RchiOBHm_Chr7g0233321

ATPase WRNIP1-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0009307
Physical Location & Seq
Forward (+)
57744195 .. 57746144
1950 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1626 bp
ATGGAAATGGAGCAGCTGTTAAGCATGGGCTTCCCCACCGACCTCGCCGCTGAAGCCCTCGCCGCCACCGGCGGCAACTCCGCTCTCAAAGCCACCGATTGGATTCTCAACCGCAATTCCTCCACCACCTCCACCTCCACTCCCACCGCCACCTCTCAACCCAAACTCGATCGCTTCTTCCTCTCCCAATCCACCCCCTCCTCAAATTCACAATCCCAAGACAAACAAGAACCAGAAGAACAACAGTCCACCCCAACCTCCCAACTCCCCAAGCGCCGCAAACTTCTCGTCCCGGAAACCCCGCCGCCCACTACCTCCGATAAACCCGCAACCGCCGCGGCCCACCACCAGCCCTTGTCGGAGCGCATGCGGCCCAGGACCCTAAACGACGTCGTCGGCCAGGACCACCTCCTCGCCCCAAACTCCCTCCTCCGCTCCGCTATCAAATGCGAGCGTCTCCCTTCTCTCGTCTTCTGGGGCCCACCCGGCACCGGCAAGACCTCCATCGCCAAAGCCATCATCAACTCCGCCTCCTCCGCCGCCTCCCGGCCCTACCGGTTCGTCTCGCTCTCCGCCGTCACCGCCGGCGTCAAAGACGTCAGGGAAGCCATCGACGAGGCCCGGAAGAGGAAGAAGCTGAACGGCCAGAGGACCGTTCTCTTCATCGACGAGGTTCACAGGTTCAACAAATCGCAGCAGGACTCTTTCTTGCCGGTGATCGAAGACGGCAGCATAGTCTTCATGGGCGCCACCACTGAGAACCCTTCGTTCCATTTGATCACGCCGCTCTTGTCTAGGTCTCGAGTTCTTGATCTTCGACCCTTGAGCCCACAATATATAGAGGTTCTTCTCCGGCGAGCGGCGGAAAACTCGGAAATCGGATTGTCTCGGAGTGTGGGGATGCAAGTAGATGTGGAGGAGGAAGTCATTCGTTTTATCTCCGCCAATTGCGACGGTGATGCTAGAGTGGCACTCAATGCATTGGAAATCTCAGCTACAACAGCAGCTGCCCGAGCCTCGACGCCGGATTCAGTAGCTGGTGTTACCGTGGAGGATGCCAAGGAAGCACTGCAATGCAAGCATGTGGCTTCGGACAAAGCAGGGGAAGAGCACTACAACCTCATCAGTGCGCTTCACAAGTCTATGAGAGGAAGTGATGCCAATGCTGCTATTTATTGGCTGGCAAGGATGCTTGAGGGAGGGCAGGAGCCTCTGTACATTGCGCGCCGGCTCGTAAGGTTTGCCAGCGAAGATGTGGGGCTGGCGGACCCATTGGCGCTTAATCAAGCTGTGGCTTGTTACCAAGCTTGTCACTTTATTGGAATGCCAGAGTGCAATGTGATTCTTGCACAGTGTGTGGCTTACTTGGCTTTGGCTCCAAAGTCGATTGCTGTTTATAAAGCAATGAATAGTGCAGCAGAAGTGGTGAGGAGTTCAGTTGGACAGAATGAGGGGGTGCCTCTTCATCTCAGGAATGCACCGACTAAGCTGATGAAGGATTTTGGGTATGGGAAAGGATATATATACACTCCTGACAATCCCTCTGCAGAACAGAGATTTCTACCGCCATCACTTGAAGGTTACAAGTTTCTGGATTGGCCAATCAGTAATAACACTGATGGATGA

Protein Analysis

541

Amino Acids

58.79

Weight (kDa)

6.58

Isoelectric Point (pI)

49.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
UBA_7 PF22562 3 - 38 3.1e-08 UBA-like domain
RuvB_N PF05496 123 - 246 6.6e-10 Holliday junction DNA helicase RuvB P-loop domain
