ATPase family associated with various cellular activities (AAA)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT3G04340 |
| fragaria_vesca | FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 FvH4_6g01550 |
| malus_domestica | MD04G1232400.v1.1 |
| prunus_persica | Prupe.6G352000_v2.0.a1 |
| pyrus_communis | pycom04g20580 |
| rosa_chinensis | RchiOBHm_Chr3g0449311 |
| rosa_laevigata | RLG00000025840 |
| rosa_multiflora | Rmu_sc0007719.1_g000003 |
| rosa_roxburghii | Rroxscaffold_6G00427310 |
| rosa_rugosa | Rorug02G0619600 |
| rosa_samantha | Rh3AG017600 Rh3BG017700 Rh3CG016700 Rh3DG018000 |
| rosa_wichuraiana | Rw1G017600 Rw3G001350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3543 |
| AarI | CACCTGC | 2 cut(s) | 166, 457 |
| Acc36I | ACCTGC | 5 cut(s) | 166, 457, 2827, 3012, 3113 |
| Acc65I | GGTACC | 1 cut(s) | 2815 |
| AccB1I | GGYRCC | 4 cut(s) | 2255, 2344, 2446, 2815 |
| AccBSI | CCGCTC | 1 cut(s) | 359 |
| AccI | GTMKAC | 3 cut(s) | 2757, 3168, 3464 |
| AccII | CGCG | 8 cut(s) | 79, 164, 191, 236, 245, 308, 2262, 3129 |
| AclWI | GGATC | 7 cut(s) | 1576, 1589, 2015, 2102, 2532, 3517, 3639 |
| AcoI | YGGCCR | 2 cut(s) | 224, 1272 |
| AcsI | RAATTY | 5 cut(s) | 97, 1049, 1600, 1706, 2501 |
| AcuI | CTGAAG | 3 cut(s) | 1121, 1994, 3348 |
| AcvI | CACGTG | 1 cut(s) | 2120 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 594, 2640, 3340 |
| AflIII | ACRYGT | 1 cut(s) | 2117 |
| AjnI | CCWGG | 2 cut(s) | 2233, 2644 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 3083, 3115 |
| Alw21I | GWGCWC | 3 cut(s) | 186, 2745, 3700 |
| Alw26I | GTCTC | 8 cut(s) | 326, 704, 1029, 1390, 1641, 3086, 3137, 3704 |
| AlwI | GGATC | 7 cut(s) | 1576, 1589, 2015, 2102, 2532, 3517, 3639 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1370, 3755 |
| Ama87I | CYCGRG | 1 cut(s) | 2268 |
| AoxI | GGCC | 9 cut(s) | 224, 985, 1171, 1272, 1805, 2006, 2642, 2678, 2795 |
| ApoI | RAATTY | 5 cut(s) | 97, 1049, 1600, 1706, 2501 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1238, 1270 |
| AsiSI | GCGATCGC | 1 cut(s) | 234 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1290 |
| Asp718I | GGTACC | 1 cut(s) | 2815 |
| AspLEI | GCGC | 2 cut(s) | 81, 2264 |
| AspS9I | GGNCC | 6 cut(s) | 516, 941, 1300, 1360, 2006, 3422 |
| AsuII | TTCGAA | 1 cut(s) | 1503 |
| AvaI | CYCGRG | 1 cut(s) | 2268 |
| AvaII | GGWCC | 5 cut(s) | 516, 941, 1300, 1360, 3422 |
| AxyI | CCTNAGG | 1 cut(s) | 1809 |
| BaeGI | GKGCMC | 1 cut(s) | 2260 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1659, 1692 |
| BalI | TGGCCA | 1 cut(s) | 1274 |
| BamHI | GGATCC | 1 cut(s) | 1581 |
| BanI | GGYRCC | 4 cut(s) | 2255, 2344, 2446, 2815 |
