Rw3G013610

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr3
OG0014760
Physical Location & Seq
Reverse (-)
13464862 .. 13467847
2986 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw3G013610.1

Sequence Viewer

Length: 1689 bp
ATGAGTGACGTCGGAGAACAGACGTGTCCGATATGCGCCGAGGAGATGGATTTGACCGATCAGCAGCTCAAGCCCTGCGAATGTGGCTATGAGGTCTGTCTGTGGTGCTGGAATCACATTATGGAGATGGCGGAGAAGGATGGAAGGGAAGGTCGGTGTCCGCTGTGCCGAACAACTTACGACAAAGAGAAGATCATGAGGGTGGCAGCAAACTGTAAAGCAGTGTTGGTGACTGAAGTTAATCAGAAGCGGAAACAGAAAAAGCCCCCCAAGGGACCTGAAGCAAAGAAGCATCTCACTGATGTTAGAGTTCTACAACGGAATCTAGCTTACATAATTGGATTACCTCTCAACCTTGCAAAAGAAGAGCTTCTTAAGCGCAGGGACTATTTTGGCCAGTATGGAAAAGTGTTGAAGGTCTCTATTTCTCGTACATCGACTGGGGATATTCAACATGCTACTAACAACAGTTGTTGTGTGTATATAACGTACTCAAGTGAATATGAGGCAGCTCGATGTATTCAATCGGTGCACAGTTTTGTATTAGATGGTAATTCTTTGAGAGCATGTTTTGGAACCACAAAGTATTGCCATGCTTGGTTGAAAAATGTGCCTTGTAGCAATGCAGATTGTATGTATCTCCATGATTTTGGCTCTCAGGAAGATAGTTTTTCCAAAGATGAACTAGTTTCGGCCTTCGAAAGGAGTAAGGATTTACAGATTATCGGTGTTACAAATAATCTGCATCAGCGTCCAGGGAAAGGGTTACCTCCGCCAGTGGATGAGAATAGCAAATCAAAAATATCATCTGCAGCTAAACCACTTGTCAAACATCCTTTAAATAACACTAGGGATGAGTTTAAAGGATCTTGTGCGGATGAAGACTCTAGAAGAGCTACTCCTGCAAGAACTTCTTGGGTCATGCAGGTTGCCCCTAGTTTACCCCTGGGAACAAGTGCTCAAATGCCTTCCTATCAAAAGCCTGAGACCTCTAGTGACGTTCATGCTCTTTCATCAGAAGTTTTAAGCACTGAAAGTTCTAACCTCAGAGTAAGATCTATTACATCTGAAGAAAGCTGTGAAGTGCGTTTTAATAGTTTGGATCATCTGGTACTGACCAAACAGAATAGTGAAGAAACTGGTCAAGTAGCCTTATCAAATAAACCTGCAGGAGCCTTTGTAGATAGCACTCTTGTACGTATAACTTCTGGACATTGTCTATCACCAGATAAAGGTGTTGATCGAGATATTAAATCCACAGACTTTATAAGCAGCAGAAACTTAAATTGTCTATCACCAAACTTATCCAAAAGTTTATGTGATAACAAAGGAAGTAGCTTTGCTACATTTGATCCTTCCAGTGTGTTACCAAAGATGGGATTAGCGAAGTATTCGGAAGGGTCTGAAAACAATAAAGCCAGTATTGACTGCAATCTTTCTTCAGATTTAGGGGAGAGTGGCATAATCTCAAATATTTTGACGATGAATTTGGATGCACCTGAAGGTTCTTTAACTGAGCTTCATAATCTGGTTAATTTGTTGGGTGAAACTGATAAAGAAAGCAGTGTTCTCAGAGTACCTAGTTCAAGAAAAATGCATGAGAAAAAGCAGTCCAGGTTCTCATTTGCCCAGCAAGAGGATTCTTGTGATAATATATGGCATCCGCCCAAAGACTACTCTTCTATCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

562

Amino Acids

62.25

Weight (kDa)

6.42

Isoelectric Point (pI)

