pycom17g19210

Belongs to the hexokinase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr17
Physical Location & Seq
Forward (+)
16912440 .. 16915333
2894 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1077 bp
ATGGGGAAGAAGGCGGTGATAATCGTTACTGCGACGGCAGTGTGCGCCGCGGCAGCGGTTCTGGTGGTGCGCCACCGCATGCGGAACTCGGGACGGTGGGCCCGGGCATCGGCCATCATCAAGGAGCTCGAGGAGAAGTGTGGGACCCCCACTGGGAAGCTGAGGCAGGTGGCTGACGCCATGGCTGTCGAGATGCATGCCGGCCTCGCCTCCGAAGGTGGCAGCAAGCTCAAGATGATCATTAGCTACGTCGACAATCTCCCTACTGGTAATGAGAAAGGGTTGTTTTATGCATTGGATCTCGGAGGAACAAACTTCCGTGTAATGAGGGTGCAATTGGGAGGAAAGGGTCGTGGAATTATTAGCCAAGAATTTACTGAGGTCTCAATTCCTGAAAATCTTATGGTCGGGACTTCAGATGCACTCTTTGACTACATTGCGGCAGAACTTGCTAAGTTTGTTGCTAAAGAAGGTCAAGATTATCAACTCCCTCCTGGCAGGCAGAGAGAACTAGGTTTTACCTTCTCATTCCCTGTGCTGCAATCATCAATTAATTCAGGGACCCTTATTAAGTGGACGAAAGGCTTTTCTATAGATGATGCAGTTGGGCAAGATGTAGTGGCTGAATTGAGTAAAGCCATTGAAAGAACCGGCCTCGATATGCGTGTATCTGCTCTGGTTAATGACACGGTTGGGACATTAGCTGGAGGTAGGTATGTCAATCAGGATGTTATTGCTGCTGTGATTTTAGGTACAGGGACAAATGCAGCATATGTGGAACGTGCACATGCAATACCAAAATGGCATGGTCTGCTACCTAAATCAGGAGAGATGGTTGTCAACATGGAGTGGGGTAACTTTAAGTCAGCTCACCTTCCATTGACAGAATATGATCACTCATTGGATACTGAAAGTTTGAACCGTGGTGATCAGATTTTTGAGAAGATAATTTCTGGAATGTACTTGGGAGAAATTGTTCGCAGAGTTCTTTGTAGGATTGCTGACGAAGCTTCCCTTTTTGGTGACACTGTTCCACCAAAGTTAAATGTTCCTTTCATTTTGAGGCAGGACACCTGA

Protein Analysis

359

Amino Acids

38.83

Weight (kDa)

6.62

Isoelectric Point (pI)

26.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Hexokinase_1 PF00349 40 - 239 3e-74 Hexokinase
Hexokinase_2 PF03727 246 - 355 3e-40 Hexokinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 157
Acc36I ACCTGC 1 cut(s) 157
AccI GTMKAC 1 cut(s) 252
AccII CGCG 1 cut(s) 50
AciI CCGC 7 cut(s) 14, 48, 50, 56, 76, 82, 440
AclWI GGATC 1 cut(s) 306
AcoI YGGCCR 1 cut(s) 111
AcsI RAATTY 1 cut(s) 371
AcuI CTGAAG 1 cut(s) 399
AcyI GRCGYC 1 cut(s) 177
AfaI GTAC 2 cut(s) 754, 962
AfiI CCNNNNNNNGG 3 cut(s) 109, 153, 824
AgsI TTSAA 2 cut(s) 644, 919
AjnI CCWGG 1 cut(s) 493
AloI GAACNNNNNNTCC 2 cut(s) 960, 992
AluBI AGCT 7 cut(s) 127, 160, 229, 246, 704, 869, 1010
AluI AGCT 7 cut(s) 127, 160, 229, 246, 704, 869, 1010
Alw21I GWGCWC 2 cut(s) 129, 787
