Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004567.1

Orthogroup ID

OG0011378

Physical Location & Seq

Genomic Coordinates Forward (+)

86972 .. 97558

Gene Structure 10587 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004567.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2289 bp

atggtagcgaaatgggcattcactcacccgcagcaaagcgcgggctctggtctcacgttccgctccgcaaggccgcatttgaaattggattgcttgcttgaagctgagaactccggcataccatggggcctcaccgtgacgccgttcgcgaccaaagacgagagcggtcaacctccggcgtacggatccggcggtcaattgctgccgcggtgcgagaactgctgggcttacttcaacacttactgcgagctggaccagtggtcatggaactgtgccctctgcggcaacccccagggactttcctctgaggccattgctcgatactctcaccctcagtcttgccccgagatgatctcctccttcgtagatctagagcttcctgtggaagagtcggatgaggcaatgcaacctcgcccggtttatgttgcggccattgatttgtcctcttcggaagaatttttggaacttactaaaagtgcattgctggcagctttggaagctcttgggcctggttcgctgtttggtcttgctacctttagccacaaactaggattgtatgatgttcaaggccctataccagttgtaaaaaatgttttcattcccccggaaacagagggcagcctaccaattgagcttgaagatgtcatgcccttgttacagttcctggctccagtggaaacttgtaaggaccgtattggatcagcacttgaaacaattagaccaacaacttcatgggagagaacaacagcagcagggcaaggagtagatggtgtcttgatgggtgggcgaggttttggggtggcaattgaagcccttttgaactaccttggatctgaatatggaagcacatttgcactaggtagagtctttgcctttttgtctggtcctcctgactatggagctgggcaactagatacaagaaggtatggtgaacaatatgctagtagaggagaggatgcggaccgtgcattgcttcctgagcagacacctttctataaagatttggctgctgtcgctgttcaagctggtgtttgcgtagacatctttgctgttacaaatgagtatacagatttggcgtctctgaagtttcttagcgtagaaagtggaggctcattgtacttttattcaaatactgatgattcaacacttccacaggacatgtaccggatgctaagtcgaccatatgcttttggctgtgtactgcgattgaggacatcatctgaattcaaaactggtcattcttatggtcacttctttccagatccacagtatgagaatgttcaacacattatctgttgtgattcttacgccacatatgcttatgactttgagtttgaagctaccaaggaattttcaaaacatggatcagaacctcctattatacagattgcgtttcaatacacagtcgttctgcctcctgaggagctcaccaattcgggattggtttcctcagttagaggcaagcattctcttaaacgacgattaaggattcggactttgcaatgtggagtcgcccaaaacatgaatgaactctatgacagtgttgatcctgaagtggttctctcattacttgttcacaaggttatattagcctccttggagcaaggggttcgggaaggaagactgttattgcacgattggcttgtgattctaacagctcaatacaatgaagcttataaaattgttcactacaagaacggaagttcagtgactgcccaaattgatgttgcattctcacaatgccccgaactgcagcctttaccccgattagtttttgcattgcttcgaaatcctctgctcctttttcatgaagaaggtgttcatcccgattaccgaatctacctacagtgtcttttcagtgcacttgaaccaagttcacttcatcgtgccgtgtatccagtcctcacctcatattctactcccgataaactagcatacccacgccattcattgagtcgtgctgcactgattaccagtggtagtccgatatttttccttgatgcattcactgctcttattgtgttctattcttcaacggcagaccctactctaccttttcctccaccccatgattgtttgctgcggactgagatcaataaattaaagcaagagagatgtattacccctaaactcatatttatcagaggagggcaggacgatgccacagcttttgaaaactatctcatcgaggaacaggacgttgacggaagtggtataacaagcgttatgggttttgtttcctttcttgaagatattacacaaagtgtgttagaatacatcaagtcttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko04141 map04141

Pfam Domains

Protein Families

Sec23_helical Sec23_trunk zf-Sec23_Sec24

Protein Analysis

762

Amino Acids

84.32

Weight (kDa)

4.91

Isoelectric Point (pI)