55.0

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_4 PF14570 9 - 61 3.6e-18 RING/Ubox like zinc-binding domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014760)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g15190
malus_domestica MD12G1125800.v1.1
prunus_persica Prupe.6G242300_v2.0.a1 Prupe.6G242300_v2.0.a1
pyrus_communis pycom12g12400
rosa_chinensis RchiOBHm_Chr3g0468541
rosa_laevigata RLG00000024424
rosa_multiflora Rmu_sc0008735.1_g000001 Rmu_sc0009516.1_g000009
rosa_roxburghii Rroxscaffold_6G00412710
rosa_rugosa Rorug03G0095700 Rorug03G0095800 Rorug03G0095800
rosa_samantha Rh3AG144200 Rh3BG166400 Rh3DG165800
rosa_wichuraiana Rw3G013610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1268
AatII GACGTC 1 cut(s) 12
Acc36I ACCTGC 2 cut(s) 916, 1174
AciI CCGC 6 cut(s) 131, 161, 250, 773, 875, 1664
AclWI GGATC 3 cut(s) 874, 1110, 1346
AcoI YGGCCR 1 cut(s) 394
AcsI RAATTY 1 cut(s) 1486
AcuI CTGAAG 5 cut(s) 255, 300, 1089, 1425, 1521
AcyI GRCGYC 1 cut(s) 9
AfaI GTAC 5 cut(s) 433, 491, 1113, 1197, 1578
AfiI CCNNNNNNNGG 6 cut(s) 272, 702, 761, 1232, 1376, 1636
AflII CTTAAG 1 cut(s) 374
AflIII ACRYGT 1 cut(s) 23
AgsI TTSAA 5 cut(s) 415, 452, 524, 604, 1587
AhlI ACTAGT 1 cut(s) 685
AjiI CACGTC 1 cut(s) 24
AjnI CCWGG 3 cut(s) 754, 945, 1613
AluBI AGCT 9 cut(s) 67, 329, 370, 512, 815, 896, 1077, 1338, 1519
AluI AGCT 9 cut(s) 67, 329, 370, 512, 815, 896, 1077, 1338, 1519
Alw21I GWGCWC 2 cut(s) 534, 961
Alw26I GTCTC 2 cut(s) 424, 980
Alw44I GTGCAC 1 cut(s) 530
AlwI GGATC 3 cut(s) 874, 1110, 1346
AoxI GGCC 2 cut(s) 394, 693
ApaLI GTGCAC 1 cut(s) 530
ApeKI GCWGC 5 cut(s) 64, 206, 509, 812, 1272
ApoI RAATTY 1 cut(s) 1486
ArsI GACNNNNNNTTYG 2 cut(s) 1471, 1503
Asp700I GAANNNNTTC 1 cut(s) 369
AspLEI GCGC 2 cut(s) 38, 381
AspS9I GGNCC 1 cut(s) 275
AsuHPI GGTGA 4 cut(s) 241, 1215, 1287, 1556
AsuII TTCGAA 1 cut(s) 699
AvaII GGWCC 1 cut(s) 275
BaeGI GKGCMC 1 cut(s) 534
BalI TGGCCA 1 cut(s) 396
BbsI GAAGAC 1 cut(s) 888
Bbv12I GWGCWC 2 cut(s) 534, 961
BbvI GCAGC 5 cut(s) 76, 218, 521, 824, 1284
BccI CCATC 5 cut(s) 40, 121, 134, 542, 1369
BciT130I CCWGG 3 cut(s) 756, 947, 1615
BcoDI GTCTC 2 cut(s) 424, 980
BcuI ACTAGT 1 cut(s) 685
BfaI CTAG 7 cut(s) 326, 686, 849, 888, 936, 993, 1581
BfmI CTRYAG 2 cut(s) 810, 1167
BfrI CTTAAG 1 cut(s) 374
BfuAI ACCTGC 2 cut(s) 916, 1174
BglII AGATCT 1 cut(s) 1055
BisI GCNGC 5 cut(s) 65, 207, 510, 813, 1273
BlsI GCNGC 5 cut(s) 66, 208, 511, 814, 1274
