Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00000439

Orthogroup ID

OG0011378

Physical Location & Seq

Genomic Coordinates Reverse (-)

104565 .. 111910

Gene Structure 7346 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom439g00040.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2406 bp

ATGACGTGTTGGCACATAACCACTGGTTCACGACGTGGCATAACCAGCAGTCAGCTAACGTGCACCCATCCTACTTCTCATCCGCCGTTTGTTTCCCGAGAAAATCCCCAAAAAAGAAAATTAAAAAAAAGAAAAACCCGAAAATCACCACACCCCGCTCTCTGTATGGCGGTCCGAGCCTCCGTGTCGCGGTTTCCGATCGACGCCGGGGCCCACGAGAGCTCAGGCATCCCATGGGGCGTTTCGGTGACGCCGTTCGCGACGAAGGACGAGAACGGCCAGTCGCCGGCATACGGATCGAACTGCCAGCTGCTGCCGAGGTGCGAGAACTGCTGGGCGTATTTCAACACGTTCTGCGAGCTGGATCAGTGGTCGTGGAACTGTGCCCTGTGCGGAAACCCTCAGGGGCTTTCGTCTCAGGCCATTGCTCGATACTCGCACCCTCAGTCCTGCCCCGAAATGATGTCCTCGTTCGTAGATCTGGAGCTTCCTGTAGAAGAGTCGGATGAAGTAATGCAACCTCGCCCGGTTTACGTTGCGGTCATTGATTTGTCCTCTTCAGAAGAATTTTTGGAACTTATTAAAAGTGCATTGCTGGCCTCCTTGGAAGCTCTTGGGCCTGGTTCTCTCTTTGGTCTTGCTACTTTTAGCCACAAATTAGGGTTGTATGATGTTCAAGGACCTATACCAGTTGTAAAGAATGTTTTCATTCCACCGGAAACAGACGGTACCCTACCAATTGAGCTTGAAGATGTCATGCCATTGTTACAGTTTTTGGCTCCAGTGGAAACTTGTAAGGACCGTATTGGATCTGCACTTGAAACGCTCAGACCAACAACTTCATGGGAGAGAACTACAGCAGCTGGTCAAGGAATTGATGGTGTTTTGATGGGTGGGCGAGGGTTTGGGGTGGCAATGGAAGCACTTTTGAACTACCTTGGATCTGAGTATGGAAGTACATTTGCATTAGGTAGAGTCTTTGCCTTTTTGTCTGGTCCTCCTGATTATGGAGCTGGGCAACTAGATACAAGACGGTATGGTGAACAATATGCTAGTAAGGGAGAGGATGCGGACCGTGCATTGCTTCCTGAGCAGACACCATTCTACAGAGATCTGGCTGCTGTTGCTGTTCAAGCAGGTGTTTGCGTGGACATTTTTGCTGTTACAAATGAGTATACAGATTTGGCGTCTTTGAAGTTTCTAAGTGTAGACAGTGGAGGCTCATTGTATTTATATTCGAACACTGATGACTCAACTCTTCCTCAGGACATGTACCGAATGCTAAGTCGGCCATATGCTTTTGGTTGTGTACTGCGATTGAGGACCTCATCTGAATTCAAAACTGGCCACTCTTATGGTCATTTCTTTCCGGATCCACAGTATGAGAATGTTCAACACATTATCTGTTGTGATTCTTATGCGACATATGCTTATGACTTTGAGTTTGAAGACACCAAGGGATTTGCAAAACATGGATCAGAGCCTCCTATTATACAGATTGCATTTCAATACACTGTTGTAATGCCTCCTAAGGAGCTCTCCGATTCAACATCCGTGTCCTCAAGTAGAGGCAAGTATTCCCTTAAACGACGACTAAGGATCCGAACATTACAATGTGGAGTTGCCCAAAATATGAATGAACTCTACGACAGTGTTGATCCTGAAGTAATCCTGTCACTGCTTGTTCACAAGGTTATACTAGCCTCTTTGGAGCAAGGAGTTCGGGAAGGCAGAATATTGCTTCATGATTGGCTTGTGATCCTAACAGCTCAATACAATGAAGCGTATAAACTAATTCAATACAATAATGGAAGTGCAGGAACTGCTCAGATTGATGTTGCATTCACACAATGTCCAGAACTGCAGTCTTTGCCCCGCTTGGTTTTTGCATTGCTTCGAAATCCTCTGCTCCGTTTTCATGAAGAAGGTGTTCATCCGGACTACCGAATCTACCTGCAGTGCCTTTTCAGTGCACTGGAACCAAGTTCACTTCATCGTGCCGTGTATCCAGTGCTGACCTCCTATTCTACTCCGGACAAACAAGCATACCCACGCCATTCACTGAGTCGTGCAGCACTGATTACCAGTGGTAGTCCTATATTTTTCCTTGATGCATTTACGGCTCTGATTGTGTTCTATTCCTCAACGGCAGACCCTTCACTTCCTTTTCCTCCACCTCATGATTGTTTGTTGCGGACTGTGATCAACAATTTGAAGGAAGAGAGATGCATCACCCCCAAACTGCTATTTATAAGAGGAGGGCAGGACGATGCCACACCTTTCGAGAATTATCTTATCGAGGAACAGGACGTTGATGGAAGCGGTATAACGAGCGTTATGGGTTTTGTTTCCTTTCTGGAGGATGTTACGCAGAGTGTGCTAGAATACATGAAGTCTGGTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