44.2

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011378)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G27460
fragaria_vesca	FvH4_3g24980
malus_domestica	MD03G1145900.v1.1 MD11G1164800.v1.1
prunus_persica	Prupe.6G130700_v2.0.a1 Prupe.6G130700_v2.0.a1
pyrus_communis	pycom03g10000 pycom439g00040
rosa_chinensis	RchiOBHm_Chr5g0040981 RchiOBHm_Chr5g0044841 RchiOBHm_Chr5g0045601
rosa_laevigata	RLG00000034301
rosa_multiflora	Rmu_sc0004567.1_g000018
rosa_roxburghii	Rroxscaffold_1G00034820 Rroxscaffold_1G00036200
rosa_rugosa	Rorug05G0219300
rosa_samantha	Rh5AG301100 Rh5CG335200 Rh5DG318500
rosa_wichuraiana	Rw5G027910

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1677
AccBSI	CCGCTC	2 cut(s)	63, 165
AccI	GTMKAC	3 cut(s)	1038, 1064, 1177
AccII	CGCG	3 cut(s)	41, 149, 208
AclWI	GGATC	7 cut(s)	180, 193, 706, 838, 1256, 1372, 1541
AcoI	YGGCCR	1 cut(s)	429
AcsI	RAATTY	3 cut(s)	455, 1223, 1349
AcuI	CTGAAG	2 cut(s)	1103, 1572
AcyI	GRCGYC	2 cut(s)	140, 1076
AdeI	CACNNNGTG	1 cut(s)	2264
AfaI	GTAC	4 cut(s)	182, 1118, 1163, 1200
AfiI	CCNNNNNNNGG	2 cut(s)	182, 896
AflIII	ACRYGT	1 cut(s)	1158
AhdI	GACNNNNNGTC	1 cut(s)	259
AjnI	CCWGG	3 cut(s)	291, 508, 663
Alw21I	GWGCWC	2 cut(s)	1428, 1864
Alw26I	GTCTC	2 cut(s)	56, 1083
Alw44I	GTGCAC	1 cut(s)	1860
AlwI	GGATC	7 cut(s)	180, 193, 706, 838, 1256, 1372, 1541
AlwNI	CAGNNNCTG	2 cut(s)	664, 1712
Ama87I	CYCGRG	1 cut(s)	344
AoxI	GGCC	6 cut(s)	71, 127, 309, 429, 506, 568
ApaLI	GTGCAC	1 cut(s)	1860
ApeKI	GCWGC	9 cut(s)	31, 202, 488, 618, 749, 1007, 1753, 1961, 2080
ApoI	RAATTY	3 cut(s)	455, 1223, 1349
ArsI	GACNNNNNNTTYG	2 cut(s)	1316, 1348
Asp700I	GAANNNNTTC	2 cut(s)	1557, 1818
AspLEI	GCGC	1 cut(s)	41
AspS9I	GGNCC	7 cut(s)	127, 253, 506, 569, 688, 884, 961
AsuC2I	CCSGG	2 cut(s)	416, 605
AsuHPI	GGTGA	6 cut(s)	17, 124, 320, 941, 1420, 1897
AsuII	TTCGAA	1 cut(s)	1786
AvaI	CYCGRG	1 cut(s)	344
AvaII	GGWCC	4 cut(s)	253, 688, 884, 961
AxyI	CCTNAGG	1 cut(s)	1419
BaeGI	GKGCMC	2 cut(s)	277, 1864
BamHI	GGATCC	1 cut(s)	185
BanII	GRGCYC	2 cut(s)	47, 1428
BbsI	GAAGAC	1 cut(s)	1627
Bbv12I	GWGCWC	2 cut(s)	1428, 1864
BbvI	GCAGC	9 cut(s)	43, 189, 500, 630, 761, 994, 1765, 1948, 2067
BccI	CCATC	2 cut(s)	761, 772
BceAI	ACGGC	3 cut(s)	127, 1874, 2052
BcgI	CGANNNNNNTGC	2 cut(s)	1592, 1626
BciT130I	CCWGG	3 cut(s)	293, 510, 665
