RchiOBHm_Chr4g0385131

RING-like zinc finger

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0003873
Physical Location & Seq
Forward (+)
616141 .. 630302
14162 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2352 bp
ATGGAGGACATGGACATCGATGATGTGGTTATACCTGACACGCCACCTACCAGACATGGTGTTTGCAGGGAATCTGTTGGTAAAGCCTGTAGTTCACCATTAGCTCACAAGTTGAATAATTCAGACTTTGTTGATGAGAAATCTGGGAATGGGCCAAGGGTCAAGGAGAGATTCTTCTTTGAAAATGGTCAAAATAAAAGAATTGTTATTCGCCCTCCGAGAAATCCTAGCAATCTTGCAATTAAGAATGGCTCCTCAGGAACCAATTCATCTGCTTCCCAGAATGCTCACCTCTTTAGAAGACCAGCAGTGGGCAGAAACTCTAGTTGTGAGACCAAACATTCATCTGGGACCGGAAGCTTGGACAAAGGAAAGTCTATAAGCATTAAAGTGTCGTCTAAATCTTCTGCTTTTCCAGAAAACATGGAAGTTCTTGATTTAACTGAACAGAATGGTCACTCCGAGTTACACAGAAAGGTTTTCCCACATGGAAAATTAGAAGATGTTGCTCAAGGCACAAAAAACTGGCAGATAATGTCAGTTGGCAGTTCTACAGATTGCTCTGCAAATTACTTGGAGAGATCCAGAAATGCCGACAAGGCTAAGGAAAAAATAGATGACAGTACATATAATGGTGTGGGTTTAGCTGTGCCCCTGGGAAAAAGGATTGATCTGCCTACTGAGCCTCAACATAAAACAGAGCATCAAAAGCCCATGGCTCTTCATTCTTTTACCCTGCCAAGAGTCAGTGGCCAGAAAAGGTTGGTAAGGAATGGTTGTATTTCCCCACATAACATAGCAACAAGGTCTAAACAATTAAATGTAGAAAATAATACAAGTTCCAAGAATATTGAACACAGTCATGCTGTCGACGCGGTTTCCAGTGGTTCACCATATGTCATAGGTACAAGTGATGTGGTCACTGAAGAGAATAAAAGGGAAAGAGCGAAAGGGAAAGGGGTAATGGTTCAACCTTCTACACCAAAGGAGAGTAATGAAAGAATTGTTCATACATCAAGCAGTCTTCTGAATGATAATATTGAAGCTAATAGAACCAGACATGTTGGCAAAGATATATCTGGATGCTCTGAACGAATAGGTGGCTGGAGAAGTACGCGTAATCGTTCAAGGACATTAGATCCTCTTTTGTCTGATTCAACTGAGCATCTTCCCAGAATAATTAACAGTGCCGGAAACTTTGTAAATCAACATGGAAACAGAGTAGAGAGGGAGGATACTGGGAGGGAAGGAAACTTTGTAAACTTTGCAGACGATCTGAATTCAACTCAAACAGCTTCAACAGTTGTATCTGAGCCAGGCTGGATGGCTGGACAACGTCGTGAAGGAAGGAGAGTTAGTAAAAGGGAGAAGAAACGGGGATTGAATATGGGAAATCATGGTGAATGCTCTACGTTGGATAATGGTGACTCAGACATTATGTTTCTCGGTTCATCTGAGACATCTGAAAGTTCAAAATCATCCAGGATTCACAGACCTCAGTTTCAGGGAATGTTGAGGCCAATTATTGAAGTTGATGAGTTGTCACCTGCTGCAGGTCCCTCTGAACCCCAAGGTATCAATTCCATGAATGATGATTCAGAGGCTAGGGCAAGGCAACTAGAAGCCGATGAGATGTTGGCACGTGAACTGCAGGAACAATTGTATCATGAGGTTCCTGCTTTTGGTGGTGGCGAGCATTTTGATGAACATCTAGCTTGGGCACTGCAGCGGGAGGAGAATGCTTTTACTACGTCATCTAGTGGAAGGCACAATATGCCTCATAGTAGAGGCTCCACAATATTGCATTCTCATAGACAGCCCCCGTCACAATCGTCTCAAAATCCTTCAACAAGGAGAGGAGCCCAGGCTCGAGTTCCCAGCCATTCTACAATGGCACAGTTAAGGAGTCGCCTTCGCAATCAGGCTCCTAGAGTATCAAATAGAAGAAGGAATCTGCGAGTTCCTTTTCCTTCGGACATGGATCTAGACATGAGACTTAATATACTTGAAGCTTTAGAGACTGCTGTTGGGGATGTTGGAGATGTGGGATTGAATAATCACATGTTTCGACTTCAGCGGGATTTCAATGCTGATGATTATGAGATGTTATTGGCACTTGATGAAAACAATCATCAACTTGGCGGTGCAACAGCTAATCAAATTAATAATTTGCCTCAATCTACAGTACAGACTGATGCCTCTGAAGAAGCTTGTGCAATCTGTCTTGAAACTCCAACACTTGGAGAAACAGTTCGTCATCTTCCTTGCTTGCACAGATTTCACAAAGATTGTATCGATCCATGGCTCAACAGAAAAACTTCGTGCCCAGTTTGCAAGTGTTCGATCAGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
