RchiOBHm_Chr3g0468541

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0014760
Physical Location & Seq
Reverse (-)
14523666 .. 14530050
6385 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2409 bp
ATGAGTGACGTCGGAGAACAGACGTGTCCGATATGCGCCGAGGAGATGGATTTGACCGATCAGCAGCTCAAGCCCTGCGAATGTGGCTATGAGGTCTGTCTGTGGTGCTGGAATCACATTATGGAGATGGCGGAGAAGGATGGAAGGGAAGGTCGGTGTCCGCTGTGCCGAACAACTTACGACAAAGAGAAGATCATGAGGGTGGCAGCAAACTGTAAAGCAGTGTTGGTGACTGAAGTTAATCAGAAGCGGAAACAGAAAAAGCCCCCCAAGGGACCTGAAGCAAAGAAGCATCTCACTGATGTTAGAGTTCTCCAACGGAATCTAGCTTACATAATTGGATTACCTCTTAACCTTGCAAAAGAAGAGCTTCTTAAGCGCAGGGACTATTTTGGCCAGTATGGAAAGGTGTTGAAGGTCTCTATTTCTCGTACATCGACTGGGGATATTCAACATGCTACTAACAACAGTTGTTGTGTGTATATAACGTACTCAAGTGAATATGAGGCAGCTCGATGTATTCAATCGGTGCACAGTTTTGTATTAGATGGTAATTCTTTGAGAGCATGTTTTGGAACCACAAAGTATTGCCATGCTTGGTTGAAAAATGTGCCTTGTAGCAATGCAGATTGTATGTATCTCCATGATTTTGGCTCTCAGGAAGATAGTTTTTCCAAAGATGAACTAGTTTCGGCCTTTGAAAGGAGTAAGGATTTACAGATTATCGGTGTTACAAATAATCTGCATCAGCGTCCAGGGAAAGGGTTACCTCCGCCAGTGGATGAGAATAGCAAATCAAAAATATCATCTGCAGCTAAACCACTTGTCAAACATCCTTTAAATATCACTAGGGATGAGTTTAAGGGATCTTGTGCGGATGAAGACTCTAGAAGAGCTACTCCTGCAAGAACTTCTTGGGTCATGCAGGTTGCCCCTAGTTTACCCCTGGGAACAAGTGCTCAAATGCCTTCCTATCAAAAGGCTGAGACCTCTAGTGATGTTCATGCTGTTTCATCAGAAGTTGTAAGTACTGAAAGTTCTAACCTCAGAGTAAGATCAATTACATCTGAAGAAAGCTGTGAAGTGCGTTTTAATAGTTTGGATCATCTGGTACCGACCAAACAGAATAGTGAAGAAACTGGTCAAGTAGCCTTATCAAATAAACCTGCAGGAGCCTTTGTAGATAGCACTCTTGTAGGTATAACTTCTGGACATTGTCTATCACCAGATAAAGGTGTTGATCGAGATATTAAATCCAGAGACTTTATAAGCAGCAGAAACTTAAATTGTCTATCACCAAACTTATCCAAAAGTTTATGTGATAACAAAGGAAGTAGCTTTGCTACATTTGATCCTTCCAGTGTGTTACCAAAGATGGGATTAGCGAAGTATTCGGAAGGGTCTGAAAACAATAAAGCCAGTATTGACTGCAATCTTTCTTCAGATTTAGGGGAGAGTGGCATAATCTCAAATATTTTGACGATGAATTTGGATGCACCTGAAGGTTCTTTAACTGAGCTTCATAATCTGGTTAATTTGTTGGGTGAAACTGATAAAGAAAGCAGTGTTCTCAGAGTACCAAGTTCAAGAAAAATGCATGAGAAAAAGCAGTCCAGGTTCTCATTTGCCCAGCAAGAGGATTCTTGTGATAATATATGGCATCCGCCCAAAGACTACTCTTCTTTATCTGATTTAAATAAGGATTCTTTCATACATGTGGGGTCTTCAAATCTTCTCAGGAGCTGTTCTTTTTTGTCTCCTAAAGCTTCAGCTACAGAAGTAGCTACTTCGATCCCACCAGGATTTTCAGTACCAAGAAGGGCATCACCTCCAGGTTTTTCTTCTCATGGGAGGTCTAGGAGGGTGGACCAGGCTTTTGACAGTTCTGTGAATCCTTTGCTGCAACCAGCTGCTATGCCCACTGGTTACTCTGGCATCACTCGCGATGCTGAGCTCTTTGAGCCATCAATTTTTGATATTGGTAATGGAATATTGGAGAGAGGGAGAGCAACTTTATCACAGTATAATTCTTCTCAGCCAGATGCAAGGCTCCATATGATGAGACAGCAGTCAACTCTTACACAGCAAAACTTAGGATTTCATGACCACTTCAGGAATACATACTCTTCCTTGCATGATGCACAACTACTTTCTCCACAGCATCCCAATCAATTTCAACCCAATCCATCTACATTTGCACAGTCCACCCCTCAACAGGTCAGTGATGTGCATGTATCAAATAGCCATTGGGTTCAATGGAATGGGGTCAAGAGTACAAGCGACCTAGGAATATCAGAATTGCTGAGAAATGAGAGACTGGGATTTAACAAATTCATTCCTTGTTATGAGGATACAAAGACTCGATCAAGTTACTTTAGCGATCTAAACAGCAAAGGGTTTGAAATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

802

Amino Acids

88.76

Weight (kDa)

6.65

Isoelectric Point (pI)

55.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_4 PF14570 9 - 61 5.7e-18 RING/Ubox like zinc-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014760)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g15190
malus_domestica MD12G1125800.v1.1
prunus_persica Prupe.6G242300_v2.0.a1 Prupe.6G242300_v2.0.a1
pyrus_communis pycom12g12400
rosa_chinensis RchiOBHm_Chr3g0468541
rosa_laevigata RLG00000024424
rosa_multiflora Rmu_sc0008735.1_g000001 Rmu_sc0009516.1_g000009
rosa_roxburghii Rroxscaffold_6G00412710
rosa_rugosa Rorug03G0095700 Rorug03G0095800 Rorug03G0095800
rosa_samantha Rh3AG144200 Rh3BG166400 Rh3DG165800
rosa_wichuraiana Rw3G013610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1268
AatII GACGTC 1 cut(s) 12
Acc36I ACCTGC 2 cut(s) 916, 1174
Acc65I GGTACC 1 cut(s) 1111
AccB1I GGYRCC 1 cut(s) 1111
AccII CGCG 1 cut(s) 1944
AciI CCGC 6 cut(s) 131, 161, 250, 773, 875, 1664
AclWI GGATC 4 cut(s) 874, 1110, 1346, 1786
AcoI YGGCCR 1 cut(s) 394
AcsI RAATTY 3 cut(s) 1486, 2330, 2403
AcuI CTGAAG 7 cut(s) 255, 300, 1089, 1425, 1521, 1752, 2095
AcyI GRCGYC 1 cut(s) 9
AfaI GTAC 7 cut(s) 433, 491, 1030, 1113, 1578, 1812, 2275
AfiI CCNNNNNNNGG 7 cut(s) 272, 702, 761, 1232, 1376, 1636, 2215
AflII CTTAAG 1 cut(s) 374
AflIII ACRYGT 2 cut(s) 23, 1714
AhlI ACTAGT 1 cut(s) 685
AjiI CACGTC 1 cut(s) 24
AjnI CCWGG 6 cut(s) 754, 945, 1613, 1798, 1831, 1869
Alw21I GWGCWC 3 cut(s) 534, 961, 1956
Alw26I GTCTC 6 cut(s) 424, 980, 1254, 1761, 2056, 2308
Alw44I GTGCAC 1 cut(s) 530
AlwI GGATC 4 cut(s) 874, 1110, 1346, 1786
AlwNI CAGNNNCTG 1 cut(s) 1743
AoxI GGCC 2 cut(s) 394, 693
ApaLI GTGCAC 1 cut(s) 530
ApeKI GCWGC 7 cut(s) 64, 206, 509, 812, 1272, 1900, 1910
ApoI RAATTY 3 cut(s) 1486, 2330, 2403
ArsI GACNNNNNNTTYG 4 cut(s) 1471, 1503, 1859, 1891
Asp700I GAANNNNTTC 1 cut(s) 369