802

Amino Acids

88.81

Weight (kDa)

5.3

Isoelectric Point (pI)

46.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0011378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27460
fragaria_vesca	FvH4_3g24980
malus_domestica	MD03G1145900.v1.1 MD11G1164800.v1.1
prunus_persica	Prupe.6G130700_v2.0.a1 Prupe.6G130700_v2.0.a1
pyrus_communis	pycom03g10000 pycom439g00040
rosa_chinensis	RchiOBHm_Chr5g0040981 RchiOBHm_Chr5g0044841 RchiOBHm_Chr5g0045601
rosa_laevigata	RLG00000034301
rosa_multiflora	Rmu_sc0004567.1_g000018
rosa_roxburghii	Rroxscaffold_1G00034820 Rroxscaffold_1G00036200
rosa_rugosa	Rorug05G0219300
rosa_samantha	Rh5AG301100 Rh5CG335200 Rh5DG318500
rosa_wichuraiana	Rw5G027910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2252
AarI	CACCTGC	1 cut(s)	1127
Acc36I	ACCTGC	2 cut(s)	1127, 1962
Acc65I	GGTACC	1 cut(s)	728
AccB1I	GGYRCC	1 cut(s)	728
AccBSI	CCGCTC	1 cut(s)	158
AccI	GTMKAC	2 cut(s)	1175, 1209
AccII	CGCG	2 cut(s)	190, 260
AccIII	TCCGGA	3 cut(s)	1369, 1936, 2032
AcoI	YGGCCR	3 cut(s)	277, 1289, 1345
AcsI	RAATTY	2 cut(s)	566, 1334
AcuI	CTGAAG	2 cut(s)	543, 1683
AcyI	GRCGYC	3 cut(s)	204, 251, 1187
AdeI	CACNNNGTG	1 cut(s)	35
AfaI	GTAC	4 cut(s)	730, 958, 1274, 1311
AfiI	CCNNNNNNNGG	4 cut(s)	189, 286, 293, 1007
AflIII	ACRYGT	3 cut(s)	5, 348, 1269
AjiI	CACGTC	2 cut(s)	6, 35
AjnI	CCWGG	1 cut(s)	619
Alw21I	GWGCWC	4 cut(s)	65, 224, 1539, 1975
Alw26I	GTCTC	1 cut(s)	420
Alw44I	GTGCAC	2 cut(s)	61, 1971
AlwNI	CAGNNNCTG	3 cut(s)	313, 863, 1823
Ama87I	CYCGRG	1 cut(s)	96
Aor13HI	TCCGGA	3 cut(s)	1369, 1936, 2032
AoxI	GGCC	7 cut(s)	210, 277, 420, 597, 617, 1289, 1345
ApaI	GGGCCC	1 cut(s)	214
ApaLI	GTGCAC	2 cut(s)	61, 1971
ApeKI	GCWGC	5 cut(s)	310, 313, 860, 1118, 2072
ApoI	RAATTY	2 cut(s)	566, 1334
ArsI	GACNNNNNNTTYG	4 cut(s)	1270, 1302, 1427, 1459
Asp700I	GAANNNNTTC	2 cut(s)	704, 1929
Asp718I	GGTACC	1 cut(s)	728
AspS9I	GGNCC	9 cut(s)	172, 210, 211, 617, 680, 799, 995, 1072, 1323
AsuC2I	CCSGG	2 cut(s)	208, 527
AsuHPI	GGTGA	4 cut(s)	138, 259, 1052, 2224
AsuII	TTCGAA	2 cut(s)	1238, 1897
AvaI	CYCGRG	1 cut(s)	96
