Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr17

Orthogroup ID

OG0003246

Physical Location & Seq

Genomic Coordinates Forward (+)

12839802 .. 12848140

Gene Structure 8339 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 4833 bp

ATGAATGTTCAGACACACACTTCAGGACCGATATCGGGGCAAGTGCCCAATCAGGCAGGATCTCAGATGCCTGTGCTCTCCCAGCATAATGGAAATGCCCTTGCTCCCCAAATGCAAAATTTAGGTGGGCCTGCTCGTGTTATGTCTAACATGGATCCTGATCTTCTCCGTGCACGCCAAATTGTGCAGGATAGAATATGCCAAATTATAGGGCAGCGACAACTTCCCCAGGCAATGAATGACAGGAAGTTTAGGGAGATTGTTAAAAAATTGGATGAGGGTTTATTGAAAAGCGCTCAGGACAAGGACGACTATATGAACCCGGAAACGTTAGAGAGTCGTTTGCACAATTTGATTAAGCGACCCCCAAATCAAAGCCAACAGTTTCAACAGGCTGTTAATTCTTCCTCTCCTGCTGGTATGATGATACCAACTCCTGGTATGTCACACAGTGGGAATTCAAATATGATGGTTACTTCTTCTATGGATGCTTCTATGAACACGACTAGAGGAAGTACTGGCATAGCGCCTATGACAGTCAACACAGGAAACTTGGTGCCCACTGGTGCCTTACATGGCGGCTCGTTCAATAGATCTGATGGTTCTATATCTAATGGTTATCAGCAGTCTCCTGCCAGTTTGTCCGTTGGTGCTGGAGGGAACACATCATCAATGGGTGTGCAAAGAATGGTTAGCCAAATGATTCCTACCCCTGGGTTTAATAGCAGTAATAATCAGTCTTACATGAATTTGGATTCTTCTAATAGTGGAGGTGGGTTCTGTACTGTTGATTCTTTAATGGTAACTCAACCACAACAGCAACAGCAGCATATTGGTGGTCAAAATAGCCGTATACTTCATAGCCTTGGCAGCCAAATAAATACTGGAATAAGGTCTGGCATGCAGCAGAAGTCTTATGGGTTGCCAAATGGGGCTCTAAATGGCGGGTTGGGCTTTGGGAACAGTTTACCAGTGGTTAATGAGTCTGGCACTTCTGAGGGCTATCTGACCTCAACACCCTATGCTAACTCTTCCAAACCATTACAACAGCACTTTGACCAACATCAGCGGCCAGTAATGCAAGGTGATAGCTATGGAATGAGCAGTGCTGATTCTTTTGGGCCTGGAAACTACTATGGTGCTGCGACCTCTGTTGGGTCAATGTTGAATCCTCAGAATTTGAATTCAGTCAGTTCGACACCCGTGTCCAAGGCCATCTCTCCCCTTGTAAATAGTCAGTCAAATATGCATGGTGCACAGCAAAGTGTTCATGCGAAGCCTCAACAACCTGATCAATTGGAAAAGATGAATTTCCAAACTCCTCTATCTTCAAGAGAGAATATTTTCCATTCTCATCAACAACAACAATTTCAACAGCAACCTAATCAGTATCAACAGCAACCTAACCAGTATCAACAACAACAGCATTTAGGTCACCAACAACGTCAACAGAAGCAGCAAAATCAGCAGCCCCAGCATTTGTTAAACAACGATGCTTTTGGTCATTCTCGGATCACACCTGATGTAAGTAGTCAAGCAAATCGTGGTGTGGACCACCATAGTGAAGTTATGCACCAACAAGGTACAGAACAGTTCCAATTATCAGAGATGCATAACCAATTCCATCAGCACCCTGTTGATGATCGGTTGAGGAATGCGCAGCATATCCCATCCCGGCAACATGGTATCTCCTCTTCGTTGTCTCAAGCTTCTCAGCCAATGCAACAGATATTGCATCCTCACCAACTGGTTGCAGAGTCTCAAAATGATTTCAGCCCTCTTTCTGCTGGAGCTCAAGATCAATGGCATCCTCAATCACAAGATGGGAGTCACAGACAGGTCAACATGTCCCATGAGCAGCATCTCCAGGAAGATTTCCGTCAGAGGATATCTGGGAAAGATGAAGCCCATTGTAATAATTTGTCTTCAGAAGGACCAATTGCTGTTCAAACAATTTCATCTAGAAGCACATCTCGTCCCCCCAATTCATCTAGTGCTGTTTTTCGATCTTCTAATGGCAATCAGGAGAAACAGTTCAAAAATCAACAGAGATGGCTTTTGTTCTTGCGCCATGCTCGGCGTTGTTCAGCCCATGAAGGCAAATGTCGCGAACGTAATTGTGTAACTGTTCAACAATTGTTAAAGCACATGGTAACATGCAATTTACCTCAATGCCCACATCCTCGTTGTCATGTTACCAAGAAATTGGTTCATCATAACAAGACTTGCAAGGACCCAGCTTGCCCTGTTTGCCCGCCTGTCAGGAATTATCTGCTGAGACATCCGAATAAGGCACACAATCATCTAGTTTCTGATTCTGGTTTGCAGAATTCAATAAATGGATCATGTAAAGCCTATGATAGTGAAGACGCTTCAGCTAGATTGGTTTTGAAGACAAATCCGGCTGTTGAAACTTCTGAAGATATGCAACTTTCTATAAAACGCATGAAAATAGAGCAGTCCTCTCAACCTGTTCTTTCTGATAGTGTTAGTTCTGCAGTAAAAGTTTCTGCGATTATTGAACCCCATGTGCCCCAGGATATACAGATTCAGGATTACCAACATGGTGAGATTTCTATGCCAGTCAAGTCTGAGGTTGCAAAAGTGAAAATGGAGGTTCCTTCAAGTTCTGGACAAGGGATTGTTGATGAGATGAAGGATATTGTTGAGGATAACTGCAATCAAGGGCATGAAGGTGAACCTGTCTCATATAATGAGCCCGCTGGTTTAGCTAAGCAAGAAAACATCAAACTTGAGAATGAAACTTATCCAGCTAAACAAGAAAATGCTACGCATAGTGTGGAAAATGCAGCTGGAACAAAGTCTGGGAAGCCTAAAATAAAGGGGGTATCAATGACTGAACTGTTCACTCCAGAGCAGGTTAGGGCCCACATTACAGGTCTCAGGCAGTGGGTTGGCCAGAGCAAGGCAAAGGCAGAGAAGAATCAAGCAATGGAGCATTCAATGAGTGAGAACTCCTGTCAGTTGTGTGCAGTTGAGAAGCTTACATTTGAGCCACCGCCGATATATTGCACACCTTGCGGTGTTCGTATCAAGCGCAACGCAATGTACTATACAATGGGGGCTGGTGACACACGACATTATTTCTGTATTCCATGCTATAATGAGGCTCGTGGAGACATGATAGTTGTTGATGGGACTAACATTCCAAAGGCAAGGCTAGAGAAGAAGAAAAATGACGAAGAGACTGAAGAGTGGTGGGTCCAATGTGACAAATGCGAAGCTTGGCAACATCAAATTTGTGCTTTGTTTAATGGCCGAAGGAATGATGGTGGGCAAGCCGAATACACTTGCCCTAATTGTTATATACAAGAGGTTGAAAGGGGAGAGCGTAAGCCTTTACCACAGAATGCTGTTCTGGGGGCCAAAGATTTGCCAAGGACAATACTGAGTGACCACATAGAGCAACGGTTATTTAAGAAACTGAAGGTTGAAAGACAAGAGAGGGCGAGGCAGCAGGGAAAGAATTATGATGAGGTTCCTGGGGCAGAATCGCTTGTAATCAGGGTTGTTTCATCGGTTGACAAAAAATTGGAAGTAAAGCAGCGGTTCCTTGAAATTTTTCAGGAAGAAAATTATCCAACAGAGTTCCCATATAAATCTAAGGTTGTATTGTTGTTTCAGAAAATTGAAGGTGTAGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGAGCTGAAAGCCAGTTTCCAAATCAGCGCCGTGTTTATCTATCGTACTTGGATTCTGTTAAGTATTTCAGGCCTGAGGTTAAAGCGGTCACGGGTGAGGCTCTCCGCACATATGTTTACCATGAAATTTTGATTGGATACCTTGAATATTGCAAGCTACGAGGGTTTACAAGCTGCTATATATGGGCTTGTCCTCCGTTGAAGGGTGAAGATTATATTCTATATTGTCATCCGGAGATTCAGAAAACACCAAAATCTGATAAGCTTCGTGAATGGTATTTGGCAATGCTTAGGAAAGCTGCCAAGGAAGGCATTGTTGTTGAACTCACTAATCTATATGACCATTTCTTTGTAACTACTGCTGAATGCAAGGCCAAAGTCACTGCAGCTAGGTGGCCCTATTTTGATGGTGACTACTGGCCTGGTGCAGCCGAGGATCGATCAACGGTGATTAATCAGATGCGTCAAGAAGAGGACGGGAGAAAACAGAATAAGAAAGGATCAACCAAAAAGACTATAACAAAAAGGGCTCTAAAAGCTTCTGGTCAGACTGATCTTTCTGCTAACGCGTCAAAGGATCTGCTACTAATGCACAAACTTGGAGAAACCATTTCACCAATGAAGGAGGATTTCATCATGGTTCATTTGCAGTACGCATGCTCTCACTGTTGTATACTAATGGTATCAGGAAACCGTTGGTCCTGCACTCAATGCAGAAATTTTCAGCTTTGTGATAAGTGTTATGAAGCAGAGCAAAAACGGGAAGAAAGAGACAGGCACCCTATCAATCTGAGGGAAAAACATGAATTGCGTACTTTTCAAATTACTGATGTACCTATGGAGACAAAGGACAGAGATGAAATTCTTGAGAGTGAATTCTTTGACACTAGACAGGCATTTCTCAGTCTTTGTCAAGGGAATCATTATCAGTATGATACTTTACGGCGGGCTAAACATTCCTCTATCATGGTCCTTTACCATCTTCATAACCCAACTGCTCCTGCGTTTGTGACACCATGCAATATATGTCATCTTGACATTGAAACAGGGCAAGGTTGGCGTTGTGAAGTTTGCCCTGAATACGATGTGTGCAATAACTGTTATCAGAAGGAAGGCGGTGTAGATCGATCATCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004402 GO:0006325 GO:0006464 GO:0006473 GO:0006475 GO:0006807 GO:0006996 GO:0007275 GO:0008080 GO:0008150 GO:0008152 GO:0009791 GO:0009908 GO:0009987 GO:0016043 GO:0016407 GO:0016410 GO:0016569 GO:0016570 GO:0016573 GO:0016740 GO:0016746 GO:0016747 GO:0018193 GO:0018205 GO:0018393 GO:0018394 GO:0019538 GO:0022414 GO:0032501 GO:0032502 GO:0034212 GO:0036211 GO:0043170 GO:0043412 GO:0043543 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0048367 GO:0048608 GO:0048731 GO:0048856 GO:0051276 GO:0061458 GO:0061733 GO:0071704 GO:0071840 GO:0090567 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko04024 ko04066 ko04068 ko04110 ko04310 ko04330 ko04350 ko04520 ko04630 ko04720 ko04916 ko04919 ko04922 ko05016 ko05152 ko05161 ko05164 ko05165 ko05166 ko05167 ko05168 ko05169 ko05200 ko05203 ko05206 ko05211 ko05215 map04024 map04066 map04068 map04110 map04310 map04330 map04350 map04520 map04630 map04720 map04916 map04919 map04922 map05016 map05152 map05161 map05164 map05165 map05166 map05167 map05168 map05169 map05200 map05203 map05206 map05211 map05215

