Histone-like transcription factor (CBF/NF-Y) and archaeal histone
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g11310 |
| malus_domestica | MD17G1250700.v1.1 |
| prunus_persica | Prupe.3G149300_v2.0.a1 |
| pyrus_communis | pycom09g17270 pycom14g13000 pycom17g25460 |
| rosa_chinensis | RchiOBHm_Chr4g0407551 |
| rosa_laevigata | RLG00000008711 |
| rosa_roxburghii | Rroxscaffold_5G00352170 |
| rosa_rugosa | Rorug04G0080300 |
| rosa_samantha | Rh4AG145000 Rh4BG142900 Rh4CG151700 Rh4DG138900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 147 |
| Acc36I | ACCTGC | 4 cut(s) | 584, 2164, 3010, 3334 |
| AccB1I | GGYRCC | 2 cut(s) | 458, 3277 |
| AccBSI | CCGCTC | 1 cut(s) | 1227 |
| AccII | CGCG | 1 cut(s) | 3743 |
| AccIII | TCCGGA | 1 cut(s) | 262 |
| AciI | CCGC | 6 cut(s) | 486, 590, 1225, 2072, 2331, 3445 |
| AclWI | GGATC | 9 cut(s) | 1061, 1074, 1592, 1760, 1877, 2584, 2611, 2780, 3458 |
| AcoI | YGGCCR | 3 cut(s) | 159, 712, 1762 |
| AcsI | RAATTY | 8 cut(s) | 1294, 1368, 1384, 1436, 1489, 2582, 3205, 3478 |
| AcuI | CTGAAG | 8 cut(s) | 492, 759, 2070, 2274, 2384, 2841, 3107, 3747 |
| AfaI | GTAC | 6 cut(s) | 229, 284, 3109, 3189, 3412, 3472 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 197, 995, 1287, 1924, 2120, 3071, 3616 |
| AflIII | ACRYGT | 1 cut(s) | 277 |
| AhlI | ACTAGT | 1 cut(s) | 3875 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 891, 923, 2286, 2318 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 2024, 2056, 3216, 3248 |
| Alw21I | GWGCWC | 5 cut(s) | 260, 879, 2365, 3020, 3082 |
| Alw26I | GTCTC | 2 cut(s) | 527, 701 |
| AlwI | GGATC | 9 cut(s) | 1061, 1074, 1592, 1760, 1877, 2584, 2611, 2780, 3458 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1325, 3596 |
| Ama87I | CYCGRG | 1 cut(s) | 185 |
| Aor13HI | TCCGGA | 1 cut(s) | 262 |
| ApeKI | GCWGC | 9 cut(s) | 209, 488, 734, 2007, 2195, 2480, 2960, 3266, 3340 |
| ApoI | RAATTY | 8 cut(s) | 1294, 1368, 1384, 1436, 1489, 2582, 3205, 3478 |
| AseI | ATTAAT | 2 cut(s) | 623, 1269 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 906, 1543, 3321 |
| AspLEI | GCGC | 1 cut(s) | 148 |
| AspS9I | GGNCC | 8 cut(s) | 118, 268, 1561, 1732, 2074, 2309, 2999, 3361 |
| AsuC2I | CCSGG | 1 cut(s) | 3365 |
| AsuHPI | GGTGA | 8 cut(s) | 1270, 1718, 1866, 2502, 3279, 3625, 3695, 3707 |
| AsuNHI | GCTAGC | 1 cut(s) | 2963 |
| AvaI | CYCGRG | 1 cut(s) | 185 |
| AvaII | GGWCC | 4 cut(s) | 118, 268, 1561, 2999 |
| BaeGI | GKGCMC | 2 cut(s) | 463, 3280 |
| BalI | TGGCCA | 3 cut(s) | 161, 714, 1764 |
| BamHI | GGATCC | 1 cut(s) | 1066 |