Alw26I GTCTC 1 cut(s) 388
Alw44I GTGCAC 1 cut(s) 783
AlwI GGATC 1 cut(s) 306
Ama87I CYCGRG 3 cut(s) 88, 102, 128
AoxI GGCC 4 cut(s) 99, 111, 202, 652
ApaI GGGCCC 1 cut(s) 103
ApaLI GTGCAC 1 cut(s) 783
ApeKI GCWGC 5 cut(s) 53, 222, 538, 737, 767
ApoI RAATTY 1 cut(s) 371
AseI ATTAAT 1 cut(s) 552
Asp700I GAANNNNTTC 1 cut(s) 975
AspLEI GCGC 2 cut(s) 47, 72
AspS9I GGNCC 4 cut(s) 99, 100, 144, 561
AsuC2I CCSGG 2 cut(s) 103, 104
AsuHPI GGTGA 4 cut(s) 28, 863, 938, 1034
AvaI CYCGRG 3 cut(s) 88, 102, 128
AvaII GGWCC 2 cut(s) 144, 561
BaeGI GKGCMC 2 cut(s) 103, 787
BanII GRGCYC 2 cut(s) 103, 129
Bbv12I GWGCWC 2 cut(s) 129, 787
BbvCI CCTCAGC 1 cut(s) 161
BbvI GCAGC 5 cut(s) 65, 234, 525, 724, 779
BccI CCATC 2 cut(s) 122, 826
BceAI ACGGC 1 cut(s) 51
BcgI CGANNNNNNTGC 2 cut(s) 179, 213
BciT130I CCWGG 1 cut(s) 495
BciVI GTATCC 1 cut(s) 898
BclI TGATCA 3 cut(s) 237, 892, 928
BcnI CCSGG 2 cut(s) 103, 104
BcoDI GTCTC 1 cut(s) 388
BfaI CTAG 1 cut(s) 512
BfmI CTRYAG 1 cut(s) 591
BfuAI ACCTGC 1 cut(s) 157
BfuI GTATCC 1 cut(s) 898
BisI GCNGC 8 cut(s) 48, 51, 54, 223, 441, 539, 738, 768
BlsI GCNGC 8 cut(s) 49, 52, 55, 224, 442, 540, 739, 769
Bme1390I CCNGG 3 cut(s) 103, 104, 495
Bme18I GGWCC 2 cut(s) 144, 561
BmeT110I CYCGRG 3 cut(s) 88, 102, 128
BmgT120I GGNCC 4 cut(s) 99, 100, 144, 561
BmiI GGNNCC 5 cut(s) 101, 145, 146, 562, 563
BmrFI CCNGG 3 cut(s) 103, 104, 495
BmrI ACTGGG 1 cut(s) 162
BmsI GCATC 4 cut(s) 116, 183, 409, 589
BmuI ACTGGG 1 cut(s) 162
BpmI CTGGAG 1 cut(s) 726
Bpu10I CCTNAGC 1 cut(s) 161
BpuEI CTTGAG 1 cut(s) 215
BpuMI CCSGG 2 cut(s) 103, 104
BsaHI GRCGYC 1 cut(s) 177
BsaI GGTCTC 1 cut(s) 388
BsaJI CCNNGG 4 cut(s) 48, 102, 180, 922
BsaXI ACNNNNNCTCC 4 cut(s) 819, 849, 960, 990
Bsc4I CCNNNNNNNGG 3 cut(s) 109, 153, 824
Bse118I RCCGGY 2 cut(s) 200, 650
Bse1I ACTGG 2 cut(s) 157, 271
Bse3DI GCAATG 1 cut(s) 435
BseBI CCWGG 1 cut(s) 495
BseDI CCNNGG 4 cut(s) 48, 102, 180, 922
BseGI GGATG 1 cut(s) 733
BseLI CCNNNNNNNGG 3 cut(s) 109, 153, 824
BseMI GCAATG 1 cut(s) 435
BseMII CTCAG 2 cut(s) 152, 369
BseNI ACTGG 2 cut(s) 157, 271
BseRI GAGGAG 1 cut(s) 146
BseSI GKGCMC 2 cut(s) 103, 787