zf-RING_2

Protein Analysis

783

Amino Acids

86.59

Weight (kDa)

7.68

Isoelectric Point (pI)

53.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-rbx1 PF12678 735 - 779 1.8e-07 RING-H2 zinc finger domain
zf-RING_2 PF13639 737 - 779 6.1e-12 Ring finger domain
zf-C3HC4_2 PF13923 738 - 778 2.1e-08 Zinc finger, C3HC4 type (RING finger)
zf-RING_11 PF17123 738 - 765 4e-08 RING-like zinc finger
zf-C3HC4 PF00097 738 - 778 7.6e-08 Zinc finger, C3HC4 type (RING finger)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1555
Acc36I ACCTGC 2 cut(s) 1544, 1555
AccB7I CCANNNNNTGG 1 cut(s) 2240
AccI GTMKAC 1 cut(s) 870
AccII CGCG 2 cut(s) 875, 1117
AciI CCGC 4 cut(s) 875, 1729, 2077, 2142
AclWI GGATC 4 cut(s) 576, 1133, 1989, 2291
AcoI YGGCCR 1 cut(s) 751
AcsI RAATTY 1 cut(s) 1279
AcuI CTGAAG 3 cut(s) 945, 2057, 2223
AcvI CACGTG 1 cut(s) 1643
AfaI GTAC 4 cut(s) 625, 907, 1114, 2187
AfiI CCNNNNNNNGG 4 cut(s) 311, 1553, 1682, 2240
AflIII ACRYGT 3 cut(s) 1060, 1115, 2061
AjnI CCWGG 4 cut(s) 654, 1315, 1481, 1863
AloI GAACNNNNNNTCC 2 cut(s) 2235, 2267
AluBI AGCT 9 cut(s) 104, 360, 647, 1046, 1295, 1715, 2012, 2153, 2210
AluI AGCT 9 cut(s) 104, 360, 647, 1046, 1295, 1715, 2012, 2153, 2210
Alw26I GTCTC 5 cut(s) 326, 1451, 1839, 1987, 2012
AlwI GGATC 4 cut(s) 576, 1133, 1989, 2291
Ama87I CYCGRG 1 cut(s) 1869
AoxI GGCC 3 cut(s) 152, 751, 1517
ApeKI GCWGC 2 cut(s) 1550, 1726
ApoI RAATTY 1 cut(s) 1279
ArsI GACNNNNNNTTYG 2 cut(s) 45, 77
AseI ATTAAT 1 cut(s) 2163
Asp700I GAANNNNTTC 3 cut(s) 265, 2250, 2317
AspS9I GGNCC 3 cut(s) 152, 351, 1556
AsuHPI GGTGA 6 cut(s) 87, 281, 882, 1412, 1436, 1536
AvaI CYCGRG 1 cut(s) 1869
AvaII GGWCC 2 cut(s) 351, 1556
AxyI CCTNAGG 1 cut(s) 256
BaeGI GKGCMC 3 cut(s) 654, 1723, 2327
BaeI ACNNNNGTAYC 4 cut(s) 1290, 1323, 1646, 1679
BalI TGGCCA 1 cut(s) 753
BanII GRGCYC 1 cut(s) 1864
BbrPI CACGTG 1 cut(s) 1643
BbsI GAAGAC 2 cut(s) 307, 1016
BbvI GCAGC 2 cut(s) 1537, 1738
BccI CCATC 1 cut(s) 1318
BciT130I CCWGG 4 cut(s) 656, 1317, 1483, 1865
