Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0004671

Physical Location & Seq

Genomic Coordinates Reverse (-)

29067009 .. 29078158

Gene Structure 11150 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGGTTGCTTCGGATATATGTCCAACCGAGGATGCCGTTCAGGCTTTTTTGGACCACTTGGTTGACCCAATACTTCCAGCAAAATCTTCTCTGCGGGATACCCCATCACTCTCTCAACAGCAGTCAGTTGCAAAACAGGTGCATGCTGTTGTGCTACTATACAATTACTACCACAGAAAGCAATGTCCAAAGCTAGAGGTTTTGTGTTTTAATTCGTTTTGCAAGTTGGTTTTGGATCTGAAACCAGCCTTGCTAGCTCATATGAAATTTATGAAAAGGTCAGGTGATACTGAATTGGTTGATCAGGAGAAACAACTTTCAGTTACCGAAAGAACAATAATGGAAGCATGTCAAATATCTACAAGTTTAGATGCATCCATGGGTGCTCCAAACACTGAGGGATGGCCAATTTCCAAAGTTACAGTTCTTTTAGTTGACTCCAAGAAGGAGAACTGCTATTTGCAATTCAGTTCCAATTCCATGACCCAGGGGGTTTGGTCAGTGATTGATAAAAATTTGGAGGTCAGAGATCACAGTTCAGAAGATACAAGGGGGTTAAAACATGTAAACAAAAGCAAAAGAGTCACTGGAAAACCTTCAAGAGGAGAACCAAGGATTGATGAAACTAGTTGTCAAAAACTGGCATATTCAGCAATTACTGAGGCTACAGGTATTAGTCAAAATGATCTTCTTGTTTTGGAAAGCCATGTCGTATTTTCGGATAGTAAAGAAAAGTCAGCTGCTTGTTTTTTTATAGTTCAGTGTACCCAATCAGGCAAGGGTGATATTCAGCTTCCTATTAAAGATGTTATTGACAGCCTCCAGGGTCCTCTGGTCACAAAGAATTCCCGCGGCTGGACAGTTACAACAGTTGTTGAGTACTTCCATGTGCTTCCTTATGCTGAGATTTTGTCCGACTGGTTTCATAGGAGAGAATTCTCAAATGGTTTGAAAGATTCAAGGCTAGGAGCGGGAAATGTAAATGTGGCTAGCCCTAAAAGGACCGAAACACCTTCCAAACCAGGAATTTGCAAAAATCAAGAGGAGTCTCATGTAATTGATGTTGTGATAGAGGATCTTGGAAGCAACACAAAAAATTCTGAACCCAAATCATGGGAGCAAAAAGATAGCAGTGGATGTTGCAAGATAGATCTGGCTCATGCTTTCAATGGGTCTCAGGAAATGGAGTTGGAGGGGTCTTCCATGGTTGCCTCGAAGAAGGAAAAAATTTGTAAGAAAATTTCAAGTCCCGTTCAAGTTGTCAGCCACCAAGATGACATGCATTCCTGTATCGAAAGTGAAAAGCCCAAAACCCAAGACAAGTTGTCTCATGTAAATTGTGTCAGGATAAAGGATATTGGGAACAGCATAAGCTGTTCTACGCCTCGATCATATAAGCAGAAAGATACCACTGTATATAAAAATACAAGTCCTGCTGAAGCTTCCAATGGGCCTCAGAAATTGTGCATAGATGACTGTTCCATGGTTCCCTTGCAGAATGTAGATAGCTGTGAGAAAATTTCAAGCACCATTCAAGTTGTCAATCAGCAAAAAAAGATTTCCTCGATTCGCTCTGAACTAAATGGCTCAGTAAGTAATACGAAGGTTGAGACTGTGAACCGGACAAGTCAATCCCTTACTGACAAGCTACAGATTAGTATAGCTTCAAAAGAACACATCTTGTCAGAAACTGCTTTGAAAGTTCTTATGAAAAAAAGGAATGAGCTGTCTATTAAGAAGCGCAATATAGAGGATGAGCTTGCTCGGTGTGAAAAAGATATCCAGACAATTATAAATGGTGGTGAAGATGGCTCAGCAGTAATAGTTGAGTCTCTTATAGAAGGTTGTAATGATGGATATCTAAGAAATGAAAGGACTCATACACTGCTAGAAGAGGAATGCTCTTCTAAATCTGTCAAGAGGAAGAGGCTGTCAGAGGCTATCCTTGACAAGCAGAATCAATGCCAGGAATTGGATGGCATATGTTGCGAAAACAGCTGGGTGTTACCAACTTATTGTGTATCCCTATCAGATGGAGGATTCCAAGCTAATGTAACCGTAGAAGGTCTGGACTTCAAGTGTTCACGTGAGGGTGATCTGTGTTCCAGTCCTAGTGAAGCAAGAGAATCGGCTGCATTGCAAATGTTGGTAAAGTTGCGGAGCATGGCTGGCCAAGCCAAAAGGTTGCAGATCAGGAACGTGAAAGGTACCAATGGTCAAATGGAATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DND1_DSRM