Asp718I GGTACC 1 cut(s) 1111
AspA2I CCTAGG 1 cut(s) 2284
AspLEI GCGC 2 cut(s) 38, 381
AspS9I GGNCC 2 cut(s) 275, 1867
AsuHPI GGTGA 5 cut(s) 241, 1215, 1287, 1556, 1818
AvaII GGWCC 2 cut(s) 275, 1867
AvrII CCTAGG 1 cut(s) 2284
BaeGI GKGCMC 1 cut(s) 534
BalI TGGCCA 1 cut(s) 396
BanI GGYRCC 1 cut(s) 1111
BanII GRGCYC 1 cut(s) 1956
BbsI GAAGAC 2 cut(s) 888, 1716
Bbv12I GWGCWC 3 cut(s) 534, 961, 1956
BbvI GCAGC 7 cut(s) 76, 218, 521, 824, 1284, 1887, 1897
BccI CCATC 7 cut(s) 40, 121, 134, 542, 1369, 1972, 2194
BciT130I CCWGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
BciVI GTATCC 1 cut(s) 2344
BcoDI GTCTC 6 cut(s) 424, 980, 1254, 1761, 2056, 2308
BcuI ACTAGT 1 cut(s) 685
BfaI CTAG 8 cut(s) 326, 686, 849, 888, 936, 993, 1857, 2285
BfmI CTRYAG 3 cut(s) 810, 1167, 1773
BfrI CTTAAG 1 cut(s) 374
BfuAI ACCTGC 2 cut(s) 916, 1174
BfuI GTATCC 1 cut(s) 2344
BisI GCNGC 7 cut(s) 65, 207, 510, 813, 1273, 1901, 1911
BlnI CCTAGG 1 cut(s) 2284
BlpI GCTNAGC 1 cut(s) 1950
BlsI GCNGC 7 cut(s) 66, 208, 511, 814, 1274, 1902, 1912
BmcAI AGTACT 1 cut(s) 1030
Bme1390I CCNGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
Bme18I GGWCC 2 cut(s) 275, 1867
BmgBI CACGTC 1 cut(s) 24
BmgT120I GGNCC 2 cut(s) 275, 1867
BmiI GGNNCC 5 cut(s) 276, 577, 1113, 1174, 2051
BmrFI CCNGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
BmrI ACTGGG 2 cut(s) 450, 2327
BmuI ACTGGG 2 cut(s) 450, 2327
BoxI GACNNNNGTC 1 cut(s) 2068
BpiI GAAGAC 2 cut(s) 888, 1716
BpmI CTGGAG 1 cut(s) 1815
Bpu1102I GCTNAGC 1 cut(s) 1950
BpuEI CTTGAG 2 cut(s) 53, 478
BsaHI GRCGYC 1 cut(s) 9
BsaI GGTCTC 2 cut(s) 424, 980
BsaJI CCNNGG 6 cut(s) 39, 270, 755, 945, 946, 2284
BsaXI ACNNNNNCTCC 2 cut(s) 1164, 1194
Bsc4I CCNNNNNNNGG 7 cut(s) 272, 702, 761, 1232, 1376, 1636, 2215
Bse1I ACTGG 8 cut(s) 397, 445, 776, 1144, 1359, 1419, 1927, 2322
Bse3DI GCAATG 1 cut(s) 628
BseBI CCWGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
BseDI CCNNGG 6 cut(s) 39, 270, 755, 945, 946, 2284
BseGI GGATG 8 cut(s) 145, 787, 832, 859, 883, 1498, 1660, 2161
BseLI CCNNNNNNNGG 7 cut(s) 272, 702, 761, 1232, 1376, 1636, 2215
BseMI GCAATG 1 cut(s) 628
BseMII CTCAG 9 cut(s) 671, 975, 1060, 1506, 1585, 1750, 1941, 2048, 2294
BseNI ACTGG 8 cut(s) 397, 445, 776, 1144, 1359, 1419, 1927, 2322
BseRI GAGGAG 1 cut(s) 56
BseSI GKGCMC 1 cut(s) 534