BciVI GTATCC 1 cut(s) 1228
BcoDI GTCTC 5 cut(s) 326, 1451, 1839, 1987, 2012
BfaI CTAG 8 cut(s) 228, 324, 1605, 1619, 1712, 1758, 1929, 1985
BfmI CTRYAG 6 cut(s) 88, 552, 1551, 1649, 1724, 2181
BfuAI ACCTGC 2 cut(s) 1544, 1555
BfuI GTATCC 1 cut(s) 1228
BglI GCCNNNNNGGC 1 cut(s) 599
BisI GCNGC 2 cut(s) 1551, 1727
BlsI GCNGC 2 cut(s) 1552, 1728
Bme1390I CCNGG 4 cut(s) 656, 1317, 1483, 1865
Bme18I GGWCC 2 cut(s) 351, 1556
BmeT110I CYCGRG 1 cut(s) 1869
BmgT120I GGNCC 3 cut(s) 152, 351, 1556
BmiI GGNNCC 8 cut(s) 253, 262, 352, 1558, 1674, 1792, 1861, 1926
BmrFI CCNGG 4 cut(s) 656, 1317, 1483, 1865
BmrI ACTGGG 2 cut(s) 1248, 2321
BmsI GCATC 4 cut(s) 712, 1073, 1174, 2185
BmuI ACTGGG 2 cut(s) 1248, 2321
BpiI GAAGAC 2 cut(s) 307, 1016
BpmI CTGGAG 1 cut(s) 1126
Bpu10I CCTNAGC 1 cut(s) 603
BpuEI CTTGAG 1 cut(s) 495
Bsa29I ATCGAT 2 cut(s) 18, 2295
BsaAI YACGTR 1 cut(s) 1643
BsaBI GATNNNNATC 1 cut(s) 1707
BsaI GGTCTC 1 cut(s) 326
BsaJI CCNNGG 7 cut(s) 155, 654, 655, 714, 1570, 1863, 2300
BsaWI WCCGGW 1 cut(s) 353
BsaXI ACNNNNNCTCC 4 cut(s) 1342, 1372, 2235, 2265
Bsc4I CCNNNNNNNGG 4 cut(s) 311, 1553, 1682, 2240
Bse1I ACTGG 4 cut(s) 530, 882, 1243, 2327
Bse21I CCTNAGG 1 cut(s) 256
Bse8I GATNNNNATC 1 cut(s) 1707
BseBI CCWGG 4 cut(s) 656, 1317, 1483, 1865
BseCI ATCGAT 2 cut(s) 18, 2295
BseDI CCNNGG 7 cut(s) 155, 654, 655, 714, 1570, 1863, 2300
BseGI GGATG 4 cut(s) 1088, 1329, 1478, 2038
BseJI GATNNNNATC 1 cut(s) 1707
BseLI CCNNNNNNNGG 4 cut(s) 311, 1553, 1682, 2240
BseMII CTCAG 7 cut(s) 270, 672, 1152, 1302, 1443, 1446, 1511
BseNI ACTGG 4 cut(s) 530, 882, 1243, 2327
BseRI GAGGAG 3 cut(s) 244, 1748, 1872
BseSI GKGCMC 3 cut(s) 654, 1723, 2327
BseXI GCAGC 2 cut(s) 1537, 1738
BseYI CCCAGC 1 cut(s) 1877
Bsh1236I CGCG 2 cut(s) 875, 1117
BshFI GGCC 3 cut(s) 154, 753, 1519
BshVI ATCGAT 2 cut(s) 18, 2295
BsiHKCI CYCGRG 1 cut(s) 1869
BsiSI CCGG 2 cut(s) 354, 1191
BslFI GGGAC 2 cut(s) 364, 1542
BslI CCNNNNNNNGG 4 cut(s) 311, 1553, 1682, 2240
BsmAI GTCTC 5 cut(s) 326, 1451, 1839, 1987, 2012
BsmBI CGTCTC 1 cut(s) 1839
BsmFI GGGAC 2 cut(s) 364, 1542
BsmI GAATGC 4 cut(s) 289, 1409, 1744, 1804
BsnI GGCC 3 cut(s) 154, 753, 1519
Bso31I GGTCTC 1 cut(s) 326
BsoBI CYCGRG 1 cut(s) 1869
Bsp1286I GDGCHC 4 cut(s) 654, 1723, 1864, 2327
Bsp143I GATC 7 cut(s) 581, 670, 1138, 1273, 1981, 2296, 2343
