Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb3

Orthogroup ID

OG0009667

Physical Location & Seq

Genomic Coordinates Forward (+)

18013319 .. 18023012

Gene Structure 9694 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_3g24980.t2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGTGGCACTCGAGAGCAACCCGTAACATCCCTTTTCCGCCGAGACTGAAAAACAAAGACTCACAACTCTCACAAGTCAAAACCATGGCGGTCCGAGCCACCGTCTCGCGGTTCCCTATCGACGCCGGCGCGCACGAGAATTCCGGCATACCATGGGGCCTGACGGTGACGCCGTTCGCCACCAAAGACGAGAACGGCCAAGCTCCGGCGTACGGATCCGGCGGTCAATTGTTGCCGCGGTGCGAGAATTGCTGGGCCTACTTCAACACTTACTGCGAGCTTGACCAGTGGTCATGGAACTGTGCTCTCTGCGGCAACCCCCAGGGGCTCTCCTCCGAGGCCATTGCTCGATACTCTCAGCCTCAGTCTTGCCCCGAGATGATGTCATCCTTCGTAGATCTAGAGCTTCCTGTGGAGGAGTCGGATGAAGCAATGCAACCTCGACCGGTCTATGTTGCGGCGATTGATTTGTCCTCTTCTGACGAATTTTTGGAACTTACTAAAAGCGCATTGCTGGCAGCTTTGGAAGCTCTTGGGCCTGGTTCACTGTTTGGTCTTGCTACCTTTAGCCACAAATTAGGATTATATGATGTTCAAGGCCCTATACCAGTTGTCAAAAATGTTTTCATTCCCCCGGAAACAGAGGGAAGCCTACCAATAGAGCTTGAAGATGTCATGCCCCTGTTACAGTTCTTGGCTCCAGTGGAAACTTGTAAGGATCGTATTGCATCAGCACTTGAAACACTTAGACCAACAACTTCATGGGAGAGAACAACAGCAGCAGGGCAAGGAGTAGATGGTGTTTTGATGGGTGGGCGAGGTTTTGGGGTGGCAATTGAAGCTCTTTTGAACTACCTTGGATCTGAATATGGAAGCACATTTGCACTAGGTAGAGTCTTTGCCTTTTTGTCTGGTCCTCCTGATTATGGAGCTGGCCAACTAGATACAAGAAGGTATGGTGAACAATATGCTAGTAGAGGAGAGGATGCGGACCGTGCATTGCTTCCTGAGCAGACACCTTTCTATAAAGATTTGGCTGCTATTGCTGTTCAAGCAGGTGTTTGCGTAGACATCTTTGCTGTTACAAATGAGTATACAGATTTGGCGTCTCTGAAGTTTCTTAGCGTAGAAAGTGGAGGCTCGTTGTATTTGTACTCAAATACTGACGATTCAACACTTCCACAGGACATGTACCGAATGCTAAGTCGTCCATATGCTTTTGGCTGTGTACTGCGATTGAGGACATCATCTGAATTCAAAACTGGTCATTCTTATGGTCACTTCTTTCCAGATCCACAGTATGAGAATGTTCAACACATTATTTGTTGTGATTCTTACGCCACATATGCTTATGACTTCGAGTTTGAAGCTACCAAGGAATTCGCAAAACATGGATCAGAGCCTCCTATTATACAGATTGCATTTCAATACACAGTTGTTTTGCCTCCTGAGGAGCTCACGGAATCGGGATCGGGGTCCTCCTCAGTTAGAGGCAAGTATTCTCTTAGACGACGATTAAGGATTCGGACTGTGCAATGTGGAGTCGCCCAAAATATGAATGAACTCTATGACAGTGTTGATCCTGAAGTGGTTCTCTCATTACTTGTTCACAAGGTTATATTAGCCTCTTTGGAGCAAGGGGTTCGGGAAGGCAGACTGTTATTGCACGATTGGCTTGTGATTCTTACAGCTCAATACAATGAAGCTTATAAACTTGTTCACTACAAGAATGGAAGTTCAGTGACTACTCAAATTGATGTTGCATTCTCACAATGCCCTGAACTGCAGCCTTTACCTCGCTTGGTTTTTGCATTGCTTCGAAATCCTTTGCTCCTTTTTCATGAAGAAGGTGTTCACCCTGATTACCGAATCTACCTACAGTGTCTTTTCAGTGCACTTGAACCAAGTTCACTCCATCGTGCCGTGTATCCAGTCCTTACCTCCTACTCTACTCCAGATAAATTAGCATACCCACGCCATTCATTGAGTCGTGCTGCACTGATTACCAGTGGGAGTCCTATATTTTTCCTTGATGCATTCACAGCTCTTATAGTGTTCTATTCTTCAACAGCAGACCCTACACTACCTTTTCCTCCACCCCATGATTGTTTGCTGCGGACTGTGATCAATAAATTAAAGCAAGAAAGATGTATTACCCCCAAACTCATATTTATCAGAGGAGGACAGGACGATGCCACAGCTTTTGAAAACTATCTCATTGAGGAACAGGATGTTGACGGAAGTGGTATTACAAGCGTCATGGGTTTTGTTTCCTTTCTTGAAGATATTACGCAGAGTGTGTTAGAATACATCAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

