RchiOBHm_Chr6g0292511

Exopolygalacturonase-like

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
6
OG0011526
Physical Location & Seq
Reverse (-)
55365846 .. 55367780
1935 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1935 bp
ATGTTGGTGGCTGGATTTCTAAAAGGATTGGGAATTTATACTCTTGTTCATTCCTATAAATACACAAACATCCTACAAGCAGCTAGCAAGAGTACTTCATACCAGAGTCTTGCAATCTTATTCCGCATCCTCATCATGGTTCTGAAATCGATGAACATTTTGGCAATACTTTTGCTCTCATTTTTAGCATCCACCGCTGTAGCTGATCAATCCAATGTCTTCGATGTGACAAGCTCAAAATATGGTGGAAAGCCCAACTCGGATATTTCAAAGGCATTGACAATGGCATGGACAGATGCGTGTGCATCAACGTCAACGAGTACTGTCCTTGTTCCGAGGGGAACATGCAAGTTATTACAAGCAAAATTTGAAGGTCCTTGCAAGGCTCCTATTCAGTTTCAGCTCCAAGGAACATTGCAGGCTCCGAAAGACCGGAGCCAACTCGATGACTTTTGGATTTCCTTTAACAACATCGACATGCTCACCTTGTCCGGCGGTGGAACTATCGACGGACAAGGAGCCCTTTCTTGGAAGGAGAATCATGACTCTACTCCCGTTGATATTTGGTTCCAAACTGTCAACAATTCCACAATTAGCGACATAGCTTCGATCGACAGCGCAAAGTTCCACATTAGTGTTCATGGCTGCAACAACGTTACGTTCCAACGGCTCACCATCACAGCACCCGAAGACAGTCCTAACACCGACGGAATCCACATCTCTAGTTCGACCAAGATCACAGTCTCCGACTCCTACATTGCAACCGGTGACGATTGTGTTTCAATTGGCGATGGCTCCAACCAAATCCTAGTGTCCAACATTACTTGCGGACCAGGTCATGGAATAAGCATAGGCAGTCTAGGAAAGTATCCAGACGAACAGCCGGTGGTCGGCGTCACGGTCAAGAACTGCACGCTTACCGGCACAAGCAACGGCGCGAGAATCAAGACGTGGCCCGATTCTCCGGCAACAAGCGTTGCTTGTAATATACTCTTCCAAGACATGGTCATGGTGAATGTGAAGAACCCTGTCCTCATCGACCAGAACTACTGTGACAAAGGCAAGTCGTGTAAGCAAATAATTCCATCCAAAGTCCAGATCAGTAACGTGACGTTCAAGGATATCAGGGGCTCGTCTTCGTCTCCGGTTGCCGTCAAGCTCGACTGTAGTCACAGCGCGCCGTGCCAGAATGTGGAGCTGTCCGATATTGATCTCACGTACAGTGGAGACAAAAAAGACGAAATCACGTCCGAGTGTAATAATGTCAAACCGAGAATTACCGGCATGACTAGGGCTCTTGCTTGTGCCAATCTAGGTGACATACCAATAGATAATTCACCGCCGCCGTCAACTTCACCGCCTCTTCCACCGCCGCTGCCGGCTTCACCTCCTCTTCCACCATTTTCGCCTCCTCTTTCACCGCCGGCGCCATTTGTTTTACCTTCTCAACCACCATCTTCACCTCCTCTTTCGCCGCCGGAGCCATTTATTTCACCTTCACCGCTACCATCTGTACCTCCTCTTTTGCCGCCGCCATTCGTTTTACCTTCTCCGCCACCATCTTCACTGCCTCTTTCGCCGCCGGCGCCATTTGTTTTACCTCCACCGCCACCATCTTTACCTCTTCTTTTGCCGCCTCCATTAGTTTCACCTTCTCCTCCACCATTTTTACTGCCTCTTTCGCCGCCACCATTCGTATCACCTCCTCTTCCGCCGATGGTGGACACACCTCCTCCCCCTACGGTAGCATCAGACGATTCGTCTCCGCCGATAATAATGGTGTATGGGTATCCATATCCTCTGTCTCATACTGATGATGGTGGTTTTGGACCAACATCGTCCGCCGCCGGCAGTATTTTGGGGCAAAAACCGACGGTCAAAGTGATGGTGCTTAGTTCCGCCCTGGCTTTGTGGTTGCTGCACGCCTTGTTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005576 GO:0005618 GO:0005623 GO:0030312 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
ko00040 ko01100 map00040 map01100
Pfam Domains
Protein Families
