Rmu_sc0009516.1_g000009

RING/Ubox like zinc-binding domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0009516.1
OG0014760
Physical Location & Seq
Forward (+)
46882 .. 51245
4364 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0009516.1_g000009.1.cds

Sequence Viewer

Length: 2505 bp
ctgttccccccactctcaccctgcctttttccctttttatcttatcctgcgatttcctcttcttcttcctccaccacactttcctctctggaagccatgagtgacgtcggagaacagacgtgtccgatatgcgccgaggagatggatttgaccgatcagcagctcaagccctgcgaatgtggctatgaggtctgtctgtggtgctggaatcacattatggagatggcggagaaggatggaagggaaggtcggtgtccgctgtgccgaacaacttacgacaaagagaagatcatgagggtggcagcaaactgtaaagcagtgttggtgactgaagttaatcagaagcggaaacagaaaaagccccccaagggacctgaagcaaaaaagcatctcactgatgttagagttctccaacggaatctagcttacataattggattacctctcaaccttgcaaaagaagagcttcttaagcgcagggactattttggccagtatggaaaagtgttgaaggtctctatttctcgtacatcgactggggatattcaacatgctactaacaacagttgttgtgtgtatataacgtactcaagtgaatatgaggcagctcgatgtattcaatcggtgcacagttttgtattagatggtaattctttgagagcatgttttggaaccacaaagtattgccatgcttggttgaaaaatgtgccttgtagcaatgcagattgtatgtatctccatgattttggctctcaggaagatagtttttccaaagatgaactagtttcggcctttgaaaggagtaaggatttacagattattggtgttacaaataatctgcatcagcgtccggggaaaggattacctccgccagtggatgagaatagcaaatcaaaaatatcatctgcagctaaaccacttgtcaaacatcctttaaataacactagggatgagtttaagggatcttgtgcggatgaagactctagaagagctactcctgcaagaacttcttgggtcatgcaggttgcccctagtttacccctgggaacaagtgctcaaatgccttcctatcaaaagcctgagacctctagtgacgttcttgctctttcatcagaagttataagcactgaaagttctaacctcagagtaagatctattacatctgaagaaagctgtgaagtgcgttttaatagtttggatcatctggtactgaccaaacagaatagtgaagaaactggtcaagtagccttatcaaataaacctgcaggagcctttgtagatagcactcttgtacgtataacttctggacattgtctatcaccagataaaggtgttgatcgagatattaaatccacagactctataagcagcagaaacttaaattatctatcaccaaacttatccaaaagtttatgtgataacaaaggaagtagctttgctacatttgatccttccagtgtgttaccaaagatgggattagcgaagtattcggaagggtctgaaaacaataaagccagtattgactgcaatctttcttcagatttaggggagagtggcataatctcaaatattttgacaatgaatttggatgcacctgaaggttctttaactgagcttcataatctggttaatttgttgggtgaaactgataaagaaagcagtgttctcagagtaccaagttcaagaaaaatgcatgagaaaaagcagtccaggttctcatttgcccagcaagaggattcttgtgataatatatggcatccgcccaaagactactattctctatctgatttaaataaggattctttcatacatgtggggtcttcaaatcttctcaggagccgttcttttttgtctcctaaagcttcagctacagaagtacctacttcgatcccaccaggattttcagtaccaagaagggcatcacctccaggtttttcttctcatgggaggtctaggagggtggaccaggcttttgacagttctgtgaatcatttgctgcaaccagctgctatacccactggttactctggcatcactcgggatgctgagctctttgagccatcaatttttgatattggtaatggaatattggagagagggagagcaactttatcacagtataattcttctcagccagatgcaaggctccatatgatgagacagcagtcaactcttacacagcaaaacttaggatttcatgaccacttcaggaatacatactcttccttgcatgatgcacaactactttctccacagcatcccaatcaatttcaacccaatccatctacatttgcacagtccacccctcaacaggtcagtgatgtgcatgtgtcaaatagccattgggttcaatggaatggggtcaagagtacaagtgacctaggaatatcagaattgctgagaaatgagagactgggatttaacaaattcattccttgttatgaggatacaaagactcgatcaagttactttagcgatctaaacagcaaagggtttgaaatttga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
RRM_1 zf-RING_4

Protein Analysis

834

Amino Acids

92.36

Weight (kDa)

6.67

Isoelectric Point (pI)

56.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014760)