773

Amino Acids

85.53

Weight (kDa)

4.96

Isoelectric Point (pI)

45.3

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Sec23_trunk	PF04811	5 - 175	3.8e-21	Sec23/Sec24 trunk domain
Sec23_helical	PF04815	302 - 413	2.2e-14	Sec23/Sec24 helical domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009667)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_3g24980
rosa_chinensis	RchiOBHm_Chr1g0324351 RchiOBHm_Chr5g0016621 RchiOBHm_Chr5g0016631 RchiOBHm_Chr5g0040971 RchiOBHm_Chr5g0044471 RchiOBHm_Chr5g0044481
rosa_multiflora	Rmu_co8474103.1_g000001 Rmu_sc0000164.1_g000005 Rmu_sc0006669.1_g000015 Rmu_sc0006888.1_g000009 Rmu_sc0035804.1_g000001
rosa_roxburghii	Rroxscaffold_1G00036210 Rroxscaffold_5G00347560
rosa_rugosa	Rorug02G0107000
rosa_samantha	Rh1BG053200 Rh1DG100100 Rh5AG298800 Rh5BG306000 Rh5CG138700 Rh5DG315300
rosa_wichuraiana	Rw2G010480

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1710
AarI	CACCTGC	1 cut(s)	1046
Acc36I	ACCTGC	1 cut(s)	1046
AccI	GTMKAC	2 cut(s)	1068, 1094
AccII	CGCG	3 cut(s)	109, 131, 238
AclWI	GGATC	8 cut(s)	210, 223, 726, 868, 1286, 1402, 1477, 1574
AcoI	YGGCCR	2 cut(s)	196, 934
AcsI	RAATTY	4 cut(s)	139, 485, 1253, 1379
AcuI	CTGAAG	2 cut(s)	1133, 1605
AcyI	GRCGYC	3 cut(s)	123, 170, 1106
AfaI	GTAC	4 cut(s)	212, 1154, 1193, 1230
AfiI	CCNNNNNNNGG	4 cut(s)	108, 205, 212, 926
AflIII	ACRYGT	1 cut(s)	1188
AgeI	ACCGGT	1 cut(s)	445
AhdI	GACNNNNNGTC	1 cut(s)	289
AjnI	CCWGG	2 cut(s)	321, 538
Alw21I	GWGCWC	3 cut(s)	307, 1458, 1897
Alw26I	GTCTC	3 cut(s)	37, 109, 1113
Alw44I	GTGCAC	1 cut(s)	1893
AlwI	GGATC	8 cut(s)	210, 223, 726, 868, 1286, 1402, 1477, 1574
Ama87I	CYCGRG	2 cut(s)	10, 374
AoxI	GGCC	7 cut(s)	157, 196, 255, 339, 536, 598, 934
ApaLI	GTGCAC	1 cut(s)	1893
ApeKI	GCWGC	6 cut(s)	518, 779, 1037, 1786, 1994, 2113
ApoI	RAATTY	4 cut(s)	139, 485, 1253, 1379
ArsI	GACNNNNNNTTYG	4 cut(s)	1189, 1221, 1346, 1378
AsiGI	ACCGGT	1 cut(s)	445
Asp700I	GAANNNNTTC	2 cut(s)	1590, 1851
AspLEI	GCGC	3 cut(s)	131, 133, 509
AspS9I	GGNCC	8 cut(s)	91, 157, 255, 536, 599, 914, 991, 1476
AsuC2I	CCSGG	1 cut(s)	635
AsuHPI	GGTGA	3 cut(s)	178, 971, 1847