Bme1390I CCNGG 3 cut(s) 756, 947, 1615
Bme18I GGWCC 1 cut(s) 275
BmgBI CACGTC 1 cut(s) 24
BmgT120I GGNCC 1 cut(s) 275
BmiI GGNNCC 3 cut(s) 276, 577, 1174
BmrFI CCNGG 3 cut(s) 756, 947, 1615
BmrI ACTGGG 1 cut(s) 450
BmsI GCATC 4 cut(s) 301, 754, 1483, 1669
BmuI ACTGGG 1 cut(s) 450
BpiI GAAGAC 1 cut(s) 888
Bpu14I TTCGAA 1 cut(s) 699
BpuEI CTTGAG 2 cut(s) 53, 478
BsaAI YACGTR 1 cut(s) 1199
BsaHI GRCGYC 1 cut(s) 9
BsaI GGTCTC 2 cut(s) 424, 980
BsaJI CCNNGG 5 cut(s) 39, 270, 755, 945, 946
BsaXI ACNNNNNCTCC 2 cut(s) 1164, 1194
Bsc4I CCNNNNNNNGG 6 cut(s) 272, 702, 761, 1232, 1376, 1636
Bse1I ACTGG 6 cut(s) 397, 445, 776, 1144, 1359, 1419
Bse3DI GCAATG 1 cut(s) 628
BseBI CCWGG 3 cut(s) 756, 947, 1615
BseDI CCNNGG 5 cut(s) 39, 270, 755, 945, 946
BseGI GGATG 7 cut(s) 145, 787, 832, 859, 883, 1498, 1660
BseLI CCNNNNNNNGG 6 cut(s) 272, 702, 761, 1232, 1376, 1636
BseMI GCAATG 1 cut(s) 628
BseMII CTCAG 5 cut(s) 671, 975, 1060, 1506, 1585
BseNI ACTGG 6 cut(s) 397, 445, 776, 1144, 1359, 1419
BseRI GAGGAG 1 cut(s) 56
BseSI GKGCMC 1 cut(s) 534
BseXI GCAGC 5 cut(s) 76, 218, 521, 824, 1284
BseYI CCCAGC 1 cut(s) 1629
BshFI GGCC 2 cut(s) 396, 695
BsiHKAI GWGCWC 2 cut(s) 534, 961
BslFI GGGAC 2 cut(s) 288, 398
BslI CCNNNNNNNGG 6 cut(s) 272, 702, 761, 1232, 1376, 1636
BsmAI GTCTC 2 cut(s) 424, 980
BsmFI GGGAC 2 cut(s) 288, 398
BsnI GGCC 2 cut(s) 396, 695
Bso31I GGTCTC 2 cut(s) 424, 980
Bsp119I TTCGAA 1 cut(s) 699
Bsp1286I GDGCHC 2 cut(s) 534, 961
Bsp143I GATC 7 cut(s) 58, 192, 866, 1055, 1102, 1240, 1351
BspACI CCGC 6 cut(s) 131, 161, 250, 773, 875, 1664
BspANI GGCC 2 cut(s) 396, 695
BspCNI CTCAG 5 cut(s) 670, 976, 1059, 1507, 1584
BspHI TCATGA 1 cut(s) 195
BspLI GGNNCC 3 cut(s) 276, 577, 1174
BspMAI CTGCAG 2 cut(s) 814, 1171
BspMI ACCTGC 2 cut(s) 916, 1174
BspPI GGATC 3 cut(s) 874, 1110, 1346
BspQI GCTCTTC 2 cut(s) 360, 886
BspT104I TTCGAA 1 cut(s) 699
BspTI CTTAAG 1 cut(s) 374
BspTNI GGTCTC 2 cut(s) 424, 980
BsrDI GCAATG 1 cut(s) 628
BsrI ACTGG 6 cut(s) 397, 445, 776, 1144, 1359, 1419
BssECI CCNNGG 5 cut(s) 39, 270, 755, 945, 946
BssMI GATC 7 cut(s) 58, 192, 866, 1055, 1102, 1240, 1351
BssNI GRCGYC 1 cut(s) 9
BssT1I CCWWGG 1 cut(s) 270
Bst2UI CCWGG 3 cut(s) 756, 947, 1615
Bst4CI ACNGT 3 cut(s) 215, 470, 536
Bst6I CTCTTC 3 cut(s) 360, 886, 1684
BstACI GRCGYC 1 cut(s) 9
BstAFI CTTAAG 1 cut(s) 374
BstBAI YACGTR 1 cut(s) 1199
BstBI TTCGAA 1 cut(s) 699
BstDEI CTNAG 5 cut(s) 657, 984, 1046, 1515, 1571
BstEII GGTNACC 1 cut(s) 765