Bsp19I CCATGG 2 cut(s) 714, 2300
BspACI CCGC 4 cut(s) 875, 1729, 2077, 2142
BspANI GGCC 3 cut(s) 154, 753, 1519
BspCNI CTCAG 7 cut(s) 269, 673, 1153, 1303, 1442, 1447, 1510
BspDI ATCGAT 2 cut(s) 18, 2295
BspFNI CGCG 2 cut(s) 875, 1117
BspHI TCATGA 1 cut(s) 1666
BspLI GGNNCC 8 cut(s) 253, 262, 352, 1558, 1674, 1792, 1861, 1926
BspMAI CTGCAG 3 cut(s) 1555, 1653, 1728
BspMI ACCTGC 2 cut(s) 1544, 1555
BspPI GGATC 4 cut(s) 576, 1133, 1989, 2291
BspQI GCTCTTC 1 cut(s) 726
BspTNI GGTCTC 1 cut(s) 326
BsrI ACTGG 4 cut(s) 530, 882, 1243, 2327
BssECI CCNNGG 7 cut(s) 155, 654, 655, 714, 1570, 1863, 2300
BssMI GATC 7 cut(s) 581, 670, 1138, 1273, 1981, 2296, 2343
BssT1I CCWWGG 4 cut(s) 155, 714, 1570, 2300
Bst2UI CCWGG 4 cut(s) 656, 1317, 1483, 1865
Bst4CI ACNGT 7 cut(s) 623, 860, 1187, 1303, 1899, 2185, 2251
Bst6I CTCTTC 2 cut(s) 726, 921
BstAPI GCANNNNNTGC 1 cut(s) 1774
BstBAI YACGTR 1 cut(s) 1643
BstC8I GCNNGC 2 cut(s) 1694, 2270
BstDEI CTNAG 8 cut(s) 256, 603, 681, 1161, 1311, 1429, 1455, 1497
BstDSI CCRYGG 2 cut(s) 714, 2300
BstENI CCTNNNNNAGG 1 cut(s) 1551
BstF5I GGATG 4 cut(s) 1088, 1329, 1478, 2038
BstFNI CGCG 2 cut(s) 875, 1117
BstKTI GATC 7 cut(s) 584, 673, 1141, 1276, 1984, 2299, 2346
BstMAI GTCTC 5 cut(s) 326, 1451, 1839, 1987, 2012
BstMBI GATC 7 cut(s) 581, 670, 1138, 1273, 1981, 2296, 2343
BstMWI GCNNNNNNNGC 6 cut(s) 599, 682, 709, 872, 1774, 2331
BstNI CCWGG 4 cut(s) 656, 1317, 1483, 1865
BstNSI RCATGY 2 cut(s) 1064, 2065
BstSCI CCNGG 4 cut(s) 654, 1315, 1481, 1863
BstSFI CTRYAG 6 cut(s) 88, 552, 1551, 1649, 1724, 2181
BstSLI GKGCMC 3 cut(s) 654, 1723, 2327
BstUI CGCG 2 cut(s) 875, 1117
BstV1I GCAGC 2 cut(s) 1537, 1738
BstV2I GAAGAC 2 cut(s) 307, 1016
BstX2I RGATCY 3 cut(s) 581, 1138, 1981
BstYI RGATCY 3 cut(s) 581, 1138, 1981
Bsu15I ATCGAT 2 cut(s) 18, 2295
Bsu36I CCTNAGG 1 cut(s) 256
BsuI GTATCC 1 cut(s) 1228
BsuRI GGCC 3 cut(s) 154, 753, 1519
BsuTUI ATCGAT 2 cut(s) 18, 2295
BtgI CCRYGG 2 cut(s) 714, 2300
BtsCI GGATG 4 cut(s) 1088, 1329, 1478, 2038
BtsI GCAGTG 2 cut(s) 315, 1721
BtsIMutI CAGTG 6 cut(s) 315, 754, 889, 921, 1192, 1721
BveI ACCTGC 2 cut(s) 1544, 1555
Cac8I GCNNGC 2 cut(s) 1694, 2270
CciI TCATGA 1 cut(s) 1666
Cfr13I GGNCC 3 cut(s) 152, 351, 1556
ClaI ATCGAT 2 cut(s) 18, 2295
CseI GACGC 1 cut(s) 881
Csp6I GTAC 4 cut(s) 624, 906, 1113, 2186