AsuII	TTCGAA	1 cut(s)	1819
AvaI	CYCGRG	2 cut(s)	10, 374
AvaII	GGWCC	4 cut(s)	91, 914, 991, 1476
AxyI	CCTNAGG	1 cut(s)	1449
BaeGI	GKGCMC	1 cut(s)	1897
BalI	TGGCCA	1 cut(s)	936
BamHI	GGATCC	1 cut(s)	215
BanII	GRGCYC	2 cut(s)	330, 1458
BarI	GAAGNNNNNNTAC	2 cut(s)	2233, 2265
BauI	CACGAG	1 cut(s)	134
Bbv12I	GWGCWC	3 cut(s)	307, 1458, 1897
BbvI	GCAGC	6 cut(s)	530, 791, 1024, 1798, 1981, 2100
BccI	CCATC	3 cut(s)	791, 802, 1923
BceAI	ACGGC	3 cut(s)	157, 211, 1907
BcgI	CGANNNNNNTGC	4 cut(s)	326, 360, 1625, 1659
BciT130I	CCWGG	2 cut(s)	323, 540
BciVI	GTATCC	1 cut(s)	1938
BclI	TGATCA	1 cut(s)	2124
BcnI	CCSGG	1 cut(s)	635
BcoDI	GTCTC	3 cut(s)	37, 109, 1113
BfaI	CTAG	4 cut(s)	401, 887, 941, 972
BfmI	CTRYAG	2 cut(s)	1784, 1877
BfuAI	ACCTGC	1 cut(s)	1046
BfuI	GTATCC	1 cut(s)	1938
BglII	AGATCT	1 cut(s)	397
BisI	GCNGC	9 cut(s)	236, 313, 459, 519, 780, 1038, 1787, 1995, 2114
BlsI	GCNGC	9 cut(s)	237, 314, 460, 520, 781, 1039, 1788, 1996, 2115
Bme1390I	CCNGG	3 cut(s)	323, 540, 635
Bme18I	GGWCC	4 cut(s)	91, 914, 991, 1476
BmeRI	GACNNNNNGTC	1 cut(s)	289
BmeT110I	CYCGRG	2 cut(s)	10, 374
BmgT120I	GGNCC	8 cut(s)	91, 157, 255, 536, 599, 914, 991, 1476
BmiI	GGNNCC	5 cut(s)	113, 158, 217, 699, 1477
BmrFI	CCNGG	3 cut(s)	323, 540, 635
BmsI	GCATC	4 cut(s)	737, 976, 2023, 2182
BpmI	CTGGAG	2 cut(s)	684, 1938
Bpu10I	CCTNAGC	1 cut(s)	1008
Bpu14I	TTCGAA	1 cut(s)	1819
BpuMI	CCSGG	1 cut(s)	635
BsaHI	GRCGYC	3 cut(s)	123, 170, 1106
BsaJI	CCNNGG	9 cut(s)	84, 152, 236, 321, 322, 336, 633, 856, 1374
BsaWI	WCCGGW	1 cut(s)	445
Bsc4I	CCNNNNNNNGG	4 cut(s)	108, 205, 212, 926
Bse118I	RCCGGY	2 cut(s)	125, 445
Bse1I	ACTGG	6 cut(s)	286, 608, 701, 1267, 1931, 2007
Bse21I	CCTNAGG	1 cut(s)	1449
Bse3DI	GCAATG	6 cut(s)	342, 438, 509, 998, 1541, 1811
BseBI	CCWGG	2 cut(s)	323, 540
BseDI	CCNNGG	9 cut(s)	84, 152, 236, 321, 322, 336, 633, 856, 1374
BseGI	GGATG	5 cut(s)	27, 386, 430, 991, 2236
BseLI	CCNNNNNNNGG	4 cut(s)	108, 205, 212, 926
BseMI	GCAATG	6 cut(s)	342, 438, 509, 998, 1541, 1811
BseMII	CTCAG	5 cut(s)	371, 377, 999, 1440, 1497
BseNI	ACTGG	6 cut(s)	286, 608, 701, 1267, 1931, 2007
BsePI	GCGCGC	1 cut(s)	129