Glyco_hydro_28

Protein Analysis

644

Amino Acids

67.87

Weight (kDa)

5.58

Isoelectric Point (pI)

63.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_28 PF00295 101 - 423 7.1e-99 Glycosyl hydrolases family 28
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 1426, 1585
AccB7I CCANNNNNTGG 3 cut(s) 839, 1003, 1192
AccII CGCG 2 cut(s) 938, 1178
AclI AACGTT 1 cut(s) 654
AcsI RAATTY 2 cut(s) 33, 365
AcyI GRCGYC 3 cut(s) 894, 1427, 1586
AfaI GTAC 4 cut(s) 94, 322, 1220, 1515
AfiI CCNNNNNNNGG 6 cut(s) 136, 528, 839, 890, 1003, 1192
AgeI ACCGGT 1 cut(s) 764
AgsI TTSAA 4 cut(s) 270, 371, 783, 1117
AhdI GACNNNNNGTC 1 cut(s) 1759
AjiI CACGTC 2 cut(s) 951, 1248
AjnI CCWGG 2 cut(s) 832, 1902
AjuI GAANNNNNNNTTGG 2 cut(s) 1318, 1350
AleI CACNNNNGTG 1 cut(s) 633
AluBI AGCT 7 cut(s) 83, 203, 234, 403, 605, 1159, 1198
AluI AGCT 7 cut(s) 83, 203, 234, 403, 605, 1159, 1198
Alw26I GTCTC 5 cut(s) 748, 1146, 1221, 1767, 1809
AoxI GGCC 1 cut(s) 953
ApeKI GCWGC 4 cut(s) 80, 645, 1375, 1918
ApoI RAATTY 2 cut(s) 33, 365
AsiGI ACCGGT 1 cut(s) 764
AspLEI GCGC 6 cut(s) 620, 938, 1178, 1180, 1429, 1588
AspS9I GGNCC 4 cut(s) 374, 830, 954, 1829
AsuNHI GCTAGC 1 cut(s) 83
AvaII GGWCC 3 cut(s) 374, 830, 1829
BanI GGYRCC 2 cut(s) 1426, 1585
BanII GRGCYC 3 cut(s) 523, 1133, 1297
BbsI GAAGAC 3 cut(s) 211, 696, 1128
BbvI GCAGC 4 cut(s) 92, 632, 1362, 1905
BceAI ACGGC 5 cut(s) 683, 949, 1136, 1165, 1330
BciT130I CCWGG 2 cut(s) 834, 1904
BciVI GTATCC 2 cut(s) 879, 1800
BclI TGATCA 1 cut(s) 205
BcoDI GTCTC 5 cut(s) 748, 1146, 1221, 1767, 1809
BfaI CTAG 6 cut(s) 84, 723, 809, 860, 1290, 1313
BfmI CTRYAG 2 cut(s) 198, 1165
BfoI RGCGCY 2 cut(s) 1430, 1589
BfuI GTATCC 2 cut(s) 879, 1800
BmcAI AGTACT 2 cut(s) 94, 322
Bme1390I CCNGG 2 cut(s) 834, 1904
Bme18I GGWCC 3 cut(s) 374, 830, 1829
BmeRI GACNNNNNGTC 1 cut(s) 1759
BmgBI CACGTC 2 cut(s) 951, 1248
BmgT120I GGNCC 4 cut(s) 374, 830, 954, 1829
BmiI GGNNCC 9 cut(s) 387, 423, 437, 520, 569, 796, 1428, 1482, 1587
BmrFI CCNGG 2 cut(s) 834, 1904
BmsI GCATC 5 cut(s) 135, 197, 286, 314, 1757
BmtI GCTAGC 1 cut(s) 87
BoxI GACNNNNGTC 1 cut(s) 1167
BpiI GAAGAC 3 cut(s) 211, 696, 1128
Bsa29I ATCGAT 1 cut(s) 149
BsaAI YACGTR 1 cut(s) 1218
BsaBI GATNNNNATC 1 cut(s) 1209
BsaHI GRCGYC 3 cut(s) 894, 1427, 1586
BsaJI CCNNGG 3 cut(s) 335, 406, 1902
BsaWI WCCGGW 3 cut(s) 432, 764, 1144
BsaXI ACNNNNNCTCC 2 cut(s) 1717, 1747