BseXI GCAGC 7 cut(s) 76, 218, 521, 824, 1284, 1887, 1897
BseYI CCCAGC 1 cut(s) 1629
Bsh1236I CGCG 1 cut(s) 1944
BshFI GGCC 2 cut(s) 396, 695
BshNI GGYRCC 1 cut(s) 1111
BsiHKAI GWGCWC 3 cut(s) 534, 961, 1956
BslFI GGGAC 2 cut(s) 288, 398
BslI CCNNNNNNNGG 7 cut(s) 272, 702, 761, 1232, 1376, 1636, 2215
BsmAI GTCTC 6 cut(s) 424, 980, 1254, 1761, 2056, 2308
BsmFI GGGAC 2 cut(s) 288, 398
BsnI GGCC 2 cut(s) 396, 695
Bso31I GGTCTC 2 cut(s) 424, 980
Bsp1286I GDGCHC 3 cut(s) 534, 961, 1956
Bsp1720I GCTNAGC 1 cut(s) 1950
Bsp68I TCGCGA 1 cut(s) 1944
BspACI CCGC 6 cut(s) 131, 161, 250, 773, 875, 1664
BspANI GGCC 2 cut(s) 396, 695
BspCNI CTCAG 9 cut(s) 670, 976, 1059, 1507, 1584, 1749, 1942, 2047, 2295
BspFNI CGCG 1 cut(s) 1944
BspHI TCATGA 2 cut(s) 195, 2101
BspLI GGNNCC 5 cut(s) 276, 577, 1113, 1174, 2051
BspMAI CTGCAG 2 cut(s) 814, 1171
BspMI ACCTGC 2 cut(s) 916, 1174
BspPI GGATC 4 cut(s) 874, 1110, 1346, 1786
BspQI GCTCTTC 2 cut(s) 360, 886
BspT107I GGYRCC 1 cut(s) 1111
BspTI CTTAAG 1 cut(s) 374
BspTNI GGTCTC 2 cut(s) 424, 980
BsrDI GCAATG 1 cut(s) 628
BsrI ACTGG 8 cut(s) 397, 445, 776, 1144, 1359, 1419, 1927, 2322
BssECI CCNNGG 6 cut(s) 39, 270, 755, 945, 946, 2284
BssNI GRCGYC 1 cut(s) 9
BssT1I CCWWGG 2 cut(s) 270, 2284
Bst2UI CCWGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
Bst4CI ACNGT 6 cut(s) 215, 470, 536, 1883, 2022, 2202
Bst6I CTCTTC 4 cut(s) 360, 886, 1684, 2131
BstACI GRCGYC 1 cut(s) 9
BstAFI CTTAAG 1 cut(s) 374
BstEII GGTNACC 1 cut(s) 765
BstENI CCTNNNNNAGG 1 cut(s) 700
BstF5I GGATG 8 cut(s) 145, 787, 832, 859, 883, 1498, 1660, 2161
BstFNI CGCG 1 cut(s) 1944
BstHHI GCGC 2 cut(s) 38, 381
BstMAI GTCTC 6 cut(s) 424, 980, 1254, 1761, 2056, 2308
BstMWI GCNNNNNNNGC 6 cut(s) 70, 84, 376, 902, 1941, 1960
BstNI CCWGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
BstNSI RCATGY 4 cut(s) 458, 570, 1718, 2234
BstPAI GACNNNNGTC 1 cut(s) 2068
BstPI GGTNACC 1 cut(s) 765
BstSCI CCNGG 6 cut(s) 754, 945, 1613, 1798, 1831, 1869
BstSFI CTRYAG 3 cut(s) 810, 1167, 1773
BstSLI GKGCMC 1 cut(s) 534
BstUI CGCG 1 cut(s) 1944
BstV1I GCAGC 7 cut(s) 76, 218, 521, 824, 1284, 1887, 1897
BstV2I GAAGAC 2 cut(s) 888, 1716
BstX2I RGATCY 1 cut(s) 866
BstXI CCANNNNNNTGG 1 cut(s) 650
BstYI RGATCY 1 cut(s) 866
BsuI GTATCC 1 cut(s) 2344