BseRI	GAGGAG	6 cut(s)	322, 431, 993, 1466, 1471, 2193
BseSI	GKGCMC	1 cut(s)	1897
BseXI	GCAGC	6 cut(s)	530, 791, 1024, 1798, 1981, 2100
BseYI	CCCAGC	1 cut(s)	252
BsgI	GTGCAG	1 cut(s)	1980
Bsh1236I	CGCG	3 cut(s)	109, 131, 238
Bsh1285I	CGRYCG	1 cut(s)	446
BshFI	GGCC	7 cut(s)	159, 198, 257, 341, 538, 600, 936
BshTI	ACCGGT	1 cut(s)	445
BsiEI	CGRYCG	1 cut(s)	446
BsiHKAI	GWGCWC	3 cut(s)	307, 1458, 1897
BsiHKCI	CYCGRG	2 cut(s)	10, 374
BsiSI	CCGG	6 cut(s)	126, 144, 206, 219, 446, 635
BsiWI	CGTACG	1 cut(s)	210
BslI	CCNNNNNNNGG	4 cut(s)	108, 205, 212, 926
BsmAI	GTCTC	3 cut(s)	37, 109, 1113
BsmBI	CGTCTC	2 cut(s)	109, 1113
BsmI	GAATGC	3 cut(s)	1203, 1763, 2036
BsnI	GGCC	7 cut(s)	159, 198, 257, 341, 538, 600, 936
BsoBI	CYCGRG	2 cut(s)	10, 374
Bsp119I	TTCGAA	1 cut(s)	1819
Bsp1286I	GDGCHC	4 cut(s)	307, 330, 1458, 1897
Bsp143I	GATC	9 cut(s)	215, 397, 718, 860, 1291, 1394, 1469, 1579, 2124
Bsp19I	CCATGG	2 cut(s)	84, 152
BspANI	GGCC	7 cut(s)	159, 198, 257, 341, 538, 600, 936
BspCNI	CTCAG	5 cut(s)	370, 376, 1000, 1441, 1496
BspFNI	CGCG	3 cut(s)	109, 131, 238
BspHI	TCATGA	1 cut(s)	1840
BspLI	GGNNCC	5 cut(s)	113, 158, 217, 699, 1477
BspMAI	CTGCAG	1 cut(s)	1788
BspMI	ACCTGC	1 cut(s)	1046
BspPI	GGATC	8 cut(s)	210, 223, 726, 868, 1286, 1402, 1477, 1574
BspT104I	TTCGAA	1 cut(s)	1819
BsrDI	GCAATG	6 cut(s)	342, 438, 509, 998, 1541, 1811
BsrFI	RCCGGY	2 cut(s)	125, 445
BsrI	ACTGG	6 cut(s)	286, 608, 701, 1267, 1931, 2007
BssAI	RCCGGY	2 cut(s)	125, 445
BssECI	CCNNGG	9 cut(s)	84, 152, 236, 321, 322, 336, 633, 856, 1374
BssHII	GCGCGC	1 cut(s)	129
BssMI	GATC	9 cut(s)	215, 397, 718, 860, 1291, 1394, 1469, 1579, 2124
BssNAI	GTATAC	1 cut(s)	1095
BssNI	GRCGYC	3 cut(s)	123, 170, 1106
BssSI	CACGAG	1 cut(s)	134
BssT1I	CCWWGG	4 cut(s)	84, 152, 856, 1374
Bst1107I	GTATAC	1 cut(s)	1095
Bst2BI	CACGAG	1 cut(s)	134
Bst2UI	CCWGG	2 cut(s)	323, 540
Bst6I	CTCTTC	1 cut(s)	481
BstACI	GRCGYC	3 cut(s)	123, 170, 1106
BstBI	TTCGAA	1 cut(s)	1819
BstC8I	GCNNGC	5 cut(s)	127, 131, 278, 516, 934
BstDEI	CTNAG	9 cut(s)	357, 363, 746, 1008, 1121, 1202, 1449, 1483, 1505
BstDSI	CCRYGG	3 cut(s)	84, 152, 236
BstF5I	GGATG	5 cut(s)	27, 386, 430, 991, 2236