BstENI CCTNNNNNAGG 1 cut(s) 700
BstF5I GGATG 7 cut(s) 145, 787, 832, 859, 883, 1498, 1660
BstHHI GCGC 2 cut(s) 38, 381
BstKTI GATC 7 cut(s) 61, 195, 869, 1058, 1105, 1243, 1354
BstMAI GTCTC 2 cut(s) 424, 980
BstMBI GATC 7 cut(s) 58, 192, 866, 1055, 1102, 1240, 1351
BstMWI GCNNNNNNNGC 4 cut(s) 70, 84, 376, 902
BstNI CCWGG 3 cut(s) 756, 947, 1615
BstNSI RCATGY 2 cut(s) 458, 570
BstPI GGTNACC 1 cut(s) 765
BstSCI CCNGG 3 cut(s) 754, 945, 1613
BstSFI CTRYAG 2 cut(s) 810, 1167
BstSLI GKGCMC 1 cut(s) 534
BstSNI TACGTA 1 cut(s) 1199
BstV1I GCAGC 5 cut(s) 76, 218, 521, 824, 1284
BstV2I GAAGAC 1 cut(s) 888
BstX2I RGATCY 2 cut(s) 866, 1055
BstXI CCANNNNNNTGG 1 cut(s) 650
BstYI RGATCY 2 cut(s) 866, 1055
BsuRI GGCC 2 cut(s) 396, 695
BtrI CACGTC 1 cut(s) 24
BtsCI GGATG 7 cut(s) 145, 787, 832, 859, 883, 1498, 1660
BtsI GCAGTG 2 cut(s) 228, 1570
BtsIMutI CAGTG 6 cut(s) 228, 297, 783, 1029, 1366, 1570
BveI ACCTGC 2 cut(s) 916, 1174
CciI TCATGA 1 cut(s) 195
CfoI GCGC 2 cut(s) 38, 381
Cfr13I GGNCC 1 cut(s) 275
CseI GACGC 1 cut(s) 740
Csp6I GTAC 5 cut(s) 432, 490, 1112, 1196, 1577
CviAII CATG 8 cut(s) 196, 455, 567, 593, 644, 922, 1004, 1598
CviQI GTAC 5 cut(s) 432, 490, 1112, 1196, 1577
DdeI CTNAG 5 cut(s) 657, 984, 1046, 1515, 1571
DpnI GATC 7 cut(s) 60, 194, 868, 1057, 1104, 1242, 1353
DpnII GATC 7 cut(s) 58, 192, 866, 1055, 1102, 1240, 1351
DraI TTTAAA 2 cut(s) 840, 862
EaeI YGGCCR 1 cut(s) 394
Eam1104I CTCTTC 3 cut(s) 360, 886, 1684
EarI CTCTTC 3 cut(s) 360, 886, 1684
EciI GGCGGA 3 cut(s) 146, 762, 1653
Eco105I TACGTA 1 cut(s) 1199
Eco130I CCWWGG 1 cut(s) 270
Eco31I GGTCTC 2 cut(s) 424, 980
Eco47I GGWCC 1 cut(s) 275
Eco57I CTGAAG 5 cut(s) 255, 300, 1089, 1425, 1521
Eco91I GGTNACC 1 cut(s) 765
EcoNI CCTNNNNNAGG 1 cut(s) 700
EcoO109I RGGNCCY 1 cut(s) 275
EcoO65I GGTNACC 1 cut(s) 765
EcoRII CCWGG 3 cut(s) 754, 945, 1613
EcoT14I CCWWGG 1 cut(s) 270
EcoT22I ATGCAT 1 cut(s) 1599
ErhI CCWWGG 1 cut(s) 270
FaeI CATG 8 cut(s) 199, 458, 570, 596, 647, 925, 1007, 1601
FalI AAGNNNNNCTT 6 cut(s) 354, 386, 357, 389, 898, 930
FaqI GGGAC 2 cut(s) 288, 398
FatI CATG 8 cut(s) 195, 454, 566, 592, 643, 921, 1003, 1597
Fnu4HI GCNGC 5 cut(s) 65, 207, 510, 813, 1273
FokI GGATG 7 cut(s) 152, 794, 819, 866, 890, 1505, 1647
Fsp4HI GCNGC 5 cut(s) 65, 207, 510, 813, 1273
FspBI CTAG 7 cut(s) 326, 686, 849, 888, 936, 993, 1581
GlaI GCGC 2 cut(s) 37, 380
GluI GCNGC 5 cut(s) 65, 207, 510, 813, 1273
GsaI CCCAGC 1 cut(s) 1633