Species Orthologous Gene IDs
fragaria_vesca FvH4_6g15190
malus_domestica MD12G1125800.v1.1
prunus_persica Prupe.6G242300_v2.0.a1 Prupe.6G242300_v2.0.a1
pyrus_communis pycom12g12400
rosa_chinensis RchiOBHm_Chr3g0468541
rosa_laevigata RLG00000024424
rosa_multiflora Rmu_sc0008735.1_g000001 Rmu_sc0009516.1_g000009
rosa_roxburghii Rroxscaffold_6G00412710
rosa_rugosa Rorug03G0095700 Rorug03G0095800 Rorug03G0095800
rosa_samantha Rh3AG144200 Rh3BG166400 Rh3DG165800
rosa_wichuraiana Rw3G013610

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1121
AatII GACGTC 1 cut(s) 108
Acc36I ACCTGC 2 cut(s) 1012, 1270
AciI CCGC 6 cut(s) 227, 257, 346, 869, 971, 1760
AclWI GGATC 4 cut(s) 970, 1206, 1442, 1882
AcoI YGGCCR 1 cut(s) 490
AcsI RAATTY 3 cut(s) 1582, 2426, 2499
AcuI CTGAAG 7 cut(s) 351, 396, 1185, 1521, 1617, 1848, 2191
AcyI GRCGYC 1 cut(s) 105
AfaI GTAC 8 cut(s) 529, 587, 1209, 1293, 1674, 1878, 1908, 2371
AfiI CCNNNNNNNGG 7 cut(s) 368, 798, 857, 1328, 1472, 1732, 2311
AflII CTTAAG 1 cut(s) 470
AflIII ACRYGT 2 cut(s) 119, 1810
AhlI ACTAGT 1 cut(s) 781
AjiI CACGTC 1 cut(s) 120
AjnI CCWGG 5 cut(s) 1041, 1709, 1894, 1927, 1965
Alw21I GWGCWC 3 cut(s) 630, 1057, 2052
Alw26I GTCTC 5 cut(s) 520, 1076, 1857, 2152, 2404
Alw44I GTGCAC 1 cut(s) 626
AlwI GGATC 4 cut(s) 970, 1206, 1442, 1882
Ama87I CYCGRG 1 cut(s) 2037
AoxI GGCC 2 cut(s) 490, 789
ApaLI GTGCAC 1 cut(s) 626
ApeKI GCWGC 7 cut(s) 160, 302, 605, 908, 1368, 1996, 2006
ApoI RAATTY 3 cut(s) 1582, 2426, 2499
ArsI GACNNNNNNTTYG 4 cut(s) 1567, 1599, 1955, 1987
Asp700I GAANNNNTTC 1 cut(s) 465
AspA2I CCTAGG 1 cut(s) 2380
AspLEI GCGC 2 cut(s) 134, 477
AspS9I GGNCC 2 cut(s) 371, 1963
AsuC2I CCSGG 1 cut(s) 852
AsuHPI GGTGA 6 cut(s) 9, 337, 1311, 1383, 1652, 1914
AvaI CYCGRG 1 cut(s) 2037
AvaII GGWCC 2 cut(s) 371, 1963
AvrII CCTAGG 1 cut(s) 2380
BaeGI GKGCMC 1 cut(s) 630
BaeI ACNNNNGTAYC 2 cut(s) 1860, 1893
BalI TGGCCA 1 cut(s) 492
BanII GRGCYC 1 cut(s) 2052
BbsI GAAGAC 2 cut(s) 984, 1812
Bbv12I GWGCWC 3 cut(s) 630, 1057, 2052
BbvI GCAGC 7 cut(s) 172, 314, 617, 920, 1380, 1983, 1993
BccI CCATC 7 cut(s) 136, 217, 230, 638, 1465, 2068, 2290
BceAI ACGGC 1 cut(s) 1824
BciT130I CCWGG 5 cut(s) 1043, 1711, 1896, 1929, 1967
BciVI GTATCC 1 cut(s) 2440
BcnI CCSGG 1 cut(s) 852
BcoDI GTCTC 5 cut(s) 520, 1076, 1857, 2152, 2404
BcuI ACTAGT 1 cut(s) 781
BfaI CTAG 8 cut(s) 422, 782, 945, 984, 1032, 1089, 1953, 2381