BstFNI	CGCG	3 cut(s)	109, 131, 238
BstHHI	GCGC	3 cut(s)	131, 133, 509
BstKTI	GATC	9 cut(s)	218, 400, 721, 863, 1294, 1397, 1472, 1582, 2127
BstMAI	GTCTC	3 cut(s)	37, 109, 1113
BstMBI	GATC	9 cut(s)	215, 397, 718, 860, 1291, 1394, 1469, 1579, 2124
BstMCI	CGRYCG	1 cut(s)	446
BstNI	CCWGG	2 cut(s)	323, 540
BstNSI	RCATGY	1 cut(s)	1192
BstSCI	CCNGG	3 cut(s)	321, 538, 633
BstSFI	CTRYAG	2 cut(s)	1784, 1877
BstSLI	GKGCMC	1 cut(s)	1897
BstUI	CGCG	3 cut(s)	109, 131, 238
BstV1I	GCAGC	6 cut(s)	530, 791, 1024, 1798, 1981, 2100
BstX2I	RGATCY	4 cut(s)	215, 397, 860, 1291
BstYI	RGATCY	4 cut(s)	215, 397, 860, 1291
BstZ17I	GTATAC	1 cut(s)	1095
Bsu36I	CCTNAGG	1 cut(s)	1449
BsuI	GTATCC	1 cut(s)	1938
BsuRI	GGCC	7 cut(s)	159, 198, 257, 341, 538, 600, 936
BtgI	CCRYGG	3 cut(s)	84, 152, 236
BtsCI	GGATG	5 cut(s)	27, 386, 430, 991, 2236
BtsIMutI	CAGTG	9 cut(s)	293, 545, 708, 1579, 1746, 1886, 1897, 1997, 2014
BveI	ACCTGC	1 cut(s)	1046
Cac8I	GCNNGC	5 cut(s)	127, 131, 278, 516, 934
CciI	TCATGA	1 cut(s)	1840
CfoI	GCGC	3 cut(s)	131, 133, 509
Cfr10I	RCCGGY	2 cut(s)	125, 445
Cfr13I	GGNCC	8 cut(s)	91, 157, 255, 536, 599, 914, 991, 1476
Cfr42I	CCGCGG	1 cut(s)	239
CpoI	CGGWCCG	2 cut(s)	91, 991
CseI	GACGC	4 cut(s)	131, 178, 1095, 2245
Csp6I	GTAC	4 cut(s)	211, 1153, 1192, 1229
CspAI	ACCGGT	1 cut(s)	445
CspCI	CAANNNNNGTGG	2 cut(s)	2185, 2220
CspI	CGGWCCG	2 cut(s)	91, 991
CviQI	GTAC	4 cut(s)	211, 1153, 1192, 1229
DdeI	CTNAG	9 cut(s)	357, 363, 746, 1008, 1121, 1202, 1449, 1483, 1505
DpnI	GATC	9 cut(s)	217, 399, 720, 862, 1293, 1396, 1471, 1581, 2126
DpnII	GATC	9 cut(s)	215, 397, 718, 860, 1291, 1394, 1469, 1579, 2124
DriI	GACNNNNNGTC	1 cut(s)	289
EaeI	YGGCCR	2 cut(s)	196, 934
Eam1104I	CTCTTC	1 cut(s)	481
Eam1105I	GACNNNNNGTC	1 cut(s)	289
EarI	CTCTTC	1 cut(s)	481
EciI	GGCGGA	1 cut(s)	27
Ecl136II	GAGCTC	1 cut(s)	1456
Eco130I	CCWWGG	4 cut(s)	84, 152, 856, 1374
Eco24I	GRGCYC	2 cut(s)	330, 1458
Eco47I	GGWCC	4 cut(s)	91, 914, 991, 1476
Eco53kI	GAGCTC	1 cut(s)	1456
Eco57I	CTGAAG	2 cut(s)	1133, 1605
Eco81I	CCTNAGG	1 cut(s)	1449
Eco88I	CYCGRG	2 cut(s)	10, 374
EcoICRI	GAGCTC	1 cut(s)	1456
EcoO109I	RGGNCCY	3 cut(s)	157, 599, 1476