CspCI CAANNNNNGTGG 2 cut(s) 897, 932
CviQI GTAC 4 cut(s) 624, 906, 1113, 2186
DdeI CTNAG 8 cut(s) 256, 603, 681, 1161, 1311, 1429, 1455, 1497
DpnI GATC 7 cut(s) 583, 672, 1140, 1275, 1983, 2298, 2345
DpnII GATC 7 cut(s) 581, 670, 1138, 1273, 1981, 2296, 2343
EaeI YGGCCR 1 cut(s) 751
Eam1104I CTCTTC 2 cut(s) 726, 921
EarI CTCTTC 2 cut(s) 726, 921
Eco130I CCWWGG 4 cut(s) 155, 714, 1570, 2300
Eco24I GRGCYC 1 cut(s) 1864
Eco31I GGTCTC 1 cut(s) 326
Eco47I GGWCC 2 cut(s) 351, 1556
Eco57I CTGAAG 3 cut(s) 945, 2057, 2223
Eco72I CACGTG 1 cut(s) 1643
Eco81I CCTNAGG 1 cut(s) 256
Eco88I CYCGRG 1 cut(s) 1869
EcoNI CCTNNNNNAGG 1 cut(s) 1551
EcoO109I RGGNCCY 1 cut(s) 1556
EcoRI GAATTC 1 cut(s) 1279
EcoRII CCWGG 4 cut(s) 654, 1315, 1481, 1863
EcoT14I CCWWGG 4 cut(s) 155, 714, 1570, 2300
EcoT38I GRGCYC 1 cut(s) 1864
ErhI CCWWGG 4 cut(s) 155, 714, 1570, 2300
Esp3I CGTCTC 1 cut(s) 1839
FaqI GGGAC 2 cut(s) 364, 1542
FauI CCCGC 2 cut(s) 1722, 2070
FauNDI CATATG 1 cut(s) 895
FblI GTMKAC 1 cut(s) 870
Fnu4HI GCNGC 2 cut(s) 1551, 1727
FokI GGATG 4 cut(s) 1095, 1336, 1465, 2045
FriOI GRGCYC 1 cut(s) 1864
Fsp4HI GCNGC 2 cut(s) 1551, 1727
FspBI CTAG 8 cut(s) 228, 324, 1605, 1619, 1712, 1758, 1929, 1985
GluI GCNGC 2 cut(s) 1551, 1727
GsaI CCCAGC 1 cut(s) 1881
GsuI CTGGAG 1 cut(s) 1126
HaeIII GGCC 3 cut(s) 154, 753, 1519
HapII CCGG 2 cut(s) 354, 1191
HgaI GACGC 1 cut(s) 881
HincII GTYRAC 1 cut(s) 871
HindII GTYRAC 1 cut(s) 871
HindIII AAGCTT 3 cut(s) 358, 2010, 2208
HinfI GANTC 9 cut(s) 71, 171, 744, 1154, 1427, 1486, 1595, 1906, 1951
HpaII CCGG 2 cut(s) 354, 1191
HphI GGTGA 6 cut(s) 87, 281, 882, 1412, 1436, 1536
Hpy166II GTNNAC 5 cut(s) 95, 871, 890, 1261, 1646
Hpy188III TCNNGA 9 cut(s) 258, 416, 434, 585, 1080, 1340, 1667, 1985, 2225
Hpy8I GTNNAC 5 cut(s) 95, 871, 890, 1261, 1646
Hpy99I CGWCG 2 cut(s) 875, 1341
HpyAV CCTTC 9 cut(s) 984, 1241, 1337, 1341, 1758, 1854, 1922, 1941, 1980
HpyCH4III ACNGT 7 cut(s) 623, 860, 1187, 1303, 1899, 2185, 2251
HpyCH4IV ACGT 4 cut(s) 1336, 1412, 1642, 1751
HpyF10VI GCNNNNNNNGC 6 cut(s) 599, 682, 709, 872, 1774, 2331
HpyF3I CTNAG 8 cut(s) 256, 603, 681, 1161, 1311, 1429, 1455, 1497
HpySE526I ACGT 4 cut(s) 1336, 1412, 1642, 1751
Kzo9I GATC 7 cut(s) 581, 670, 1138, 1273, 1981, 2296, 2343
LguI GCTCTTC 1 cut(s) 726
LmnI GCTCC 4 cut(s) 257, 1796, 1859, 1930