BfmI CTRYAG 3 cut(s) 906, 1263, 1869
BfrI CTTAAG 1 cut(s) 470
BfuAI ACCTGC 2 cut(s) 1012, 1270
BfuI GTATCC 1 cut(s) 2440
BglII AGATCT 1 cut(s) 1151
BisI GCNGC 7 cut(s) 161, 303, 606, 909, 1369, 1997, 2007
BlnI CCTAGG 1 cut(s) 2380
BlpI GCTNAGC 1 cut(s) 2046
BlsI GCNGC 7 cut(s) 162, 304, 607, 910, 1370, 1998, 2008
Bme1390I CCNGG 6 cut(s) 852, 1043, 1711, 1896, 1929, 1967
Bme18I GGWCC 2 cut(s) 371, 1963
BmeT110I CYCGRG 1 cut(s) 2037
BmgBI CACGTC 1 cut(s) 120
BmgT120I GGNCC 2 cut(s) 371, 1963
BmiI GGNNCC 5 cut(s) 372, 673, 1270, 1838, 2147
BmrFI CCNGG 6 cut(s) 852, 1043, 1711, 1896, 1929, 1967
BmrI ACTGGG 2 cut(s) 546, 2423
BmuI ACTGGG 2 cut(s) 546, 2423
BoxI GACNNNNGTC 1 cut(s) 2164
BpiI GAAGAC 2 cut(s) 984, 1812
BpmI CTGGAG 1 cut(s) 1911
Bpu1102I GCTNAGC 1 cut(s) 2046
BpuEI CTTGAG 2 cut(s) 149, 574
BpuMI CCSGG 1 cut(s) 852
BsaAI YACGTR 1 cut(s) 1295
BsaHI GRCGYC 1 cut(s) 105
BsaI GGTCTC 2 cut(s) 520, 1076
BsaJI CCNNGG 6 cut(s) 135, 366, 851, 1041, 1042, 2380
BsaXI ACNNNNNCTCC 2 cut(s) 1260, 1290
Bsc4I CCNNNNNNNGG 7 cut(s) 368, 798, 857, 1328, 1472, 1732, 2311
Bse1I ACTGG 8 cut(s) 493, 541, 872, 1240, 1455, 1515, 2023, 2418
Bse3DI GCAATG 1 cut(s) 724
BseBI CCWGG 5 cut(s) 1043, 1711, 1896, 1929, 1967
BseDI CCNNGG 6 cut(s) 135, 366, 851, 1041, 1042, 2380
BseGI GGATG 9 cut(s) 241, 883, 928, 955, 979, 1594, 1756, 2047, 2257
BseLI CCNNNNNNNGG 7 cut(s) 368, 798, 857, 1328, 1472, 1732, 2311
BseMI GCAATG 1 cut(s) 724
BseMII CTCAG 9 cut(s) 767, 1071, 1156, 1602, 1681, 1846, 2037, 2144, 2390
BseNI ACTGG 8 cut(s) 493, 541, 872, 1240, 1455, 1515, 2023, 2418
BseRI GAGGAG 1 cut(s) 152
BseSI GKGCMC 1 cut(s) 630
BseXI GCAGC 7 cut(s) 172, 314, 617, 920, 1380, 1983, 1993
BseYI CCCAGC 1 cut(s) 1725
BshFI GGCC 2 cut(s) 492, 791
BsiHKAI GWGCWC 3 cut(s) 630, 1057, 2052
BsiHKCI CYCGRG 1 cut(s) 2037
BsiSI CCGG 1 cut(s) 851
BslFI GGGAC 2 cut(s) 384, 494
BslI CCNNNNNNNGG 7 cut(s) 368, 798, 857, 1328, 1472, 1732, 2311
BsmAI GTCTC 5 cut(s) 520, 1076, 1857, 2152, 2404
BsmFI GGGAC 2 cut(s) 384, 494
BsnI GGCC 2 cut(s) 492, 791
Bso31I GGTCTC 2 cut(s) 520, 1076
BsoBI CYCGRG 1 cut(s) 2037
Bsp1286I GDGCHC 3 cut(s) 630, 1057, 2052
Bsp1720I GCTNAGC 1 cut(s) 2046
BspACI CCGC 6 cut(s) 227, 257, 346, 869, 971, 1760
BspANI GGCC 2 cut(s) 492, 791
BspCNI CTCAG 9 cut(s) 766, 1072, 1155, 1603, 1680, 1845, 2038, 2143, 2391
BspHI TCATGA 2 cut(s) 291, 2197