BciVI	GTATCC	1 cut(s)	1905
BcnI	CCSGG	2 cut(s)	416, 605
BcoDI	GTCTC	2 cut(s)	56, 1083
BfaI	CTAG	6 cut(s)	371, 548, 857, 911, 942, 1931
BfmI	CTRYAG	2 cut(s)	1751, 1844
BfuI	GTATCC	1 cut(s)	1905
BglII	AGATCT	1 cut(s)	367
Bme1390I	CCNGG	5 cut(s)	293, 416, 510, 605, 665
Bme18I	GGWCC	4 cut(s)	253, 688, 884, 961
BmeRI	GACNNNNNGTC	1 cut(s)	259
BmeT110I	CYCGRG	1 cut(s)	344
BmgT120I	GGNCC	7 cut(s)	127, 253, 506, 569, 688, 884, 961
BmiI	GGNNCC	3 cut(s)	128, 187, 669
BmrFI	CCNGG	5 cut(s)	293, 416, 510, 605, 665
BmsI	GCATC	4 cut(s)	946, 1158, 1990, 2149
BpiI	GAAGAC	1 cut(s)	1627
BplI	GAGNNNNNCTC	2 cut(s)	338, 370
BpmI	CTGGAG	1 cut(s)	654
Bpu10I	CCTNAGC	1 cut(s)	978
Bpu14I	TTCGAA	1 cut(s)	1786
BpuMI	CCSGG	2 cut(s)	416, 605
BsaHI	GRCGYC	2 cut(s)	140, 1076
BsaI	GGTCTC	1 cut(s)	56
BsaJI	CCNNGG	8 cut(s)	122, 206, 291, 292, 603, 826, 1344, 1596
BsaWI	WCCGGW	1 cut(s)	1164
Bsc4I	CCNNNNNNNGG	2 cut(s)	182, 896
Bse1I	ACTGG	6 cut(s)	256, 578, 671, 1237, 1898, 1974
Bse21I	CCTNAGG	1 cut(s)	1419
Bse3DI	GCAATG	6 cut(s)	312, 408, 479, 968, 1508, 1778
BseBI	CCWGG	3 cut(s)	293, 510, 665
BseDI	CCNNGG	8 cut(s)	122, 206, 291, 292, 603, 826, 1344, 1596
BseGI	GGATG	4 cut(s)	400, 961, 1173, 1822
BseLI	CCNNNNNNNGG	2 cut(s)	182, 896
BseMI	GCAATG	6 cut(s)	312, 408, 479, 968, 1508, 1778
BseMII	CTCAG	7 cut(s)	96, 297, 347, 969, 1410, 1464, 2079
BseNI	ACTGG	6 cut(s)	256, 578, 671, 1237, 1898, 1974
BseRI	GAGGAG	4 cut(s)	346, 963, 1436, 2160
BseSI	GKGCMC	2 cut(s)	277, 1864
BseXI	GCAGC	9 cut(s)	43, 189, 500, 630, 761, 994, 1765, 1948, 2067
BseYI	CCCAGC	2 cut(s)	222, 902
BsgI	GTGCAG	1 cut(s)	1947
Bsh1236I	CGCG	3 cut(s)	41, 149, 208
BshFI	GGCC	6 cut(s)	73, 129, 311, 431, 508, 570
BsiHKAI	GWGCWC	2 cut(s)	1428, 1864
BsiHKCI	CYCGRG	1 cut(s)	344
BsiSI	CCGG	6 cut(s)	114, 176, 189, 416, 605, 1165
BsiWI	CGTACG	1 cut(s)	180
BslFI	GGGAC	1 cut(s)	309
BslI	CCNNNNNNNGG	2 cut(s)	182, 896
BsmAI	GTCTC	2 cut(s)	56, 1083
BsmBI	CGTCTC	1 cut(s)	1083
BsmFI	GGGAC	1 cut(s)	309
BsmI	GAATGC	4 cut(s)	17, 1465, 1730, 2003
BsnI	GGCC	6 cut(s)	73, 129, 311, 431, 508, 570
Bso31I	GGTCTC	1 cut(s)	56
BsoBI	CYCGRG	1 cut(s)	344
Bsp119I	TTCGAA	1 cut(s)	1786
Bsp1286I	GDGCHC	4 cut(s)	47, 277, 1428, 1864
Bsp143I	GATC	9 cut(s)	185, 351, 367, 698, 830, 1261, 1364, 1546, 2091
Bsp19I	CCATGG	1 cut(s)	122
Bsp68I	TCGCGA	1 cut(s)	149