EcoRI	GAATTC	3 cut(s)	139, 1253, 1379
EcoRII	CCWGG	2 cut(s)	321, 538
EcoT14I	CCWWGG	4 cut(s)	84, 152, 856, 1374
EcoT22I	ATGCAT	1 cut(s)	2038
EcoT38I	GRGCYC	2 cut(s)	330, 1458
ErhI	CCWWGG	4 cut(s)	84, 152, 856, 1374
Esp3I	CGTCTC	2 cut(s)	109, 1113
FauNDI	CATATG	2 cut(s)	1213, 1345
FbaI	TGATCA	1 cut(s)	2124
FblI	GTMKAC	2 cut(s)	1068, 1094
Fnu4HI	GCNGC	9 cut(s)	236, 313, 459, 519, 780, 1038, 1787, 1995, 2114
FokI	GGATG	5 cut(s)	14, 373, 437, 998, 2243
FriOI	GRGCYC	2 cut(s)	330, 1458
Fsp4HI	GCNGC	9 cut(s)	236, 313, 459, 519, 780, 1038, 1787, 1995, 2114
FspBI	CTAG	4 cut(s)	401, 887, 941, 972
GlaI	GCGC	3 cut(s)	130, 132, 508
GluI	GCNGC	9 cut(s)	236, 313, 459, 519, 780, 1038, 1787, 1995, 2114
GsaI	CCCAGC	1 cut(s)	256
GsuI	CTGGAG	2 cut(s)	684, 1938
HaeIII	GGCC	7 cut(s)	159, 198, 257, 341, 538, 600, 936
HapII	CCGG	6 cut(s)	126, 144, 206, 219, 446, 635
HgaI	GACGC	4 cut(s)	131, 178, 1095, 2245
HhaI	GCGC	3 cut(s)	131, 133, 509
Hin1I	GRCGYC	3 cut(s)	123, 170, 1106
Hin6I	GCGC	3 cut(s)	129, 131, 507
HinP1I	GCGC	3 cut(s)	129, 131, 507
HincII	GTYRAC	1 cut(s)	2236
HindII	GTYRAC	1 cut(s)	2236
HindIII	AAGCTT	1 cut(s)	1704
HpaII	CCGG	6 cut(s)	126, 144, 206, 219, 446, 635
HphI	GGTGA	3 cut(s)	178, 971, 1847
Hpy99I	CGWCG	2 cut(s)	125, 1515
HpyAV	CCTTC	4 cut(s)	400, 945, 1643, 1841
HpyF3I	CTNAG	9 cut(s)	357, 363, 746, 1008, 1121, 1202, 1449, 1483, 1505
Hsp92I	GRCGYC	3 cut(s)	123, 170, 1106
HspAI	GCGC	3 cut(s)	129, 131, 507
KroI	GCCGGC	1 cut(s)	125
KroNI	GCCGGC	1 cut(s)	127
Ksp22I	TGATCA	1 cut(s)	2124
KspI	CCGCGG	1 cut(s)	239
Kzo9I	GATC	9 cut(s)	215, 397, 718, 860, 1291, 1394, 1469, 1579, 2124
LmnI	GCTCC	6 cut(s)	208, 703, 929, 1453, 1633, 1836
Lsp1109I	GCAGC	6 cut(s)	530, 791, 1024, 1798, 1981, 2100
LweI	GCATC	4 cut(s)	737, 976, 2023, 2182
MaeI	CTAG	4 cut(s)	401, 887, 941, 972
MaeIII	GTNAC	6 cut(s)	23, 166, 684, 1081, 1277, 1741
MalI	GATC	9 cut(s)	217, 399, 720, 862, 1293, 1396, 1471, 1581, 2126
MboI	GATC	9 cut(s)	215, 397, 718, 860, 1291, 1394, 1469, 1579, 2124
MboII	GAAGA	5 cut(s)	468, 680, 1856, 2055, 2294
MfeI	CAATTG	2 cut(s)	227, 834
MflI	RGATCY	4 cut(s)	215, 397, 860, 1291
