Nuclear transcription factor Y subunit
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g11310 |
| malus_domestica | MD17G1250700.v1.1 |
| prunus_persica | Prupe.3G149300_v2.0.a1 |
| pyrus_communis | pycom09g17270 pycom14g13000 pycom17g25460 |
| rosa_chinensis | RchiOBHm_Chr4g0407551 |
| rosa_laevigata | RLG00000008711 |
| rosa_roxburghii | Rroxscaffold_5G00352170 |
| rosa_rugosa | Rorug04G0080300 |
| rosa_samantha | Rh4AG145000 Rh4BG142900 Rh4CG151700 Rh4DG138900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AcsI | RAATTY | 1 cut(s) | 245 |
| AcuI | CTGAAG | 1 cut(s) | 392 |
| AfaI | GTAC | 1 cut(s) | 403 |
| AgsI | TTSAA | 2 cut(s) | 10, 215 |
| AjnI | CCWGG | 1 cut(s) | 425 |
| AluBI | AGCT | 3 cut(s) | 306, 343, 358 |
| AluI | AGCT | 3 cut(s) | 306, 343, 358 |
| Alw21I | GWGCWC | 2 cut(s) | 44, 360 |
| Alw26I | GTCTC | 1 cut(s) | 305 |
| ApoI | RAATTY | 1 cut(s) | 245 |
| BanII | GRGCYC | 1 cut(s) | 360 |
| Bbv12I | GWGCWC | 2 cut(s) | 44, 360 |
| BccI | CCATC | 3 cut(s) | 246, 278, 326 |
| BciT130I | CCWGG | 1 cut(s) | 427 |
| BclI | TGATCA | 1 cut(s) | 442 |
| BcoDI | GTCTC | 1 cut(s) | 305 |
| BfaI | CTAG | 1 cut(s) | 150 |
| BfmI | CTRYAG | 1 cut(s) | 164 |
| BglII | AGATCT | 1 cut(s) | 181 |
| Bme1390I | CCNGG | 1 cut(s) | 427 |
| BmrFI | CCNGG | 1 cut(s) | 427 |
| BsaJI | CCNNGG | 1 cut(s) | 426 |
| Bse1I | ACTGG | 1 cut(s) | 224 |
| BseBI | CCWGG | 1 cut(s) | 427 |
| BseDI | CCNNGG | 1 cut(s) | 426 |
| BseNI | ACTGG | 1 cut(s) | 224 |
| BseRI | GAGGAG | 1 cut(s) | 137 |
| BsiHKAI | GWGCWC | 2 cut(s) | 44, 360 |
| BsiWI | CGTACG | 1 cut(s) | 401 |
| BsmAI | GTCTC | 1 cut(s) | 305 |
| Bsp1286I | GDGCHC | 2 cut(s) | 44, 360 |
| Bsp143I | GATC | 2 cut(s) | 181, 442 |
| BspMAI | CTGCAG | 1 cut(s) | 168 |
| BsrI | ACTGG | 1 cut(s) | 224 |
| BssECI | CCNNGG | 1 cut(s) | 426 |
| BssMI | GATC | 2 cut(s) | 181, 442 |
| Bst2UI | CCWGG | 1 cut(s) | 427 |
| Bst4CI | ACNGT | 1 cut(s) | 201 |
| BstKTI | GATC | 2 cut(s) | 184, 445 |
| BstMAI | GTCTC | 1 cut(s) | 305 |
| BstMBI | GATC | 2 cut(s) | 181, 442 |
| BstNI | CCWGG | 1 cut(s) | 427 |
| BstNSI | RCATGY | 1 cut(s) | 339 |
| BstSCI | CCNGG | 1 cut(s) | 425 |
| BstSFI | CTRYAG | 1 cut(s) | 164 |
| BstX2I | RGATCY | 1 cut(s) | 181 |
| BstYI | RGATCY | 1 cut(s) | 181 |
| BtsIMutI | CAGTG | 1 cut(s) | 231 |
| Csp6I | GTAC | 1 cut(s) | 402 |
| CviAII | CATG | 4 cut(s) | 85, 336, 352, 372 |
| CviJI | RGCY | 4 cut(s) | 306, 343, 358, 431 |
| CviKI_1 | RGCY | 4 cut(s) | 306, 343, 358, 431 |
| CviQI | GTAC | 1 cut(s) | 402 |
| DpnI | GATC | 2 cut(s) | 183, 444 |
| DpnII | GATC | 2 cut(s) | 181, 442 |
| Ecl136II | GAGCTC | 1 cut(s) | 358 |
| Eco24I | GRGCYC | 1 cut(s) | 360 |
| Eco53kI | GAGCTC | 1 cut(s) | 358 |
| Eco57I | CTGAAG | 1 cut(s) | 392 |
| EcoICRI | GAGCTC | 1 cut(s) | 358 |
| EcoRII | CCWGG | 1 cut(s) | 425 |
| EcoT38I | GRGCYC | 1 cut(s) | 360 |