Protein Analysis

742

Amino Acids

82.15

Weight (kDa)

6.5

Isoelectric Point (pI)

45.43

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF7913	PF25500	6 - 124	2.1e-55	Domain of unknown function (DUF7913)
DUF7915	PF25502	162 - 310	7.1e-63	Domain of unknown function (DUF7915)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0004671)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G05950 AT1G05950 AT1G05950 AT1G05950 AT1G05950
fragaria_vesca	FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700 FvH4_4g10700
malus_domestica	MD04G1007700.v1.1
prunus_persica	Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1 Prupe.1G191700_v2.0.a1
rosa_chinensis	RchiOBHm_Chr4g0407011
rosa_laevigata	RLG00000008744
rosa_multiflora	Rmu_sc0000600.1_g000013
rosa_roxburghii	Rroxscaffold_5G00351720
rosa_rugosa	Rorug04G0076500 Rorug04G0076600 Rorug04G0076700
rosa_samantha	Rh4AG142000 Rh4BG139200 Rh4CG148600 Rh4DG136200
rosa_wichuraiana	Rw4G011570

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1793
Acc65I	GGTACC	1 cut(s)	2207
AccB1I	GGYRCC	1 cut(s)	2207
AccB7I	CCANNNNNTGG	2 cut(s)	1113, 1972
AccBSI	CCGCTC	1 cut(s)	971
AccII	CGCG	1 cut(s)	852
AciI	CCGC	5 cut(s)	94, 850, 852, 971, 2158
AclWI	GGATC	2 cut(s)	243, 1083
AcoI	YGGCCR	2 cut(s)	404, 2170
AcsI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
AcuI	CTGAAG	1 cut(s)	1458
AcvI	CACGTG	1 cut(s)	2087
AfaI	GTAC	3 cut(s)	766, 881, 2209
AfiI	CCNNNNNNNGG	4 cut(s)	602, 855, 1113, 1972
AflIII	ACRYGT	1 cut(s)	562
AhdI	GACNNNNNGTC	1 cut(s)	1324
AhlI	ACTAGT	1 cut(s)	626
AjnI	CCWGG	4 cut(s)	486, 822, 1021, 1965
Alw21I	GWGCWC	1 cut(s)	388
Alw26I	GTCTC	5 cut(s)	1053, 1179, 1332, 1604, 1836
AlwI	GGATC	2 cut(s)	243, 1083
AlwNI	CAGNNNCTG	1 cut(s)	1691
AoxI	GGCC	3 cut(s)	404, 1451, 2170
ApeKI	GCWGC	2 cut(s)	740, 2132
ApoI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
Asp700I	GAANNNNTTC	1 cut(s)	595
Asp718I	GGTACC	1 cut(s)	2207
AspLEI	GCGC	1 cut(s)	1743
AspS9I	GGNCC	4 cut(s)	52, 827, 1002, 1451
AsuHPI	GGTGA	4 cut(s)	296, 794, 1814, 2105
AsuNHI	GCTAGC	2 cut(s)	253, 989
AvaII	GGWCC	3 cut(s)	52, 827, 1002
BaeI	ACNNNNGTAYC	2 cut(s)	1398, 1431
BalI	TGGCCA	2 cut(s)	406, 2172
BanI	GGYRCC	1 cut(s)	2207
BbrPI	CACGTG	1 cut(s)	2087
BbsI	GAAGAC	1 cut(s)	1191
Bbv12I	GWGCWC	1 cut(s)	388