Bsc4I CCNNNNNNNGG 6 cut(s) 136, 528, 839, 890, 1003, 1192
Bse118I RCCGGY 8 cut(s) 764, 883, 920, 1280, 1378, 1423, 1582, 1847
Bse3DI GCAATG 2 cut(s) 413, 756
Bse8I GATNNNNATC 1 cut(s) 1209
BseBI CCWGG 2 cut(s) 834, 1904
BseCI ATCGAT 1 cut(s) 149
BseDI CCNNGG 3 cut(s) 335, 406, 1902
BseGI GGATG 4 cut(s) 69, 126, 188, 1085
BseJI GATNNNNATC 1 cut(s) 1209
BseLI CCNNNNNNNGG 6 cut(s) 136, 528, 839, 890, 1003, 1192
BseMI GCAATG 2 cut(s) 413, 756
BsePI GCGCGC 1 cut(s) 1176
BseRI GAGGAG 7 cut(s) 1380, 1401, 1455, 1509, 1647, 1695, 1722
BseXI GCAGC 4 cut(s) 92, 632, 1362, 1905
BsgI GTGCAG 2 cut(s) 895, 1904
Bsh1236I CGCG 2 cut(s) 938, 1178
Bsh1285I CGRYCG 1 cut(s) 612
BshFI GGCC 1 cut(s) 955
BshNI GGYRCC 2 cut(s) 1426, 1585
BshTI ACCGGT 1 cut(s) 764
BshVI ATCGAT 1 cut(s) 149
BsiEI CGRYCG 1 cut(s) 612
BslI CCNNNNNNNGG 6 cut(s) 136, 528, 839, 890, 1003, 1192
BsmAI GTCTC 5 cut(s) 748, 1146, 1221, 1767, 1809
BsmBI CGTCTC 2 cut(s) 1146, 1767
BsnI GGCC 1 cut(s) 955
Bsp1286I GDGCHC 3 cut(s) 523, 1133, 1297
Bsp143I GATC 5 cut(s) 205, 609, 735, 1098, 1210
BspANI GGCC 1 cut(s) 955
BspDI ATCGAT 1 cut(s) 149
BspFNI CGCG 2 cut(s) 938, 1178
BspHI TCATGA 1 cut(s) 541
BspLI GGNNCC 9 cut(s) 387, 423, 437, 520, 569, 796, 1428, 1482, 1587
BspOI GCTAGC 1 cut(s) 87
BspT107I GGYRCC 2 cut(s) 1426, 1585
BsrDI GCAATG 2 cut(s) 413, 756
BsrFI RCCGGY 8 cut(s) 764, 883, 920, 1280, 1378, 1423, 1582, 1847
BssAI RCCGGY 8 cut(s) 764, 883, 920, 1280, 1378, 1423, 1582, 1847
BssECI CCNNGG 3 cut(s) 335, 406, 1902
BssHII GCGCGC 1 cut(s) 1176
BssMI GATC 5 cut(s) 205, 609, 735, 1098, 1210
BssNI GRCGYC 3 cut(s) 894, 1427, 1586
BssT1I CCWWGG 1 cut(s) 406
Bst2UI CCWGG 2 cut(s) 834, 1904
Bst6I CTCTTC 5 cut(s) 998, 1368, 1398, 1629, 1713
BstACI GRCGYC 3 cut(s) 894, 1427, 1586
BstBAI YACGTR 1 cut(s) 1218
BstC8I GCNNGC 9 cut(s) 85, 420, 914, 1178, 1380, 1425, 1584, 1849, 1923
BstDEI CTNAG 1 cut(s) 1892
BstF5I GGATG 4 cut(s) 69, 126, 188, 1085
BstFNI CGCG 2 cut(s) 938, 1178
BstH2I RGCGCY 2 cut(s) 1430, 1589
BstHHI GCGC 6 cut(s) 620, 938, 1178, 1180, 1429, 1588
BstKTI GATC 5 cut(s) 208, 612, 738, 1101, 1213
BstMAI GTCTC 5 cut(s) 748, 1146, 1221, 1767, 1809
BstMBI GATC 5 cut(s) 205, 609, 735, 1098, 1210
BstMCI CGRYCG 1 cut(s) 612
BstMWI GCNNNNNNNGC 6 cut(s) 194, 1182, 1480, 1576, 1585, 1681
BstNI CCWGG 2 cut(s) 834, 1904
BstNSI RCATGY 2 cut(s) 348, 481
BstPAI GACNNNNGTC 1 cut(s) 1167
BstSCI CCNGG 2 cut(s) 832, 1902