| BanII | GRGCYC | 2 cut(s) | 2745, 3700 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2655, 2687 |
| BbrPI | CACGTG | 1 cut(s) | 2120 |
| BbsI | GAAGAC | 3 cut(s) | 1251, 1670, 3006 |
| Bbv12I | GWGCWC | 3 cut(s) | 186, 2745, 3700 |
| BccI | CCATC | 9 cut(s) | 616, 1517, 1792, 2558, 2576, 2590, 3394, 3570, 3583 |
| BceAI | ACGGC | 2 cut(s) | 351, 1367 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 193, 227, 2839, 2873 |
| BciT130I | CCWGG | 2 cut(s) | 2235, 2646 |
| BciVI | GTATCC | 2 cut(s) | 1779, 1937 |
| BclI | TGATCA | 1 cut(s) | 1819 |
| BcoDI | GTCTC | 8 cut(s) | 326, 704, 1029, 1390, 1641, 3086, 3137, 3704 |
| BfaI | CTAG | 4 cut(s) | 369, 2315, 2340, 3635 |
| BfmI | CTRYAG | 6 cut(s) | 1007, 2325, 2799, 2881, 3005, 3120 |
| BfuAI | ACCTGC | 5 cut(s) | 166, 457, 2827, 3012, 3113 |
| BfuI | GTATCC | 2 cut(s) | 1779, 1937 |
| BlpI | GCTNAGC | 1 cut(s) | 2954 |
| Bme1390I | CCNGG | 2 cut(s) | 2235, 2646 |
| Bme18I | GGWCC | 5 cut(s) | 516, 941, 1300, 1360, 3422 |
| BmeT110I | CYCGRG | 1 cut(s) | 2268 |
| BmgT120I | GGNCC | 6 cut(s) | 516, 941, 1300, 1360, 2006, 3422 |
| BmrFI | CCNGG | 2 cut(s) | 2235, 2646 |
| BmrI | ACTGGG | 1 cut(s) | 1358 |
| BmsI | GCATC | 5 cut(s) | 101, 213, 2414, 2620, 2831 |
| BmuI | ACTGGG | 1 cut(s) | 1358 |
| BpiI | GAAGAC | 3 cut(s) | 1251, 1670, 3006 |
| BpmI | CTGGAG | 6 cut(s) | 99, 350, 2256, 2782, 3203, 3714 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1215 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2954 |
| Bpu14I | TTCGAA | 1 cut(s) | 1503 |
| BpuEI | CTTGAG | 8 cut(s) | 1010, 1433, 2319, 2352, 2600, 2670, 3098, 3626 |
| Bsa29I | ATCGAT | 1 cut(s) | 2748 |
| BsaAI | YACGTR | 2 cut(s) | 1270, 2120 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1580 |
| BsaI | GGTCTC | 2 cut(s) | 3086, 3137 |
| BsaJI | CCNNGG | 4 cut(s) | 189, 1186, 2267, 3225 |
| BsaWI | WCCGGW | 1 cut(s) | 587 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 594, 2640, 3340 |
| Bse118I | RCCGGY | 1 cut(s) | 226 |
| Bse1I | ACTGG | 5 cut(s) | 1364, 1401, 2325, 2611, 2765 |
| Bse21I | CCTNAGG | 1 cut(s) | 1809 |
| Bse3DI | GCAATG | 5 cut(s) | 1440, 3055, 3135, 3312, 3463 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1580 |
| BseBI | CCWGG | 2 cut(s) | 2235, 2646 |
| BseCI | ATCGAT | 1 cut(s) | 2748 |
| BseDI | CCNNGG | 4 cut(s) | 189, 1186, 2267, 3225 |
| BseGI | GGATG | 8 cut(s) | 627, 697, 1137, 1803, 1900, 3215, 3405, 3748 |
| BseJI | GATNNNNATC | 1 cut(s) | 1580 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 594, 2640, 3340 |
| BseMI | GCAATG | 5 cut(s) | 1440, 3055, 3135, 3312, 3463 |
| BseMII | CTCAG | 4 cut(s) | 1011, 1584, 1800, 1851 |