BspLI GGNNCC 5 cut(s) 372, 673, 1270, 1838, 2147
BspMAI CTGCAG 2 cut(s) 910, 1267
BspMI ACCTGC 2 cut(s) 1012, 1270
BspPI GGATC 4 cut(s) 970, 1206, 1442, 1882
BspQI GCTCTTC 2 cut(s) 456, 982
BspTI CTTAAG 1 cut(s) 470
BspTNI GGTCTC 2 cut(s) 520, 1076
BsrDI GCAATG 1 cut(s) 724
BsrI ACTGG 8 cut(s) 493, 541, 872, 1240, 1455, 1515, 2023, 2418
BssECI CCNNGG 6 cut(s) 135, 366, 851, 1041, 1042, 2380
BssNI GRCGYC 1 cut(s) 105
BssT1I CCWWGG 2 cut(s) 366, 2380
Bst2UI CCWGG 5 cut(s) 1043, 1711, 1896, 1929, 1967
Bst4CI ACNGT 6 cut(s) 311, 566, 632, 1979, 2118, 2298
Bst6I CTCTTC 4 cut(s) 64, 456, 982, 2227
BstACI GRCGYC 1 cut(s) 105
BstAFI CTTAAG 1 cut(s) 470
BstBAI YACGTR 1 cut(s) 1295
BstENI CCTNNNNNAGG 1 cut(s) 796
BstF5I GGATG 9 cut(s) 241, 883, 928, 955, 979, 1594, 1756, 2047, 2257
BstHHI GCGC 2 cut(s) 134, 477
BstMAI GTCTC 5 cut(s) 520, 1076, 1857, 2152, 2404
BstMWI GCNNNNNNNGC 5 cut(s) 166, 180, 472, 998, 2056
BstNI CCWGG 5 cut(s) 1043, 1711, 1896, 1929, 1967
BstNSI RCATGY 4 cut(s) 554, 666, 1814, 2330
BstPAI GACNNNNGTC 1 cut(s) 2164
BstSCI CCNGG 6 cut(s) 850, 1041, 1709, 1894, 1927, 1965
BstSFI CTRYAG 3 cut(s) 906, 1263, 1869
BstSLI GKGCMC 1 cut(s) 630
BstSNI TACGTA 1 cut(s) 1295
BstV1I GCAGC 7 cut(s) 172, 314, 617, 920, 1380, 1983, 1993
BstV2I GAAGAC 2 cut(s) 984, 1812
BstX2I RGATCY 2 cut(s) 962, 1151
BstXI CCANNNNNNTGG 1 cut(s) 746
BstYI RGATCY 2 cut(s) 962, 1151
BsuI GTATCC 1 cut(s) 2440
BsuRI GGCC 2 cut(s) 492, 791
BtrI CACGTC 1 cut(s) 120
BtsCI GGATG 9 cut(s) 241, 883, 928, 955, 979, 1594, 1756, 2047, 2257
BtsI GCAGTG 2 cut(s) 324, 1666
BtsIMutI CAGTG 8 cut(s) 324, 393, 879, 1125, 1462, 1666, 2016, 2323
BveI ACCTGC 2 cut(s) 1012, 1270
CciI TCATGA 2 cut(s) 291, 2197
CfoI GCGC 2 cut(s) 134, 477
Cfr13I GGNCC 2 cut(s) 371, 1963
CseI GACGC 1 cut(s) 836
Csp6I GTAC 8 cut(s) 528, 586, 1208, 1292, 1673, 1877, 1907, 2370
CviQI GTAC 8 cut(s) 528, 586, 1208, 1292, 1673, 1877, 1907, 2370
DraI TTTAAA 2 cut(s) 936, 1791
EaeI YGGCCR 1 cut(s) 490
Eam1104I CTCTTC 4 cut(s) 64, 456, 982, 2227
EarI CTCTTC 4 cut(s) 64, 456, 982, 2227
EciI GGCGGA 3 cut(s) 242, 858, 1749
Ecl136II GAGCTC 1 cut(s) 2050
Eco105I TACGTA 1 cut(s) 1295
Eco130I CCWWGG 2 cut(s) 366, 2380
Eco24I GRGCYC 1 cut(s) 2052
Eco31I GGTCTC 2 cut(s) 520, 1076
Eco47I GGWCC 2 cut(s) 371, 1963
Eco53kI GAGCTC 1 cut(s) 2050
Eco57I CTGAAG 7 cut(s) 351, 396, 1185, 1521, 1617, 1848, 2191