BspANI	GGCC	6 cut(s)	73, 129, 311, 431, 508, 570
BspCNI	CTCAG	7 cut(s)	97, 298, 346, 970, 1411, 1463, 2080
BspFNI	CGCG	3 cut(s)	41, 149, 208
BspHI	TCATGA	1 cut(s)	1807
BspLI	GGNNCC	3 cut(s)	128, 187, 669
BspMAI	CTGCAG	1 cut(s)	1755
BspPI	GGATC	7 cut(s)	180, 193, 706, 838, 1256, 1372, 1541
BspT104I	TTCGAA	1 cut(s)	1786
BspTNI	GGTCTC	1 cut(s)	56
BsrBI	CCGCTC	2 cut(s)	63, 165
BsrDI	GCAATG	6 cut(s)	312, 408, 479, 968, 1508, 1778
BsrI	ACTGG	6 cut(s)	256, 578, 671, 1237, 1898, 1974
BssECI	CCNNGG	8 cut(s)	122, 206, 291, 292, 603, 826, 1344, 1596
BssMI	GATC	9 cut(s)	185, 351, 367, 698, 830, 1261, 1364, 1546, 2091
BssNAI	GTATAC	1 cut(s)	1065
BssNI	GRCGYC	2 cut(s)	140, 1076
BssT1I	CCWWGG	4 cut(s)	122, 826, 1344, 1596
Bst1107I	GTATAC	1 cut(s)	1065
Bst2UI	CCWGG	3 cut(s)	293, 510, 665
Bst6I	CTCTTC	2 cut(s)	381, 451
BstACI	GRCGYC	2 cut(s)	140, 1076
BstAPI	GCANNNNNTGC	1 cut(s)	2009
BstBI	TTCGAA	1 cut(s)	1786
BstC8I	GCNNGC	5 cut(s)	43, 95, 248, 486, 1463
BstDEI	CTNAG	9 cut(s)	105, 306, 333, 978, 1091, 1172, 1419, 1450, 2088
BstDSI	CCRYGG	2 cut(s)	122, 206
BstF5I	GGATG	4 cut(s)	400, 961, 1173, 1822
BstFNI	CGCG	3 cut(s)	41, 149, 208
BstHHI	GCGC	1 cut(s)	41
BstKTI	GATC	9 cut(s)	188, 354, 370, 701, 833, 1264, 1367, 1549, 2094
BstMAI	GTCTC	2 cut(s)	56, 1083
BstMBI	GATC	9 cut(s)	185, 351, 367, 698, 830, 1261, 1364, 1546, 2091
BstNI	CCWGG	3 cut(s)	293, 510, 665
BstNSI	RCATGY	1 cut(s)	1162
BstSCI	CCNGG	5 cut(s)	291, 414, 508, 603, 663
BstSFI	CTRYAG	2 cut(s)	1751, 1844
BstSLI	GKGCMC	2 cut(s)	277, 1864
BstUI	CGCG	3 cut(s)	41, 149, 208
BstV1I	GCAGC	9 cut(s)	43, 189, 500, 630, 761, 994, 1765, 1948, 2067
BstV2I	GAAGAC	1 cut(s)	1627
BstX2I	RGATCY	4 cut(s)	185, 367, 830, 1261
BstYI	RGATCY	4 cut(s)	185, 367, 830, 1261
BstZ17I	GTATAC	1 cut(s)	1065
Bsu36I	CCTNAGG	1 cut(s)	1419
BsuI	GTATCC	1 cut(s)	1905
BsuRI	GGCC	6 cut(s)	73, 129, 311, 431, 508, 570
BtgI	CCRYGG	2 cut(s)	122, 206
BtsCI	GGATG	4 cut(s)	400, 961, 1173, 1822
BtsI	GCAGTG	1 cut(s)	2007
BtsIMutI	CAGTG	9 cut(s)	263, 678, 1546, 1713, 1853, 1864, 1964, 1981, 2007
BtuMI	TCGCGA	1 cut(s)	149
Cac8I	GCNNGC	5 cut(s)	43, 95, 248, 486, 1463
CaiI	CAGNNNCTG	2 cut(s)	664, 1712
CciI	TCATGA	1 cut(s)	1807
CfoI	GCGC	1 cut(s)	41
Cfr13I	GGNCC	7 cut(s)	127, 253, 506, 569, 688, 884, 961
Cfr42I	CCGCGG	1 cut(s)	209
CpoI	CGGWCCG	1 cut(s)	961
CseI	GACGC	2 cut(s)	148, 1065