AvaII	GGWCC	6 cut(s)	172, 680, 799, 995, 1072, 1323
AxyI	CCTNAGG	3 cut(s)	402, 1263, 1530
BaeGI	GKGCMC	4 cut(s)	65, 214, 388, 1975
BalI	TGGCCA	1 cut(s)	1347
BamHI	GGATCC	2 cut(s)	1372, 1599
BanI	GGYRCC	1 cut(s)	728
BanII	GRGCYC	3 cut(s)	214, 224, 1539
BauI	CACGAG	1 cut(s)	215
BbsI	GAAGAC	1 cut(s)	1455
Bbv12I	GWGCWC	4 cut(s)	65, 224, 1539, 1975
BbvI	GCAGC	5 cut(s)	297, 300, 872, 1105, 2084
BccI	CCATC	4 cut(s)	75, 872, 883, 2309
BceAI	ACGGC	6 cut(s)	70, 238, 292, 1985, 2136, 2163
BcgI	CGANNNNNNTGC	4 cut(s)	279, 313, 1703, 1737
BciT130I	CCWGG	1 cut(s)	621
BciVI	GTATCC	1 cut(s)	2016
BclI	TGATCA	1 cut(s)	2202
BcnI	CCSGG	2 cut(s)	208, 527
BcoDI	GTCTC	1 cut(s)	420
BfaI	CTAG	4 cut(s)	1022, 1053, 1700, 2381
BfmI	CTRYAG	5 cut(s)	492, 855, 1105, 1862, 1955
BfuAI	ACCTGC	2 cut(s)	1127, 1962
BfuI	GTATCC	1 cut(s)	2016
BglII	AGATCT	2 cut(s)	478, 1111
BisI	GCNGC	5 cut(s)	311, 314, 861, 1119, 2073
BlsI	GCNGC	5 cut(s)	312, 315, 862, 1120, 2074
Bme1390I	CCNGG	3 cut(s)	208, 527, 621
Bme18I	GGWCC	6 cut(s)	172, 680, 799, 995, 1072, 1323
BmeT110I	CYCGRG	1 cut(s)	96
BmgBI	CACGTC	2 cut(s)	6, 35
BmgT120I	GGNCC	9 cut(s)	172, 210, 211, 617, 680, 799, 995, 1072, 1323
BmiI	GGNNCC	7 cut(s)	211, 212, 730, 780, 1374, 1601, 1980
BmrFI	CCNGG	3 cut(s)	208, 527, 621
BmsI	GCATC	6 cut(s)	237, 1057, 2101, 2216, 2238, 2260
BpiI	GAAGAC	1 cut(s)	1455
BpmI	CTGGAG	3 cut(s)	503, 765, 2378
Bpu10I	CCTNAGC	2 cut(s)	223, 1089
Bpu14I	TTCGAA	2 cut(s)	1238, 1897
BpuEI	CTTGAG	1 cut(s)	1546
BpuMI	CCSGG	2 cut(s)	208, 527
BsaHI	GRCGYC	3 cut(s)	204, 251, 1187
BsaJI	CCNNGG	6 cut(s)	207, 233, 317, 603, 937, 1455
BsaWI	WCCGGW	4 cut(s)	715, 1369, 1936, 2032
Bsc4I	CCNNNNNNNGG	4 cut(s)	189, 286, 293, 1007
Bse118I	RCCGGY	1 cut(s)	286
Bse1I	ACTGG	8 cut(s)	28, 280, 689, 782, 1348, 1980, 2009, 2085
Bse21I	CCTNAGG	3 cut(s)	402, 1263, 1530
Bse3DI	GCAATG	5 cut(s)	423, 590, 921, 1079, 1889
BseAI	TCCGGA	3 cut(s)	1369, 1936, 2032
BseBI	CCWGG	1 cut(s)	621
BseDI	CCNNGG	6 cut(s)	207, 233, 317, 603, 937, 1455
BseGI	GGATG	8 cut(s)	67, 79, 228, 511, 1072, 1550, 1933, 2368
BseLI	CCNNNNNNNGG	4 cut(s)	189, 286, 293, 1007