MhlI	GDGCHC	4 cut(s)	307, 330, 1458, 1897
MlsI	TGGCCA	1 cut(s)	936
MluNI	TGGCCA	1 cut(s)	936
MlyI	GAGTC	6 cut(s)	53, 428, 903, 1551, 1996, 2023
MmeI	TCCRAC	1 cut(s)	402
Mox20I	TGGCCA	1 cut(s)	936
Mph1103I	ATGCAT	1 cut(s)	2038
MreI	CGCCGGCG	1 cut(s)	125
MroNI	GCCGGC	1 cut(s)	125
MroXI	GAANNNNTTC	2 cut(s)	1590, 1851
MscI	TGGCCA	1 cut(s)	936
MseI	TTAA	2 cut(s)	1517, 2135
MslI	CAYNNNNRTG	1 cut(s)	1272
Msp20I	TGGCCA	1 cut(s)	936
MspA1I	CMGCKG	1 cut(s)	238
MspI	CCGG	6 cut(s)	126, 144, 206, 219, 446, 635
MspR9I	CCNGG	3 cut(s)	323, 540, 635
MunI	CAATTG	2 cut(s)	227, 834
Mva1269I	GAATGC	3 cut(s)	1203, 1763, 2036
MvaI	CCWGG	2 cut(s)	323, 540
MvnI	CGCG	3 cut(s)	109, 131, 238
NaeI	GCCGGC	1 cut(s)	127
NciI	CCSGG	1 cut(s)	635
NcoI	CCATGG	2 cut(s)	84, 152
NdeI	CATATG	2 cut(s)	1213, 1345
NdeII	GATC	9 cut(s)	215, 397, 718, 860, 1291, 1394, 1469, 1579, 2124
NgoMIV	GCCGGC	1 cut(s)	125
NlaIV	GGNNCC	5 cut(s)	113, 158, 217, 699, 1477
NmeAIII	GCCGAG	1 cut(s)	66
NmuCI	GTSAC	3 cut(s)	166, 1277, 1741
NsiI	ATGCAT	1 cut(s)	2038
NspI	RCATGY	1 cut(s)	1192
NspV	TTCGAA	1 cut(s)	1819
PaeR7I	CTCGAG	1 cut(s)	10
PagI	TCATGA	1 cut(s)	1840
PaqCI	CACCTGC	1 cut(s)	1046
PasI	CCCWGGG	1 cut(s)	322
PauI	GCGCGC	1 cut(s)	129
PciI	ACATGT	1 cut(s)	1188
PcsI	WCGNNNNNNNCGW	1 cut(s)	170
PctI	GAATGC	3 cut(s)	1203, 1763, 2036
PdiI	GCCGGC	1 cut(s)	127
PdmI	GAANNNNTTC	2 cut(s)	1590, 1851
PfeI	GAWTC	6 cut(s)	1169, 1331, 1463, 1522, 1681, 1869
Pfl23II	CGTACG	1 cut(s)	210
PinAI	ACCGGT	1 cut(s)	445
PkrI	GCNGC	9 cut(s)	237, 314, 460, 520, 781, 1039, 1788, 1996, 2115
PleI	GAGTC	6 cut(s)	53, 427, 902, 1550, 1995, 2022
PpsI	GAGTC	6 cut(s)	53, 427, 902, 1550, 1995, 2022
PpuMI	RGGWCCY	1 cut(s)	1476
PscI	ACATGT	1 cut(s)	1188
PsiI	TTATAA	1 cut(s)	1710
Psp124BI	GAGCTC	1 cut(s)	1458
Psp5II	RGGWCCY	1 cut(s)	1476
Psp6I	CCWGG	2 cut(s)	321, 538
PspFI	CCCAGC	1 cut(s)	252
PspGI	CCWGG	2 cut(s)	321, 538
PspLI	CGTACG	1 cut(s)	210
PspN4I	GGNNCC	5 cut(s)	113, 158, 217, 699, 1477
PspPI	GGNCC	8 cut(s)	91, 157, 255, 536, 599, 914, 991, 1476
PspPPI	RGGWCCY	1 cut(s)	1476
PstI	CTGCAG	1 cut(s)	1788
PsuI	RGATCY	4 cut(s)	215, 397, 860, 1291
PteI	GCGCGC	1 cut(s)	129