| BseNI | ACTGG | 5 cut(s) | 1364, 1401, 2325, 2611, 2765 |
| BseSI | GKGCMC | 1 cut(s) | 2260 |
| BseX3I | CGGCCG | 1 cut(s) | 224 |
| BsgI | GTGCAG | 2 cut(s) | 485, 797 |
| Bsh1236I | CGCG | 8 cut(s) | 79, 164, 191, 236, 245, 308, 2262, 3129 |
| Bsh1285I | CGRYCG | 3 cut(s) | 168, 227, 234 |
| BshFI | GGCC | 9 cut(s) | 226, 987, 1173, 1274, 1807, 2008, 2644, 2680, 2797 |
| BshNI | GGYRCC | 4 cut(s) | 2255, 2344, 2446, 2815 |
| BshVI | ATCGAT | 1 cut(s) | 2748 |
| BsiEI | CGRYCG | 3 cut(s) | 168, 227, 234 |
| BsiHKAI | GWGCWC | 3 cut(s) | 186, 2745, 3700 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2268 |
| BsiSI | CCGG | 3 cut(s) | 223, 227, 588 |
| BslFI | GGGAC | 4 cut(s) | 9, 954, 1142, 3435 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 594, 2640, 3340 |
| BsmAI | GTCTC | 8 cut(s) | 326, 704, 1029, 1390, 1641, 3086, 3137, 3704 |
| BsmBI | CGTCTC | 3 cut(s) | 326, 704, 1390 |
| BsmFI | GGGAC | 4 cut(s) | 9, 954, 1142, 3435 |
| BsnI | GGCC | 9 cut(s) | 226, 987, 1173, 1274, 1807, 2008, 2644, 2680, 2797 |
| Bso31I | GGTCTC | 2 cut(s) | 3086, 3137 |
| BsoBI | CYCGRG | 1 cut(s) | 2268 |
| Bsp119I | TTCGAA | 1 cut(s) | 1503 |
| Bsp1286I | GDGCHC | 4 cut(s) | 186, 2260, 2745, 3700 |
| Bsp1407I | TGTACA | 4 cut(s) | 1075, 1437, 1530, 3212 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2954 |
| Bsp19I | CCATGG | 1 cut(s) | 1186 |
| BspANI | GGCC | 9 cut(s) | 226, 987, 1173, 1274, 1807, 2008, 2644, 2680, 2797 |
| BspCNI | CTCAG | 4 cut(s) | 1012, 1585, 1801, 1852 |
| BspDI | ATCGAT | 1 cut(s) | 2748 |
| BspFNI | CGCG | 8 cut(s) | 79, 164, 191, 236, 245, 308, 2262, 3129 |
| BspHI | TCATGA | 2 cut(s) | 2527, 3700 |
| BspMAI | CTGCAG | 3 cut(s) | 1011, 3009, 3124 |
| BspMI | ACCTGC | 5 cut(s) | 166, 457, 2827, 3012, 3113 |
| BspPI | GGATC | 7 cut(s) | 1576, 1589, 2015, 2102, 2532, 3517, 3639 |
| BspQI | GCTCTTC | 1 cut(s) | 1505 |
| BspT104I | TTCGAA | 1 cut(s) | 1503 |
| BspT107I | GGYRCC | 4 cut(s) | 2255, 2344, 2446, 2815 |
| BspTNI | GGTCTC | 2 cut(s) | 3086, 3137 |
| BsrBI | CCGCTC | 1 cut(s) | 359 |
| BsrDI | GCAATG | 5 cut(s) | 1440, 3055, 3135, 3312, 3463 |
| BsrFI | RCCGGY | 1 cut(s) | 226 |
| BsrGI | TGTACA | 4 cut(s) | 1075, 1437, 1530, 3212 |
| BsrI | ACTGG | 5 cut(s) | 1364, 1401, 2325, 2611, 2765 |
| BssAI | RCCGGY | 1 cut(s) | 226 |
| BssECI | CCNNGG | 4 cut(s) | 189, 1186, 2267, 3225 |
| BssT1I | CCWWGG | 2 cut(s) | 1186, 3225 |
| Bst2UI | CCWGG | 2 cut(s) | 2235, 2646 |
| Bst4CI | ACNGT | 7 cut(s) | 1266, 1627, 1791, 1933, 1993, 2885, 3757 |
| Bst6I | CTCTTC | 7 cut(s) | 44, 429, 800, 1505, 1970, 2036, 2132 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 181, 775 |