BseMI	GCAATG	5 cut(s)	423, 590, 921, 1079, 1889
BseNI	ACTGG	8 cut(s)	28, 280, 689, 782, 1348, 1980, 2009, 2085
BseRI	GAGGAG	1 cut(s)	2271
BseSI	GKGCMC	4 cut(s)	65, 214, 388, 1975
BseXI	GCAGC	5 cut(s)	297, 300, 872, 1105, 2084
BseYI	CCCAGC	2 cut(s)	333, 1013
BsgI	GTGCAG	3 cut(s)	798, 1836, 2091
Bsh1236I	CGCG	2 cut(s)	190, 260
Bsh1285I	CGRYCG	1 cut(s)	201
BshFI	GGCC	7 cut(s)	212, 279, 422, 599, 619, 1291, 1347
BshNI	GGYRCC	1 cut(s)	728
BsiEI	CGRYCG	1 cut(s)	201
BsiHKAI	GWGCWC	4 cut(s)	65, 224, 1539, 1975
BsiHKCI	CYCGRG	1 cut(s)	96
BsiSI	CCGG	7 cut(s)	207, 287, 527, 716, 1370, 1937, 2033
BslI	CCNNNNNNNGG	4 cut(s)	189, 286, 293, 1007
BsmAI	GTCTC	1 cut(s)	420
BsmBI	CGTCTC	1 cut(s)	420
BsmI	GAATGC	2 cut(s)	1284, 1841
BsnI	GGCC	7 cut(s)	212, 279, 422, 599, 619, 1291, 1347
BsoBI	CYCGRG	1 cut(s)	96
Bsp119I	TTCGAA	2 cut(s)	1238, 1897
Bsp120I	GGGCCC	1 cut(s)	210
Bsp1286I	GDGCHC	6 cut(s)	65, 214, 224, 388, 1539, 1975
Bsp13I	TCCGGA	3 cut(s)	1369, 1936, 2032
Bsp19I	CCATGG	1 cut(s)	233
Bsp68I	TCGCGA	1 cut(s)	260
BspANI	GGCC	7 cut(s)	212, 279, 422, 599, 619, 1291, 1347
BspEI	TCCGGA	3 cut(s)	1369, 1936, 2032
BspFNI	CGCG	2 cut(s)	190, 260
BspHI	TCATGA	3 cut(s)	1744, 1918, 2179
BspLI	GGNNCC	7 cut(s)	211, 212, 730, 780, 1374, 1601, 1980
BspMAI	CTGCAG	2 cut(s)	1866, 1959
BspMI	ACCTGC	2 cut(s)	1127, 1962
BspT104I	TTCGAA	2 cut(s)	1238, 1897
BspT107I	GGYRCC	1 cut(s)	728
BsrBI	CCGCTC	1 cut(s)	158
BsrDI	GCAATG	5 cut(s)	423, 590, 921, 1079, 1889
BsrFI	RCCGGY	1 cut(s)	286
BsrI	ACTGG	8 cut(s)	28, 280, 689, 782, 1348, 1980, 2009, 2085
BssAI	RCCGGY	1 cut(s)	286
BssECI	CCNNGG	6 cut(s)	207, 233, 317, 603, 937, 1455
BssNAI	GTATAC	1 cut(s)	1176
BssNI	GRCGYC	3 cut(s)	204, 251, 1187
BssSI	CACGAG	1 cut(s)	215
BssT1I	CCWWGG	4 cut(s)	233, 603, 937, 1455
Bst1107I	GTATAC	1 cut(s)	1176
Bst2BI	CACGAG	1 cut(s)	215
Bst2UI	CCWGG	1 cut(s)	621
Bst6I	CTCTTC	4 cut(s)	492, 562, 1263, 2214
BstACI	GRCGYC	3 cut(s)	204, 251, 1187
BstAPI	GCANNNNNTGC	3 cut(s)	1823, 1870, 2377
BstBI	TTCGAA	2 cut(s)	1238, 1897
BstC8I	GCNNGC	4 cut(s)	288, 308, 359, 597
BstDSI	CCRYGG	1 cut(s)	233