RsaI	GTAC	4 cut(s)	212, 1154, 1193, 1230
RsaNI	GTAC	4 cut(s)	211, 1153, 1192, 1229
RseI	CAYNNNNRTG	1 cut(s)	1272
Rsr2I	CGGWCCG	2 cut(s)	91, 991
RsrII	CGGWCCG	2 cut(s)	91, 991
SacI	GAGCTC	1 cut(s)	1458
SacII	CCGCGG	1 cut(s)	239
SaqAI	TTAA	2 cut(s)	1517, 2135
SatI	GCNGC	9 cut(s)	236, 313, 459, 519, 780, 1038, 1787, 1995, 2114
Sau3AI	GATC	9 cut(s)	215, 397, 718, 860, 1291, 1394, 1469, 1579, 2124
Sau96I	GGNCC	8 cut(s)	91, 157, 255, 536, 599, 914, 991, 1476
SchI	GAGTC	6 cut(s)	53, 428, 903, 1551, 1996, 2023
ScrFI	CCNGG	3 cut(s)	323, 540, 635
SduI	GDGCHC	4 cut(s)	307, 330, 1458, 1897
SfaNI	GCATC	4 cut(s)	737, 976, 2023, 2182
SfcI	CTRYAG	2 cut(s)	1784, 1877
Sfr274I	CTCGAG	1 cut(s)	10
Sfr303I	CCGCGG	1 cut(s)	239
SfuI	TTCGAA	1 cut(s)	1819
SgrAI	CRCCGGYG	1 cut(s)	125
SgrBI	CCGCGG	1 cut(s)	239
SinI	GGWCC	4 cut(s)	91, 914, 991, 1476
SlaI	CTCGAG	1 cut(s)	10
SmiMI	CAYNNNNRTG	1 cut(s)	1272
SmlI	CTYRAG	1 cut(s)	10
SmoI	CTYRAG	1 cut(s)	10
SspMI	CTAG	4 cut(s)	401, 887, 941, 972
SstI	GAGCTC	1 cut(s)	1458
StyD4I	CCNGG	3 cut(s)	321, 538, 633
StyI	CCWWGG	4 cut(s)	84, 152, 856, 1374
TaqI	TCGA	6 cut(s)	11, 120, 349, 442, 1359, 1819
TatI	WGTACW	2 cut(s)	1152, 1228
TauI	GCSGC	3 cut(s)	238, 315, 461
TfiI	GAWTC	6 cut(s)	1169, 1331, 1463, 1522, 1681, 1869
Tru1I	TTAA	2 cut(s)	1517, 2135
Tru9I	TTAA	2 cut(s)	1517, 2135
TscAI	CASTG	9 cut(s)	293, 552, 708, 1579, 1746, 1886, 1897, 2004, 2014
TseFI	GTSAC	3 cut(s)	166, 1277, 1741
TseI	GCWGC	6 cut(s)	518, 779, 1037, 1786, 1994, 2113
Tsp45I	GTSAC	3 cut(s)	166, 1277, 1741
TspDTI	ATGAA	9 cut(s)	441, 616, 750, 1571, 1575, 1716, 1829, 1857, 1971
TspGWI	ACGGA	3 cut(s)	228, 1475, 2253
TspRI	CASTG	9 cut(s)	293, 552, 708, 1579, 1746, 1886, 1897, 2004, 2014
VneI	GTGCAC	1 cut(s)	1893
VpaK11BI	GGWCC	4 cut(s)	91, 914, 991, 1476
XapI	RAATTY	4 cut(s)	139, 485, 1253, 1379
XbaI	TCTAGA	1 cut(s)	400
XceI	RCATGY	1 cut(s)	1192
XcmI	CCANNNNNNNNNTGG	1 cut(s)	759
XhoI	CTCGAG	1 cut(s)	10
XmiI	GTMKAC	2 cut(s)	1068, 1094
XmnI	GAANNNNTTC	2 cut(s)	1590, 1851
XspI	CTAG	4 cut(s)	401, 887, 941, 972
Zsp2I	ATGCAT	1 cut(s)	2038

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.