DAG protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G32580 AT2G35240 |
| fragaria_vesca | FvH4_7g07460 |
| malus_domestica | MD13G1218600.v1.1 MD16G1223900.v1.1 |
| prunus_persica | Prupe.1G045300_v2.0.a1 |
| pyrus_communis | pycom13g19350 pycom17g21670 |
| rosa_chinensis | RchiOBHm_Chr7g0223791 |
| rosa_laevigata | RLG00000001946 |
| rosa_multiflora | Rmu_sc0004540.1_g000007 Rmu_sc0010556.1_g000006 |
| rosa_roxburghii | Rroxscaffold_3G00235330 |
| rosa_rugosa | Rorug07G0219600 |
| rosa_samantha | Rh7AG363100 Rh7BG353900 Rh7CG381500 Rh7DG357900 |
| rosa_wichuraiana | Rw7G030820 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 59 |
| AcsI | RAATTY | 1 cut(s) | 52 |
| AfaI | GTAC | 1 cut(s) | 185 |
| AgsI | TTSAA | 1 cut(s) | 119 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 99, 131 |
| AluBI | AGCT | 1 cut(s) | 167 |
| AluI | AGCT | 1 cut(s) | 167 |
| Alw21I | GWGCWC | 1 cut(s) | 169 |
| AlwI | GGATC | 1 cut(s) | 59 |
| ApoI | RAATTY | 1 cut(s) | 52 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 114 |
| AspLEI | GCGC | 1 cut(s) | 210 |
| AsuC2I | CCSGG | 2 cut(s) | 30, 226 |
| BanII | GRGCYC | 1 cut(s) | 169 |
| Bbv12I | GWGCWC | 1 cut(s) | 169 |
| BceAI | ACGGC | 1 cut(s) | 142 |
| BcnI | CCSGG | 2 cut(s) | 30, 226 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 133 |
| Bme1390I | CCNGG | 2 cut(s) | 30, 226 |
| BmiI | GGNNCC | 1 cut(s) | 150 |
| BmrFI | CCNGG | 2 cut(s) | 30, 226 |
| Bpu10I | CCTNAGC | 1 cut(s) | 168 |
| BpuMI | CCSGG | 2 cut(s) | 30, 226 |
| BsaAI | YACGTR | 1 cut(s) | 205 |
| BsaJI | CCNNGG | 1 cut(s) | 179 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 99, 129 |
| BseDI | CCNNGG | 1 cut(s) | 179 |
| BseMII | CTCAG | 2 cut(s) | 81, 182 |
| BseRI | GAGGAG | 1 cut(s) | 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 169 |
| BsiSI | CCGG | 3 cut(s) | 30, 211, 226 |
| Bsp1286I | GDGCHC | 1 cut(s) | 169 |
| Bsp143I | GATC | 1 cut(s) | 64 |
| BspCNI | CTCAG | 2 cut(s) | 82, 181 |
| BspLI | GGNNCC | 1 cut(s) | 150 |
| BspPI | GGATC | 1 cut(s) | 59 |
| BssECI | CCNNGG | 1 cut(s) | 179 |
| BssMI | GATC | 1 cut(s) | 64 |
| BssT1I | CCWWGG | 1 cut(s) | 179 |
| BstBAI | YACGTR | 1 cut(s) | 205 |
| BstC8I | GCNNGC | 1 cut(s) | 26 |
| BstDEI | CTNAG | 2 cut(s) | 90, 168 |
| BstHHI | GCGC | 1 cut(s) | 210 |
| BstKTI | GATC | 1 cut(s) | 67 |
| BstMBI | GATC | 1 cut(s) | 64 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 133 |
| BstSCI | CCNGG | 2 cut(s) | 28, 224 |
| Cac8I | GCNNGC | 1 cut(s) | 26 |
| CfoI | GCGC | 1 cut(s) | 210 |
| Csp6I | GTAC | 1 cut(s) | 184 |