BstF5I	GGATG	8 cut(s)	67, 79, 228, 511, 1072, 1550, 1933, 2368
BstFNI	CGCG	2 cut(s)	190, 260
BstMAI	GTCTC	1 cut(s)	420
BstMCI	CGRYCG	1 cut(s)	201
BstNI	CCWGG	1 cut(s)	621
BstNSI	RCATGY	1 cut(s)	1273
BstSCI	CCNGG	3 cut(s)	206, 525, 619
BstSFI	CTRYAG	5 cut(s)	492, 855, 1105, 1862, 1955
BstSLI	GKGCMC	4 cut(s)	65, 214, 388, 1975
BstUI	CGCG	2 cut(s)	190, 260
BstV1I	GCAGC	5 cut(s)	297, 300, 872, 1105, 2084
BstV2I	GAAGAC	1 cut(s)	1455
BstX2I	RGATCY	6 cut(s)	478, 809, 941, 1111, 1372, 1599
BstXI	CCANNNNNNTGG	1 cut(s)	1355
BstYI	RGATCY	6 cut(s)	478, 809, 941, 1111, 1372, 1599
BstZ17I	GTATAC	1 cut(s)	1176
Bsu36I	CCTNAGG	3 cut(s)	402, 1263, 1530
BsuI	GTATCC	1 cut(s)	2016
BsuRI	GGCC	7 cut(s)	212, 279, 422, 599, 619, 1291, 1347
BtgI	CCRYGG	1 cut(s)	233
BtrI	CACGTC	2 cut(s)	6, 35
BtsCI	GGATG	8 cut(s)	67, 79, 228, 511, 1072, 1550, 1933, 2368
BtsI	GCAGTG	2 cut(s)	1676, 1964
BtuMI	TCGCGA	1 cut(s)	260
BveI	ACCTGC	2 cut(s)	1127, 1962
Cac8I	GCNNGC	4 cut(s)	288, 308, 359, 597
CaiI	CAGNNNCTG	3 cut(s)	313, 863, 1823
CciI	TCATGA	3 cut(s)	1744, 1918, 2179
Cfr10I	RCCGGY	1 cut(s)	286
Cfr13I	GGNCC	9 cut(s)	172, 210, 211, 617, 680, 799, 995, 1072, 1323
CpoI	CGGWCCG	2 cut(s)	172, 1072
CseI	GACGC	3 cut(s)	212, 259, 1176
Csp6I	GTAC	4 cut(s)	729, 957, 1273, 1310
CspI	CGGWCCG	2 cut(s)	172, 1072
CviAII	CATG	9 cut(s)	234, 757, 843, 1270, 1472, 1745, 1919, 2180, 2389
CviQI	GTAC	4 cut(s)	729, 957, 1273, 1310
DraIII	CACNNNGTG	1 cut(s)	35
EaeI	YGGCCR	3 cut(s)	277, 1289, 1345
Eam1104I	CTCTTC	4 cut(s)	492, 562, 1263, 2214
EarI	CTCTTC	4 cut(s)	492, 562, 1263, 2214
EciI	GGCGGA	1 cut(s)	72
Ecl136II	GAGCTC	2 cut(s)	222, 1537
Eco130I	CCWWGG	4 cut(s)	233, 603, 937, 1455
Eco24I	GRGCYC	3 cut(s)	214, 224, 1539
Eco47I	GGWCC	6 cut(s)	172, 680, 799, 995, 1072, 1323
Eco53kI	GAGCTC	2 cut(s)	222, 1537
Eco57I	CTGAAG	2 cut(s)	543, 1683
Eco81I	CCTNAGG	3 cut(s)	402, 1263, 1530
Eco88I	CYCGRG	1 cut(s)	96
EcoICRI	GAGCTC	2 cut(s)	222, 1537
EcoO109I	RGGNCCY	3 cut(s)	210, 680, 1323
EcoRI	GAATTC	1 cut(s)	1334
EcoRII	CCWGG	1 cut(s)	619
EcoT14I	CCWWGG	4 cut(s)	233, 603, 937, 1455