| BanI | GGYRCC | 2 cut(s) | 458, 3277 |
| BanII | GRGCYC | 1 cut(s) | 2657 |
| BauI | CACGAG | 3 cut(s) | 579, 2358, 2364 |
| BbsI | GAAGAC | 3 cut(s) | 146, 1521, 2058 |
| Bbv12I | GWGCWC | 5 cut(s) | 260, 879, 2365, 3020, 3082 |
| BbvI | GCAGC | 9 cut(s) | 221, 475, 746, 2019, 2182, 2467, 2947, 3253, 3352 |
| BceAI | ACGGC | 1 cut(s) | 3656 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 1871, 1905, 2000, 2034, 2538, 2572 |
| BclI | TGATCA | 1 cut(s) | 607 |
| BcnI | CCSGG | 1 cut(s) | 3365 |
| BcoDI | GTCTC | 2 cut(s) | 527, 701 |
| BcuI | ACTAGT | 1 cut(s) | 3875 |
| BfmI | CTRYAG | 6 cut(s) | 360, 585, 852, 1358, 1428, 1807 |
| BfuAI | ACCTGC | 4 cut(s) | 584, 2164, 3010, 3334 |
| BmcAI | AGTACT | 2 cut(s) | 229, 3412 |
| Bme18I | GGWCC | 4 cut(s) | 118, 268, 1561, 2999 |
| BmeT110I | CYCGRG | 1 cut(s) | 185 |
| BmgT120I | GGNCC | 8 cut(s) | 118, 268, 1561, 1732, 2074, 2309, 2999, 3361 |
| BmiI | GGNNCC | 9 cut(s) | 120, 460, 484, 1068, 2310, 2627, 3000, 3279, 3363 |
| BmsI | GCATC | 8 cut(s) | 196, 788, 1495, 2505, 2651, 2823, 2909, 3150 |
| BmtI | GCTAGC | 1 cut(s) | 2967 |
| BpiI | GAAGAC | 3 cut(s) | 146, 1521, 2058 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 488, 520 |
| BpmI | CTGGAG | 5 cut(s) | 551, 942, 1394, 3093, 3219 |
| BpuEI | CTTGAG | 1 cut(s) | 3185 |
| BpuMI | CCSGG | 1 cut(s) | 3365 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1353, 2608, 3132 |
| BsaWI | WCCGGW | 2 cut(s) | 262, 2771 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 197, 995, 1287, 1924, 2120, 3071, 3616 |
| Bse118I | RCCGGY | 2 cut(s) | 2489, 2730 |
| Bse3DI | GCAATG | 6 cut(s) | 750, 965, 1531, 2263, 2513, 2744 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1353, 2608, 3132 |
| BseAI | TCCGGA | 1 cut(s) | 262 |
| BseGI | GGATG | 6 cut(s) | 1123, 1369, 1600, 1877, 2496, 2990 |
| BseJI | GATNNNNATC | 3 cut(s) | 1353, 2608, 3132 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 197, 995, 1287, 1924, 2120, 3071, 3616 |
| BseMI | GCAATG | 6 cut(s) | 750, 965, 1531, 2263, 2513, 2744 |
| BseRI | GAGGAG | 3 cut(s) | 329, 512, 2604 |
| BseSI | GKGCMC | 2 cut(s) | 463, 3280 |
| BseXI | GCAGC | 9 cut(s) | 221, 475, 746, 2019, 2182, 2467, 2947, 3253, 3352 |
| BseYI | CCCAGC | 1 cut(s) | 2115 |
| BsgI | GTGCAG | 2 cut(s) | 474, 2145 |
| Bsh1236I | CGCG | 1 cut(s) | 3743 |
| BshNI | GGYRCC | 2 cut(s) | 458, 3277 |
| BsiHKAI | GWGCWC | 5 cut(s) | 260, 879, 2365, 3020, 3082 |
| BsiHKCI | CYCGRG | 1 cut(s) | 185 |
| BsiSI | CCGG | 6 cut(s) | 191, 263, 2490, 2731, 2772, 3365 |