BseXI GCAGC 5 cut(s) 65, 234, 525, 724, 779
Bsh1236I CGCG 1 cut(s) 50
BshFI GGCC 4 cut(s) 101, 113, 204, 654
BsiHKAI GWGCWC 2 cut(s) 129, 787
BsiHKCI CYCGRG 3 cut(s) 88, 102, 128
BsiSI CCGG 3 cut(s) 103, 201, 651
BslFI GGGAC 6 cut(s) 105, 157, 424, 574, 709, 772
BslI CCNNNNNNNGG 3 cut(s) 109, 153, 824
BsmAI GTCTC 1 cut(s) 388
BsmFI GGGAC 6 cut(s) 105, 157, 424, 574, 709, 772
BsnI GGCC 4 cut(s) 101, 113, 204, 654
Bso31I GGTCTC 1 cut(s) 388
BsoBI CYCGRG 3 cut(s) 88, 102, 128
Bsp120I GGGCCC 1 cut(s) 99
Bsp1286I GDGCHC 3 cut(s) 103, 129, 787
Bsp143I GATC 4 cut(s) 237, 298, 892, 928
Bsp19I CCATGG 1 cut(s) 180
BspACI CCGC 7 cut(s) 14, 48, 50, 56, 76, 82, 440
BspANI GGCC 4 cut(s) 101, 113, 204, 654
BspCNI CTCAG 2 cut(s) 153, 370
BspFNI CGCG 1 cut(s) 50
BspLI GGNNCC 5 cut(s) 101, 145, 146, 562, 563
BspMI ACCTGC 1 cut(s) 157
BspPI GGATC 1 cut(s) 306
BspTNI GGTCTC 1 cut(s) 388
BsrDI GCAATG 1 cut(s) 435
BsrFI RCCGGY 2 cut(s) 200, 650
BsrI ACTGG 2 cut(s) 157, 271
BssAI RCCGGY 2 cut(s) 200, 650
BssECI CCNNGG 4 cut(s) 48, 102, 180, 922
BssMI GATC 4 cut(s) 237, 298, 892, 928
BssNI GRCGYC 1 cut(s) 177
BssT1I CCWWGG 1 cut(s) 180
Bst2UI CCWGG 1 cut(s) 495
Bst4CI ACNGT 4 cut(s) 96, 691, 923, 1030
BstACI GRCGYC 1 cut(s) 177
BstAPI GCANNNNNTGC 2 cut(s) 449, 811
BstC8I GCNNGC 5 cut(s) 80, 198, 202, 227, 500
BstDEI CTNAG 3 cut(s) 161, 378, 453
BstDSI CCRYGG 3 cut(s) 48, 180, 922
BstENI CCTNNNNNAGG 1 cut(s) 822
BstF5I GGATG 1 cut(s) 733
BstFNI CGCG 1 cut(s) 50
BstHHI GCGC 2 cut(s) 47, 72
BstKTI GATC 4 cut(s) 240, 301, 895, 931
BstMAI GTCTC 1 cut(s) 388
BstMBI GATC 4 cut(s) 237, 298, 892, 928
BstMWI GCNNNNNNNGC 6 cut(s) 44, 53, 206, 449, 811, 1007
BstNI CCWGG 1 cut(s) 495
BstNSI RCATGY 3 cut(s) 82, 200, 791
BstSCI CCNGG 3 cut(s) 101, 102, 493
BstSFI CTRYAG 1 cut(s) 591
BstSLI GKGCMC 2 cut(s) 103, 787
BstUI CGCG 1 cut(s) 50
BstV1I GCAGC 5 cut(s) 65, 234, 525, 724, 779
BstX2I RGATCY 1 cut(s) 298
BstYI RGATCY 1 cut(s) 298
BsuI GTATCC 1 cut(s) 898
BsuRI GGCC 4 cut(s) 101, 113, 204, 654
BtgI CCRYGG 3 cut(s) 48, 180, 922
BtsCI GGATG 1 cut(s) 733
BtsI GCAGTG 1 cut(s) 45
BtsIMutI CAGTG 3 cut(s) 45, 150, 1026
BveI ACCTGC 1 cut(s) 157