EcoT22I	ATGCAT	2 cut(s)	2116, 2231
EcoT38I	GRGCYC	3 cut(s)	214, 224, 1539
ErhI	CCWWGG	4 cut(s)	233, 603, 937, 1455
Esp3I	CGTCTC	1 cut(s)	420
FaeI	CATG	9 cut(s)	237, 760, 846, 1273, 1475, 1748, 1922, 2183, 2392
FatI	CATG	9 cut(s)	233, 756, 842, 1269, 1471, 1744, 1918, 2179, 2388
FauI	CCCGC	2 cut(s)	163, 1883
FauNDI	CATATG	2 cut(s)	1294, 1426
FbaI	TGATCA	1 cut(s)	2202
FblI	GTMKAC	2 cut(s)	1175, 1209
Fnu4HI	GCNGC	5 cut(s)	311, 314, 861, 1119, 2073
FokI	GGATG	8 cut(s)	54, 66, 215, 518, 1079, 1537, 1920, 2375
FriOI	GRGCYC	3 cut(s)	214, 224, 1539
Fsp4HI	GCNGC	5 cut(s)	311, 314, 861, 1119, 2073
FspBI	CTAG	4 cut(s)	1022, 1053, 1700, 2381
GluI	GCNGC	5 cut(s)	311, 314, 861, 1119, 2073
GsaI	CCCAGC	2 cut(s)	337, 1017
GsuI	CTGGAG	3 cut(s)	503, 765, 2378
HaeIII	GGCC	7 cut(s)	212, 279, 422, 599, 619, 1291, 1347
HapII	CCGG	7 cut(s)	207, 287, 527, 716, 1370, 1937, 2033
HgaI	GACGC	3 cut(s)	212, 259, 1176
Hin1I	GRCGYC	3 cut(s)	204, 251, 1187
Hin1II	CATG	9 cut(s)	237, 760, 846, 1273, 1475, 1748, 1922, 2183, 2392
HinfI	GANTC	7 cut(s)	500, 975, 1250, 1412, 1544, 1947, 2065
HpaII	CCGG	7 cut(s)	207, 287, 527, 716, 1370, 1937, 2033
HphI	GGTGA	4 cut(s)	138, 259, 1052, 2224
Hpy99I	CGWCG	4 cut(s)	36, 206, 265, 1593
HpyAV	CCTTC	5 cut(s)	259, 1721, 1919, 2166, 2209
HpyCH4IV	ACGT	6 cut(s)	5, 34, 59, 350, 534, 2310
HpySE526I	ACGT	6 cut(s)	5, 34, 59, 350, 534, 2310
Hsp92I	GRCGYC	3 cut(s)	204, 251, 1187
Hsp92II	CATG	9 cut(s)	237, 760, 846, 1273, 1475, 1748, 1922, 2183, 2392
Kpn2I	TCCGGA	3 cut(s)	1369, 1936, 2032
KpnI	GGTACC	1 cut(s)	732
KroI	GCCGGC	1 cut(s)	286
KroNI	GCCGGC	1 cut(s)	288
Ksp22I	TGATCA	1 cut(s)	2202
LmnI	GCTCC	6 cut(s)	484, 784, 1010, 1534, 1711, 1914
Lsp1109I	GCAGC	5 cut(s)	297, 300, 872, 1105, 2084
LweI	GCATC	6 cut(s)	237, 1057, 2101, 2216, 2238, 2260
MaeI	CTAG	4 cut(s)	1022, 1053, 1700, 2381
MaeII	ACGT	6 cut(s)	5, 34, 59, 350, 534, 2310
MaeIII	GTNAC	5 cut(s)	247, 765, 1162, 1674, 2365
MbiI	CCGCTC	1 cut(s)	158
MboII	GAAGA	8 cut(s)	509, 549, 575, 761, 1250, 1460, 1934, 2231
MfeI	CAATTG	1 cut(s)	738
MflI	RGATCY	6 cut(s)	478, 809, 941, 1111, 1372, 1599