| BslFI | GGGAC | 5 cut(s) | 1110, 1481, 3012, 3237, 3841 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 197, 995, 1287, 1924, 2120, 3071, 3616 |
| BsmAI | GTCTC | 2 cut(s) | 527, 701 |
| BsmFI | GGGAC | 5 cut(s) | 1110, 1481, 3012, 3237, 3841 |
| BsmI | GAATGC | 3 cut(s) | 644, 781, 1108 |
| BsoBI | CYCGRG | 1 cut(s) | 185 |
| Bsp1286I | GDGCHC | 8 cut(s) | 260, 463, 879, 2365, 2657, 3020, 3082, 3280 |
| Bsp13I | TCCGGA | 1 cut(s) | 262 |
| Bsp1407I | TGTACA | 2 cut(s) | 282, 3187 |
| Bsp19I | CCATGG | 2 cut(s) | 1113, 3519 |
| BspACI | CCGC | 6 cut(s) | 486, 590, 1225, 2072, 2331, 3445 |
| BspEI | TCCGGA | 1 cut(s) | 262 |
| BspFNI | CGCG | 1 cut(s) | 3743 |
| BspHI | TCATGA | 3 cut(s) | 340, 3325, 3355 |
| BspLI | GGNNCC | 9 cut(s) | 120, 460, 484, 1068, 2310, 2627, 3000, 3279, 3363 |
| BspMAI | CTGCAG | 2 cut(s) | 856, 1362 |
| BspMI | ACCTGC | 4 cut(s) | 584, 2164, 3010, 3334 |
| BspOI | GCTAGC | 1 cut(s) | 2967 |
| BspPI | GGATC | 9 cut(s) | 1061, 1074, 1592, 1760, 1877, 2584, 2611, 2780, 3458 |
| BspT107I | GGYRCC | 2 cut(s) | 458, 3277 |
| BsrBI | CCGCTC | 1 cut(s) | 1227 |
| BsrDI | GCAATG | 6 cut(s) | 750, 965, 1531, 2263, 2513, 2744 |
| BsrFI | RCCGGY | 2 cut(s) | 2489, 2730 |
| BsrGI | TGTACA | 2 cut(s) | 282, 3187 |
| BssAI | RCCGGY | 2 cut(s) | 2489, 2730 |
| BssSI | CACGAG | 3 cut(s) | 579, 2358, 2364 |
| BssT1I | CCWWGG | 7 cut(s) | 162, 870, 1113, 1534, 1588, 2994, 3519 |
| Bst2BI | CACGAG | 3 cut(s) | 579, 2358, 2364 |
| Bst6I | CTCTTC | 3 cut(s) | 423, 2424, 3083 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1000 |
| BstAUI | TGTACA | 2 cut(s) | 282, 3187 |
| BstC8I | GCNNGC | 7 cut(s) | 1001, 1479, 1688, 1911, 2331, 2547, 2965 |
| BstDSI | CCRYGG | 2 cut(s) | 1113, 3519 |
| BstF5I | GGATG | 6 cut(s) | 1123, 1369, 1600, 1877, 2496, 2990 |
| BstFNI | CGCG | 1 cut(s) | 3743 |
| BstHHI | GCGC | 1 cut(s) | 148 |
| BstMAI | GTCTC | 2 cut(s) | 527, 701 |
| BstNSI | RCATGY | 4 cut(s) | 1003, 1690, 3194, 3233 |
| BstSFI | CTRYAG | 6 cut(s) | 360, 585, 852, 1358, 1428, 1807 |
| BstSLI | GKGCMC | 2 cut(s) | 463, 3280 |
| BstUI | CGCG | 1 cut(s) | 3743 |
| BstV1I | GCAGC | 9 cut(s) | 221, 475, 746, 2019, 2182, 2467, 2947, 3253, 3352 |
| BstV2I | GAAGAC | 3 cut(s) | 146, 1521, 2058 |
| BstX2I | RGATCY | 2 cut(s) | 1066, 3463 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2714 |
| BstYI | RGATCY | 2 cut(s) | 1066, 3463 |
| BtgI | CCRYGG | 2 cut(s) | 1113, 3519 |
| BtsCI | GGATG | 6 cut(s) | 1123, 1369, 1600, 1877, 2496, 2990 |
| BtsI | GCAGTG | 1 cut(s) | 208 |