AAA PF00004 157 - 268 2.5e-17 ATPase family associated with various cellular activities (AAA)
AAA_assoc_2 PF16193 302 - 383 2.8e-24 AAA C-terminal domain
MgsA_C PF12002 384 - 530 2.9e-56 MgsA AAA+ ATPase C terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1398
AatII GACGTC 2 cut(s) 393, 600
AccB1I GGYRCC 3 cut(s) 488, 746, 1456
AccB7I CCANNNNNTGG 1 cut(s) 99
AccBSI CCGCTC 4 cut(s) 83, 435, 787, 860
AccII CGCG 2 cut(s) 338, 1225
AcoI YGGCCR 3 cut(s) 397, 643, 1598
AcsI RAATTY 1 cut(s) 205
AcuI CTGAAG 1 cut(s) 72
AcyI GRCGYC 5 cut(s) 390, 588, 597, 747, 1022
AdeI CACNNNGTG 1 cut(s) 1355
AfaI GTAC 1 cut(s) 1217
AfiI CCNNNNNNNGG 5 cut(s) 99, 491, 546, 627, 859
AgeI ACCGGT 1 cut(s) 555
AgsI TTSAA 2 cut(s) 685, 1577
AjnI CCWGG 2 cut(s) 374, 399
AluBI AGCT 8 cut(s) 16, 637, 995, 1007, 1037, 1289, 1307, 1489
AluI AGCT 8 cut(s) 16, 637, 995, 1007, 1037, 1289, 1307, 1489
Alw21I GWGCWC 1 cut(s) 1113
Alw26I GTCTC 4 cut(s) 461, 568, 804, 891
AlwNI CAGNNNCTG 2 cut(s) 1007, 1037
Ama87I CYCGRG 2 cut(s) 801, 1011
AoxI GGCC 8 cut(s) 339, 371, 397, 478, 548, 618, 643, 1598
ApaI GGGCCC 1 cut(s) 482
ApeKI GCWGC 7 cut(s) 13, 694, 729, 1004, 1007, 1166, 1415
ApoI RAATTY 1 cut(s) 205
ArsI GACNNNNNNTTYG 2 cut(s) 273, 305
AsiGI ACCGGT 1 cut(s) 555
Asp700I GAANNNNTTC 1 cut(s) 927
AspLEI GCGC 7 cut(s) 276, 366, 749, 1132, 1225, 1227, 1279
AsuC2I CCSGG 4 cut(s) 293, 486, 547, 622
AsuHPI GGTGA 4 cut(s) 571, 727, 968, 1438
AvaI CYCGRG 2 cut(s) 801, 1011
AvaII GGWCC 4 cut(s) 378, 403, 651, 1267
BaeGI GKGCMC 1 cut(s) 482
BalI TGGCCA 1 cut(s) 1600
BanI GGYRCC 3 cut(s) 488, 746, 1456
BanII GRGCYC 2 cut(s) 482, 830
BbsI GAAGAC 3 cut(s) 463, 729, 730
Bbv12I GWGCWC 1 cut(s) 1113
BbvI GCAGC 7 cut(s) 25, 706, 741, 994, 1016, 1153, 1427
BccI CCATC 5 cut(s) 512, 524, 617, 1576, 1613
BceAI ACGGC 3 cut(s) 560, 658, 742
BcgI CGANNNNNNTGC 4 cut(s) 268, 302, 941, 975
BciT130I CCWGG 2 cut(s) 376, 401
BclI TGATCA 1 cut(s) 777
BcnI CCSGG 4 cut(s) 293, 486, 547, 622
BcoDI GTCTC 4 cut(s) 461, 568, 804, 891
BfaI CTAG 2 cut(s) 795, 963
BfmI CTRYAG 1 cut(s) 1545
BfoI RGCGCY 3 cut(s) 277, 750, 1280
BglI GCCNNNNNGGC 1 cut(s) 486
Bme1390I CCNGG 6 cut(s) 293, 376, 401, 486, 547, 622