MhlI	GDGCHC	6 cut(s)	65, 214, 224, 388, 1539, 1975
MlsI	TGGCCA	1 cut(s)	1347
MluCI	AATT	9 cut(s)	119, 566, 656, 738, 873, 1334, 1794, 2209, 2287
MluNI	TGGCCA	1 cut(s)	1347
MlyI	GAGTC	4 cut(s)	509, 984, 1244, 2074
MmeI	TCCRAC	1 cut(s)	483
Mox20I	TGGCCA	1 cut(s)	1347
Mph1103I	ATGCAT	2 cut(s)	2116, 2231
MroI	TCCGGA	3 cut(s)	1369, 1936, 2032
MroNI	GCCGGC	1 cut(s)	286
MroXI	GAANNNNTTC	2 cut(s)	704, 1929
MscI	TGGCCA	1 cut(s)	1347
MseI	TTAA	3 cut(s)	122, 582, 1584
MslI	CAYNNNNRTG	2 cut(s)	1353, 1612
Msp20I	TGGCCA	1 cut(s)	1347
MspA1I	CMGCKG	2 cut(s)	310, 863
MspI	CCGG	7 cut(s)	207, 287, 527, 716, 1370, 1937, 2033
MspR9I	CCNGG	3 cut(s)	208, 527, 621
MunI	CAATTG	1 cut(s)	738
Mva1269I	GAATGC	2 cut(s)	1284, 1841
MvaI	CCWGG	1 cut(s)	621
MvnI	CGCG	2 cut(s)	190, 260
NaeI	GCCGGC	1 cut(s)	288
NciI	CCSGG	2 cut(s)	208, 527
NcoI	CCATGG	1 cut(s)	233
NdeI	CATATG	2 cut(s)	1294, 1426
NgoMIV	GCCGGC	1 cut(s)	286
NlaIII	CATG	9 cut(s)	237, 760, 846, 1273, 1475, 1748, 1922, 2183, 2392
NlaIV	GGNNCC	7 cut(s)	211, 212, 730, 780, 1374, 1601, 1980
NmeAIII	GCCGAG	1 cut(s)	342
NmuCI	GTSAC	2 cut(s)	247, 1674
NruI	TCGCGA	1 cut(s)	260
NsiI	ATGCAT	2 cut(s)	2116, 2231
NspI	RCATGY	1 cut(s)	1273
NspV	TTCGAA	2 cut(s)	1238, 1897
PagI	TCATGA	3 cut(s)	1744, 1918, 2179
PaqCI	CACCTGC	1 cut(s)	1127
PciI	ACATGT	1 cut(s)	1269
PcsI	WCGNNNNNNNCGW	3 cut(s)	194, 251, 257
PctI	GAATGC	2 cut(s)	1284, 1841
PdiI	GCCGGC	1 cut(s)	288
PdmI	GAANNNNTTC	2 cut(s)	704, 1929
PfeI	GAWTC	3 cut(s)	1412, 1544, 1947
PkrI	GCNGC	5 cut(s)	312, 315, 862, 1120, 2074
Ple19I	CGATCG	1 cut(s)	201
PleI	GAGTC	4 cut(s)	508, 983, 1244, 2073
PpsI	GAGTC	4 cut(s)	508, 983, 1244, 2073
PpuMI	RGGWCCY	2 cut(s)	680, 1323
PscI	ACATGT	1 cut(s)	1269
PsiI	TTATAA	1 cut(s)	2252
Psp124BI	GAGCTC	2 cut(s)	224, 1539
Psp5II	RGGWCCY	2 cut(s)	680, 1323
Psp6I	CCWGG	1 cut(s)	619
PspFI	CCCAGC	2 cut(s)	333, 1013
PspGI	CCWGG	1 cut(s)	619
PspN4I	GGNNCC	7 cut(s)	211, 212, 730, 780, 1374, 1601, 1980
PspOMI	GGGCCC	1 cut(s)	210
PspPI	GGNCC	9 cut(s)	172, 210, 211, 617, 680, 799, 995, 1072, 1323
PspPPI	RGGWCCY	2 cut(s)	680, 1323