HaeIII GGCC 2 cut(s) 396, 695
HgaI GACGC 1 cut(s) 740
HhaI GCGC 2 cut(s) 38, 381
Hin1I GRCGYC 1 cut(s) 9
Hin1II CATG 8 cut(s) 199, 458, 570, 596, 647, 925, 1007, 1601
Hin6I GCGC 2 cut(s) 36, 379
HinP1I GCGC 2 cut(s) 36, 379
HinfI GANTC 4 cut(s) 112, 322, 884, 1640
HphI GGTGA 4 cut(s) 241, 1215, 1287, 1556
Hpy166II GTNNAC 2 cut(s) 532, 941
Hpy188III TCNNGA 6 cut(s) 196, 659, 888, 1209, 1244, 1587
Hpy8I GTNNAC 2 cut(s) 532, 941
Hpy99I CGWCG 1 cut(s) 14
HpyAV CCTTC 9 cut(s) 130, 138, 143, 409, 706, 978, 1365, 1391, 1496
HpyCH4III ACNGT 3 cut(s) 215, 470, 536
HpyCH4IV ACGT 5 cut(s) 9, 23, 488, 999, 1198
HpyF10VI GCNNNNNNNGC 4 cut(s) 70, 84, 376, 902
HpyF3I CTNAG 5 cut(s) 657, 984, 1046, 1515, 1571
HpySE526I ACGT 5 cut(s) 9, 23, 488, 999, 1198
Hsp92I GRCGYC 1 cut(s) 9
Hsp92II CATG 8 cut(s) 199, 458, 570, 596, 647, 925, 1007, 1601
HspAI GCGC 2 cut(s) 36, 379
Kzo9I GATC 7 cut(s) 58, 192, 866, 1055, 1102, 1240, 1351
LguI GCTCTTC 2 cut(s) 360, 886
LmnI GCTCC 1 cut(s) 1172
Lsp1109I GCAGC 5 cut(s) 76, 218, 521, 824, 1284
LweI GCATC 4 cut(s) 301, 754, 1483, 1669
MaeI CTAG 7 cut(s) 326, 686, 849, 888, 936, 993, 1581
MaeII ACGT 5 cut(s) 9, 23, 488, 999, 1198
MaeIII GTNAC 6 cut(s) 5, 229, 730, 765, 995, 1365
MalI GATC 7 cut(s) 60, 194, 868, 1057, 1104, 1242, 1353
MboI GATC 7 cut(s) 58, 192, 866, 1055, 1102, 1240, 1351
MboII GAAGA 9 cut(s) 202, 377, 674, 893, 903, 1082, 1145, 1431, 1671
MflI RGATCY 2 cut(s) 866, 1055
MhlI GDGCHC 2 cut(s) 534, 961
MlsI TGGCCA 1 cut(s) 396
MluCI AATT 5 cut(s) 336, 553, 1285, 1486, 1534
MluNI TGGCCA 1 cut(s) 396
MlyI GAGTC 1 cut(s) 878
MnlI CCTC 9 cut(s) 34, 85, 192, 357, 499, 780, 1000, 1055, 1630
Mox20I TGGCCA 1 cut(s) 396
Mph1103I ATGCAT 1 cut(s) 1599
MroXI GAANNNNTTC 1 cut(s) 369
MscI TGGCCA 1 cut(s) 396
MslI CAYNNNNRTG 1 cut(s) 200
Msp20I TGGCCA 1 cut(s) 396
MspA1I CMGCKG 1 cut(s) 163
MspCI CTTAAG 1 cut(s) 374
MspR9I CCNGG 3 cut(s) 756, 947, 1615
MvaI CCWGG 3 cut(s) 756, 947, 1615
MwoI GCNNNNNNNGC 4 cut(s) 70, 84, 376, 902
NdeII GATC 7 cut(s) 58, 192, 866, 1055, 1102, 1240, 1351
NlaIII CATG 8 cut(s) 199, 458, 570, 596, 647, 925, 1007, 1601
NlaIV GGNNCC 3 cut(s) 276, 577, 1174
NmeAIII GCCGAG 1 cut(s) 64
NmuCI GTSAC 3 cut(s) 5, 229, 995
NsiI ATGCAT 1 cut(s) 1599
NspI RCATGY 2 cut(s) 458, 570
NspV TTCGAA 1 cut(s) 699
PagI TCATGA 1 cut(s) 195
PasI CCCWGGG 1 cut(s) 946
PciSI GCTCTTC 2 cut(s) 360, 886
PdmI GAANNNNTTC 1 cut(s) 369
PfeI GAWTC 3 cut(s) 112, 322, 1640