BbvI	GCAGC	2 cut(s)	727, 2119
BccI	CCATC	6 cut(s)	112, 396, 1802, 1847, 1970, 2027
BceAI	ACGGC	1 cut(s)	20
BcgI	CGANNNNNNTGC	2 cut(s)	2109, 2143
BciT130I	CCWGG	4 cut(s)	488, 824, 1023, 1967
BciVI	GTATCC	2 cut(s)	91, 2032
BclI	TGATCA	1 cut(s)	301
BcoDI	GTCTC	5 cut(s)	1053, 1179, 1332, 1604, 1836
BcuI	ACTAGT	1 cut(s)	626
BfaI	CTAG	7 cut(s)	194, 254, 627, 965, 990, 1889, 2112
BfmI	CTRYAG	2 cut(s)	666, 1649
BfuI	GTATCC	2 cut(s)	91, 2032
BglI	GCCNNNNNGGC	1 cut(s)	41
BglII	AGATCT	1 cut(s)	1150
BisI	GCNGC	3 cut(s)	741, 853, 2133
BlpI	GCTNAGC	1 cut(s)	1813
BlsI	GCNGC	3 cut(s)	742, 854, 2134
BmcAI	AGTACT	1 cut(s)	881
Bme1390I	CCNGG	4 cut(s)	488, 824, 1023, 1967
Bme18I	GGWCC	3 cut(s)	52, 827, 1002
BmeRI	GACNNNNNGTC	1 cut(s)	1324
BmgT120I	GGNCC	4 cut(s)	52, 827, 1002, 1451
BmiI	GGNNCC	3 cut(s)	828, 1488, 2209
BmrFI	CCNGG	4 cut(s)	488, 824, 1023, 1967
BmsI	GCATC	3 cut(s)	22, 361, 383
BmtI	GCTAGC	2 cut(s)	257, 993
BpiI	GAAGAC	1 cut(s)	1191
BplI	GAGNNNNNCTC	2 cut(s)	1886, 1918
BpmI	CTGGAG	1 cut(s)	806
Bpu1102I	GCTNAGC	1 cut(s)	1813
BsaAI	YACGTR	1 cut(s)	2087
BsaBI	GATNNNNATC	1 cut(s)	1857
BsaI	GGTCTC	1 cut(s)	1179
BsaJI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
BsaWI	WCCGGW	1 cut(s)	1620
Bsc4I	CCNNNNNNNGG	4 cut(s)	602, 855, 1113, 1972
Bse1I	ACTGG	4 cut(s)	592, 645, 923, 2106
Bse3DI	GCAATG	2 cut(s)	188, 2135
Bse8I	GATNNNNATC	1 cut(s)	1857
BseBI	CCWGG	4 cut(s)	488, 824, 1023, 1967
BseDI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
BseGI	GGATG	6 cut(s)	37, 374, 407, 1142, 1759, 1981
BseJI	GATNNNNATC	1 cut(s)	1857
BseLI	CCNNNNNNNGG	4 cut(s)	602, 855, 1113, 1972
BseMI	GCAATG	2 cut(s)	188, 2135
BseMII	CTCAG	7 cut(s)	387, 651, 894, 1190, 1469, 1602, 1827
BseNI	ACTGG	4 cut(s)	592, 645, 923, 2106
BseRI	GAGGAG	2 cut(s)	618, 1058
BseXI	GCAGC	2 cut(s)	727, 2119
BseYI	CCCAGC	1 cut(s)	1998
Bsh1236I	CGCG	1 cut(s)	852
BshFI	GGCC	3 cut(s)	406, 1453, 2172
BshNI	GGYRCC	1 cut(s)	2207
BsiHKAI	GWGCWC	1 cut(s)	388
BsiSI	CCGG	1 cut(s)	1621
BslFI	GGGAC	1 cut(s)	1233
BslI	CCNNNNNNNGG	4 cut(s)	602, 855, 1113, 1972
BsmAI	GTCTC	5 cut(s)	1053, 1179, 1332, 1604, 1836
BsmFI	GGGAC	1 cut(s)	1233
BsmI	GAATGC	2 cut(s)	1282, 1904
BsnI	GGCC	3 cut(s)	406, 1453, 2172
Bso31I	GGTCTC	1 cut(s)	1179
Bsp1286I	GDGCHC	1 cut(s)	388
Bsp143I	GATC	9 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2095, 2190