BsuRI GGCC 2 cut(s) 396, 695
BtgZI GCGATG 1 cut(s) 1959
BtrI CACGTC 1 cut(s) 24
BtsCI GGATG 8 cut(s) 145, 787, 832, 859, 883, 1498, 1660, 2161
BtsI GCAGTG 2 cut(s) 228, 1570
BtsIMutI CAGTG 7 cut(s) 228, 297, 783, 1366, 1570, 1920, 2227
BtuMI TCGCGA 1 cut(s) 1944
BveI ACCTGC 2 cut(s) 916, 1174
CaiI CAGNNNCTG 1 cut(s) 1743
CciI TCATGA 2 cut(s) 195, 2101
CfoI GCGC 2 cut(s) 38, 381
Cfr13I GGNCC 2 cut(s) 275, 1867
CseI GACGC 1 cut(s) 740
Csp6I GTAC 7 cut(s) 432, 490, 1029, 1112, 1577, 1811, 2274
CviQI GTAC 7 cut(s) 432, 490, 1029, 1112, 1577, 1811, 2274
DraI TTTAAA 2 cut(s) 840, 1695
EaeI YGGCCR 1 cut(s) 394
Eam1104I CTCTTC 4 cut(s) 360, 886, 1684, 2131
EarI CTCTTC 4 cut(s) 360, 886, 1684, 2131
EciI GGCGGA 3 cut(s) 146, 762, 1653
Ecl136II GAGCTC 1 cut(s) 1954
Eco130I CCWWGG 2 cut(s) 270, 2284
Eco24I GRGCYC 1 cut(s) 1956
Eco31I GGTCTC 2 cut(s) 424, 980
Eco47I GGWCC 2 cut(s) 275, 1867
Eco53kI GAGCTC 1 cut(s) 1954
Eco57I CTGAAG 7 cut(s) 255, 300, 1089, 1425, 1521, 1752, 2095
Eco91I GGTNACC 1 cut(s) 765
EcoICRI GAGCTC 1 cut(s) 1954
EcoNI CCTNNNNNAGG 1 cut(s) 700
EcoO109I RGGNCCY 1 cut(s) 275
EcoO65I GGTNACC 1 cut(s) 765
EcoRII CCWGG 6 cut(s) 754, 945, 1613, 1798, 1831, 1869
EcoT14I CCWWGG 2 cut(s) 270, 2284
EcoT22I ATGCAT 1 cut(s) 1599
EcoT38I GRGCYC 1 cut(s) 1956
ErhI CCWWGG 2 cut(s) 270, 2284
FalI AAGNNNNNCTT 6 cut(s) 354, 386, 357, 389, 898, 930
FaqI GGGAC 2 cut(s) 288, 398
FauNDI CATATG 1 cut(s) 2055
Fnu4HI GCNGC 7 cut(s) 65, 207, 510, 813, 1273, 1901, 1911
FokI GGATG 8 cut(s) 152, 794, 819, 866, 890, 1505, 1647, 2148
FriOI GRGCYC 1 cut(s) 1956
Fsp4HI GCNGC 7 cut(s) 65, 207, 510, 813, 1273, 1901, 1911
FspBI CTAG 8 cut(s) 326, 686, 849, 888, 936, 993, 1857, 2285
GlaI GCGC 2 cut(s) 37, 380
GluI GCNGC 7 cut(s) 65, 207, 510, 813, 1273, 1901, 1911
GsaI CCCAGC 1 cut(s) 1633
GsuI CTGGAG 1 cut(s) 1815
HaeIII GGCC 2 cut(s) 396, 695
HgaI GACGC 1 cut(s) 740
HhaI GCGC 2 cut(s) 38, 381
Hin1I GRCGYC 1 cut(s) 9
Hin6I GCGC 2 cut(s) 36, 379
HinP1I GCGC 2 cut(s) 36, 379
HincII GTYRAC 1 cut(s) 2073
HindII GTYRAC 1 cut(s) 2073
HindIII AAGCTT 1 cut(s) 1764
HinfI GANTC 7 cut(s) 112, 322, 884, 1640, 1703, 1891, 2359
HphI GGTGA 5 cut(s) 241, 1215, 1287, 1556, 1818
Hpy166II GTNNAC 5 cut(s) 532, 941, 1867, 2073, 2205
Hpy8I GTNNAC 5 cut(s) 532, 941, 1867, 2073, 2205