Csp6I	GTAC	4 cut(s)	181, 1117, 1162, 1199
CspCI	CAANNNNNGTGG	2 cut(s)	2152, 2187
CspI	CGGWCCG	1 cut(s)	961
CviAII	CATG	9 cut(s)	123, 264, 646, 732, 1159, 1361, 1522, 1808, 2069
CviQI	GTAC	4 cut(s)	181, 1117, 1162, 1199
DdeI	CTNAG	9 cut(s)	105, 306, 333, 978, 1091, 1172, 1419, 1450, 2088
DpnI	GATC	9 cut(s)	187, 353, 369, 700, 832, 1263, 1366, 1548, 2093
DpnII	GATC	9 cut(s)	185, 351, 367, 698, 830, 1261, 1364, 1546, 2091
DraIII	CACNNNGTG	1 cut(s)	2264
DriI	GACNNNNNGTC	1 cut(s)	259
EaeI	YGGCCR	1 cut(s)	429
Eam1104I	CTCTTC	2 cut(s)	381, 451
Eam1105I	GACNNNNNGTC	1 cut(s)	259
EarI	CTCTTC	2 cut(s)	381, 451
Ecl136II	GAGCTC	1 cut(s)	1426
Eco130I	CCWWGG	4 cut(s)	122, 826, 1344, 1596
Eco24I	GRGCYC	2 cut(s)	47, 1428
Eco31I	GGTCTC	1 cut(s)	56
Eco47I	GGWCC	4 cut(s)	253, 688, 884, 961
Eco53kI	GAGCTC	1 cut(s)	1426
Eco57I	CTGAAG	2 cut(s)	1103, 1572
Eco81I	CCTNAGG	1 cut(s)	1419
Eco88I	CYCGRG	1 cut(s)	344
EcoICRI	GAGCTC	1 cut(s)	1426
EcoO109I	RGGNCCY	2 cut(s)	127, 569
EcoRI	GAATTC	1 cut(s)	1223
EcoRII	CCWGG	3 cut(s)	291, 508, 663
EcoT14I	CCWWGG	4 cut(s)	122, 826, 1344, 1596
EcoT22I	ATGCAT	1 cut(s)	2005
EcoT38I	GRGCYC	2 cut(s)	47, 1428
ErhI	CCWWGG	4 cut(s)	122, 826, 1344, 1596
Esp3I	CGTCTC	1 cut(s)	1083
FaeI	CATG	9 cut(s)	126, 267, 649, 735, 1162, 1364, 1525, 1811, 2072
FaqI	GGGAC	1 cut(s)	309
FatI	CATG	9 cut(s)	122, 263, 645, 731, 1158, 1360, 1521, 1807, 2068
FauI	CCCGC	2 cut(s)	34, 36
FauNDI	CATATG	2 cut(s)	1183, 1315
FblI	GTMKAC	3 cut(s)	1038, 1064, 1177
FokI	GGATG	4 cut(s)	407, 968, 1180, 1809
FriOI	GRGCYC	2 cut(s)	47, 1428
FspBI	CTAG	6 cut(s)	371, 548, 857, 911, 942, 1931
GlaI	GCGC	1 cut(s)	40
GsaI	CCCAGC	2 cut(s)	226, 906
GsuI	CTGGAG	1 cut(s)	654
HaeIII	GGCC	6 cut(s)	73, 129, 311, 431, 508, 570
HapII	CCGG	6 cut(s)	114, 176, 189, 416, 605, 1165
HgaI	GACGC	2 cut(s)	148, 1065
HhaI	GCGC	1 cut(s)	41
Hin1I	GRCGYC	2 cut(s)	140, 1076
Hin1II	CATG	9 cut(s)	126, 267, 649, 735, 1162, 1364, 1525, 1811, 2072
Hin6I	GCGC	1 cut(s)	39
HinP1I	GCGC	1 cut(s)	39
HincII	GTYRAC	3 cut(s)	170, 1178, 2203
HindII	GTYRAC	3 cut(s)	170, 1178, 2203
HindIII	AAGCTT	1 cut(s)	1671
HinfI	GANTC	9 cut(s)	389, 864, 1139, 1301, 1489, 1509, 1648, 1836, 1954
HpaII	CCGG	6 cut(s)	114, 176, 189, 416, 605, 1165
HphI	GGTGA	6 cut(s)	17, 124, 320, 941, 1420, 1897
Hpy99I	CGWCG	1 cut(s)	1482