Bsp1720I	GCTNAGC	1 cut(s)	1813
Bsp19I	CCATGG	3 cut(s)	378, 1203, 1482
BspACI	CCGC	5 cut(s)	94, 850, 852, 971, 2158
BspANI	GGCC	3 cut(s)	406, 1453, 2172
BspCNI	CTCAG	7 cut(s)	388, 652, 895, 1189, 1468, 1601, 1826
BspFNI	CGCG	1 cut(s)	852
BspLI	GGNNCC	3 cut(s)	828, 1488, 2209
BspOI	GCTAGC	2 cut(s)	257, 993
BspPI	GGATC	2 cut(s)	243, 1083
BspQI	GCTCTTC	1 cut(s)	1909
BspT107I	GGYRCC	1 cut(s)	2207
BspTNI	GGTCTC	1 cut(s)	1179
BsrBI	CCGCTC	1 cut(s)	971
BsrDI	GCAATG	2 cut(s)	188, 2135
BsrI	ACTGG	4 cut(s)	592, 645, 923, 2106
BssECI	CCNNGG	9 cut(s)	27, 378, 486, 487, 611, 823, 850, 1203, 1482
BssMI	GATC	9 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2095, 2190
BssT1I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
Bst2UI	CCWGG	4 cut(s)	488, 824, 1023, 1967
Bst4CI	ACNGT	8 cut(s)	424, 536, 862, 871, 1414, 1478, 1615, 2059
Bst6I	CTCTTC	3 cut(s)	1887, 1909, 1919
BstAPI	GCANNNNNTGC	1 cut(s)	1986
BstBAI	YACGTR	1 cut(s)	2087
BstC8I	GCNNGC	5 cut(s)	144, 255, 991, 1761, 2170
BstDEI	CTNAG	8 cut(s)	396, 660, 903, 1176, 1455, 1588, 1813, 1862
BstDSI	CCRYGG	4 cut(s)	378, 850, 1203, 1482
BstENI	CCTNNNNNAGG	1 cut(s)	600
BstF5I	GGATG	6 cut(s)	37, 374, 407, 1142, 1759, 1981
BstFNI	CGCG	1 cut(s)	852
BstHHI	GCGC	1 cut(s)	1743
BstKTI	GATC	9 cut(s)	238, 304, 532, 688, 1078, 1153, 1391, 2098, 2193
BstMAI	GTCTC	5 cut(s)	1053, 1179, 1332, 1604, 1836
BstMBI	GATC	9 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2095, 2190
BstMWI	GCNNNNNNNGC	7 cut(s)	41, 254, 650, 1986, 1995, 2169, 2174
BstNI	CCWGG	4 cut(s)	488, 824, 1023, 1967
BstNSI	RCATGY	4 cut(s)	146, 351, 566, 1282
BstSCI	CCNGG	4 cut(s)	486, 822, 1021, 1965
BstSFI	CTRYAG	2 cut(s)	666, 1649
BstUI	CGCG	1 cut(s)	852
BstV1I	GCAGC	2 cut(s)	727, 2119
BstV2I	GAAGAC	1 cut(s)	1191
BstX2I	RGATCY	3 cut(s)	235, 1075, 1150
BstYI	RGATCY	3 cut(s)	235, 1075, 1150
BsuI	GTATCC	2 cut(s)	91, 2032
BsuRI	GGCC	3 cut(s)	406, 1453, 2172
BtgI	CCRYGG	4 cut(s)	378, 850, 1203, 1482
BtsCI	GGATG	6 cut(s)	37, 374, 407, 1142, 1759, 1981
BtsI	GCAGTG	2 cut(s)	1138, 1883
BtsIMutI	CAGTG	7 cut(s)	393, 507, 585, 767, 1138, 1410, 1883
Cac8I	GCNNGC	5 cut(s)	144, 255, 991, 1761, 2170
CaiI	CAGNNNCTG	1 cut(s)	1691
CfoI	GCGC	1 cut(s)	1743
Cfr13I	GGNCC	4 cut(s)	52, 827, 1002, 1451
Cfr42I	CCGCGG	1 cut(s)	853