| CviJI | RGCY | 4 cut(s) | 24, 151, 157, 167 |
| CviKI_1 | RGCY | 4 cut(s) | 24, 151, 157, 167 |
| CviQI | GTAC | 1 cut(s) | 184 |
| DdeI | CTNAG | 2 cut(s) | 90, 168 |
| DpnI | GATC | 1 cut(s) | 66 |
| DpnII | GATC | 1 cut(s) | 64 |
| Ecl136II | GAGCTC | 1 cut(s) | 167 |
| Eco130I | CCWWGG | 1 cut(s) | 179 |
| Eco24I | GRGCYC | 1 cut(s) | 169 |
| Eco53kI | GAGCTC | 1 cut(s) | 167 |
| EcoICRI | GAGCTC | 1 cut(s) | 167 |
| EcoT14I | CCWWGG | 1 cut(s) | 179 |
| EcoT38I | GRGCYC | 1 cut(s) | 169 |
| ErhI | CCWWGG | 1 cut(s) | 179 |
| FaiI | YATR | 2 cut(s) | 60, 84 |
| FriOI | GRGCYC | 1 cut(s) | 169 |
| GlaI | GCGC | 1 cut(s) | 209 |
| HapII | CCGG | 3 cut(s) | 30, 211, 226 |
| HhaI | GCGC | 1 cut(s) | 210 |
| Hin6I | GCGC | 1 cut(s) | 208 |
| HinP1I | GCGC | 1 cut(s) | 208 |
| HinfI | GANTC | 1 cut(s) | 4 |
| HpaII | CCGG | 3 cut(s) | 30, 211, 226 |
| Hpy188III | TCNNGA | 3 cut(s) | 68, 162, 170 |
| HpyCH4IV | ACGT | 1 cut(s) | 204 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 133 |
| HpyF3I | CTNAG | 2 cut(s) | 90, 168 |
| HpySE526I | ACGT | 1 cut(s) | 204 |
| HspAI | GCGC | 1 cut(s) | 208 |
| Kzo9I | GATC | 1 cut(s) | 64 |
| LmnI | GCTCC | 1 cut(s) | 148 |
| LpnPI | CCDG | 6 cut(s) | 6, 43, 81, 141, 155, 224 |
| MaeII | ACGT | 1 cut(s) | 204 |
| MaeIII | GTNAC | 1 cut(s) | 200 |
| MalI | GATC | 1 cut(s) | 66 |
| MboI | GATC | 1 cut(s) | 64 |
| MboII | GAAGA | 1 cut(s) | 38 |
| MhlI | GDGCHC | 1 cut(s) | 169 |
| MluCI | AATT | 2 cut(s) | 52, 111 |
| MnlI | CCTC | 3 cut(s) | 132, 135, 207 |
| MroXI | GAANNNNTTC | 1 cut(s) | 114 |
| MspI | CCGG | 3 cut(s) | 30, 211, 226 |
| MspR9I | CCNGG | 2 cut(s) | 30, 226 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 133 |
| NciI | CCSGG | 2 cut(s) | 30, 226 |
| NdeII | GATC | 1 cut(s) | 64 |
| NlaIV | GGNNCC | 1 cut(s) | 150 |
| PdmI | GAANNNNTTC | 1 cut(s) | 114 |
| PfeI | GAWTC | 1 cut(s) | 4 |
| Ppu21I | YACGTR | 1 cut(s) | 205 |
| Psp124BI | GAGCTC | 1 cut(s) | 169 |
| PspN4I | GGNNCC | 1 cut(s) | 150 |
| RsaI | GTAC | 1 cut(s) | 185 |
| RsaNI | GTAC | 1 cut(s) | 184 |
| SacI | GAGCTC | 1 cut(s) | 169 |
| Sau3AI | GATC | 1 cut(s) | 64 |
| ScrFI | CCNGG | 2 cut(s) | 30, 226 |
| SduI | GDGCHC | 1 cut(s) | 169 |
| SetI | ASST | 4 cut(s) | 125, 169, 185, 207 |
| Sse9I | AATT | 2 cut(s) | 52, 111 |
| SstI | GAGCTC | 1 cut(s) | 169 |
| StyD4I | CCNGG | 2 cut(s) | 28, 224 |
| StyI | CCWWGG | 1 cut(s) | 179 |
| TaiI | ACGT | 1 cut(s) | 207 |
| TasI | AATT | 2 cut(s) | 52, 111 |
| TfiI | GAWTC | 1 cut(s) | 4 |
| XapI | RAATTY | 1 cut(s) | 52 |
| XmnI | GAANNNNTTC | 1 cut(s) | 114 |