HpyAV	CCTTC	4 cut(s)	370, 915, 1610, 1808
HpyCH4IV	ACGT	2 cut(s)	56, 2199
HpyF3I	CTNAG	9 cut(s)	105, 306, 333, 978, 1091, 1172, 1419, 1450, 2088
HpySE526I	ACGT	2 cut(s)	56, 2199
Hsp92I	GRCGYC	2 cut(s)	140, 1076
Hsp92II	CATG	9 cut(s)	126, 267, 649, 735, 1162, 1364, 1525, 1811, 2072
HspAI	GCGC	1 cut(s)	39
KspI	CCGCGG	1 cut(s)	209
Kzo9I	GATC	9 cut(s)	185, 351, 367, 698, 830, 1261, 1364, 1546, 2091
LmnI	GCTCC	6 cut(s)	68, 673, 899, 1423, 1600, 1803
Lsp1109I	GCAGC	9 cut(s)	43, 189, 500, 630, 761, 994, 1765, 1948, 2067
LweI	GCATC	4 cut(s)	946, 1158, 1990, 2149
MaeI	CTAG	6 cut(s)	371, 548, 857, 911, 942, 1931
MaeII	ACGT	2 cut(s)	56, 2199
MaeIII	GTNAC	5 cut(s)	136, 654, 1051, 1247, 1708
MalI	GATC	9 cut(s)	187, 353, 369, 700, 832, 1263, 1366, 1548, 2093
MbiI	CCGCTC	2 cut(s)	63, 165
MboI	GATC	9 cut(s)	185, 351, 367, 698, 830, 1261, 1364, 1546, 2091
MboII	GAAGA	8 cut(s)	398, 438, 464, 650, 1632, 1823, 2022, 2261
MfeI	CAATTG	3 cut(s)	197, 627, 804
MflI	RGATCY	4 cut(s)	185, 367, 830, 1261
MhlI	GDGCHC	4 cut(s)	47, 277, 1428, 1864
MlyI	GAGTC	4 cut(s)	398, 873, 1518, 1963
MmeI	TCCRAC	1 cut(s)	372
Mph1103I	ATGCAT	1 cut(s)	2005
MroXI	GAANNNNTTC	2 cut(s)	1557, 1818
MseI	TTAA	3 cut(s)	1473, 1484, 2102
MslI	CAYNNNNRTG	1 cut(s)	1242
MspA1I	CMGCKG	1 cut(s)	208
MspI	CCGG	6 cut(s)	114, 176, 189, 416, 605, 1165
MspR9I	CCNGG	5 cut(s)	293, 416, 510, 605, 665
MunI	CAATTG	3 cut(s)	197, 627, 804
Mva1269I	GAATGC	4 cut(s)	17, 1465, 1730, 2003
MvaI	CCWGG	3 cut(s)	293, 510, 665
MvnI	CGCG	3 cut(s)	41, 149, 208
NciI	CCSGG	2 cut(s)	416, 605
NcoI	CCATGG	1 cut(s)	122
NdeI	CATATG	2 cut(s)	1183, 1315
NdeII	GATC	9 cut(s)	185, 351, 367, 698, 830, 1261, 1364, 1546, 2091
NlaIII	CATG	9 cut(s)	126, 267, 649, 735, 1162, 1364, 1525, 1811, 2072
NlaIV	GGNNCC	3 cut(s)	128, 187, 669
NmuCI	GTSAC	3 cut(s)	136, 1247, 1708
NruI	TCGCGA	1 cut(s)	149
NsiI	ATGCAT	1 cut(s)	2005
NspI	RCATGY	1 cut(s)	1162
NspV	TTCGAA	1 cut(s)	1786
PagI	TCATGA	1 cut(s)	1807
PasI	CCCWGGG	1 cut(s)	292
PciI	ACATGT	1 cut(s)	1158
PcsI	WCGNNNNNNNCGW	1 cut(s)	146
PctI	GAATGC	4 cut(s)	17, 1465, 1730, 2003
PdmI	GAANNNNTTC	2 cut(s)	1557, 1818
PfeI	GAWTC	5 cut(s)	1139, 1301, 1489, 1648, 1836
Pfl23II	CGTACG	1 cut(s)	180
PleI	GAGTC	4 cut(s)	397, 872, 1517, 1962
PpsI	GAGTC	4 cut(s)	397, 872, 1517, 1962
PscI	ACATGT	1 cut(s)	1158
PsiI	TTATAA	1 cut(s)	1677