Pfam Domains

Protein Families

HAT_KAT11 PHD ZZ zf-TAZ

Protein Analysis

1611

Amino Acids

180.92

Weight (kDa)

7.76

Isoelectric Point (pI)

54.77

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-TAZ	PF02135	682 - 751	2.1e-15	TAZ zinc finger
PHD	PF00628	1068 - 1108	8.2e-06	PHD-finger
HAT_KAT11	PF08214	1166 - 1379	7.8e-36	Histone acetylation protein
ZZ	PF00569	1447 - 1484	3.4e-06	Zinc finger, ZZ type
ZZ	PF00569	1570 - 1602	7.2e-06	Zinc finger, ZZ type

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0003246)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G16710 AT1G79000 AT1G79000 AT1G79000
fragaria_vesca	FvH4_6g36320 FvH4_6g36320 FvH4_6g36320 FvH4_6g36320 FvH4_6g36320 FvH4_6g36320 FvH4_6g36320
malus_domestica	MD09G1170000.v1.1 MD17G1157200.v1.1 MD17G1157500.v1.1
prunus_persica	Prupe.3G028200_v2.0.a1 Prupe.3G028200_v2.0.a1 Prupe.3G028200_v2.0.a1
pyrus_communis	pycom09g08750 pycom17g15040
rosa_chinensis	RchiOBHm_Chr2g0148331
rosa_laevigata	RLG00000020340
rosa_roxburghii	Rroxscaffold_2G00098860
rosa_rugosa	Rorug02G0405800
rosa_samantha	Rh2AG464900 Rh2BG477500 Rh2CG451300 Rh2DG486400
rosa_wichuraiana	Rw2G037880