Lsp1109I GCAGC 2 cut(s) 1537, 1738
LweI GCATC 4 cut(s) 712, 1073, 1174, 2185
MaeI CTAG 8 cut(s) 228, 324, 1605, 1619, 1712, 1758, 1929, 1985
MaeII ACGT 4 cut(s) 1336, 1412, 1642, 1751
MaeIII GTNAC 6 cut(s) 455, 465, 919, 1424, 1542, 1824
MalI GATC 7 cut(s) 583, 672, 1140, 1275, 1983, 2298, 2345
MboI GATC 7 cut(s) 581, 670, 1138, 1273, 1981, 2296, 2343
MfeI CAATTG 1 cut(s) 1658
MflI RGATCY 3 cut(s) 581, 1138, 1981
MhlI GDGCHC 4 cut(s) 654, 1723, 1864, 2327
MlsI TGGCCA 1 cut(s) 753
MluI ACGCGT 1 cut(s) 1115
MluNI TGGCCA 1 cut(s) 753
MlyI GAGTC 3 cut(s) 753, 1421, 1915
MmeI TCCRAC 3 cut(s) 1395, 2017, 2258
Mox20I TGGCCA 1 cut(s) 753
MroXI GAANNNNTTC 3 cut(s) 265, 2250, 2317
MscI TGGCCA 1 cut(s) 753
MseI TTAA 8 cut(s) 243, 387, 440, 818, 1182, 1901, 1998, 2163
MslI CAYNNNNRTG 3 cut(s) 389, 861, 1701
Msp20I TGGCCA 1 cut(s) 753
MspA1I CMGCKG 2 cut(s) 1729, 2077
MspI CCGG 2 cut(s) 354, 1191
MspR9I CCNGG 4 cut(s) 656, 1317, 1483, 1865
MunI CAATTG 1 cut(s) 1658
Mva1269I GAATGC 4 cut(s) 289, 1409, 1744, 1804
MvaI CCWGG 4 cut(s) 656, 1317, 1483, 1865
MvnI CGCG 2 cut(s) 875, 1117
MwoI GCNNNNNNNGC 6 cut(s) 599, 682, 709, 872, 1774, 2331
NcoI CCATGG 2 cut(s) 714, 2300
NdeI CATATG 1 cut(s) 895
NdeII GATC 7 cut(s) 581, 670, 1138, 1273, 1981, 2296, 2343
NlaIV GGNNCC 8 cut(s) 253, 262, 352, 1558, 1674, 1792, 1861, 1926
NmuCI GTSAC 5 cut(s) 455, 919, 1424, 1542, 1824
NspI RCATGY 2 cut(s) 1064, 2065
PaeR7I CTCGAG 1 cut(s) 1869
PagI TCATGA 1 cut(s) 1666
PaqCI CACCTGC 1 cut(s) 1555
PasI CCCWGGG 1 cut(s) 655
PciI ACATGT 2 cut(s) 1060, 2061
PciSI GCTCTTC 1 cut(s) 726
PctI GAATGC 4 cut(s) 289, 1409, 1744, 1804
PdmI GAANNNNTTC 3 cut(s) 265, 2250, 2317
PfeI GAWTC 6 cut(s) 71, 171, 1154, 1486, 1595, 1951
PflFI GACNNNGTC 1 cut(s) 1335
PflMI CCANNNNNTGG 1 cut(s) 2240
PfoI TCCNGGA 1 cut(s) 1481
PkrI GCNGC 2 cut(s) 1552, 1728
PleI GAGTC 3 cut(s) 752, 1421, 1914
PmaCI CACGTG 1 cut(s) 1643
PmlI CACGTG 1 cut(s) 1643
PpsI GAGTC 3 cut(s) 752, 1421, 1914
Ppu21I YACGTR 1 cut(s) 1643
PpuMI RGGWCCY 1 cut(s) 1556
PscI ACATGT 2 cut(s) 1060, 2061
PshBI ATTAAT 1 cut(s) 2163
Psp5II RGGWCCY 1 cut(s) 1556
Psp6I CCWGG 4 cut(s) 654, 1315, 1481, 1863
PspCI CACGTG 1 cut(s) 1643
PspFI CCCAGC 1 cut(s) 1877
PspGI CCWGG 4 cut(s) 654, 1315, 1481, 1863
PspN4I GGNNCC 8 cut(s) 253, 262, 352, 1558, 1674, 1792, 1861, 1926