Bme18I GGWCC 4 cut(s) 378, 403, 651, 1267
BmeT110I CYCGRG 2 cut(s) 801, 1011
BmiI GGNNCC 9 cut(s) 380, 479, 480, 490, 748, 1209, 1269, 1377, 1458
BmrFI CCNGG 6 cut(s) 293, 376, 401, 486, 547, 622
BmsI GCATC 5 cut(s) 891, 949, 1045, 1147, 1179
BpiI GAAGAC 3 cut(s) 463, 729, 730
BplI GAGNNNNNCTC 2 cut(s) 957, 989
BpuEI CTTGAG 2 cut(s) 844, 1214
BpuMI CCSGG 4 cut(s) 293, 486, 547, 622
BsaHI GRCGYC 5 cut(s) 390, 588, 597, 747, 1022
BsaI GGTCTC 1 cut(s) 804
BsaJI CCNNGG 4 cut(s) 336, 374, 1047, 1059
BsaWI WCCGGW 1 cut(s) 555
BsaXI ACNNNNNCTCC 7 cut(s) 32, 124, 154, 515, 545, 1199, 1229
Bsc4I CCNNNNNNNGG 5 cut(s) 99, 491, 546, 627, 859
Bse118I RCCGGY 6 cut(s) 68, 491, 555, 584, 712, 1227
Bse3DI GCAATG 4 cut(s) 1079, 1218, 1342, 1410
BseBI CCWGG 2 cut(s) 376, 401
BseDI CCNNGG 4 cut(s) 336, 374, 1047, 1059
BseGI GGATG 3 cut(s) 906, 1060, 1194
BseLI CCNNNNNNNGG 5 cut(s) 99, 491, 546, 627, 859
BseMI GCAATG 4 cut(s) 1079, 1218, 1342, 1410
BseMII CTCAG 3 cut(s) 747, 1005, 1483
BsePI GCGCGC 1 cut(s) 1223
BseRI GAGGAG 6 cut(s) 190, 401, 419, 523, 932, 1444
BseSI GKGCMC 1 cut(s) 482
BseXI GCAGC 7 cut(s) 25, 706, 741, 994, 1016, 1153, 1427
BsgI GTGCAG 1 cut(s) 1434
Bsh1236I CGCG 2 cut(s) 338, 1225
Bsh1285I CGRYCG 1 cut(s) 172
BshFI GGCC 8 cut(s) 341, 373, 399, 480, 550, 620, 645, 1600
BshNI GGYRCC 3 cut(s) 488, 746, 1456
BshTI ACCGGT 1 cut(s) 555
BsiEI CGRYCG 1 cut(s) 172
BsiHKAI GWGCWC 1 cut(s) 1113
BsiHKCI CYCGRG 2 cut(s) 801, 1011
BslFI GGGAC 1 cut(s) 275
BslI CCNNNNNNNGG 5 cut(s) 99, 491, 546, 627, 859
BsmAI GTCTC 4 cut(s) 461, 568, 804, 891
BsmBI CGTCTC 2 cut(s) 461, 568
BsmFI GGGAC 1 cut(s) 275
BsmI GAATGC 2 cut(s) 1329, 1480
BsnI GGCC 8 cut(s) 341, 373, 399, 480, 550, 620, 645, 1600
Bso31I GGTCTC 1 cut(s) 804
BsoBI CYCGRG 2 cut(s) 801, 1011
Bsp120I GGGCCC 1 cut(s) 478
Bsp1286I GDGCHC 3 cut(s) 482, 830, 1113
Bsp1407I TGTACA 1 cut(s) 1215
Bsp143I GATC 4 cut(s) 169, 717, 777, 811
BspANI GGCC 8 cut(s) 341, 373, 399, 480, 550, 620, 645, 1600
BspCNI CTCAG 3 cut(s) 748, 1004, 1482
BspFNI CGCG 2 cut(s) 338, 1225
BspLI GGNNCC 9 cut(s) 380, 479, 480, 490, 748, 1209, 1269, 1377, 1458
BspMAI CTGCAG 1 cut(s) 1549