| BstAUI | TGTACA | 4 cut(s) | 1075, 1437, 1530, 3212 |
| BstBAI | YACGTR | 2 cut(s) | 1270, 2120 |
| BstBI | TTCGAA | 1 cut(s) | 1503 |
| BstC8I | GCNNGC | 9 cut(s) | 186, 228, 414, 717, 1171, 1407, 1545, 2260, 3378 |
| BstDEI | CTNAG | 6 cut(s) | 1020, 1215, 1593, 1809, 1860, 2954 |
| BstDSI | CCRYGG | 2 cut(s) | 189, 1186 |
| BstF5I | GGATG | 8 cut(s) | 627, 697, 1137, 1803, 1900, 3215, 3405, 3748 |
| BstFNI | CGCG | 8 cut(s) | 79, 164, 191, 236, 245, 308, 2262, 3129 |
| BstHHI | GCGC | 2 cut(s) | 81, 2264 |
| BstMAI | GTCTC | 8 cut(s) | 326, 704, 1029, 1390, 1641, 3086, 3137, 3704 |
| BstMCI | CGRYCG | 3 cut(s) | 168, 227, 234 |
| BstNI | CCWGG | 2 cut(s) | 2235, 2646 |
| BstNSI | RCATGY | 1 cut(s) | 1409 |
| BstSCI | CCNGG | 2 cut(s) | 2233, 2644 |
| BstSFI | CTRYAG | 6 cut(s) | 1007, 2325, 2799, 2881, 3005, 3120 |
| BstSLI | GKGCMC | 1 cut(s) | 2260 |
| BstUI | CGCG | 8 cut(s) | 79, 164, 191, 236, 245, 308, 2262, 3129 |
| BstV2I | GAAGAC | 3 cut(s) | 1251, 1670, 3006 |
| BstX2I | RGATCY | 3 cut(s) | 1581, 3522, 3631 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2443, 3195 |
| BstYI | RGATCY | 3 cut(s) | 1581, 3522, 3631 |
| BstZI | CGGCCG | 1 cut(s) | 224 |
| Bsu15I | ATCGAT | 1 cut(s) | 2748 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1809 |
| BsuI | GTATCC | 2 cut(s) | 1779, 1937 |
| BsuRI | GGCC | 9 cut(s) | 226, 987, 1173, 1274, 1807, 2008, 2644, 2680, 2797 |
| BsuTUI | ATCGAT | 1 cut(s) | 2748 |
| BtgI | CCRYGG | 2 cut(s) | 189, 1186 |
| BtgZI | GCGATG | 1 cut(s) | 1071 |
| BtsCI | GGATG | 8 cut(s) | 627, 697, 1137, 1803, 1900, 3215, 3405, 3748 |
| BtsIMutI | CAGTG | 4 cut(s) | 1371, 2016, 2318, 3753 |
| BveI | ACCTGC | 5 cut(s) | 166, 457, 2827, 3012, 3113 |
| Cac8I | GCNNGC | 9 cut(s) | 186, 228, 414, 717, 1171, 1407, 1545, 2260, 3378 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1370, 3755 |
| CciI | TCATGA | 2 cut(s) | 2527, 3700 |
| CfoI | GCGC | 2 cut(s) | 81, 2264 |
| Cfr10I | RCCGGY | 1 cut(s) | 226 |
| Cfr13I | GGNCC | 6 cut(s) | 516, 941, 1300, 1360, 2006, 3422 |
| Cfr42I | CCGCGG | 1 cut(s) | 192 |
| ClaI | ATCGAT | 1 cut(s) | 2748 |
| CpoI | CGGWCCG | 1 cut(s) | 516 |
| CseI | GACGC | 2 cut(s) | 721, 3450 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 159, 194 |
| CspI | CGGWCCG | 1 cut(s) | 516 |
| DdeI | CTNAG | 6 cut(s) | 1020, 1215, 1593, 1809, 1860, 2954 |
| EaeI | YGGCCR | 2 cut(s) | 224, 1272 |
| EagI | CGGCCG | 1 cut(s) | 224 |
| Eam1104I | CTCTTC | 7 cut(s) | 44, 429, 800, 1505, 1970, 2036, 2132 |
| EarI | CTCTTC | 7 cut(s) | 44, 429, 800, 1505, 1970, 2036, 2132 |
| Ecl136II | GAGCTC | 2 cut(s) | 2743, 3698 |
| EclXI | CGGCCG | 1 cut(s) | 224 |