PstI	CTGCAG	2 cut(s)	1866, 1959
PstNI	CAGNNNCTG	3 cut(s)	313, 863, 1823
PsuI	RGATCY	6 cut(s)	478, 809, 941, 1111, 1372, 1599
PvuI	CGATCG	1 cut(s)	201
PvuII	CAGCTG	2 cut(s)	310, 863
RruI	TCGCGA	1 cut(s)	260
RsaI	GTAC	4 cut(s)	730, 958, 1274, 1311
RsaNI	GTAC	4 cut(s)	729, 957, 1273, 1310
RseI	CAYNNNNRTG	2 cut(s)	1353, 1612
Rsr2I	CGGWCCG	2 cut(s)	172, 1072
RsrII	CGGWCCG	2 cut(s)	172, 1072
SacI	GAGCTC	2 cut(s)	224, 1539
SaqAI	TTAA	3 cut(s)	122, 582, 1584
SatI	GCNGC	5 cut(s)	311, 314, 861, 1119, 2073
Sau96I	GGNCC	9 cut(s)	172, 210, 211, 617, 680, 799, 995, 1072, 1323
SchI	GAGTC	4 cut(s)	509, 984, 1244, 2074
ScrFI	CCNGG	3 cut(s)	208, 527, 621
SduI	GDGCHC	6 cut(s)	65, 214, 224, 388, 1539, 1975
SfaNI	GCATC	6 cut(s)	237, 1057, 2101, 2216, 2238, 2260
SfcI	CTRYAG	5 cut(s)	492, 855, 1105, 1862, 1955
SfuI	TTCGAA	2 cut(s)	1238, 1897
SinI	GGWCC	6 cut(s)	172, 680, 799, 995, 1072, 1323
SmiMI	CAYNNNNRTG	2 cut(s)	1353, 1612
SmlI	CTYRAG	1 cut(s)	1561
SmoI	CTYRAG	1 cut(s)	1561
Sse9I	AATT	9 cut(s)	119, 566, 656, 738, 873, 1334, 1794, 2209, 2287
SspI	AATATT	1 cut(s)	1737
SspMI	CTAG	4 cut(s)	1022, 1053, 1700, 2381
SstI	GAGCTC	2 cut(s)	224, 1539
StyD4I	CCNGG	3 cut(s)	206, 525, 619
StyI	CCWWGG	4 cut(s)	233, 603, 937, 1455
TaiI	ACGT	6 cut(s)	8, 37, 62, 353, 537, 2313
TaqI	TCGA	7 cut(s)	201, 299, 430, 1238, 1897, 2283, 2298
TasI	AATT	9 cut(s)	119, 566, 656, 738, 873, 1334, 1794, 2209, 2287
TatI	WGTACW	2 cut(s)	956, 1309
TfiI	GAWTC	3 cut(s)	1412, 1544, 1947
Tru1I	TTAA	3 cut(s)	122, 582, 1584
Tru9I	TTAA	3 cut(s)	122, 582, 1584
TseFI	GTSAC	2 cut(s)	247, 1674
TseI	GCWGC	5 cut(s)	310, 313, 860, 1118, 2072
Tsp45I	GTSAC	2 cut(s)	247, 1674
TspGWI	ACGGA	4 cut(s)	172, 309, 1543, 1901
VneI	GTGCAC	2 cut(s)	61, 1971
VpaK11BI	GGWCC	6 cut(s)	172, 680, 799, 995, 1072, 1323
XapI	RAATTY	2 cut(s)	566, 1334
XceI	RCATGY	1 cut(s)	1273
XcmI	CCANNNNNNNNNTGG	1 cut(s)	840
XmiI	GTMKAC	2 cut(s)	1175, 1209
XmnI	GAANNNNTTC	2 cut(s)	704, 1929
XspI	CTAG	4 cut(s)	1022, 1053, 1700, 2381
Zsp2I	ATGCAT	2 cut(s)	2116, 2231

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.