BstSFI CTRYAG 2 cut(s) 198, 1165
BstUI CGCG 2 cut(s) 938, 1178
BstV1I GCAGC 4 cut(s) 92, 632, 1362, 1905
BstV2I GAAGAC 3 cut(s) 211, 696, 1128
Bsu15I ATCGAT 1 cut(s) 149
BsuI GTATCC 2 cut(s) 879, 1800
BsuRI GGCC 1 cut(s) 955
BsuTUI ATCGAT 1 cut(s) 149
BtgZI GCGATG 1 cut(s) 804
BtrI CACGTC 2 cut(s) 951, 1248
BtsCI GGATG 4 cut(s) 69, 126, 188, 1085
BtsI GCAGTG 1 cut(s) 1565
BtsIMutI CAGTG 2 cut(s) 1228, 1565
Cac8I GCNNGC 9 cut(s) 85, 420, 914, 1178, 1380, 1425, 1584, 1849, 1923
CciI TCATGA 1 cut(s) 541
CfoI GCGC 6 cut(s) 620, 938, 1178, 1180, 1429, 1588
Cfr10I RCCGGY 8 cut(s) 764, 883, 920, 1280, 1378, 1423, 1582, 1847
Cfr13I GGNCC 4 cut(s) 374, 830, 954, 1829
ClaI ATCGAT 1 cut(s) 149
CseI GACGC 1 cut(s) 883
CsiI ACCWGGT 1 cut(s) 832
Csp6I GTAC 4 cut(s) 93, 321, 1219, 1514
CspAI ACCGGT 1 cut(s) 764
CviQI GTAC 4 cut(s) 93, 321, 1219, 1514
DdeI CTNAG 1 cut(s) 1892
DinI GGCGCC 2 cut(s) 1428, 1587
DpnI GATC 5 cut(s) 207, 611, 737, 1100, 1212
DpnII GATC 5 cut(s) 205, 609, 735, 1098, 1210
DriI GACNNNNNGTC 1 cut(s) 1759
Eam1104I CTCTTC 5 cut(s) 998, 1368, 1398, 1629, 1713
Eam1105I GACNNNNNGTC 1 cut(s) 1759
EarI CTCTTC 5 cut(s) 998, 1368, 1398, 1629, 1713
EciI GGCGGA 5 cut(s) 1542, 1701, 1755, 1831, 1888
Eco130I CCWWGG 1 cut(s) 406
Eco24I GRGCYC 3 cut(s) 523, 1133, 1297
Eco32I GATATC 1 cut(s) 1123
Eco47I GGWCC 3 cut(s) 374, 830, 1829
EcoO109I RGGNCCY 1 cut(s) 374
EcoRII CCWGG 2 cut(s) 832, 1902
EcoRV GATATC 1 cut(s) 1123
EcoT14I CCWWGG 1 cut(s) 406
EcoT38I GRGCYC 3 cut(s) 523, 1133, 1297
EgeI GGCGCC 2 cut(s) 1428, 1587
EheI GGCGCC 2 cut(s) 1428, 1587
ErhI CCWWGG 1 cut(s) 406
Esp3I CGTCTC 2 cut(s) 1146, 1767
FalI AAGNNNNNCTT 4 cut(s) 507, 539, 964, 996
FbaI TGATCA 1 cut(s) 205
FokI GGATG 4 cut(s) 56, 113, 175, 1072
FriOI GRGCYC 3 cut(s) 523, 1133, 1297
FspBI CTAG 6 cut(s) 84, 723, 809, 860, 1290, 1313
GlaI GCGC 6 cut(s) 619, 937, 1177, 1179, 1428, 1587
HaeII RGCGCY 2 cut(s) 1430, 1589
HaeIII GGCC 1 cut(s) 955
HgaI GACGC 1 cut(s) 883
HhaI GCGC 6 cut(s) 620, 938, 1178, 1180, 1429, 1588
Hin1I GRCGYC 3 cut(s) 894, 1427, 1586
Hin6I GCGC 6 cut(s) 618, 936, 1176, 1178, 1427, 1586
HinP1I GCGC 6 cut(s) 618, 936, 1176, 1178, 1427, 1586
HincII GTYRAC 3 cut(s) 315, 580, 1350
HindII GTYRAC 3 cut(s) 315, 580, 1350
HinfI GANTC 8 cut(s) 106, 538, 545, 711, 749, 942, 959, 1757
Hpy166II GTNNAC 4 cut(s) 315, 580, 1350, 1723
Hpy188I TCNGA 8 cut(s) 144, 262, 336, 426, 748, 1204, 1252, 1753