BspQI GCTCTTC 1 cut(s) 1101
BspT107I GGYRCC 3 cut(s) 488, 746, 1456
BspTNI GGTCTC 1 cut(s) 804
BsrBI CCGCTC 4 cut(s) 83, 435, 787, 860
BsrDI GCAATG 4 cut(s) 1079, 1218, 1342, 1410
BsrFI RCCGGY 6 cut(s) 68, 491, 555, 584, 712, 1227
BsrGI TGTACA 1 cut(s) 1215
BssAI RCCGGY 6 cut(s) 68, 491, 555, 584, 712, 1227
BssECI CCNNGG 4 cut(s) 336, 374, 1047, 1059
BssHII GCGCGC 1 cut(s) 1223
BssMI GATC 4 cut(s) 169, 717, 777, 811
BssNI GRCGYC 5 cut(s) 390, 588, 597, 747, 1022
BssT1I CCWWGG 1 cut(s) 1059
Bst2UI CCWGG 2 cut(s) 376, 401
Bst4CI ACNGT 5 cut(s) 246, 655, 956, 1048, 1353
Bst6I CTCTTC 4 cut(s) 620, 665, 1101, 1467
BstACI GRCGYC 5 cut(s) 390, 588, 597, 747, 1022
BstAPI GCANNNNNTGC 1 cut(s) 977
BstAUI TGTACA 1 cut(s) 1215
BstDEI CTNAG 4 cut(s) 756, 991, 1469, 1485
BstDSI CCRYGG 2 cut(s) 336, 1047
BstF5I GGATG 3 cut(s) 906, 1060, 1194
BstFNI CGCG 2 cut(s) 338, 1225
BstH2I RGCGCY 3 cut(s) 277, 750, 1280
BstHHI GCGC 7 cut(s) 276, 366, 749, 1132, 1225, 1227, 1279
BstKTI GATC 4 cut(s) 172, 720, 780, 814
BstMAI GTCTC 4 cut(s) 461, 568, 804, 891
BstMBI GATC 4 cut(s) 169, 717, 777, 811
BstMCI CGRYCG 1 cut(s) 172
BstNI CCWGG 2 cut(s) 376, 401
BstNSI RCATGY 2 cut(s) 370, 1085
BstSCI CCNGG 6 cut(s) 291, 374, 399, 484, 545, 620
BstSFI CTRYAG 1 cut(s) 1545
BstSLI GKGCMC 1 cut(s) 482
BstUI CGCG 2 cut(s) 338, 1225
BstV1I GCAGC 7 cut(s) 25, 706, 741, 994, 1016, 1153, 1427
BstV2I GAAGAC 3 cut(s) 463, 729, 730
BsuRI GGCC 8 cut(s) 341, 373, 399, 480, 550, 620, 645, 1600
BtgI CCRYGG 2 cut(s) 336, 1047
BtgZI GCGATG 1 cut(s) 490
BtsCI GGATG 3 cut(s) 906, 1060, 1194
BtsI GCAGTG 1 cut(s) 1067
BtsIMutI CAGTG 5 cut(s) 753, 1067, 1132, 1358, 1614
CaiI CAGNNNCTG 2 cut(s) 1007, 1037
CfoI GCGC 7 cut(s) 276, 366, 749, 1132, 1225, 1227, 1279
Cfr10I RCCGGY 6 cut(s) 68, 491, 555, 584, 712, 1227
Cfr42I CCGCGG 1 cut(s) 339
CseI GACGC 3 cut(s) 443, 577, 1030
Csp6I GTAC 1 cut(s) 1216
CspAI ACCGGT 1 cut(s) 555
CviAII CATG 4 cut(s) 25, 367, 742, 1082
CviQI GTAC 1 cut(s) 1216
DdeI CTNAG 4 cut(s) 756, 991, 1469, 1485
DinI GGCGCC 1 cut(s) 748
DpnI GATC 4 cut(s) 171, 719, 779, 813
DpnII GATC 4 cut(s) 169, 717, 777, 811
DraIII CACNNNGTG 1 cut(s) 1355