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1204
Acc16I	TGCGCA	1 cut(s)	1659
Acc36I	ACCTGC	1 cut(s)	2869
AccB1I	GGYRCC	3 cut(s)	556, 566, 4473
AccB7I	CCANNNNNTGG	1 cut(s)	437
AccI	GTMKAC	2 cut(s)	853, 4369
AccII	CGCG	2 cut(s)	2109, 4265
AccIII	TCCGGA	1 cut(s)	3928
AclI	AACGTT	1 cut(s)	329
AclWI	GGATC	8 cut(s)	67, 149, 162, 1520, 2350, 4140, 4204, 4281
AcoI	YGGCCR	3 cut(s)	1070, 2917, 3277
AcuI	CTGAAG	6 cut(s)	6, 1911, 2358, 2439, 3231, 3467
AdeI	CACNNNGTG	1 cut(s)	452
AfaI	GTAC	8 cut(s)	517, 784, 1585, 3071, 3743, 4349, 4510, 4530
AfeI	AGCGCT	1 cut(s)	295
AfiI	CCNNNNNNNGG	6 cut(s)	35, 437, 713, 1155, 2926, 3899
AflIII	ACRYGT	2 cut(s)	1845, 4263
AjnI	CCWGG	8 cut(s)	228, 436, 712, 1123, 1866, 2535, 3502, 4117
AjuI	GAANNNNNNNTTGG	2 cut(s)	3813, 3845
AleI	CACNNNNGTG	1 cut(s)	1560
AloI	GAACNNNNNNTCC	2 cut(s)	2018, 2050
Alw21I	GWGCWC	4 cut(s)	78, 175, 1258, 1795
Alw44I	GTGCAC	2 cut(s)	171, 1254
AlwI	GGATC	8 cut(s)	67, 149, 162, 1520, 2350, 4140, 4204, 4281
Aor13HI	TCCGGA	1 cut(s)	3928
Aor51HI	AGCGCT	1 cut(s)	295
ApaI	GGGCCC	1 cut(s)	2890
ApaLI	GTGCAC	2 cut(s)	171, 1254
ArsI	GACNNNNNNTTYG	2 cut(s)	4028, 4060
AseI	ATTAAT	1 cut(s)	4149
Asp700I	GAANNNNTTC	3 cut(s)	1343, 2033, 3582
AspLEI	GCGC	6 cut(s)	296, 529, 1660, 2070, 3060, 3726
AsuC2I	CCSGG	2 cut(s)	323, 1675
AvaII	GGWCC	7 cut(s)	26, 1552, 1934, 2233, 3223, 4395, 4666
AxyI	CCTNAGG	1 cut(s)	3771
BaeGI	GKGCMC	6 cut(s)	48, 175, 561, 1258, 2535, 2890
BaeI	ACNNNNGTAYC	2 cut(s)	4512, 4545
BalI	TGGCCA	1 cut(s)	2919
BamHI	GGATCC	1 cut(s)	154
BanI	GGYRCC	3 cut(s)	556, 566, 4473
BanII	GRGCYC	5 cut(s)	937, 1795, 2721, 2890, 4228
BarI	GAAGNNNNNNTAC	2 cut(s)	1678, 1710
BauI	CACGAG	2 cut(s)	135, 3132
BbsI	GAAGAC	3 cut(s)	1917, 2373, 2399
Bbv12I	GWGCWC	4 cut(s)	78, 175, 1258, 1795
BceAI	ACGGC	3 cut(s)	834, 3711, 4655
BciT130I	CCWGG	8 cut(s)	230, 438, 714, 1125, 1868, 2537, 3504, 4119
BciVI	GTATCC	1 cut(s)	3827
BclI	TGATCA	1 cut(s)	1291
BcnI	CCSGG	2 cut(s)	323, 1675
BfaI	CTAG	8 cut(s)	507, 1962, 1992, 2306, 2379, 3182, 4086, 4584
BfmI	CTRYAG	2 cut(s)	2496, 4080
BfoI	RGCGCY	3 cut(s)	297, 530, 3727
BfuAI	ACCTGC	1 cut(s)	2869
BfuI	GTATCC	1 cut(s)	3827
BglI	GCCNNNNNGGC	1 cut(s)	3675
BglII	AGATCT	1 cut(s)	593
BlpI	GCTNAGC	1 cut(s)	2733
BmcAI	AGTACT	1 cut(s)	517
Bme18I	GGWCC	7 cut(s)	26, 1552, 1934, 2233, 3223, 4395, 4666
BmsI	GCATC	8 cut(s)	57, 478, 1483, 1599, 1744, 1816, 1870, 4146