Csp6I	GTAC	3 cut(s)	765, 880, 2208
CviQI	GTAC	3 cut(s)	765, 880, 2208
DdeI	CTNAG	8 cut(s)	396, 660, 903, 1176, 1455, 1588, 1813, 1862
DpnI	GATC	9 cut(s)	237, 303, 531, 687, 1077, 1152, 1390, 2097, 2192
DpnII	GATC	9 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2095, 2190
DriI	GACNNNNNGTC	1 cut(s)	1324
EaeI	YGGCCR	2 cut(s)	404, 2170
Eam1104I	CTCTTC	3 cut(s)	1887, 1909, 1919
Eam1105I	GACNNNNNGTC	1 cut(s)	1324
EarI	CTCTTC	3 cut(s)	1887, 1909, 1919
Eco130I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
Eco31I	GGTCTC	1 cut(s)	1179
Eco32I	GATATC	2 cut(s)	1780, 1859
Eco47I	GGWCC	3 cut(s)	52, 827, 1002
Eco57I	CTGAAG	1 cut(s)	1458
Eco72I	CACGTG	1 cut(s)	2087
EcoNI	CCTNNNNNAGG	1 cut(s)	600
EcoO109I	RGGNCCY	1 cut(s)	827
EcoRI	GAATTC	2 cut(s)	844, 935
EcoRII	CCWGG	4 cut(s)	486, 822, 1021, 1965
EcoRV	GATATC	2 cut(s)	1780, 1859
EcoT14I	CCWWGG	4 cut(s)	378, 611, 1203, 1482
EcoT22I	ATGCAT	2 cut(s)	376, 1284
ErhI	CCWWGG	4 cut(s)	378, 611, 1203, 1482
FaqI	GGGAC	1 cut(s)	1233
FauI	CCCGC	3 cut(s)	87, 857, 964
FauNDI	CATATG	2 cut(s)	261, 1982
FbaI	TGATCA	1 cut(s)	301
Fnu4HI	GCNGC	3 cut(s)	741, 853, 2133
FokI	GGATG	6 cut(s)	44, 361, 414, 1149, 1766, 1988
Fsp4HI	GCNGC	3 cut(s)	741, 853, 2133
FspBI	CTAG	7 cut(s)	194, 254, 627, 965, 990, 1889, 2112
GlaI	GCGC	1 cut(s)	1742
GluI	GCNGC	3 cut(s)	741, 853, 2133
GsaI	CCCAGC	1 cut(s)	2002
GsuI	CTGGAG	1 cut(s)	806
HaeIII	GGCC	3 cut(s)	406, 1453, 2172
HapII	CCGG	1 cut(s)	1621
HhaI	GCGC	1 cut(s)	1743
Hin6I	GCGC	1 cut(s)	1741
HinP1I	GCGC	1 cut(s)	1741
HincII	GTYRAC	2 cut(s)	64, 436
HindII	GTYRAC	2 cut(s)	64, 436
HindIII	AAGCTT	1 cut(s)	1440
HpaII	CCGG	1 cut(s)	1621
HphI	GGTGA	4 cut(s)	296, 794, 1814, 2105
Hpy166II	GTNNAC	6 cut(s)	64, 436, 568, 765, 1618, 2084
Hpy188III	TCNNGA	9 cut(s)	305, 600, 1040, 1178, 1345, 1783, 1918, 2069, 2194
Hpy8I	GTNNAC	6 cut(s)	64, 436, 568, 765, 1618, 2084
HpyAV	CCTTC	7 cut(s)	439, 606, 1023, 1213, 1597, 1835, 2057
HpyCH4III	ACNGT	8 cut(s)	424, 536, 862, 871, 1414, 1478, 1615, 2059
HpyCH4IV	ACGT	2 cut(s)	2086, 2199
HpyF10VI	GCNNNNNNNGC	7 cut(s)	41, 254, 650, 1986, 1995, 2169, 2174
HpyF3I	CTNAG	8 cut(s)	396, 660, 903, 1176, 1455, 1588, 1813, 1862
HpySE526I	ACGT	2 cut(s)	2086, 2199
HspAI	GCGC	1 cut(s)	1741
KpnI	GGTACC	1 cut(s)	2211
Ksp22I	TGATCA	1 cut(s)	301