Hpy99I CGWCG 1 cut(s) 14
HpyAV CCTTC 9 cut(s) 130, 138, 143, 409, 978, 1365, 1391, 1496, 1812
HpyCH4III ACNGT 6 cut(s) 215, 470, 536, 1883, 2022, 2202
HpyCH4IV ACGT 3 cut(s) 9, 23, 488
HpyF10VI GCNNNNNNNGC 6 cut(s) 70, 84, 376, 902, 1941, 1960
HpySE526I ACGT 3 cut(s) 9, 23, 488
Hsp92I GRCGYC 1 cut(s) 9
HspAI GCGC 2 cut(s) 36, 379
KpnI GGTACC 1 cut(s) 1115
LguI GCTCTTC 2 cut(s) 360, 886
LmnI GCTCC 3 cut(s) 1172, 1740, 2055
Lsp1109I GCAGC 7 cut(s) 76, 218, 521, 824, 1284, 1887, 1897
MaeI CTAG 8 cut(s) 326, 686, 849, 888, 936, 993, 1857, 2285
MaeII ACGT 3 cut(s) 9, 23, 488
MaeIII GTNAC 7 cut(s) 5, 229, 730, 765, 1365, 1925, 2369
MflI RGATCY 1 cut(s) 866
MhlI GDGCHC 3 cut(s) 534, 961, 1956
MlsI TGGCCA 1 cut(s) 396
MluNI TGGCCA 1 cut(s) 396
MlyI GAGTC 2 cut(s) 878, 2353
MmeI TCCRAC 1 cut(s) 340
Mox20I TGGCCA 1 cut(s) 396
Mph1103I ATGCAT 1 cut(s) 1599
MroXI GAANNNNTTC 1 cut(s) 369
MscI TGGCCA 1 cut(s) 396
MslI CAYNNNNRTG 2 cut(s) 200, 1715
Msp20I TGGCCA 1 cut(s) 396
MspA1I CMGCKG 2 cut(s) 163, 1910
MspCI CTTAAG 1 cut(s) 374
MspR9I CCNGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
MvaI CCWGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
MvnI CGCG 1 cut(s) 1944
MwoI GCNNNNNNNGC 6 cut(s) 70, 84, 376, 902, 1941, 1960
NdeI CATATG 1 cut(s) 2055
NlaIV GGNNCC 5 cut(s) 276, 577, 1113, 1174, 2051
NmeAIII GCCGAG 1 cut(s) 64
NmuCI GTSAC 2 cut(s) 5, 229
NruI TCGCGA 1 cut(s) 1944
NsiI ATGCAT 1 cut(s) 1599
NspI RCATGY 4 cut(s) 458, 570, 1718, 2234
PagI TCATGA 2 cut(s) 195, 2101
PasI CCCWGGG 1 cut(s) 946
PciI ACATGT 1 cut(s) 1714
PciSI GCTCTTC 2 cut(s) 360, 886
PdmI GAANNNNTTC 1 cut(s) 369
PfeI GAWTC 5 cut(s) 112, 322, 1640, 1703, 1891
PflFI GACNNNGTC 1 cut(s) 1215
PkrI GCNGC 7 cut(s) 66, 208, 511, 814, 1274, 1902, 1912
PleI GAGTC 2 cut(s) 878, 2353
PpsI GAGTC 2 cut(s) 878, 2353
PpuMI RGGWCCY 1 cut(s) 275
PscI ACATGT 1 cut(s) 1714
PshAI GACNNNNGTC 1 cut(s) 2068
PsiI TTATAA 1 cut(s) 1268
Psp124BI GAGCTC 1 cut(s) 1956
Psp5II RGGWCCY 1 cut(s) 275
Psp6I CCWGG 6 cut(s) 754, 945, 1613, 1798, 1831, 1869
PspEI GGTNACC 1 cut(s) 765
PspFI CCCAGC 1 cut(s) 1629
PspGI CCWGG 6 cut(s) 754, 945, 1613, 1798, 1831, 1869
PspN4I GGNNCC 5 cut(s) 276, 577, 1113, 1174, 2051
PspPI GGNCC 2 cut(s) 275, 1867
PspPPI RGGWCCY 1 cut(s) 275
PsrI GAACNNNNNNTAC 2 cut(s) 1021, 1053