EaeI YGGCCR 3 cut(s) 397, 643, 1598
Eam1104I CTCTTC 4 cut(s) 620, 665, 1101, 1467
EarI CTCTTC 4 cut(s) 620, 665, 1101, 1467
EciI GGCGGA 6 cut(s) 517, 526, 562, 878, 931, 1280
Eco130I CCWWGG 1 cut(s) 1059
Eco24I GRGCYC 2 cut(s) 482, 830
Eco31I GGTCTC 1 cut(s) 804
Eco47I GGWCC 4 cut(s) 378, 403, 651, 1267
Eco57I CTGAAG 1 cut(s) 72
Eco88I CYCGRG 2 cut(s) 801, 1011
EcoO109I RGGNCCY 2 cut(s) 378, 478
EcoRII CCWGG 2 cut(s) 374, 399
EcoT14I CCWWGG 1 cut(s) 1059
EcoT22I ATGCAT 1 cut(s) 982
EcoT38I GRGCYC 2 cut(s) 482, 830
EgeI GGCGCC 1 cut(s) 748
EheI GGCGCC 1 cut(s) 748
ErhI CCWWGG 1 cut(s) 1059
Esp3I CGTCTC 2 cut(s) 461, 568
FaeI CATG 4 cut(s) 28, 370, 745, 1085
FaqI GGGAC 1 cut(s) 275
FatI CATG 4 cut(s) 24, 366, 741, 1081
FauI CCCGC 2 cut(s) 309, 334
FbaI TGATCA 1 cut(s) 777
FokI GGATG 3 cut(s) 913, 1067, 1201
FriOI GRGCYC 2 cut(s) 482, 830
FspBI CTAG 2 cut(s) 795, 963
GlaI GCGC 7 cut(s) 275, 365, 748, 1131, 1224, 1226, 1278
HaeII RGCGCY 3 cut(s) 277, 750, 1280
HaeIII GGCC 8 cut(s) 341, 373, 399, 480, 550, 620, 645, 1600
HgaI GACGC 3 cut(s) 443, 577, 1030
HhaI GCGC 7 cut(s) 276, 366, 749, 1132, 1225, 1227, 1279
Hin1I GRCGYC 5 cut(s) 390, 588, 597, 747, 1022
Hin1II CATG 4 cut(s) 28, 370, 745, 1085
Hin6I GCGC 7 cut(s) 274, 364, 747, 1130, 1223, 1225, 1277
HinP1I GCGC 7 cut(s) 274, 364, 747, 1130, 1223, 1225, 1277
HindIII AAGCTT 1 cut(s) 1305
HinfI GANTC 4 cut(s) 103, 701, 1028, 1342
HphI GGTGA 4 cut(s) 571, 727, 968, 1438
Hpy166II GTNNAC 2 cut(s) 249, 676
Hpy188I TCNGA 6 cut(s) 319, 361, 874, 881, 891, 1093
Hpy188III TCNNGA 5 cut(s) 801, 809, 1471, 1532, 1592
Hpy8I GTNNAC 2 cut(s) 249, 676
Hpy99I CGWCG 7 cut(s) 392, 395, 398, 617, 671, 956, 1024
HpyAV CCTTC 4 cut(s) 471, 774, 1489, 1571
HpyCH4III ACNGT 5 cut(s) 246, 655, 956, 1048, 1353
HpyCH4IV ACGT 2 cut(s) 390, 597
HpyCH4V TGCA 9 cut(s) 904, 980, 1072, 1077, 1335, 1349, 1415, 1478, 1547
HpyF3I CTNAG 4 cut(s) 756, 991, 1469, 1485
HpySE526I ACGT 2 cut(s) 390, 597
Hsp92I GRCGYC 5 cut(s) 390, 588, 597, 747, 1022
Hsp92II CATG 4 cut(s) 28, 370, 745, 1085
HspAI GCGC 7 cut(s) 274, 364, 747, 1130, 1223, 1225, 1277
KasI GGCGCC 1 cut(s) 746
KroI GCCGGC 2 cut(s) 584, 1227