| BtsIMutI | CAGTG | 6 cut(s) | 208, 417, 2874, 3063, 3455, 3750 |
| BveI | ACCTGC | 4 cut(s) | 584, 2164, 3010, 3334 |
| Cac8I | GCNNGC | 7 cut(s) | 1001, 1479, 1688, 1911, 2331, 2547, 2965 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1325, 3596 |
| CciI | TCATGA | 3 cut(s) | 340, 3325, 3355 |
| CfoI | GCGC | 1 cut(s) | 148 |
| Cfr10I | RCCGGY | 2 cut(s) | 2489, 2730 |
| Cfr13I | GGNCC | 8 cut(s) | 118, 268, 1561, 1732, 2074, 2309, 2999, 3361 |
| CseI | GACGC | 1 cut(s) | 1169 |
| CsiI | ACCWGGT | 1 cut(s) | 66 |
| Csp6I | GTAC | 6 cut(s) | 228, 283, 3108, 3188, 3411, 3471 |
| CviQI | GTAC | 6 cut(s) | 228, 283, 3108, 3188, 3411, 3471 |
| DraI | TTTAAA | 2 cut(s) | 2389, 2454 |
| EaeI | YGGCCR | 3 cut(s) | 159, 712, 1762 |
| Eam1104I | CTCTTC | 3 cut(s) | 423, 2424, 3083 |
| EarI | CTCTTC | 3 cut(s) | 423, 2424, 3083 |
| Eco130I | CCWWGG | 7 cut(s) | 162, 870, 1113, 1534, 1588, 2994, 3519 |
| Eco147I | AGGCCT | 1 cut(s) | 1481 |
| Eco24I | GRGCYC | 1 cut(s) | 2657 |
| Eco32I | GATATC | 1 cut(s) | 3792 |
| Eco47I | GGWCC | 4 cut(s) | 118, 268, 1561, 2999 |
| Eco57I | CTGAAG | 8 cut(s) | 492, 759, 2070, 2274, 2384, 2841, 3107, 3747 |
| Eco88I | CYCGRG | 1 cut(s) | 185 |
| EcoO109I | RGGNCCY | 3 cut(s) | 268, 2999, 3361 |
| EcoRI | GAATTC | 3 cut(s) | 1368, 1384, 3478 |
| EcoRV | GATATC | 1 cut(s) | 3792 |
| EcoT14I | CCWWGG | 7 cut(s) | 162, 870, 1113, 1534, 1588, 2994, 3519 |
| EcoT22I | ATGCAT | 1 cut(s) | 781 |
| EcoT38I | GRGCYC | 1 cut(s) | 2657 |
| ErhI | CCWWGG | 7 cut(s) | 162, 870, 1113, 1534, 1588, 2994, 3519 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 501, 533, 854, 886, 2382, 2414 |
| FaqI | GGGAC | 5 cut(s) | 1110, 1481, 3012, 3237, 3841 |
| FauI | CCCGC | 1 cut(s) | 2338 |
| FauNDI | CATATG | 1 cut(s) | 3550 |
| FbaI | TGATCA | 1 cut(s) | 607 |
| FokI | GGATG | 6 cut(s) | 1130, 1376, 1607, 1864, 2483, 2977 |
| FriOI | GRGCYC | 1 cut(s) | 2657 |
| FspI | TGCGCA | 1 cut(s) | 147 |
| GlaI | GCGC | 1 cut(s) | 147 |
| GsaI | CCCAGC | 1 cut(s) | 2119 |
| GsuI | CTGGAG | 5 cut(s) | 551, 942, 1394, 3093, 3219 |
| HapII | CCGG | 6 cut(s) | 191, 263, 2490, 2731, 2772, 3365 |
| HgaI | GACGC | 1 cut(s) | 1169 |
| HhaI | GCGC | 1 cut(s) | 148 |
| Hin6I | GCGC | 1 cut(s) | 146 |
| HinP1I | GCGC | 1 cut(s) | 146 |
| HincII | GTYRAC | 1 cut(s) | 1531 |
| HindII | GTYRAC | 1 cut(s) | 1531 |
| HindIII | AAGCTT | 2 cut(s) | 2383, 2448 |
| HpaII | CCGG | 6 cut(s) | 191, 263, 2490, 2731, 2772, 3365 |
| HphI | GGTGA | 8 cut(s) | 1270, 1718, 1866, 2502, 3279, 3625, 3695, 3707 |
| HpyCH4IV | ACGT | 6 cut(s) | 277, 603, 1777, 1978, 2232, 3688 |