| Eco130I | CCWWGG | 2 cut(s) | 1186, 3225 |
| Eco147I | AGGCCT | 1 cut(s) | 2797 |
| Eco24I | GRGCYC | 2 cut(s) | 2745, 3700 |
| Eco31I | GGTCTC | 2 cut(s) | 3086, 3137 |
| Eco32I | GATATC | 1 cut(s) | 1900 |
| Eco47I | GGWCC | 5 cut(s) | 516, 941, 1300, 1360, 3422 |
| Eco52I | CGGCCG | 1 cut(s) | 224 |
| Eco53kI | GAGCTC | 2 cut(s) | 2743, 3698 |
| Eco57I | CTGAAG | 3 cut(s) | 1121, 1994, 3348 |
| Eco72I | CACGTG | 1 cut(s) | 2120 |
| Eco81I | CCTNAGG | 1 cut(s) | 1809 |
| Eco88I | CYCGRG | 1 cut(s) | 2268 |
| EcoICRI | GAGCTC | 2 cut(s) | 2743, 3698 |
| EcoO109I | RGGNCCY | 2 cut(s) | 941, 3422 |
| EcoRII | CCWGG | 2 cut(s) | 2233, 2644 |
| EcoRV | GATATC | 1 cut(s) | 1900 |
| EcoT14I | CCWWGG | 2 cut(s) | 1186, 3225 |
| EcoT22I | ATGCAT | 1 cut(s) | 1657 |
| EcoT38I | GRGCYC | 2 cut(s) | 2745, 3700 |
| ErhI | CCWWGG | 2 cut(s) | 1186, 3225 |
| Esp3I | CGTCTC | 3 cut(s) | 326, 704, 1390 |
| FaqI | GGGAC | 4 cut(s) | 9, 954, 1142, 3435 |
| FauI | CCCGC | 3 cut(s) | 405, 797, 2267 |
| FauNDI | CATATG | 1 cut(s) | 3034 |
| FbaI | TGATCA | 1 cut(s) | 1819 |
| FblI | GTMKAC | 3 cut(s) | 2757, 3168, 3464 |
| FokI | GGATG | 8 cut(s) | 634, 704, 1144, 1810, 1907, 3222, 3412, 3755 |
| FriOI | GRGCYC | 2 cut(s) | 2745, 3700 |
| FspBI | CTAG | 4 cut(s) | 369, 2315, 2340, 3635 |
| GlaI | GCGC | 2 cut(s) | 80, 2263 |
| GsuI | CTGGAG | 6 cut(s) | 99, 350, 2256, 2782, 3203, 3714 |
| HaeIII | GGCC | 9 cut(s) | 226, 987, 1173, 1274, 1807, 2008, 2644, 2680, 2797 |
| HapII | CCGG | 3 cut(s) | 223, 227, 588 |
| HgaI | GACGC | 2 cut(s) | 721, 3450 |
| HhaI | GCGC | 2 cut(s) | 81, 2264 |
| Hin6I | GCGC | 2 cut(s) | 79, 2262 |
| HinP1I | GCGC | 2 cut(s) | 79, 2262 |
| HincII | GTYRAC | 5 cut(s) | 1477, 1610, 1831, 2356, 3372 |
| HindII | GTYRAC | 5 cut(s) | 1477, 1610, 1831, 2356, 3372 |
| HindIII | AAGCTT | 2 cut(s) | 842, 2532 |
| HpaI | GTTAAC | 2 cut(s) | 2356, 3372 |
| HpaII | CCGG | 3 cut(s) | 223, 227, 588 |
| Hpy188I | TCNGA | 7 cut(s) | 520, 856, 1594, 1861, 3042, 3209, 3367 |
| Hpy99I | CGWCG | 3 cut(s) | 256, 1727, 3576 |
| HpyCH4III | ACNGT | 7 cut(s) | 1266, 1627, 1791, 1933, 1993, 2885, 3757 |
| HpyCH4IV | ACGT | 4 cut(s) | 1248, 1269, 1838, 2119 |
| HpyF3I | CTNAG | 6 cut(s) | 1020, 1215, 1593, 1809, 1860, 2954 |
| HpySE526I | ACGT | 4 cut(s) | 1248, 1269, 1838, 2119 |
| HspAI | GCGC | 2 cut(s) | 79, 2262 |
| KpnI | GGTACC | 1 cut(s) | 2819 |
| KroI | GCCGGC | 1 cut(s) | 226 |
| KroNI | GCCGGC | 1 cut(s) | 228 |
| Ksp22I | TGATCA | 1 cut(s) | 1819 |
| KspAI | GTTAAC | 2 cut(s) | 2356, 3372 |
| KspI | CCGCGG | 1 cut(s) | 192 |
| LguI | GCTCTTC | 1 cut(s) | 1505 |
| LweI | GCATC | 5 cut(s) | 101, 213, 2414, 2620, 2831 |
