Protein transport protein Sec24-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g24980 |
| rosa_chinensis | RchiOBHm_Chr1g0324351 RchiOBHm_Chr5g0016621 RchiOBHm_Chr5g0016631 RchiOBHm_Chr5g0040971 RchiOBHm_Chr5g0044471 RchiOBHm_Chr5g0044481 |
| rosa_multiflora | Rmu_co8474103.1_g000001 Rmu_sc0000164.1_g000005 Rmu_sc0006669.1_g000015 Rmu_sc0006888.1_g000009 Rmu_sc0035804.1_g000001 |
| rosa_roxburghii | Rroxscaffold_1G00036210 Rroxscaffold_5G00347560 |
| rosa_rugosa | Rorug02G0107000 |
| rosa_samantha | Rh1BG053200 Rh1DG100100 Rh5AG298800 Rh5BG306000 Rh5CG138700 Rh5DG315300 |
| rosa_wichuraiana | Rw2G010480 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 1 cut(s) | 152 |
| AcuI | CTGAAG | 1 cut(s) | 183 |
| AgsI | TTSAA | 1 cut(s) | 272 |
| AluBI | AGCT | 1 cut(s) | 284 |
| AluI | AGCT | 1 cut(s) | 284 |
| AlwI | GGATC | 1 cut(s) | 152 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 323 |
| ApeKI | GCWGC | 1 cut(s) | 364 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 168 |
| BbvI | GCAGC | 1 cut(s) | 376 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 203, 237 |
| BfmI | CTRYAG | 1 cut(s) | 362 |
| BglII | AGATCT | 1 cut(s) | 40 |
| BisI | GCNGC | 1 cut(s) | 365 |
| BlsI | GCNGC | 1 cut(s) | 366 |
| BsaJI | CCNNGG | 1 cut(s) | 207 |
| Bse3DI | GCAATG | 2 cut(s) | 119, 389 |
| BseDI | CCNNGG | 1 cut(s) | 207 |
| BseGI | GGATG | 1 cut(s) | 34 |
| BseMI | GCAATG | 2 cut(s) | 119, 389 |
| BseXI | GCAGC | 1 cut(s) | 376 |
| BsmI | GAATGC | 2 cut(s) | 76, 341 |
| Bsp143I | GATC | 2 cut(s) | 40, 157 |
| BspMAI | CTGCAG | 1 cut(s) | 366 |
| BspPI | GGATC | 1 cut(s) | 152 |
| BsrDI | GCAATG | 2 cut(s) | 119, 389 |
| BssECI | CCNNGG | 1 cut(s) | 207 |
| BssMI | GATC | 2 cut(s) | 40, 157 |
| BssT1I | CCWWGG | 1 cut(s) | 207 |
| Bst4CI | ACNGT | 4 cut(s) | 152, 237, 268, 325 |
| BstC8I | GCNNGC | 1 cut(s) | 74 |
| BstDEI | CTNAG | 1 cut(s) | 14 |
| BstF5I | GGATG | 1 cut(s) | 34 |
| BstKTI | GATC | 2 cut(s) | 43, 160 |
| BstMBI | GATC | 2 cut(s) | 40, 157 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 250 |
| BstSFI | CTRYAG | 1 cut(s) | 362 |
| BstV1I | GCAGC | 1 cut(s) | 376 |
| BstX2I | RGATCY | 1 cut(s) | 40 |
| BstYI | RGATCY | 1 cut(s) | 40 |
| BtsCI | GGATG | 1 cut(s) | 34 |
| BtsIMutI | CAGTG | 2 cut(s) | 157, 324 |
| Cac8I | GCNNGC | 1 cut(s) | 74 |
| CaiI | CAGNNNCTG | 1 cut(s) | 323 |
| CviAII | CATG | 1 cut(s) | 133 |
| CviJI | RGCY | 4 cut(s) | 203, 253, 284, 367 |
| CviKI_1 | RGCY | 4 cut(s) | 203, 253, 284, 367 |
| DdeI | CTNAG | 1 cut(s) | 14 |
| DpnI | GATC | 2 cut(s) | 42, 159 |
| DpnII | GATC | 2 cut(s) | 40, 157 |
| Eco130I | CCWWGG | 1 cut(s) | 207 |
| Eco57I | CTGAAG | 1 cut(s) | 183 |