| HpySE526I | ACGT | 6 cut(s) | 277, 603, 1777, 1978, 2232, 3688 |
| HspAI | GCGC | 1 cut(s) | 146 |
| Kpn2I | TCCGGA | 1 cut(s) | 262 |
| Ksp22I | TGATCA | 1 cut(s) | 607 |
| LmnI | GCTCC | 1 cut(s) | 874 |
| Lsp1109I | GCAGC | 9 cut(s) | 221, 475, 746, 2019, 2182, 2467, 2947, 3253, 3352 |
| LweI | GCATC | 8 cut(s) | 196, 788, 1495, 2505, 2651, 2823, 2909, 3150 |
| MabI | ACCWGGT | 1 cut(s) | 66 |
| MaeII | ACGT | 6 cut(s) | 277, 603, 1777, 1978, 2232, 3688 |
| MbiI | CCGCTC | 1 cut(s) | 1227 |
| MflI | RGATCY | 2 cut(s) | 1066, 3463 |
| MhlI | GDGCHC | 8 cut(s) | 260, 463, 879, 2365, 2657, 3020, 3082, 3280 |
| MlsI | TGGCCA | 3 cut(s) | 161, 714, 1764 |
| MluNI | TGGCCA | 3 cut(s) | 161, 714, 1764 |
| MlyI | GAGTC | 8 cut(s) | 17, 203, 1068, 1322, 2027, 2053, 2350, 3569 |
| MmeI | TCCRAC | 7 cut(s) | 61, 96, 1079, 1176, 1588, 2328, 3196 |
| Mox20I | TGGCCA | 3 cut(s) | 161, 714, 1764 |
| Mph1103I | ATGCAT | 1 cut(s) | 781 |
| MroI | TCCGGA | 1 cut(s) | 262 |
| MroXI | GAANNNNTTC | 3 cut(s) | 906, 1543, 3321 |
| MscI | TGGCCA | 3 cut(s) | 161, 714, 1764 |
| MslI | CAYNNNNRTG | 2 cut(s) | 2184, 3117 |
| Msp20I | TGGCCA | 3 cut(s) | 161, 714, 1764 |
| MspA1I | CMGCKG | 2 cut(s) | 488, 737 |
| MspI | CCGG | 6 cut(s) | 191, 263, 2490, 2731, 2772, 3365 |
| Mva1269I | GAATGC | 3 cut(s) | 644, 781, 1108 |
| MvnI | CGCG | 1 cut(s) | 3743 |
| NciI | CCSGG | 1 cut(s) | 3365 |
| NcoI | CCATGG | 2 cut(s) | 1113, 3519 |
| NdeI | CATATG | 1 cut(s) | 3550 |
| NheI | GCTAGC | 1 cut(s) | 2963 |
| NlaIV | GGNNCC | 9 cut(s) | 120, 460, 484, 1068, 2310, 2627, 3000, 3279, 3363 |
| NmeAIII | GCCGAG | 1 cut(s) | 2690 |
| NmuCI | GTSAC | 6 cut(s) | 62, 1661, 1742, 1986, 2228, 2508 |
| NsbI | TGCGCA | 1 cut(s) | 147 |
| NsiI | ATGCAT | 1 cut(s) | 781 |
| NspI | RCATGY | 4 cut(s) | 1003, 1690, 3194, 3233 |
| PaeI | GCATGC | 2 cut(s) | 1003, 1690 |
| PaeR7I | CTCGAG | 1 cut(s) | 185 |
| PagI | TCATGA | 3 cut(s) | 340, 3325, 3355 |
| PceI | AGGCCT | 1 cut(s) | 1481 |
| PctI | GAATGC | 3 cut(s) | 644, 781, 1108 |
| PdmI | GAANNNNTTC | 3 cut(s) | 906, 1543, 3321 |
| PfoI | TCCNGGA | 1 cut(s) | 270 |
| PleI | GAGTC | 8 cut(s) | 17, 202, 1068, 1322, 2027, 2053, 2349, 3568 |
| PpsI | GAGTC | 8 cut(s) | 17, 202, 1068, 1322, 2027, 2053, 2349, 3568 |
| PpuMI | RGGWCCY | 2 cut(s) | 268, 2999 |
| PshBI | ATTAAT | 2 cut(s) | 623, 1269 |
| Psp5II | RGGWCCY | 2 cut(s) | 268, 2999 |
| PspFI | CCCAGC | 1 cut(s) | 2115 |
| PspN4I | GGNNCC | 9 cut(s) | 120, 460, 484, 1068, 2310, 2627, 3000, 3279, 3363 |
| PspPI | GGNCC | 8 cut(s) | 118, 268, 1561, 1732, 2074, 2309, 2999, 3361 |