KspI	CCGCGG	1 cut(s)	853
Kzo9I	GATC	9 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2095, 2190
LguI	GCTCTTC	1 cut(s)	1909
LmnI	GCTCC	4 cut(s)	391, 968, 1117, 2160
Lsp1109I	GCAGC	2 cut(s)	727, 2119
LweI	GCATC	3 cut(s)	22, 361, 383
MaeI	CTAG	7 cut(s)	194, 254, 627, 965, 990, 1889, 2112
MaeII	ACGT	2 cut(s)	2086, 2199
MaeIII	GTNAC	7 cut(s)	322, 418, 583, 835, 862, 2004, 2053
MalI	GATC	9 cut(s)	237, 303, 531, 687, 1077, 1152, 1390, 2097, 2192
MbiI	CCGCTC	1 cut(s)	971
MboI	GATC	9 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2095, 2190
MboII	GAAGA	9 cut(s)	78, 554, 680, 1191, 1228, 1817, 1896, 1904, 1936
MflI	RGATCY	3 cut(s)	235, 1075, 1150
MhlI	GDGCHC	1 cut(s)	388
MlsI	TGGCCA	2 cut(s)	406, 2172
MluNI	TGGCCA	2 cut(s)	406, 2172
MlyI	GAGTC	5 cut(s)	431, 591, 1055, 1838, 1870
MmeI	TCCRAC	3 cut(s)	47, 939, 1170
Mox20I	TGGCCA	2 cut(s)	406, 2172
Mph1103I	ATGCAT	2 cut(s)	376, 1284
MroXI	GAANNNNTTC	1 cut(s)	595
MscI	TGGCCA	2 cut(s)	406, 2172
MseI	TTAA	4 cut(s)	210, 557, 801, 1734
MslI	CAYNNNNRTG	1 cut(s)	1272
Msp20I	TGGCCA	2 cut(s)	406, 2172
MspA1I	CMGCKG	3 cut(s)	740, 852, 1998
MspI	CCGG	1 cut(s)	1621
MspR9I	CCNGG	4 cut(s)	488, 824, 1023, 1967
Mva1269I	GAATGC	2 cut(s)	1282, 1904
MvaI	CCWGG	4 cut(s)	488, 824, 1023, 1967
MvnI	CGCG	1 cut(s)	852
MwoI	GCNNNNNNNGC	7 cut(s)	41, 254, 650, 1986, 1995, 2169, 2174
NcoI	CCATGG	3 cut(s)	378, 1203, 1482
NdeI	CATATG	2 cut(s)	261, 1982
NdeII	GATC	9 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2095, 2190
NheI	GCTAGC	2 cut(s)	253, 989
NlaIV	GGNNCC	3 cut(s)	828, 1488, 2209
NmuCI	GTSAC	2 cut(s)	583, 835
NsiI	ATGCAT	2 cut(s)	376, 1284
NspI	RCATGY	4 cut(s)	146, 351, 566, 1282
PaeI	GCATGC	1 cut(s)	146
PasI	CCCWGGG	1 cut(s)	487
PciI	ACATGT	1 cut(s)	562
PciSI	GCTCTTC	1 cut(s)	1909
PctI	GAATGC	2 cut(s)	1282, 1904
PdmI	GAANNNNTTC	1 cut(s)	595
PfeI	GAWTC	5 cut(s)	956, 1567, 1957, 2040, 2126
PflMI	CCANNNNNTGG	2 cut(s)	1113, 1972
PkrI	GCNGC	3 cut(s)	742, 854, 2134
PleI	GAGTC	5 cut(s)	431, 590, 1054, 1837, 1870
PmaCI	CACGTG	1 cut(s)	2087
PmlI	CACGTG	1 cut(s)	2087
PpsI	GAGTC	5 cut(s)	431, 590, 1054, 1837, 1870
Ppu21I	YACGTR	1 cut(s)	2087
PpuMI	RGGWCCY	1 cut(s)	827
PscI	ACATGT	1 cut(s)	562
PsiI	TTATAA	1 cut(s)	1793
Psp5II	RGGWCCY	1 cut(s)	827
Psp6I	CCWGG	4 cut(s)	486, 822, 1021, 1965