Hpy188III TCNNGA 5 cut(s) 542, 872, 904, 946, 1096
Hpy8I GTNNAC 4 cut(s) 315, 580, 1350, 1723
Hpy99I CGWCG 3 cut(s) 512, 710, 1876
HpyAV CCTTC 6 cut(s) 365, 526, 1452, 1506, 1557, 1662
HpyCH4IV ACGT 8 cut(s) 311, 654, 659, 950, 1107, 1112, 1217, 1247
HpyCH4V TGCA 9 cut(s) 113, 305, 348, 381, 418, 648, 761, 912, 1921
HpyF10VI GCNNNNNNNGC 6 cut(s) 194, 1182, 1480, 1576, 1585, 1681
HpyF3I CTNAG 1 cut(s) 1892
HpySE526I ACGT 8 cut(s) 311, 654, 659, 950, 1107, 1112, 1217, 1247
Hsp92I GRCGYC 3 cut(s) 894, 1427, 1586
HspAI GCGC 6 cut(s) 618, 936, 1176, 1178, 1427, 1586
KasI GGCGCC 2 cut(s) 1426, 1585
KroI GCCGGC 4 cut(s) 1378, 1423, 1582, 1847
KroNI GCCGGC 4 cut(s) 1380, 1425, 1584, 1849
Ksp22I TGATCA 1 cut(s) 205
Kzo9I GATC 5 cut(s) 205, 609, 735, 1098, 1210
LmnI GCTCC 8 cut(s) 391, 408, 427, 435, 518, 800, 1195, 1480
Lsp1109I GCAGC 4 cut(s) 92, 632, 1362, 1905
LweI GCATC 5 cut(s) 135, 197, 286, 314, 1757
MabI ACCWGGT 1 cut(s) 832
MaeI CTAG 6 cut(s) 84, 723, 809, 860, 1290, 1313
MaeII ACGT 8 cut(s) 311, 654, 659, 950, 1107, 1112, 1217, 1247
MaeIII GTNAC 9 cut(s) 226, 655, 767, 895, 1052, 1103, 1108, 1169, 1316
MalI GATC 5 cut(s) 207, 611, 737, 1100, 1212
MboI GATC 5 cut(s) 205, 609, 735, 1098, 1210
MfeI CAATTG 1 cut(s) 783
MhlI GDGCHC 3 cut(s) 523, 1133, 1297
MluCI AATT 8 cut(s) 33, 365, 583, 591, 783, 1080, 1275, 1333
Mly113I GGCGCC 2 cut(s) 1427, 1586
MlyI GAGTC 3 cut(s) 115, 539, 743
MmeI TCCRAC 4 cut(s) 688, 771, 822, 840
MreI CGCCGGCG 2 cut(s) 1423, 1582
MroNI GCCGGC 4 cut(s) 1378, 1423, 1582, 1847
MseI TTAA 1 cut(s) 465
MslI CAYNNNNRTG 4 cut(s) 476, 633, 1007, 1812
MspA1I CMGCKG 2 cut(s) 197, 1375
MspR9I CCNGG 2 cut(s) 834, 1904
MunI CAATTG 1 cut(s) 783
MvaI CCWGG 2 cut(s) 834, 1904
MvnI CGCG 2 cut(s) 938, 1178
MwoI GCNNNNNNNGC 6 cut(s) 194, 1182, 1480, 1576, 1585, 1681
NaeI GCCGGC 4 cut(s) 1380, 1425, 1584, 1849
NarI GGCGCC 2 cut(s) 1427, 1586
NdeII GATC 5 cut(s) 205, 609, 735, 1098, 1210
NgoMIV GCCGGC 4 cut(s) 1378, 1423, 1582, 1847
NheI GCTAGC 1 cut(s) 83
NlaIV GGNNCC 9 cut(s) 387, 423, 437, 520, 569, 796, 1428, 1482, 1587
NmuCI GTSAC 7 cut(s) 226, 767, 895, 1052, 1108, 1169, 1316
NspI RCATGY 2 cut(s) 348, 481
OliI CACNNNNGTG 1 cut(s) 633
PagI TCATGA 1 cut(s) 541
PauI GCGCGC 1 cut(s) 1176
PcsI WCGNNNNNNNCGW 1 cut(s) 1766
PdiI GCCGGC 4 cut(s) 1380, 1425, 1584, 1849
PfeI GAWTC 5 cut(s) 538, 711, 942, 959, 1757
PflFI GACNNNGTC 2 cut(s) 834, 1004