Cac8I GCNNGC 5 cut(s) 80, 198, 202, 227, 500
CfoI GCGC 2 cut(s) 47, 72
Cfr10I RCCGGY 2 cut(s) 200, 650
Cfr13I GGNCC 4 cut(s) 99, 100, 144, 561
Cfr42I CCGCGG 1 cut(s) 51
Cfr9I CCCGGG 1 cut(s) 102
CseI GACGC 1 cut(s) 185
Csp6I GTAC 2 cut(s) 753, 961
CviAII CATG 6 cut(s) 79, 181, 197, 788, 806, 844
CviQI GTAC 2 cut(s) 753, 961
DdeI CTNAG 3 cut(s) 161, 378, 453
DpnI GATC 4 cut(s) 239, 300, 894, 930
DpnII GATC 4 cut(s) 237, 298, 892, 928
EaeI YGGCCR 1 cut(s) 111
Ecl136II GAGCTC 1 cut(s) 127
Eco130I CCWWGG 1 cut(s) 180
Eco24I GRGCYC 2 cut(s) 103, 129
Eco31I GGTCTC 1 cut(s) 388
Eco47I GGWCC 2 cut(s) 144, 561
Eco53kI GAGCTC 1 cut(s) 127
Eco57I CTGAAG 1 cut(s) 399
Eco88I CYCGRG 3 cut(s) 88, 102, 128
EcoICRI GAGCTC 1 cut(s) 127
EcoNI CCTNNNNNAGG 1 cut(s) 822
EcoO109I RGGNCCY 2 cut(s) 144, 561
EcoRII CCWGG 1 cut(s) 493
EcoT14I CCWWGG 1 cut(s) 180
EcoT22I ATGCAT 2 cut(s) 198, 295
EcoT38I GRGCYC 2 cut(s) 103, 129
ErhI CCWWGG 1 cut(s) 180
FaeI CATG 6 cut(s) 82, 184, 200, 791, 809, 847
FalI AAGNNNNNCTT 2 cut(s) 999, 1031
FaqI GGGAC 6 cut(s) 105, 157, 424, 574, 709, 772
FatI CATG 6 cut(s) 78, 180, 196, 787, 805, 843
FauNDI CATATG 1 cut(s) 772
FbaI TGATCA 3 cut(s) 237, 892, 928
FblI GTMKAC 1 cut(s) 252
Fnu4HI GCNGC 8 cut(s) 48, 51, 54, 223, 441, 539, 738, 768
FokI GGATG 1 cut(s) 740
FriOI GRGCYC 2 cut(s) 103, 129
Fsp4HI GCNGC 8 cut(s) 48, 51, 54, 223, 441, 539, 738, 768
FspBI CTAG 1 cut(s) 512
GlaI GCGC 2 cut(s) 46, 71
GluI GCNGC 8 cut(s) 48, 51, 54, 223, 441, 539, 738, 768
GsuI CTGGAG 1 cut(s) 726
HaeIII GGCC 4 cut(s) 101, 113, 204, 654
HapII CCGG 3 cut(s) 103, 201, 651
HgaI GACGC 1 cut(s) 185
HhaI GCGC 2 cut(s) 47, 72
Hin1I GRCGYC 1 cut(s) 177
Hin1II CATG 6 cut(s) 82, 184, 200, 791, 809, 847
Hin6I GCGC 2 cut(s) 45, 70
HinP1I GCGC 2 cut(s) 45, 70
HincII GTYRAC 2 cut(s) 253, 841
HindII GTYRAC 2 cut(s) 253, 841
HindIII AAGCTT 1 cut(s) 1008
HpaII CCGG 3 cut(s) 103, 201, 651
HphI GGTGA 4 cut(s) 28, 863, 938, 1034
Hpy166II GTNNAC 4 cut(s) 253, 576, 785, 841
Hpy188I TCNGA 4 cut(s) 214, 305, 418, 933
Hpy188III TCNNGA 9 cut(s) 90, 190, 232, 392, 409, 476, 725, 825, 954
Hpy8I GTNNAC 4 cut(s) 253, 576, 785, 841