KroNI GCCGGC 2 cut(s) 586, 1229
Ksp22I TGATCA 1 cut(s) 777
KspI CCGCGG 1 cut(s) 339
Kzo9I GATC 4 cut(s) 169, 717, 777, 811
LguI GCTCTTC 1 cut(s) 1101
LmnI GCTCC 5 cut(s) 10, 361, 440, 1207, 1381
Lsp1109I GCAGC 7 cut(s) 25, 706, 741, 994, 1016, 1153, 1427
LweI GCATC 5 cut(s) 891, 949, 1045, 1147, 1179
MaeI CTAG 2 cut(s) 795, 963
MaeII ACGT 2 cut(s) 390, 597
MaeIII GTNAC 5 cut(s) 577, 1042, 1298, 1310, 1580
MalI GATC 4 cut(s) 171, 719, 779, 813
MbiI CCGCTC 4 cut(s) 83, 435, 787, 860
MboI GATC 4 cut(s) 169, 717, 777, 811
MfeI CAATTG 1 cut(s) 946
MhlI GDGCHC 3 cut(s) 482, 830, 1113
MlsI TGGCCA 1 cut(s) 1600
MluCI AATT 3 cut(s) 115, 205, 946
MluNI TGGCCA 1 cut(s) 1600
Mly113I GGCGCC 1 cut(s) 747
MlyI GAGTC 1 cut(s) 695
MmeI TCCRAC 2 cut(s) 339, 1420
Mox20I TGGCCA 1 cut(s) 1600
Mph1103I ATGCAT 1 cut(s) 982
MreI CGCCGGCG 1 cut(s) 584
MroNI GCCGGC 2 cut(s) 584, 1227
MroXI GAANNNNTTC 1 cut(s) 927
MscI TGGCCA 1 cut(s) 1600
MseI TTAA 2 cut(s) 20, 1281
MslI CAYNNNNRTG 1 cut(s) 1072
Msp20I TGGCCA 1 cut(s) 1600
MspA1I CMGCKG 4 cut(s) 16, 50, 338, 1007
MspR9I CCNGG 6 cut(s) 293, 376, 401, 486, 547, 622
MunI CAATTG 1 cut(s) 946
Mva1269I GAATGC 2 cut(s) 1329, 1480
MvaI CCWGG 2 cut(s) 376, 401
MvnI CGCG 2 cut(s) 338, 1225
NaeI GCCGGC 2 cut(s) 586, 1229
NarI GGCGCC 1 cut(s) 747
NciI CCSGG 4 cut(s) 293, 486, 547, 622
NdeII GATC 4 cut(s) 169, 717, 777, 811
NgoMIV GCCGGC 2 cut(s) 584, 1227
NlaIII CATG 4 cut(s) 28, 370, 745, 1085
NlaIV GGNNCC 9 cut(s) 380, 479, 480, 490, 748, 1209, 1269, 1377, 1458
NmuCI GTSAC 2 cut(s) 577, 1310
NsiI ATGCAT 1 cut(s) 982
NspI RCATGY 2 cut(s) 370, 1085
PaeI GCATGC 1 cut(s) 370
PaeR7I CTCGAG 1 cut(s) 801
PauI GCGCGC 1 cut(s) 1223
PciSI GCTCTTC 1 cut(s) 1101
PctI GAATGC 2 cut(s) 1329, 1480
PdiI GCCGGC 2 cut(s) 586, 1229
PdmI GAANNNNTTC 1 cut(s) 927
PfeI GAWTC 3 cut(s) 103, 1028, 1342
PflFI GACNNNGTC 1 cut(s) 392
PflMI CCANNNNNTGG 1 cut(s) 99
PfoI TCCNGGA 1 cut(s) 291
PinAI ACCGGT 1 cut(s) 555
Ple19I CGATCG 1 cut(s) 172
PleI GAGTC 1 cut(s) 695
PluTI GGCGCC 1 cut(s) 750
PpsI GAGTC 1 cut(s) 695
PpuMI RGGWCCY 1 cut(s) 378
PsiI TTATAA 1 cut(s) 1398
Psp5II RGGWCCY 1 cut(s) 378
Psp6I CCWGG 2 cut(s) 374, 399