PstI CTGCAG 2 cut(s) 814, 1171
PstNI CAGNNNCTG 1 cut(s) 1743
PsuI RGATCY 1 cut(s) 866
PsyI GACNNNGTC 1 cut(s) 1215
PvuII CAGCTG 1 cut(s) 1910
RruI TCGCGA 1 cut(s) 1944
RsaI GTAC 7 cut(s) 433, 491, 1030, 1113, 1578, 1812, 2275
RsaNI GTAC 7 cut(s) 432, 490, 1029, 1112, 1577, 1811, 2274
RseI CAYNNNNRTG 2 cut(s) 200, 1715
SacI GAGCTC 1 cut(s) 1956
SapI GCTCTTC 2 cut(s) 360, 886
SatI GCNGC 7 cut(s) 65, 207, 510, 813, 1273, 1901, 1911
Sau96I GGNCC 2 cut(s) 275, 1867
SbfI CCTGCAGG 1 cut(s) 1171
ScaI AGTACT 1 cut(s) 1030
SchI GAGTC 2 cut(s) 878, 2353
ScrFI CCNGG 6 cut(s) 756, 947, 1615, 1800, 1833, 1871
SdaI CCTGCAGG 1 cut(s) 1171
SduI GDGCHC 3 cut(s) 534, 961, 1956
SfcI CTRYAG 3 cut(s) 810, 1167, 1773
SinI GGWCC 2 cut(s) 275, 1867
SmiI ATTTAAAT 1 cut(s) 1695
SmiMI CAYNNNNRTG 2 cut(s) 200, 1715
SmlI CTYRAG 3 cut(s) 68, 374, 493
SmoI CTYRAG 3 cut(s) 68, 374, 493
SpeI ACTAGT 1 cut(s) 685
Sse8387I CCTGCAGG 1 cut(s) 1171
SsiI CCGC 6 cut(s) 131, 161, 250, 773, 875, 1664
SspI AATATT 2 cut(s) 1474, 1992
SspMI CTAG 8 cut(s) 326, 686, 849, 888, 936, 993, 1857, 2285
SstI GAGCTC 1 cut(s) 1956
StyD4I CCNGG 6 cut(s) 754, 945, 1613, 1798, 1831, 1869
StyI CCWWGG 2 cut(s) 270, 2284
SwaI ATTTAAAT 1 cut(s) 1695
TaaI ACNGT 6 cut(s) 215, 470, 536, 1883, 2022, 2202
TaiI ACGT 3 cut(s) 12, 26, 491
TaqI TCGA 5 cut(s) 437, 514, 1243, 1790, 2362
TaqII GACCGA 1 cut(s) 71
TatI WGTACW 2 cut(s) 1028, 2273
TfiI GAWTC 5 cut(s) 112, 322, 1640, 1703, 1891
TscAI CASTG 7 cut(s) 228, 304, 783, 1366, 1570, 1927, 2227
TseFI GTSAC 2 cut(s) 5, 229
TseI GCWGC 7 cut(s) 64, 206, 509, 812, 1272, 1900, 1910
Tsp45I GTSAC 2 cut(s) 5, 229
TspDTI ATGAA 9 cut(s) 696, 894, 992, 1002, 1499, 1511, 1699, 2090, 2323
TspGWI ACGGA 1 cut(s) 334
TspRI CASTG 7 cut(s) 228, 304, 783, 1366, 1570, 1927, 2227
Tth111I GACNNNGTC 1 cut(s) 1215
Vha464I CTTAAG 1 cut(s) 374
VneI GTGCAC 1 cut(s) 530
VpaK11BI GGWCC 2 cut(s) 275, 1867
XagI CCTNNNNNAGG 1 cut(s) 700
XapI RAATTY 3 cut(s) 1486, 2330, 2403
XbaI TCTAGA 1 cut(s) 887
XceI RCATGY 4 cut(s) 458, 570, 1718, 2234
XmaJI CCTAGG 1 cut(s) 2284
XmnI GAANNNNTTC 1 cut(s) 369
XspI CTAG 8 cut(s) 326, 686, 849, 888, 936, 993, 1857, 2285
ZraI GACGTC 1 cut(s) 10
ZrmI AGTACT 1 cut(s) 1030
Zsp2I ATGCAT 1 cut(s) 1599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.