PspPI GGNCC 3 cut(s) 152, 351, 1556
PspPPI RGGWCCY 1 cut(s) 1556
PspXI VCTCGAGB 1 cut(s) 1869
PstI CTGCAG 3 cut(s) 1555, 1653, 1728
PsuI RGATCY 3 cut(s) 581, 1138, 1981
PsyI GACNNNGTC 1 cut(s) 1335
RsaI GTAC 4 cut(s) 625, 907, 1114, 2187
RsaNI GTAC 4 cut(s) 624, 906, 1113, 2186
RseI CAYNNNNRTG 3 cut(s) 389, 861, 1701
SalI GTCGAC 1 cut(s) 869
SapI GCTCTTC 1 cut(s) 726
SaqAI TTAA 8 cut(s) 243, 387, 440, 818, 1182, 1901, 1998, 2163
SatI GCNGC 2 cut(s) 1551, 1727
Sau3AI GATC 7 cut(s) 581, 670, 1138, 1273, 1981, 2296, 2343
Sau96I GGNCC 3 cut(s) 152, 351, 1556
SchI GAGTC 3 cut(s) 753, 1421, 1915
ScrFI CCNGG 4 cut(s) 656, 1317, 1483, 1865
SduI GDGCHC 4 cut(s) 654, 1723, 1864, 2327
SfaNI GCATC 4 cut(s) 712, 1073, 1174, 2185
SfcI CTRYAG 6 cut(s) 88, 552, 1551, 1649, 1724, 2181
Sfr274I CTCGAG 1 cut(s) 1869
SinI GGWCC 2 cut(s) 351, 1556
SlaI CTCGAG 1 cut(s) 1869
SmiMI CAYNNNNRTG 3 cut(s) 389, 861, 1701
SmlI CTYRAG 2 cut(s) 510, 1869
SmoI CTYRAG 2 cut(s) 510, 1869
SsiI CCGC 4 cut(s) 875, 1729, 2077, 2142
SspI AATATT 3 cut(s) 850, 1039, 1800
SspMI CTAG 8 cut(s) 228, 324, 1605, 1619, 1712, 1758, 1929, 1985
StyD4I CCNGG 4 cut(s) 654, 1315, 1481, 1863
StyI CCWWGG 4 cut(s) 155, 714, 1570, 2300
TaaI ACNGT 7 cut(s) 623, 860, 1187, 1303, 1899, 2185, 2251
TaiI ACGT 4 cut(s) 1339, 1415, 1645, 1754
TaqI TCGA 6 cut(s) 18, 870, 1870, 2068, 2295, 2342
TatI WGTACW 2 cut(s) 623, 2185
TfiI GAWTC 6 cut(s) 71, 171, 1154, 1486, 1595, 1951
Tru1I TTAA 8 cut(s) 243, 387, 440, 818, 1182, 1901, 1998, 2163
Tru9I TTAA 8 cut(s) 243, 387, 440, 818, 1182, 1901, 1998, 2163
TscAI CASTG 6 cut(s) 315, 754, 889, 928, 1192, 1728
TseFI GTSAC 5 cut(s) 455, 919, 1424, 1542, 1824
TseI GCWGC 2 cut(s) 1550, 1726
Tsp45I GTSAC 5 cut(s) 455, 919, 1424, 1542, 1824
TspDTI ATGAA 9 cut(s) 258, 333, 713, 998, 1011, 1440, 1601, 1719, 2136
TspRI CASTG 6 cut(s) 315, 754, 889, 928, 1192, 1728
Tth111I GACNNNGTC 1 cut(s) 1335
Van91I CCANNNNNTGG 1 cut(s) 2240
VpaK11BI GGWCC 2 cut(s) 351, 1556
VspI ATTAAT 1 cut(s) 2163
XagI CCTNNNNNAGG 1 cut(s) 1551
XapI RAATTY 1 cut(s) 1279
XbaI TCTAGA 1 cut(s) 1984
XceI RCATGY 2 cut(s) 1064, 2065
XhoI CTCGAG 1 cut(s) 1869
XmiI GTMKAC 1 cut(s) 870
XmnI GAANNNNTTC 3 cut(s) 265, 2250, 2317
XspI CTAG 8 cut(s) 228, 324, 1605, 1619, 1712, 1758, 1929, 1985
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.