| FaeI | CATG | 4 cut(s) | 88, 339, 355, 375 |
| FaiI | YATR | 6 cut(s) | 86, 179, 337, 353, 373, 422 |
| FatI | CATG | 4 cut(s) | 84, 335, 351, 371 |
| FbaI | TGATCA | 1 cut(s) | 442 |
| FriOI | GRGCYC | 1 cut(s) | 360 |
| FspBI | CTAG | 1 cut(s) | 150 |
| Hin1II | CATG | 4 cut(s) | 88, 339, 355, 375 |
| HinfI | GANTC | 4 cut(s) | 77, 193, 211, 313 |
| Hpy188I | TCNGA | 4 cut(s) | 283, 310, 438, 485 |
| Hpy188III | TCNNGA | 3 cut(s) | 208, 242, 452 |
| HpyAV | CCTTC | 1 cut(s) | 163 |
| HpyCH4III | ACNGT | 1 cut(s) | 201 |
| HpyCH4V | TGCA | 4 cut(s) | 166, 257, 379, 473 |
| Hsp92II | CATG | 4 cut(s) | 88, 339, 355, 375 |
| Ksp22I | TGATCA | 1 cut(s) | 442 |
| Kzo9I | GATC | 2 cut(s) | 181, 442 |
| LmnI | GCTCC | 1 cut(s) | 355 |
| LpnPI | CCDG | 3 cut(s) | 237, 412, 439 |
| MaeI | CTAG | 1 cut(s) | 150 |
| MaeIII | GTNAC | 1 cut(s) | 416 |
| MalI | GATC | 2 cut(s) | 183, 444 |
| MboI | GATC | 2 cut(s) | 181, 442 |
| MboII | GAAGA | 5 cut(s) | 24, 27, 39, 140, 398 |
| MflI | RGATCY | 1 cut(s) | 181 |
| MhlI | GDGCHC | 2 cut(s) | 44, 360 |
| MluCI | AATT | 2 cut(s) | 22, 245 |
| MlyI | GAGTC | 1 cut(s) | 307 |
| MnlI | CCTC | 7 cut(s) | 114, 115, 118, 130, 222, 261, 390 |
| MseI | TTAA | 1 cut(s) | 294 |
| MspR9I | CCNGG | 1 cut(s) | 427 |
| MvaI | CCWGG | 1 cut(s) | 427 |
| NdeII | GATC | 2 cut(s) | 181, 442 |
| NlaIII | CATG | 4 cut(s) | 88, 339, 355, 375 |
| NmuCI | GTSAC | 1 cut(s) | 416 |
| NspI | RCATGY | 1 cut(s) | 339 |
| PfeI | GAWTC | 3 cut(s) | 77, 193, 211 |
| Pfl23II | CGTACG | 1 cut(s) | 401 |
| PleI | GAGTC | 1 cut(s) | 307 |
| PpsI | GAGTC | 1 cut(s) | 307 |
| Psp124BI | GAGCTC | 1 cut(s) | 360 |
| Psp6I | CCWGG | 1 cut(s) | 425 |
| PspGI | CCWGG | 1 cut(s) | 425 |
| PspLI | CGTACG | 1 cut(s) | 401 |
| PstI | CTGCAG | 1 cut(s) | 168 |
| PsuI | RGATCY | 1 cut(s) | 181 |
| RsaI | GTAC | 1 cut(s) | 403 |
| RsaNI | GTAC | 1 cut(s) | 402 |
| SacI | GAGCTC | 1 cut(s) | 360 |
| SaqAI | TTAA | 1 cut(s) | 294 |
| Sau3AI | GATC | 2 cut(s) | 181, 442 |
| SchI | GAGTC | 1 cut(s) | 307 |
| ScrFI | CCNGG | 1 cut(s) | 427 |
| SduI | GDGCHC | 2 cut(s) | 44, 360 |
| SetI | ASST | 3 cut(s) | 308, 345, 360 |
| SfcI | CTRYAG | 1 cut(s) | 164 |
| Sse9I | AATT | 2 cut(s) | 22, 245 |
| SspMI | CTAG | 1 cut(s) | 150 |
| SstI | GAGCTC | 1 cut(s) | 360 |
| StyD4I | CCNGG | 1 cut(s) | 425 |
| TaaI | ACNGT | 1 cut(s) | 201 |
| TaqI | TCGA | 3 cut(s) | 38, 57, 207 |
| TasI | AATT | 2 cut(s) | 22, 245 |
| TfiI | GAWTC | 3 cut(s) | 77, 193, 211 |
| Tru1I | TTAA | 1 cut(s) | 294 |
| Tru9I | TTAA | 1 cut(s) | 294 |
| TscAI | CASTG | 1 cut(s) | 231 |
| TseFI | GTSAC | 1 cut(s) | 416 |
| Tsp45I | GTSAC | 1 cut(s) | 416 |
| TspDTI | ATGAA | 5 cut(s) | 55, 73, 290, 337, 360 |
| TspRI | CASTG | 1 cut(s) | 231 |
| XapI | RAATTY | 1 cut(s) | 245 |
| XceI | RCATGY | 1 cut(s) | 339 |
| XspI | CTAG | 1 cut(s) | 150 |