BpiI	GAAGAC	3 cut(s)	1917, 2373, 2399
BplI	GAGNNNNNCTC	2 cut(s)	2447, 2479
BpmI	CTGGAG	4 cut(s)	675, 1809, 1850, 2856
Bpu10I	CCTNAGC	2 cut(s)	297, 3986
Bpu1102I	GCTNAGC	1 cut(s)	2733
BpuEI	CTTGAG	4 cut(s)	1689, 1779, 2774, 4583
BpuMI	CCSGG	2 cut(s)	323, 1675
Bsa29I	ATCGAT	2 cut(s)	4135, 4822
BsaBI	GATNNNNATC	1 cut(s)	159
BsaI	GGTCTC	1 cut(s)	2906
BsaWI	WCCGGW	1 cut(s)	3928
BsaXI	ACNNNNNCTCC	2 cut(s)	2018, 2048
Bsc4I	CCNNNNNNNGG	6 cut(s)	35, 437, 713, 1155, 2926, 3899
Bse21I	CCTNAGG	1 cut(s)	3771
Bse3DI	GCAATG	4 cut(s)	240, 2958, 3072, 3987
Bse8I	GATNNNNATC	1 cut(s)	159
BseAI	TCCGGA	1 cut(s)	3928
BseBI	CCWGG	8 cut(s)	230, 438, 714, 1125, 1868, 2537, 3504, 4119
BseCI	ATCGAT	2 cut(s)	4135, 4822
BseGI	GGATG	8 cut(s)	280, 493, 1670, 1735, 1807, 2179, 2281, 3925
BseJI	GATNNNNATC	1 cut(s)	159
BseLI	CCNNNNNNNGG	6 cut(s)	35, 437, 713, 1155, 2926, 3899
BseMI	GCAATG	4 cut(s)	240, 2958, 3072, 3987
BseRI	GAGGAG	2 cut(s)	1311, 1681
BseSI	GKGCMC	6 cut(s)	48, 175, 561, 1258, 2535, 2890
BseYI	CCCAGC	3 cut(s)	81, 1473, 2236
BsgI	GTGCAG	4 cut(s)	206, 3012, 4143, 4384
Bsh1236I	CGCG	2 cut(s)	2109, 4265
BshNI	GGYRCC	3 cut(s)	556, 566, 4473
BshVI	ATCGAT	2 cut(s)	4135, 4822
BsiHKAI	GWGCWC	4 cut(s)	78, 175, 1258, 1795
BsiSI	CCGG	4 cut(s)	323, 1675, 2402, 3929
BslFI	GGGAC	3 cut(s)	1834, 1962, 3172
BslI	CCNNNNNNNGG	6 cut(s)	35, 437, 713, 1155, 2926, 3899
BsmFI	GGGAC	3 cut(s)	1834, 1962, 3172
BsmI	GAATGC	4 cut(s)	1660, 2959, 3376, 4067
Bso31I	GGTCTC	1 cut(s)	2906
Bsp120I	GGGCCC	1 cut(s)	2886
Bsp13I	TCCGGA	1 cut(s)	3928
Bsp1720I	GCTNAGC	1 cut(s)	2733
Bsp68I	TCGCGA	1 cut(s)	2109
BspDI	ATCGAT	2 cut(s)	4135, 4822
BspEI	TCCGGA	1 cut(s)	3928
BspFNI	CGCG	2 cut(s)	2109, 4265
BspMAI	CTGCAG	2 cut(s)	2500, 4084
BspMI	ACCTGC	1 cut(s)	2869
BspPI	GGATC	8 cut(s)	67, 149, 162, 1520, 2350, 4140, 4204, 4281
BspT107I	GGYRCC	3 cut(s)	556, 566, 4473
BspTNI	GGTCTC	1 cut(s)	2906
BsrDI	GCAATG	4 cut(s)	240, 2958, 3072, 3987
BssNAI	GTATAC	2 cut(s)	854, 4370
BssSI	CACGAG	2 cut(s)	135, 3132
BssT1I	CCWWGG	4 cut(s)	865, 1209, 3398, 3999
Bst1107I	GTATAC	2 cut(s)	854, 4370
Bst2BI	CACGAG	2 cut(s)	135, 3132
Bst2UI	CCWGG	8 cut(s)	230, 438, 714, 1125, 1868, 2537, 3504, 4119
Bst6I	CTCTTC	5 cut(s)	1036, 1699, 3198, 3207, 4161
BstAPI	GCANNNNNTGC	2 cut(s)	3039, 4407
BstEII	GGTNACC	1 cut(s)	1433
BstF5I	GGATG	8 cut(s)	280, 493, 1670, 1735, 1807, 2179, 2281, 3925
BstFNI	CGCG	2 cut(s)	2109, 4265