PspGI CCWGG 2 cut(s) 374, 399
PspN4I GGNNCC 9 cut(s) 380, 479, 480, 490, 748, 1209, 1269, 1377, 1458
PspOMI GGGCCC 1 cut(s) 478
PspPPI RGGWCCY 1 cut(s) 378
PstI CTGCAG 1 cut(s) 1549
PstNI CAGNNNCTG 2 cut(s) 1007, 1037
PsyI GACNNNGTC 1 cut(s) 392
PteI GCGCGC 1 cut(s) 1223
PvuI CGATCG 1 cut(s) 172
PvuII CAGCTG 2 cut(s) 16, 1007
RsaI GTAC 1 cut(s) 1217
RsaNI GTAC 1 cut(s) 1216
RseI CAYNNNNRTG 1 cut(s) 1072
SacII CCGCGG 1 cut(s) 339
SapI GCTCTTC 1 cut(s) 1101
SaqAI TTAA 2 cut(s) 20, 1281
Sau3AI GATC 4 cut(s) 169, 717, 777, 811
SchI GAGTC 1 cut(s) 695
ScrFI CCNGG 6 cut(s) 293, 376, 401, 486, 547, 622
SduI GDGCHC 3 cut(s) 482, 830, 1113
SfaNI GCATC 5 cut(s) 891, 949, 1045, 1147, 1179
SfcI CTRYAG 1 cut(s) 1545
SfoI GGCGCC 1 cut(s) 748
Sfr274I CTCGAG 1 cut(s) 801
Sfr303I CCGCGG 1 cut(s) 339
SgrAI CRCCGGYG 2 cut(s) 68, 584
SgrBI CCGCGG 1 cut(s) 339
SinI GGWCC 4 cut(s) 378, 403, 651, 1267
SlaI CTCGAG 1 cut(s) 801
SmiMI CAYNNNNRTG 1 cut(s) 1072
SmlI CTYRAG 3 cut(s) 801, 823, 1193
SmoI CTYRAG 3 cut(s) 801, 823, 1193
SphI GCATGC 1 cut(s) 370
Sse9I AATT 3 cut(s) 115, 205, 946
SspDI GGCGCC 1 cut(s) 746
SspMI CTAG 2 cut(s) 795, 963
StyD4I CCNGG 6 cut(s) 291, 374, 399, 484, 545, 620
StyI CCWWGG 1 cut(s) 1059
TaaI ACNGT 5 cut(s) 246, 655, 956, 1048, 1353
TaiI ACGT 2 cut(s) 393, 600
TaqI TCGA 8 cut(s) 168, 612, 666, 720, 802, 817, 1019, 1385
TasI AATT 3 cut(s) 115, 205, 946
TatI WGTACW 1 cut(s) 1215
TfiI GAWTC 3 cut(s) 103, 1028, 1342
Tru1I TTAA 2 cut(s) 20, 1281
Tru9I TTAA 2 cut(s) 20, 1281
TscAI CASTG 5 cut(s) 760, 1074, 1132, 1358, 1621
TseFI GTSAC 2 cut(s) 577, 1310
TseI GCWGC 7 cut(s) 13, 694, 729, 1004, 1007, 1166, 1415
Tsp45I GTSAC 2 cut(s) 577, 1310
TspDTI ATGAA 5 cut(s) 652, 730, 1421, 1454, 1508
TspRI CASTG 5 cut(s) 760, 1074, 1132, 1358, 1621
Tth111I GACNNNGTC 1 cut(s) 392
Van91I CCANNNNNTGG 1 cut(s) 99
VpaK11BI GGWCC 4 cut(s) 378, 403, 651, 1267
XapI RAATTY 1 cut(s) 205
XceI RCATGY 2 cut(s) 370, 1085
XcmI CCANNNNNNNNNTGG 1 cut(s) 1252
XhoI CTCGAG 1 cut(s) 801
XmnI GAANNNNTTC 1 cut(s) 927
XspI CTAG 2 cut(s) 795, 963
ZraI GACGTC 2 cut(s) 391, 598
Zsp2I ATGCAT 1 cut(s) 982
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.