| PspPPI | RGGWCCY | 2 cut(s) | 268, 2999 |
| PstI | CTGCAG | 2 cut(s) | 856, 1362 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1325, 3596 |
| PsuI | RGATCY | 2 cut(s) | 1066, 3463 |
| PvuII | CAGCTG | 1 cut(s) | 737 |
| RsaI | GTAC | 6 cut(s) | 229, 284, 3109, 3189, 3412, 3472 |
| RsaNI | GTAC | 6 cut(s) | 228, 283, 3108, 3188, 3411, 3471 |
| RseI | CAYNNNNRTG | 2 cut(s) | 2184, 3117 |
| Sau96I | GGNCC | 8 cut(s) | 118, 268, 1561, 1732, 2074, 2309, 2999, 3361 |
| ScaI | AGTACT | 2 cut(s) | 229, 3412 |
| SchI | GAGTC | 8 cut(s) | 17, 203, 1068, 1322, 2027, 2053, 2350, 3569 |
| SduI | GDGCHC | 8 cut(s) | 260, 463, 879, 2365, 2657, 3020, 3082, 3280 |
| SexAI | ACCWGGT | 1 cut(s) | 66 |
| SfaNI | GCATC | 8 cut(s) | 196, 788, 1495, 2505, 2651, 2823, 2909, 3150 |
| SfcI | CTRYAG | 6 cut(s) | 360, 585, 852, 1358, 1428, 1807 |
| Sfr274I | CTCGAG | 1 cut(s) | 185 |
| SinI | GGWCC | 4 cut(s) | 118, 268, 1561, 2999 |
| SlaI | CTCGAG | 1 cut(s) | 185 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 2184, 3117 |
| SmlI | CTYRAG | 2 cut(s) | 185, 3164 |
| SmoI | CTYRAG | 2 cut(s) | 185, 3164 |
| SpeI | ACTAGT | 1 cut(s) | 3875 |
| SphI | GCATGC | 2 cut(s) | 1003, 1690 |
| SseBI | AGGCCT | 1 cut(s) | 1481 |
| SsiI | CCGC | 6 cut(s) | 486, 590, 1225, 2072, 2331, 3445 |
| SspI | AATATT | 2 cut(s) | 905, 1267 |
| StuI | AGGCCT | 1 cut(s) | 1481 |
| StyI | CCWWGG | 7 cut(s) | 162, 870, 1113, 1534, 1588, 2994, 3519 |
| TaiI | ACGT | 6 cut(s) | 280, 606, 1780, 1981, 2235, 3691 |
| TaqI | TCGA | 7 cut(s) | 21, 186, 234, 1166, 1618, 1905, 3309 |
| TatI | WGTACW | 6 cut(s) | 227, 282, 3107, 3187, 3410, 3470 |
| TauI | GCSGC | 4 cut(s) | 593, 1227, 2075, 3448 |
| TscAI | CASTG | 6 cut(s) | 208, 417, 2881, 3063, 3462, 3757 |
| TseFI | GTSAC | 6 cut(s) | 62, 1661, 1742, 1986, 2228, 2508 |
| TseI | GCWGC | 9 cut(s) | 209, 488, 734, 2007, 2195, 2480, 2960, 3266, 3340 |
| Tsp45I | GTSAC | 6 cut(s) | 62, 1661, 1742, 1986, 2228, 2508 |
| TspGWI | ACGGA | 4 cut(s) | 107, 1320, 1962, 2334 |
| TspRI | CASTG | 6 cut(s) | 208, 417, 2881, 3063, 3462, 3757 |
| VpaK11BI | GGWCC | 4 cut(s) | 118, 268, 1561, 2999 |
| VspI | ATTAAT | 2 cut(s) | 623, 1269 |
| XapI | RAATTY | 8 cut(s) | 1294, 1368, 1384, 1436, 1489, 2582, 3205, 3478 |
| XceI | RCATGY | 4 cut(s) | 1003, 1690, 3194, 3233 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2797 |
| XhoI | CTCGAG | 1 cut(s) | 185 |
| XmnI | GAANNNNTTC | 3 cut(s) | 906, 1543, 3321 |
| ZrmI | AGTACT | 2 cut(s) | 229, 3412 |
| Zsp2I | ATGCAT | 1 cut(s) | 781 |