Hpy99I CGWCG 2 cut(s) 37, 254
HpyAV CCTTC 5 cut(s) 4, 209, 464, 532, 884
HpyCH4III ACNGT 4 cut(s) 96, 691, 923, 1030
HpyCH4IV ACGT 2 cut(s) 249, 781
HpyCH4V TGCA 9 cut(s) 196, 293, 334, 422, 541, 602, 767, 785, 791
HpyF10VI GCNNNNNNNGC 6 cut(s) 44, 53, 206, 449, 811, 1007
HpyF3I CTNAG 3 cut(s) 161, 378, 453
HpySE526I ACGT 2 cut(s) 249, 781
Hsp92I GRCGYC 1 cut(s) 177
Hsp92II CATG 6 cut(s) 82, 184, 200, 791, 809, 847
HspAI GCGC 2 cut(s) 45, 70
KflI GGGWCCC 2 cut(s) 144, 561
KroI GCCGGC 1 cut(s) 200
KroNI GCCGGC 1 cut(s) 202
Ksp22I TGATCA 3 cut(s) 237, 892, 928
KspI CCGCGG 1 cut(s) 51
Kzo9I GATC 4 cut(s) 237, 298, 892, 928
LmnI GCTCC 1 cut(s) 124
Lsp1109I GCAGC 5 cut(s) 65, 234, 525, 724, 779
LweI GCATC 4 cut(s) 116, 183, 409, 589
MaeI CTAG 1 cut(s) 512
MaeII ACGT 2 cut(s) 249, 781
MaeIII GTNAC 3 cut(s) 25, 854, 1022
MalI GATC 4 cut(s) 239, 300, 894, 930
MboI GATC 4 cut(s) 237, 298, 892, 928
MboII GAAGA 2 cut(s) 19, 955
MfeI CAATTG 1 cut(s) 335
MflI RGATCY 1 cut(s) 298
MhlI GDGCHC 3 cut(s) 103, 129, 787
MluCI AATT 9 cut(s) 335, 357, 371, 387, 549, 553, 626, 948, 972
Mph1103I ATGCAT 2 cut(s) 198, 295
MroNI GCCGGC 1 cut(s) 200
MroXI GAANNNNTTC 1 cut(s) 975
MseI TTAA 5 cut(s) 552, 570, 681, 861, 1043
MspA1I CMGCKG 2 cut(s) 50, 56
MspI CCGG 3 cut(s) 103, 201, 651
MspR9I CCNGG 3 cut(s) 103, 104, 495
MunI CAATTG 1 cut(s) 335
MvaI CCWGG 1 cut(s) 495
MvnI CGCG 1 cut(s) 50
MwoI GCNNNNNNNGC 6 cut(s) 44, 53, 206, 449, 811, 1007
NaeI GCCGGC 1 cut(s) 202
NciI CCSGG 2 cut(s) 103, 104
NcoI CCATGG 1 cut(s) 180
NdeI CATATG 1 cut(s) 772
NdeII GATC 4 cut(s) 237, 298, 892, 928
NgoMIV GCCGGC 1 cut(s) 200
NlaIII CATG 6 cut(s) 82, 184, 200, 791, 809, 847
NlaIV GGNNCC 5 cut(s) 101, 145, 146, 562, 563
NmuCI GTSAC 1 cut(s) 1022
NsiI ATGCAT 2 cut(s) 198, 295
NspI RCATGY 3 cut(s) 82, 200, 791
PaeI GCATGC 2 cut(s) 82, 200
PaeR7I CTCGAG 1 cut(s) 128
PaqCI CACCTGC 1 cut(s) 157
PdiI GCCGGC 1 cut(s) 202
PdmI GAANNNNTTC 1 cut(s) 975
PkrI GCNGC 8 cut(s) 49, 52, 55, 224, 442, 540, 739, 769
PpuMI RGGWCCY 2 cut(s) 144, 561
PshBI ATTAAT 1 cut(s) 552
Psp124BI GAGCTC 1 cut(s) 129
Psp5II RGGWCCY 2 cut(s) 144, 561