BstH2I	RGCGCY	3 cut(s)	297, 530, 3727
BstHHI	GCGC	6 cut(s)	296, 529, 1660, 2070, 3060, 3726
BstNI	CCWGG	8 cut(s)	230, 438, 714, 1125, 1868, 2537, 3504, 4119
BstNSI	RCATGY	5 cut(s)	904, 1849, 2160, 3682, 4356
BstPI	GGTNACC	1 cut(s)	1433
BstSFI	CTRYAG	2 cut(s)	2496, 4080
BstSLI	GKGCMC	6 cut(s)	48, 175, 561, 1258, 2535, 2890
BstUI	CGCG	2 cut(s)	2109, 4265
BstV2I	GAAGAC	3 cut(s)	1917, 2373, 2399
BstX2I	RGATCY	4 cut(s)	59, 154, 593, 4273
BstXI	CCANNNNNNTGG	2 cut(s)	89, 2206
BstYI	RGATCY	4 cut(s)	59, 154, 593, 4273
BstZ17I	GTATAC	2 cut(s)	854, 4370
Bsu15I	ATCGAT	2 cut(s)	4135, 4822
Bsu36I	CCTNAGG	1 cut(s)	3771
BsuI	GTATCC	1 cut(s)	3827
BsuTUI	ATCGAT	2 cut(s)	4135, 4822
BtsCI	GGATG	8 cut(s)	280, 493, 1670, 1735, 1807, 2179, 2281, 3925
BtsI	GCAGTG	3 cut(s)	1111, 2915, 4077
BtsIMutI	CAGTG	7 cut(s)	457, 561, 978, 1111, 2915, 4077, 4360
BtuMI	TCGCGA	1 cut(s)	2109
BveI	ACCTGC	1 cut(s)	2869
CfoI	GCGC	6 cut(s)	296, 529, 1660, 2070, 3060, 3726
ClaI	ATCGAT	2 cut(s)	4135, 4822
CseI	GACGC	3 cut(s)	2378, 4148, 4254
Csp6I	GTAC	8 cut(s)	516, 783, 1584, 3070, 3742, 4348, 4509, 4529
CviQI	GTAC	8 cut(s)	516, 783, 1584, 3070, 3742, 4348, 4509, 4529
DraIII	CACNNNGTG	1 cut(s)	452
DrdI	GACNNNNNNGTC	1 cut(s)	1204
DseDI	GACNNNNNNGTC	1 cut(s)	1204
EaeI	YGGCCR	3 cut(s)	1070, 2917, 3277
Eam1104I	CTCTTC	5 cut(s)	1036, 1699, 3198, 3207, 4161
EarI	CTCTTC	5 cut(s)	1036, 1699, 3198, 3207, 4161
Ecl136II	GAGCTC	1 cut(s)	1793
Eco130I	CCWWGG	4 cut(s)	865, 1209, 3398, 3999
Eco147I	AGGCCT	1 cut(s)	3769
Eco24I	GRGCYC	5 cut(s)	937, 1795, 2721, 2890, 4228
Eco31I	GGTCTC	1 cut(s)	2906
Eco32I	GATATC	2 cut(s)	33, 1890
Eco47I	GGWCC	7 cut(s)	26, 1552, 1934, 2233, 3223, 4395, 4666
Eco47III	AGCGCT	1 cut(s)	295
Eco53kI	GAGCTC	1 cut(s)	1793
Eco57I	CTGAAG	6 cut(s)	6, 1911, 2358, 2439, 3231, 3467
Eco81I	CCTNAGG	1 cut(s)	3771
Eco91I	GGTNACC	1 cut(s)	1433
EcoICRI	GAGCTC	1 cut(s)	1793
EcoO109I	RGGNCCY	2 cut(s)	2233, 2886
EcoO65I	GGTNACC	1 cut(s)	1433
EcoRI	GAATTC	4 cut(s)	457, 1183, 2329, 4571
EcoRII	CCWGG	8 cut(s)	228, 436, 712, 1123, 1866, 2535, 3502, 4117
EcoRV	GATATC	2 cut(s)	33, 1890
EcoT14I	CCWWGG	4 cut(s)	865, 1209, 3398, 3999
EcoT22I	ATGCAT	2 cut(s)	1251, 1614
EcoT38I	GRGCYC	5 cut(s)	937, 1795, 2721, 2890, 4228
ErhI	CCWWGG	4 cut(s)	865, 1209, 3398, 3999
FaqI	GGGAC	3 cut(s)	1834, 1962, 3172
FauI	CCCGC	4 cut(s)	938, 2262, 2728, 4635
FauNDI	CATATG	1 cut(s)	3808
FbaI	TGATCA	1 cut(s)	1291