| MaeI | CTAG | 4 cut(s) | 369, 2315, 2340, 3635 |
| MaeII | ACGT | 4 cut(s) | 1248, 1269, 1838, 2119 |
| MaeIII | GTNAC | 3 cut(s) | 133, 287, 835 |
| MbiI | CCGCTC | 1 cut(s) | 359 |
| MflI | RGATCY | 3 cut(s) | 1581, 3522, 3631 |
| MhlI | GDGCHC | 4 cut(s) | 186, 2260, 2745, 3700 |
| MlsI | TGGCCA | 1 cut(s) | 1274 |
| MluNI | TGGCCA | 1 cut(s) | 1274 |
| MlyI | GAGTC | 3 cut(s) | 1004, 1031, 1826 |
| MmeI | TCCRAC | 4 cut(s) | 624, 1583, 2355, 2808 |
| Mox20I | TGGCCA | 1 cut(s) | 1274 |
| Mph1103I | ATGCAT | 1 cut(s) | 1657 |
| MroNI | GCCGGC | 1 cut(s) | 226 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1290 |
| MscI | TGGCCA | 1 cut(s) | 1274 |
| MslI | CAYNNNNRTG | 5 cut(s) | 1538, 1733, 2462, 3456, 3495 |
| Msp20I | TGGCCA | 1 cut(s) | 1274 |
| MspA1I | CMGCKG | 1 cut(s) | 191 |
| MspI | CCGG | 3 cut(s) | 223, 227, 588 |
| MspR9I | CCNGG | 2 cut(s) | 2235, 2646 |
| MvaI | CCWGG | 2 cut(s) | 2235, 2646 |
| MvnI | CGCG | 8 cut(s) | 79, 164, 191, 236, 245, 308, 2262, 3129 |
| NaeI | GCCGGC | 1 cut(s) | 228 |
| NcoI | CCATGG | 1 cut(s) | 1186 |
| NdeI | CATATG | 1 cut(s) | 3034 |
| NgoMIV | GCCGGC | 1 cut(s) | 226 |
| NmuCI | GTSAC | 1 cut(s) | 133 |
| NsiI | ATGCAT | 1 cut(s) | 1657 |
| NspI | RCATGY | 1 cut(s) | 1409 |
| NspV | TTCGAA | 1 cut(s) | 1503 |
| PaeI | GCATGC | 1 cut(s) | 1409 |
| PagI | TCATGA | 2 cut(s) | 2527, 3700 |
| PaqCI | CACCTGC | 2 cut(s) | 166, 457 |
| PceI | AGGCCT | 1 cut(s) | 2797 |
| PciSI | GCTCTTC | 1 cut(s) | 1505 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 911, 3571 |
| PdiI | GCCGGC | 1 cut(s) | 228 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1290 |
| PfeI | GAWTC | 7 cut(s) | 157, 584, 907, 2186, 2971, 3204, 3263 |
| PflFI | GACNNNGTC | 1 cut(s) | 3715 |
| PfoI | TCCNGGA | 1 cut(s) | 2233 |
| Ple19I | CGATCG | 1 cut(s) | 234 |
| PleI | GAGTC | 3 cut(s) | 1003, 1030, 1826 |
| PmaCI | CACGTG | 1 cut(s) | 2120 |
| PmlI | CACGTG | 1 cut(s) | 2120 |
| PpsI | GAGTC | 3 cut(s) | 1003, 1030, 1826 |
| Ppu21I | YACGTR | 2 cut(s) | 1270, 2120 |
| PpuMI | RGGWCCY | 2 cut(s) | 941, 3422 |
| PsiI | TTATAA | 1 cut(s) | 3543 |
| Psp124BI | GAGCTC | 2 cut(s) | 2745, 3700 |
| Psp5II | RGGWCCY | 2 cut(s) | 941, 3422 |
| Psp6I | CCWGG | 2 cut(s) | 2233, 2644 |
| PspCI | CACGTG | 1 cut(s) | 2120 |
| PspGI | CCWGG | 2 cut(s) | 2233, 2644 |
| PspPI | GGNCC | 6 cut(s) | 516, 941, 1300, 1360, 2006, 3422 |
| PspPPI | RGGWCCY | 2 cut(s) | 941, 3422 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1977, 2009 |
| PstI | CTGCAG | 3 cut(s) | 1011, 3009, 3124 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1370, 3755 |
| PsuI | RGATCY | 3 cut(s) | 1581, 3522, 3631 |
