI	AGTACT	1 cut(s)	438
ScrFI	CCNGG	3 cut(s)	1265, 1337, 1775
SduI	GDGCHC	6 cut(s)	358, 705, 1050, 1162, 1845, 1888
SfaAI	GCGATCGC	1 cut(s)	1830
SfaNI	GCATC	6 cut(s)	621, 642, 730, 1665, 1700, 1882
SfcI	CTRYAG	2 cut(s)	426, 502
Sfr274I	CTCGAG	2 cut(s)	351, 1925
SgfI	GCGATCGC	1 cut(s)	1830
SinI	GGWCC	2 cut(s)	455, 1849
SlaI	CTCGAG	2 cut(s)	351, 1925
SmiMI	CAYNNNNRTG	2 cut(s)	1952, 2003
SmlI	CTYRAG	6 cut(s)	268, 351, 667, 1844, 1925, 2077
SmoI	CTYRAG	6 cut(s)	268, 351, 667, 1844, 1925, 2077
SpeI	ACTAGT	2 cut(s)	1546, 2050
Sse9I	AATT	7 cut(s)	147, 728, 1234, 1380, 1614, 1821, 1980
SspMI	CTAG	6 cut(s)	636, 887, 1491, 1547, 1854, 2051
SstI	GAGCTC	2 cut(s)	358, 1050
StyD4I	CCNGG	3 cut(s)	1263, 1335, 1773
StyI	CCWWGG	1 cut(s)	939
TaaI	ACNGT	7 cut(s)	19, 293, 997, 1157, 1252, 1954, 1970
TaiI	ACGT	5 cut(s)	220, 558, 1723, 1734, 2109
TaqII	GACCGA	1 cut(s)	443
TasI	AATT	7 cut(s)	147, 728, 1234, 1380, 1614, 1821, 1980
TatI	WGTACW	2 cut(s)	293, 436
TauI	GCSGC	5 cut(s)	425, 1004, 1080, 1947, 2061
TfiI	GAWTC	4 cut(s)	153, 1364, 1455, 1898
Tru1I	TTAA	3 cut(s)	248, 269, 1203
Tru9I	TTAA	3 cut(s)	248, 269, 1203
TscAI	CASTG	1 cut(s)	1065
TspDTI	ATGAA	8 cut(s)	123, 201, 538, 690, 804, 808, 820, 1201
TspGWI	ACGGA	4 cut(s)	752, 1040, 1501, 2082
TspRI	CASTG	1 cut(s)	1065
Van91I	CCANNNNNTGG	2 cut(s)	163, 1550
Vha464I	CTTAAG	1 cut(s)	268
VneI	GTGCAC	1 cut(s)	1884
VpaK11BI	GGWCC	2 cut(s)	455, 1849
XapI	RAATTY	1 cut(s)	1234
XceI	RCATGY	1 cut(s)	1397
XcmI	CCANNNNNNNNNTGG	1 cut(s)	164
XhoI	CTCGAG	2 cut(s)	351, 1925
XmiI	GTMKAC	1 cut(s)	1976
XmnI	GAANNNNTTC	3 cut(s)	368, 1368, 1507
XspI	CTAG	6 cut(s)	636, 887, 1491, 1547, 1854, 2051
ZrmI	AGTACT	1 cut(s)	438

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.