FblI	GTMKAC	2 cut(s)	853, 4369
FokI	GGATG	8 cut(s)	287, 500, 1657, 1722, 1794, 2166, 2268, 3912
FriOI	GRGCYC	5 cut(s)	937, 1795, 2721, 2890, 4228
FspBI	CTAG	8 cut(s)	507, 1962, 1992, 2306, 2379, 3182, 4086, 4584
FspI	TGCGCA	1 cut(s)	1659
GlaI	GCGC	6 cut(s)	295, 528, 1659, 2069, 3059, 3725
GsaI	CCCAGC	3 cut(s)	85, 1477, 2240
GsuI	CTGGAG	4 cut(s)	675, 1809, 1850, 2856
HaeII	RGCGCY	3 cut(s)	297, 530, 3727
HapII	CCGG	4 cut(s)	323, 1675, 2402, 3929
HgaI	GACGC	3 cut(s)	2378, 4148, 4254
HhaI	GCGC	6 cut(s)	296, 529, 1660, 2070, 3060, 3726
Hin6I	GCGC	6 cut(s)	294, 527, 1658, 2068, 3058, 3724
HinP1I	GCGC	6 cut(s)	294, 527, 1658, 2068, 3058, 3724
HincII	GTYRAC	4 cut(s)	541, 1448, 1843, 3544
HindII	GTYRAC	4 cut(s)	541, 1448, 1843, 3544
HindIII	AAGCTT	5 cut(s)	1707, 3002, 3243, 3959, 4233
HpaII	CCGG	4 cut(s)	323, 1675, 2402, 3929
HpyCH4IV	ACGT	3 cut(s)	329, 1444, 2113
HpySE526I	ACGT	3 cut(s)	329, 1444, 2113
HspAI	GCGC	6 cut(s)	294, 527, 1658, 2068, 3058, 3724
Kpn2I	TCCGGA	1 cut(s)	3928
Ksp22I	TGATCA	1 cut(s)	1291
LmnI	GCTCC	5 cut(s)	109, 1790, 2956, 3698, 4699
LweI	GCATC	8 cut(s)	57, 478, 1483, 1599, 1744, 1816, 1870, 4146
MaeI	CTAG	8 cut(s)	507, 1962, 1992, 2306, 2379, 3182, 4086, 4584
MaeII	ACGT	3 cut(s)	329, 1444, 2113
MfeI	CAATTG	3 cut(s)	1295, 1938, 2135
MflI	RGATCY	4 cut(s)	59, 154, 593, 4273
MlsI	TGGCCA	1 cut(s)	2919
MluI	ACGCGT	1 cut(s)	4263
MluNI	TGGCCA	1 cut(s)	2919
MlyI	GAGTC	4 cut(s)	346, 992, 1766, 1837
MmeI	TCCRAC	1 cut(s)	3626
Mox20I	TGGCCA	1 cut(s)	2919
Mph1103I	ATGCAT	2 cut(s)	1251, 1614
MroI	TCCGGA	1 cut(s)	3928
MroXI	GAANNNNTTC	3 cut(s)	1343, 2033, 3582
MscI	TGGCCA	1 cut(s)	2919
MslI	CAYNNNNRTG	3 cut(s)	834, 1560, 2694
Msp20I	TGGCCA	1 cut(s)	2919
MspA1I	CMGCKG	4 cut(s)	1069, 2723, 2813, 3568
MspI	CCGG	4 cut(s)	323, 1675, 2402, 3929
MunI	CAATTG	3 cut(s)	1295, 1938, 2135
Mva1269I	GAATGC	4 cut(s)	1660, 2959, 3376, 4067
MvaI	CCWGG	8 cut(s)	230, 438, 714, 1125, 1868, 2537, 3504, 4119
MvnI	CGCG	2 cut(s)	2109, 4265
NciI	CCSGG	2 cut(s)	323, 1675
NdeI	CATATG	1 cut(s)	3808
NmeAIII	GCCGAG	2 cut(s)	2056, 4153
NruI	TCGCGA	1 cut(s)	2109
NsbI	TGCGCA	1 cut(s)	1659
NsiI	ATGCAT	2 cut(s)	1251, 1614
NspI	RCATGY	5 cut(s)	904, 1849, 2160, 3682, 4356
OliI	CACNNNNGTG	1 cut(s)	1560
PaeI	GCATGC	2 cut(s)	904, 4356
PasI	CCCWGGG	1 cut(s)	713
PceI	AGGCCT	1 cut(s)	3769
PciI	ACATGT	1 cut(s)	1845
PctI	GAATGC	4 cut(s)	1660, 2959, 3376, 4067