Psp124BI	GAGCTC	1 cut(s)	1428
Psp6I	CCWGG	3 cut(s)	291, 508, 663
PspFI	CCCAGC	2 cut(s)	222, 902
PspGI	CCWGG	3 cut(s)	291, 508, 663
PspLI	CGTACG	1 cut(s)	180
PspN4I	GGNNCC	3 cut(s)	128, 187, 669
PspPI	GGNCC	7 cut(s)	127, 253, 506, 569, 688, 884, 961
PstI	CTGCAG	1 cut(s)	1755
PstNI	CAGNNNCTG	2 cut(s)	664, 1712
PsuI	RGATCY	4 cut(s)	185, 367, 830, 1261
RruI	TCGCGA	1 cut(s)	149
RsaI	GTAC	4 cut(s)	182, 1118, 1163, 1200
RsaNI	GTAC	4 cut(s)	181, 1117, 1162, 1199
RseI	CAYNNNNRTG	1 cut(s)	1242
Rsr2I	CGGWCCG	1 cut(s)	961
RsrII	CGGWCCG	1 cut(s)	961
SacI	GAGCTC	1 cut(s)	1428
SacII	CCGCGG	1 cut(s)	209
SalI	GTCGAC	1 cut(s)	1176
SaqAI	TTAA	3 cut(s)	1473, 1484, 2102
Sau3AI	GATC	9 cut(s)	185, 351, 367, 698, 830, 1261, 1364, 1546, 2091
Sau96I	GGNCC	7 cut(s)	127, 253, 506, 569, 688, 884, 961
SchI	GAGTC	4 cut(s)	398, 873, 1518, 1963
ScrFI	CCNGG	5 cut(s)	293, 416, 510, 605, 665
SduI	GDGCHC	4 cut(s)	47, 277, 1428, 1864
SfaNI	GCATC	4 cut(s)	946, 1158, 1990, 2149
SfcI	CTRYAG	2 cut(s)	1751, 1844
Sfr303I	CCGCGG	1 cut(s)	209
SfuI	TTCGAA	1 cut(s)	1786
SgrBI	CCGCGG	1 cut(s)	209
SinI	GGWCC	4 cut(s)	253, 688, 884, 961
SmiMI	CAYNNNNRTG	1 cut(s)	1242
SspMI	CTAG	6 cut(s)	371, 548, 857, 911, 942, 1931
SstI	GAGCTC	1 cut(s)	1428
StyD4I	CCNGG	5 cut(s)	291, 414, 508, 603, 663
StyI	CCWWGG	4 cut(s)	122, 826, 1344, 1596
TaiI	ACGT	2 cut(s)	59, 2202
TaqI	TCGA	4 cut(s)	319, 1177, 1786, 2187
TatI	WGTACW	2 cut(s)	1116, 1198
TauI	GCSGC	4 cut(s)	76, 208, 285, 431
TfiI	GAWTC	5 cut(s)	1139, 1301, 1489, 1648, 1836
Tru1I	TTAA	3 cut(s)	1473, 1484, 2102
Tru9I	TTAA	3 cut(s)	1473, 1484, 2102
TscAI	CASTG	9 cut(s)	263, 678, 1546, 1713, 1853, 1864, 1971, 1981, 2014
TseFI	GTSAC	3 cut(s)	136, 1247, 1708
TseI	GCWGC	9 cut(s)	31, 202, 488, 618, 749, 1007, 1753, 1961, 2080
Tsp45I	GTSAC	3 cut(s)	136, 1247, 1708
TspGWI	ACGGA	3 cut(s)	198, 1713, 2220
TspRI	CASTG	9 cut(s)	263, 678, 1546, 1713, 1853, 1864, 1971, 1981, 2014
VneI	GTGCAC	1 cut(s)	1860
VpaK11BI	GGWCC	4 cut(s)	253, 688, 884, 961
XapI	RAATTY	3 cut(s)	455, 1223, 1349
XbaI	TCTAGA	1 cut(s)	370
XceI	RCATGY	1 cut(s)	1162
XcmI	CCANNNNNNNNNTGG	2 cut(s)	729, 1438
XmiI	GTMKAC	3 cut(s)	1038, 1064, 1177
XmnI	GAANNNNTTC	2 cut(s)	1557, 1818
XspI	CTAG	6 cut(s)	371, 548, 857, 911, 942, 1931
Zsp2I	ATGCAT	1 cut(s)	2005

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.