Psp6I CCWGG 1 cut(s) 493
PspGI CCWGG 1 cut(s) 493
PspN4I GGNNCC 5 cut(s) 101, 145, 146, 562, 563
PspOMI GGGCCC 1 cut(s) 99
PspPI GGNCC 4 cut(s) 99, 100, 144, 561
PspPPI RGGWCCY 2 cut(s) 144, 561
PspXI VCTCGAGB 1 cut(s) 128
PsuI RGATCY 1 cut(s) 298
RsaI GTAC 2 cut(s) 754, 962
RsaNI GTAC 2 cut(s) 753, 961
SacI GAGCTC 1 cut(s) 129
SacII CCGCGG 1 cut(s) 51
SalI GTCGAC 1 cut(s) 251
SaqAI TTAA 5 cut(s) 552, 570, 681, 861, 1043
SatI GCNGC 8 cut(s) 48, 51, 54, 223, 441, 539, 738, 768
Sau3AI GATC 4 cut(s) 237, 298, 892, 928
Sau96I GGNCC 4 cut(s) 99, 100, 144, 561
ScrFI CCNGG 3 cut(s) 103, 104, 495
SduI GDGCHC 3 cut(s) 103, 129, 787
SfaNI GCATC 4 cut(s) 116, 183, 409, 589
SfcI CTRYAG 1 cut(s) 591
Sfr274I CTCGAG 1 cut(s) 128
Sfr303I CCGCGG 1 cut(s) 51
SgrBI CCGCGG 1 cut(s) 51
SinI GGWCC 2 cut(s) 144, 561
SlaI CTCGAG 1 cut(s) 128
SmaI CCCGGG 1 cut(s) 104
SmlI CTYRAG 2 cut(s) 128, 230
SmoI CTYRAG 2 cut(s) 128, 230
SphI GCATGC 2 cut(s) 82, 200
SrfI GCCCGGGC 1 cut(s) 104
Sse9I AATT 9 cut(s) 335, 357, 371, 387, 549, 553, 626, 948, 972
SsiI CCGC 7 cut(s) 14, 48, 50, 56, 76, 82, 440
SspMI CTAG 1 cut(s) 512
SstI GAGCTC 1 cut(s) 129
StyD4I CCNGG 3 cut(s) 101, 102, 493
StyI CCWWGG 1 cut(s) 180
TaaI ACNGT 4 cut(s) 96, 691, 923, 1030
TaiI ACGT 2 cut(s) 252, 784
TaqI TCGA 4 cut(s) 129, 189, 252, 657
TasI AATT 9 cut(s) 335, 357, 371, 387, 549, 553, 626, 948, 972
TatI WGTACW 1 cut(s) 960
TauI GCSGC 3 cut(s) 50, 53, 443
Tru1I TTAA 5 cut(s) 552, 570, 681, 861, 1043
Tru9I TTAA 5 cut(s) 552, 570, 681, 861, 1043
TscAI CASTG 3 cut(s) 45, 157, 1033
TseFI GTSAC 1 cut(s) 1022
TseI GCWGC 5 cut(s) 53, 222, 538, 737, 767
Tsp45I GTSAC 1 cut(s) 1022
TspDTI ATGAA 1 cut(s) 1045
TspGWI ACGGA 1 cut(s) 308
TspMI CCCGGG 1 cut(s) 102
TspRI CASTG 3 cut(s) 45, 157, 1033
VneI GTGCAC 1 cut(s) 783
VpaK11BI GGWCC 2 cut(s) 144, 561
VspI ATTAAT 1 cut(s) 552
XagI CCTNNNNNAGG 1 cut(s) 822
XapI RAATTY 1 cut(s) 371
XceI RCATGY 3 cut(s) 82, 200, 791
XhoI CTCGAG 1 cut(s) 128
XmaI CCCGGG 1 cut(s) 102
XmiI GTMKAC 1 cut(s) 252
XmnI GAANNNNTTC 1 cut(s) 975
XspI CTAG 1 cut(s) 512
Zsp2I ATGCAT 2 cut(s) 198, 295
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.