| PsyI | GACNNNGTC | 1 cut(s) | 3715 |
| PvuI | CGATCG | 1 cut(s) | 234 |
| RgaI | GCGATCGC | 1 cut(s) | 234 |
| RseI | CAYNNNNRTG | 5 cut(s) | 1538, 1733, 2462, 3456, 3495 |
| Rsr2I | CGGWCCG | 1 cut(s) | 516 |
| RsrII | CGGWCCG | 1 cut(s) | 516 |
| SacI | GAGCTC | 2 cut(s) | 2745, 3700 |
| SacII | CCGCGG | 1 cut(s) | 192 |
| SapI | GCTCTTC | 1 cut(s) | 1505 |
| Sau96I | GGNCC | 6 cut(s) | 516, 941, 1300, 1360, 2006, 3422 |
| SchI | GAGTC | 3 cut(s) | 1004, 1031, 1826 |
| ScrFI | CCNGG | 2 cut(s) | 2235, 2646 |
| SduI | GDGCHC | 4 cut(s) | 186, 2260, 2745, 3700 |
| SfaAI | GCGATCGC | 1 cut(s) | 234 |
| SfaNI | GCATC | 5 cut(s) | 101, 213, 2414, 2620, 2831 |
| SfcI | CTRYAG | 6 cut(s) | 1007, 2325, 2799, 2881, 3005, 3120 |
| Sfr303I | CCGCGG | 1 cut(s) | 192 |
| SfuI | TTCGAA | 1 cut(s) | 1503 |
| SgfI | GCGATCGC | 1 cut(s) | 234 |
| SgrBI | CCGCGG | 1 cut(s) | 192 |
| SinI | GGWCC | 5 cut(s) | 516, 941, 1300, 1360, 3422 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 1538, 1733, 2462, 3456, 3495 |
| SmlI | CTYRAG | 8 cut(s) | 989, 1448, 2334, 2367, 2615, 2685, 3077, 3605 |
| SmoI | CTYRAG | 8 cut(s) | 989, 1448, 2334, 2367, 2615, 2685, 3077, 3605 |
| SphI | GCATGC | 1 cut(s) | 1409 |
| SseBI | AGGCCT | 1 cut(s) | 2797 |
| SspI | AATATT | 1 cut(s) | 1469 |
| SspMI | CTAG | 4 cut(s) | 369, 2315, 2340, 3635 |
| SstI | GAGCTC | 2 cut(s) | 2745, 3700 |
| StuI | AGGCCT | 1 cut(s) | 2797 |
| StyD4I | CCNGG | 2 cut(s) | 2233, 2644 |
| StyI | CCWWGG | 2 cut(s) | 1186, 3225 |
| TaaI | ACNGT | 7 cut(s) | 1266, 1627, 1791, 1933, 1993, 2885, 3757 |
| TaiI | ACGT | 4 cut(s) | 1251, 1272, 1841, 2122 |
| TaqI | TCGA | 8 cut(s) | 701, 1503, 2494, 2748, 2859, 3565, 3574, 3667 |
| TaqII | GACCGA | 1 cut(s) | 1317 |
| TatI | WGTACW | 4 cut(s) | 1075, 1437, 1530, 3212 |
| TauI | GCSGC | 6 cut(s) | 92, 191, 248, 260, 341, 2644 |
| TfiI | GAWTC | 7 cut(s) | 157, 584, 907, 2186, 2971, 3204, 3263 |
| TscAI | CASTG | 4 cut(s) | 1371, 2023, 2325, 3760 |
| TseFI | GTSAC | 1 cut(s) | 133 |
| Tsp45I | GTSAC | 1 cut(s) | 133 |
| TspGWI | ACGGA | 8 cut(s) | 11, 207, 240, 823, 974, 1595, 1907, 3412 |
| TspRI | CASTG | 4 cut(s) | 1371, 2023, 2325, 3760 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3715 |
| VpaK11BI | GGWCC | 5 cut(s) | 516, 941, 1300, 1360, 3422 |
| XapI | RAATTY | 5 cut(s) | 97, 1049, 1600, 1706, 2501 |
| XceI | RCATGY | 1 cut(s) | 1409 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1184 |
| XmiI | GTMKAC | 3 cut(s) | 2757, 3168, 3464 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1290 |
| XspI | CTAG | 4 cut(s) | 369, 2315, 2340, 3635 |
| Zsp2I | ATGCAT | 1 cut(s) | 1657 |