PspCI	CACGTG	1 cut(s)	2087
PspFI	CCCAGC	1 cut(s)	1998
PspGI	CCWGG	4 cut(s)	486, 822, 1021, 1965
PspN4I	GGNNCC	3 cut(s)	828, 1488, 2209
PspPI	GGNCC	4 cut(s)	52, 827, 1002, 1451
PspPPI	RGGWCCY	1 cut(s)	827
PstNI	CAGNNNCTG	1 cut(s)	1691
PsuI	RGATCY	3 cut(s)	235, 1075, 1150
PvuII	CAGCTG	2 cut(s)	740, 1998
RsaI	GTAC	3 cut(s)	766, 881, 2209
RsaNI	GTAC	3 cut(s)	765, 880, 2208
RseI	CAYNNNNRTG	1 cut(s)	1272
SacII	CCGCGG	1 cut(s)	853
SapI	GCTCTTC	1 cut(s)	1909
SaqAI	TTAA	4 cut(s)	210, 557, 801, 1734
SatI	GCNGC	3 cut(s)	741, 853, 2133
Sau3AI	GATC	9 cut(s)	235, 301, 529, 685, 1075, 1150, 1388, 2095, 2190
Sau96I	GGNCC	4 cut(s)	52, 827, 1002, 1451
ScaI	AGTACT	1 cut(s)	881
SchI	GAGTC	5 cut(s)	431, 591, 1055, 1838, 1870
ScrFI	CCNGG	4 cut(s)	488, 824, 1023, 1967
SduI	GDGCHC	1 cut(s)	388
SfaNI	GCATC	3 cut(s)	22, 361, 383
SfcI	CTRYAG	2 cut(s)	666, 1649
Sfr303I	CCGCGG	1 cut(s)	853
SgrBI	CCGCGG	1 cut(s)	853
SinI	GGWCC	3 cut(s)	52, 827, 1002
SmiMI	CAYNNNNRTG	1 cut(s)	1272
SpeI	ACTAGT	1 cut(s)	626
SphI	GCATGC	1 cut(s)	146
SsiI	CCGC	5 cut(s)	94, 850, 852, 971, 2158
SspMI	CTAG	7 cut(s)	194, 254, 627, 965, 990, 1889, 2112
StyD4I	CCNGG	4 cut(s)	486, 822, 1021, 1965
StyI	CCWWGG	4 cut(s)	378, 611, 1203, 1482
TaaI	ACNGT	8 cut(s)	424, 536, 862, 871, 1414, 1478, 1615, 2059
TaiI	ACGT	2 cut(s)	2089, 2202
TaqI	TCGA	4 cut(s)	1214, 1293, 1387, 1565
TaqII	GACCGA	1 cut(s)	1019
TatI	WGTACW	1 cut(s)	879
TauI	GCSGC	1 cut(s)	855
TfiI	GAWTC	5 cut(s)	956, 1567, 1957, 2040, 2126
Tru1I	TTAA	4 cut(s)	210, 557, 801, 1734
Tru9I	TTAA	4 cut(s)	210, 557, 801, 1734
TscAI	CASTG	7 cut(s)	400, 507, 592, 767, 1138, 1417, 1890
TseFI	GTSAC	2 cut(s)	583, 835
TseI	GCWGC	2 cut(s)	740, 2132
Tsp45I	GTSAC	2 cut(s)	583, 835
TspDTI	ATGAA	6 cut(s)	278, 287, 636, 914, 1724, 1884
TspRI	CASTG	7 cut(s)	400, 507, 592, 767, 1138, 1417, 1890
Van91I	CCANNNNNTGG	2 cut(s)	1113, 1972
VpaK11BI	GGWCC	3 cut(s)	52, 827, 1002
XagI	CCTNNNNNAGG	1 cut(s)	600
XapI	RAATTY	9 cut(s)	266, 514, 844, 935, 1026, 1096, 1227, 1239, 1518
XceI	RCATGY	4 cut(s)	146, 351, 566, 1282
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1973, 2218
XmnI	GAANNNNTTC	1 cut(s)	595
XspI	CTAG	7 cut(s)	194, 254, 627, 965, 990, 1889, 2112
ZrmI	AGTACT	1 cut(s)	881
Zsp2I	ATGCAT	2 cut(s)	376, 1284

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.