PflFI GACNNNGTC 1 cut(s) 1215
PkrI GCNGC 5 cut(s) 66, 208, 511, 814, 1274
PleI GAGTC 1 cut(s) 878
PpsI GAGTC 1 cut(s) 878
Ppu21I YACGTR 1 cut(s) 1199
PpuMI RGGWCCY 1 cut(s) 275
PsiI TTATAA 1 cut(s) 1268
Psp5II RGGWCCY 1 cut(s) 275
Psp6I CCWGG 3 cut(s) 754, 945, 1613
PspEI GGTNACC 1 cut(s) 765
PspFI CCCAGC 1 cut(s) 1629
PspGI CCWGG 3 cut(s) 754, 945, 1613
PspN4I GGNNCC 3 cut(s) 276, 577, 1174
PspPI GGNCC 1 cut(s) 275
PspPPI RGGWCCY 1 cut(s) 275
PstI CTGCAG 2 cut(s) 814, 1171
PsuI RGATCY 2 cut(s) 866, 1055
PsyI GACNNNGTC 1 cut(s) 1215
RsaI GTAC 5 cut(s) 433, 491, 1113, 1197, 1578
RsaNI GTAC 5 cut(s) 432, 490, 1112, 1196, 1577
RseI CAYNNNNRTG 1 cut(s) 200
SapI GCTCTTC 2 cut(s) 360, 886
SatI GCNGC 5 cut(s) 65, 207, 510, 813, 1273
Sau3AI GATC 7 cut(s) 58, 192, 866, 1055, 1102, 1240, 1351
Sau96I GGNCC 1 cut(s) 275
SbfI CCTGCAGG 1 cut(s) 1171
SchI GAGTC 1 cut(s) 878
ScrFI CCNGG 3 cut(s) 756, 947, 1615
SdaI CCTGCAGG 1 cut(s) 1171
SduI GDGCHC 2 cut(s) 534, 961
SfaNI GCATC 4 cut(s) 301, 754, 1483, 1669
SfcI CTRYAG 2 cut(s) 810, 1167
SfuI TTCGAA 1 cut(s) 699
SinI GGWCC 1 cut(s) 275
SmiMI CAYNNNNRTG 1 cut(s) 200
SmlI CTYRAG 3 cut(s) 68, 374, 493
SmoI CTYRAG 3 cut(s) 68, 374, 493
SnaBI TACGTA 1 cut(s) 1199
SpeI ACTAGT 1 cut(s) 685
Sse8387I CCTGCAGG 1 cut(s) 1171
Sse9I AATT 5 cut(s) 336, 553, 1285, 1486, 1534
SsiI CCGC 6 cut(s) 131, 161, 250, 773, 875, 1664
SspI AATATT 1 cut(s) 1474
SspMI CTAG 7 cut(s) 326, 686, 849, 888, 936, 993, 1581
StyD4I CCNGG 3 cut(s) 754, 945, 1613
StyI CCWWGG 1 cut(s) 270
TaaI ACNGT 3 cut(s) 215, 470, 536
TaiI ACGT 5 cut(s) 12, 26, 491, 1002, 1201
TaqI TCGA 4 cut(s) 437, 514, 699, 1243
TaqII GACCGA 1 cut(s) 71
TasI AATT 5 cut(s) 336, 553, 1285, 1486, 1534
TfiI GAWTC 3 cut(s) 112, 322, 1640
TscAI CASTG 6 cut(s) 228, 304, 783, 1036, 1366, 1570
TseFI GTSAC 3 cut(s) 5, 229, 995
TseI GCWGC 5 cut(s) 64, 206, 509, 812, 1272
Tsp45I GTSAC 3 cut(s) 5, 229, 995
TspDTI ATGAA 6 cut(s) 696, 894, 992, 1002, 1499, 1511
TspGWI ACGGA 1 cut(s) 334
TspRI CASTG 6 cut(s) 228, 304, 783, 1036, 1366, 1570
Tth111I GACNNNGTC 1 cut(s) 1215
Vha464I CTTAAG 1 cut(s) 374
VneI GTGCAC 1 cut(s) 530
VpaK11BI GGWCC 1 cut(s) 275
XagI CCTNNNNNAGG 1 cut(s) 700
XapI RAATTY 1 cut(s) 1486
XbaI TCTAGA 1 cut(s) 887
XceI RCATGY 2 cut(s) 458, 570
XmnI GAANNNNTTC 1 cut(s) 369
XspI CTAG 7 cut(s) 326, 686, 849, 888, 936, 993, 1581
ZraI GACGTC 1 cut(s) 10
Zsp2I ATGCAT 1 cut(s) 1599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.