| EcoT14I | CCWWGG | 1 cut(s) | 207 |
| ErhI | CCWWGG | 1 cut(s) | 207 |
| FaeI | CATG | 1 cut(s) | 136 |
| FaiI | YATR | 4 cut(s) | 134, 147, 197, 288 |
| FatI | CATG | 1 cut(s) | 132 |
| Fnu4HI | GCNGC | 1 cut(s) | 365 |
| FokI | GGATG | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 1 cut(s) | 365 |
| GluI | GCNGC | 1 cut(s) | 365 |
| Hin1II | CATG | 1 cut(s) | 136 |
| HinfI | GANTC | 2 cut(s) | 120, 259 |
| Hpy166II | GTNNAC | 2 cut(s) | 187, 298 |
| Hpy188I | TCNGA | 2 cut(s) | 40, 264 |
| Hpy188III | TCNNGA | 2 cut(s) | 161, 224 |
| Hpy8I | GTNNAC | 2 cut(s) | 187, 298 |
| Hpy99I | CGWCG | 1 cut(s) | 93 |
| HpyAV | CCTTC | 1 cut(s) | 221 |
| HpyCH4III | ACNGT | 4 cut(s) | 152, 237, 268, 325 |
| HpyCH4V | TGCA | 5 cut(s) | 112, 244, 341, 364, 389 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 250 |
| HpyF3I | CTNAG | 1 cut(s) | 14 |
| Hsp92II | CATG | 1 cut(s) | 136 |
| Kzo9I | GATC | 2 cut(s) | 40, 157 |
| LmnI | GCTCC | 1 cut(s) | 211 |
| LpnPI | CCDG | 3 cut(s) | 31, 54, 174 |
| Lsp1109I | GCAGC | 1 cut(s) | 376 |
| MaeIII | GTNAC | 2 cut(s) | 9, 319 |
| MalI | GATC | 2 cut(s) | 42, 159 |
| MboI | GATC | 2 cut(s) | 40, 157 |
| MflI | RGATCY | 1 cut(s) | 40 |
| MluCI | AATT | 1 cut(s) | 330 |
| MlyI | GAGTC | 1 cut(s) | 129 |
| MnlI | CCTC | 3 cut(s) | 19, 214, 224 |
| MroXI | GAANNNNTTC | 1 cut(s) | 168 |
| MseI | TTAA | 2 cut(s) | 84, 95 |
| Mva1269I | GAATGC | 2 cut(s) | 76, 341 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 250 |
| NdeII | GATC | 2 cut(s) | 40, 157 |
| NlaIII | CATG | 1 cut(s) | 136 |
| NmuCI | GTSAC | 1 cut(s) | 319 |
| PctI | GAATGC | 2 cut(s) | 76, 341 |
| PdmI | GAANNNNTTC | 1 cut(s) | 168 |
| PfeI | GAWTC | 1 cut(s) | 259 |
| PkrI | GCNGC | 1 cut(s) | 366 |
| PleI | GAGTC | 1 cut(s) | 128 |
| PpsI | GAGTC | 1 cut(s) | 128 |
| PstI | CTGCAG | 1 cut(s) | 366 |
| PstNI | CAGNNNCTG | 1 cut(s) | 323 |
| PsuI | RGATCY | 1 cut(s) | 40 |
| SaqAI | TTAA | 2 cut(s) | 84, 95 |
| SatI | GCNGC | 1 cut(s) | 365 |
| Sau3AI | GATC | 2 cut(s) | 40, 157 |
| SchI | GAGTC | 1 cut(s) | 129 |
| SetI | ASST | 3 cut(s) | 61, 195, 286 |
| SfcI | CTRYAG | 1 cut(s) | 362 |
| Sse9I | AATT | 1 cut(s) | 330 |
| StyI | CCWWGG | 1 cut(s) | 207 |
| TaaI | ACNGT | 4 cut(s) | 152, 237, 268, 325 |
| TasI | AATT | 1 cut(s) | 330 |
| TfiI | GAWTC | 1 cut(s) | 259 |
| Tru1I | TTAA | 2 cut(s) | 84, 95 |
| Tru9I | TTAA | 2 cut(s) | 84, 95 |
| TscAI | CASTG | 2 cut(s) | 157, 324 |
| TseFI | GTSAC | 1 cut(s) | 319 |
| TseI | GCWGC | 1 cut(s) | 364 |
| Tsp45I | GTSAC | 1 cut(s) | 319 |
| TspDTI | ATGAA | 3 cut(s) | 149, 153, 294 |
| TspGWI | ACGGA | 1 cut(s) | 324 |
| TspRI | CASTG | 2 cut(s) | 157, 324 |
| XmnI | GAANNNNTTC | 1 cut(s) | 168 |