PflMI CCANNNNNTGG 3 cut(s) 839, 1003, 1192
PinAI ACCGGT 1 cut(s) 764
Ple19I CGATCG 1 cut(s) 612
PleI GAGTC 3 cut(s) 114, 539, 743
PluTI GGCGCC 2 cut(s) 1430, 1589
PpsI GAGTC 3 cut(s) 114, 539, 743
Ppu21I YACGTR 1 cut(s) 1218
PpuMI RGGWCCY 1 cut(s) 374
PshAI GACNNNNGTC 1 cut(s) 1167
Psp1406I AACGTT 1 cut(s) 654
Psp5II RGGWCCY 1 cut(s) 374
Psp6I CCWGG 2 cut(s) 832, 1902
PspGI CCWGG 2 cut(s) 832, 1902
PspN4I GGNNCC 9 cut(s) 387, 423, 437, 520, 569, 796, 1428, 1482, 1587
PspPI GGNCC 4 cut(s) 374, 830, 954, 1829
PspPPI RGGWCCY 1 cut(s) 374
PsyI GACNNNGTC 2 cut(s) 834, 1004
PteI GCGCGC 1 cut(s) 1176
PvuI CGATCG 1 cut(s) 612
RsaI GTAC 4 cut(s) 94, 322, 1220, 1515
RsaNI GTAC 4 cut(s) 93, 321, 1219, 1514
RseI CAYNNNNRTG 4 cut(s) 476, 633, 1007, 1812
SaqAI TTAA 1 cut(s) 465
Sau3AI GATC 5 cut(s) 205, 609, 735, 1098, 1210
Sau96I GGNCC 4 cut(s) 374, 830, 954, 1829
ScaI AGTACT 2 cut(s) 94, 322
SchI GAGTC 3 cut(s) 115, 539, 743
ScrFI CCNGG 2 cut(s) 834, 1904
SduI GDGCHC 3 cut(s) 523, 1133, 1297
SexAI ACCWGGT 1 cut(s) 832
SfaNI GCATC 5 cut(s) 135, 197, 286, 314, 1757
SfcI CTRYAG 2 cut(s) 198, 1165
SfoI GGCGCC 2 cut(s) 1428, 1587
SgrAI CRCCGGYG 2 cut(s) 1423, 1582
SinI GGWCC 3 cut(s) 374, 830, 1829
SmiMI CAYNNNNRTG 4 cut(s) 476, 633, 1007, 1812
Sse9I AATT 8 cut(s) 33, 365, 583, 591, 783, 1080, 1275, 1333
SspDI GGCGCC 2 cut(s) 1426, 1585
SspMI CTAG 6 cut(s) 84, 723, 809, 860, 1290, 1313
StyD4I CCNGG 2 cut(s) 832, 1902
StyI CCWWGG 1 cut(s) 406
TaiI ACGT 8 cut(s) 314, 657, 662, 953, 1110, 1115, 1220, 1250
TasI AATT 8 cut(s) 33, 365, 583, 591, 783, 1080, 1275, 1333
TatI WGTACW 2 cut(s) 92, 320
TauI GCSGC 9 cut(s) 1345, 1375, 1477, 1531, 1534, 1582, 1636, 1687, 1847
TfiI GAWTC 5 cut(s) 538, 711, 942, 959, 1757
Tru1I TTAA 1 cut(s) 465
Tru9I TTAA 1 cut(s) 465
TscAI CASTG 2 cut(s) 1228, 1572
TseFI GTSAC 7 cut(s) 226, 767, 895, 1052, 1108, 1169, 1316
TseI GCWGC 4 cut(s) 80, 645, 1375, 1918
Tsp45I GTSAC 7 cut(s) 226, 767, 895, 1052, 1108, 1169, 1316
TspDTI ATGAA 4 cut(s) 38, 87, 167, 629
TspGWI ACGGA 2 cut(s) 525, 723
TspRI CASTG 2 cut(s) 1228, 1572
Tth111I GACNNNGTC 2 cut(s) 834, 1004
Van91I CCANNNNNTGG 3 cut(s) 839, 1003, 1192
VpaK11BI GGWCC 3 cut(s) 374, 830, 1829
XapI RAATTY 2 cut(s) 33, 365
XceI RCATGY 2 cut(s) 348, 481
XspI CTAG 6 cut(s) 84, 723, 809, 860, 1290, 1313
ZrmI AGTACT 2 cut(s) 94, 322
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.