PdmI	GAANNNNTTC	3 cut(s)	1343, 2033, 3582
PflMI	CCANNNNNTGG	1 cut(s)	437
PfoI	TCCNGGA	1 cut(s)	1866
PleI	GAGTC	4 cut(s)	345, 991, 1765, 1836
PpsI	GAGTC	4 cut(s)	345, 991, 1765, 1836
PpuMI	RGGWCCY	1 cut(s)	2233
PscI	ACATGT	1 cut(s)	1845
PshBI	ATTAAT	1 cut(s)	4149
Psp124BI	GAGCTC	1 cut(s)	1795
Psp1406I	AACGTT	1 cut(s)	329
Psp5II	RGGWCCY	1 cut(s)	2233
Psp6I	CCWGG	8 cut(s)	228, 436, 712, 1123, 1866, 2535, 3502, 4117
PspEI	GGTNACC	1 cut(s)	1433
PspFI	CCCAGC	3 cut(s)	81, 1473, 2236
PspGI	CCWGG	8 cut(s)	228, 436, 712, 1123, 1866, 2535, 3502, 4117
PspOMI	GGGCCC	1 cut(s)	2886
PspPPI	RGGWCCY	1 cut(s)	2233
PstI	CTGCAG	2 cut(s)	2500, 4084
PsuI	RGATCY	4 cut(s)	59, 154, 593, 4273
PvuII	CAGCTG	1 cut(s)	2813
RruI	TCGCGA	1 cut(s)	2109
RsaI	GTAC	8 cut(s)	517, 784, 1585, 3071, 3743, 4349, 4510, 4530
RsaNI	GTAC	8 cut(s)	516, 783, 1584, 3070, 3742, 4348, 4509, 4529
RseI	CAYNNNNRTG	3 cut(s)	834, 1560, 2694
SacI	GAGCTC	1 cut(s)	1795
ScaI	AGTACT	1 cut(s)	517
SchI	GAGTC	4 cut(s)	346, 992, 1766, 1837
SfaNI	GCATC	8 cut(s)	57, 478, 1483, 1599, 1744, 1816, 1870, 4146
SfcI	CTRYAG	2 cut(s)	2496, 4080
SinI	GGWCC	7 cut(s)	26, 1552, 1934, 2233, 3223, 4395, 4666
SmiMI	CAYNNNNRTG	3 cut(s)	834, 1560, 2694
SmlI	CTYRAG	4 cut(s)	1704, 1794, 2753, 4562
SmoI	CTYRAG	4 cut(s)	1704, 1794, 2753, 4562
SphI	GCATGC	2 cut(s)	904, 4356
SseBI	AGGCCT	1 cut(s)	3769
SspI	AATATT	2 cut(s)	1342, 3845
SspMI	CTAG	8 cut(s)	507, 1962, 1992, 2306, 2379, 3182, 4086, 4584
SstI	GAGCTC	1 cut(s)	1795
StuI	AGGCCT	1 cut(s)	3769
StyI	CCWWGG	4 cut(s)	865, 1209, 3398, 3999
TaiI	ACGT	3 cut(s)	332, 1447, 2116
TaqI	TCGA	4 cut(s)	1196, 2005, 4135, 4822
TaqII	GACCGA	1 cut(s)	43
TatI	WGTACW	3 cut(s)	515, 782, 3069
TauI	GCSGC	2 cut(s)	582, 1072
TscAI	CASTG	7 cut(s)	457, 568, 978, 1111, 2915, 4084, 4367
TspGWI	ACGGA	4 cut(s)	158, 634, 1868, 3882
TspRI	CASTG	7 cut(s)	457, 568, 978, 1111, 2915, 4084, 4367
Van91I	CCANNNNNTGG	1 cut(s)	437
VneI	GTGCAC	2 cut(s)	171, 1254
VpaK11BI	GGWCC	7 cut(s)	26, 1552, 1934, 2233, 3223, 4395, 4666
VspI	ATTAAT	1 cut(s)	4149
XbaI	TCTAGA	1 cut(s)	1961
XceI	RCATGY	5 cut(s)	904, 1849, 2160, 3682, 4356
XcmI	CCANNNNNNNNNTGG	1 cut(s)	881
XmiI	GTMKAC	2 cut(s)	853, 4369
XmnI	GAANNNNTTC	3 cut(s)	1343, 2033, 3582
XspI	CTAG	8 cut(s)	507, 1962, 1992, 2306, 2379, 3182, 4086, 4584
ZrmI	AGTACT	1 cut(s)	517
Zsp2I	ATGCAT	2 cut(s)	1251, 1614

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.