Eco88I CYCGRG 1 cut(s) 2037
EcoICRI GAGCTC 1 cut(s) 2050
EcoNI CCTNNNNNAGG 1 cut(s) 796
EcoO109I RGGNCCY 1 cut(s) 371
EcoRII CCWGG 5 cut(s) 1041, 1709, 1894, 1927, 1965
EcoT14I CCWWGG 2 cut(s) 366, 2380
EcoT22I ATGCAT 1 cut(s) 1695
EcoT38I GRGCYC 1 cut(s) 2052
ErhI CCWWGG 2 cut(s) 366, 2380
FalI AAGNNNNNCTT 6 cut(s) 450, 482, 453, 485, 994, 1026
FaqI GGGAC 2 cut(s) 384, 494
FauNDI CATATG 1 cut(s) 2151
Fnu4HI GCNGC 7 cut(s) 161, 303, 606, 909, 1369, 1997, 2007
FokI GGATG 9 cut(s) 248, 890, 915, 962, 986, 1601, 1743, 2054, 2244
FriOI GRGCYC 1 cut(s) 2052
Fsp4HI GCNGC 7 cut(s) 161, 303, 606, 909, 1369, 1997, 2007
FspBI CTAG 8 cut(s) 422, 782, 945, 984, 1032, 1089, 1953, 2381
GlaI GCGC 2 cut(s) 133, 476
GluI GCNGC 7 cut(s) 161, 303, 606, 909, 1369, 1997, 2007
GsaI CCCAGC 1 cut(s) 1729
GsuI CTGGAG 1 cut(s) 1911
HaeIII GGCC 2 cut(s) 492, 791
HapII CCGG 1 cut(s) 851
HgaI GACGC 1 cut(s) 836
HhaI GCGC 2 cut(s) 134, 477
Hin1I GRCGYC 1 cut(s) 105
Hin6I GCGC 2 cut(s) 132, 475
HinP1I GCGC 2 cut(s) 132, 475
HincII GTYRAC 1 cut(s) 2169
HindII GTYRAC 1 cut(s) 2169
HindIII AAGCTT 1 cut(s) 1860
HinfI GANTC 8 cut(s) 208, 418, 980, 1358, 1736, 1799, 1987, 2455
HpaII CCGG 1 cut(s) 851
HphI GGTGA 6 cut(s) 9, 337, 1311, 1383, 1652, 1914
Hpy166II GTNNAC 5 cut(s) 628, 1037, 1963, 2169, 2301
Hpy8I GTNNAC 5 cut(s) 628, 1037, 1963, 2169, 2301
Hpy99I CGWCG 1 cut(s) 110
HpyAV CCTTC 9 cut(s) 226, 234, 239, 505, 1074, 1461, 1487, 1592, 1908
HpyCH4III ACNGT 6 cut(s) 311, 566, 632, 1979, 2118, 2298
HpyCH4IV ACGT 5 cut(s) 105, 119, 584, 1095, 1294
HpyF10VI GCNNNNNNNGC 5 cut(s) 166, 180, 472, 998, 2056
HpySE526I ACGT 5 cut(s) 105, 119, 584, 1095, 1294
Hsp92I GRCGYC 1 cut(s) 105
HspAI GCGC 2 cut(s) 132, 475
LguI GCTCTTC 2 cut(s) 456, 982
LmnI GCTCC 3 cut(s) 1268, 1836, 2151
Lsp1109I GCAGC 7 cut(s) 172, 314, 617, 920, 1380, 1983, 1993
MaeI CTAG 8 cut(s) 422, 782, 945, 984, 1032, 1089, 1953, 2381
MaeII ACGT 5 cut(s) 105, 119, 584, 1095, 1294
MaeIII GTNAC 8 cut(s) 101, 325, 826, 1091, 1461, 2021, 2375, 2465
MflI RGATCY 2 cut(s) 962, 1151
MhlI GDGCHC 3 cut(s) 630, 1057, 2052
MlsI TGGCCA 1 cut(s) 492
MluNI TGGCCA 1 cut(s) 492
MlyI GAGTC 3 cut(s) 974, 1352, 2449
MmeI TCCRAC 2 cut(s) 88, 436
Mox20I TGGCCA 1 cut(s) 492
Mph1103I ATGCAT 1 cut(s) 1695
MroXI GAANNNNTTC 1 cut(s) 465
MscI TGGCCA 1 cut(s) 492
MslI CAYNNNNRTG 2 cut(s) 296, 1811
Msp20I TGGCCA 1 cut(s) 492
MspA1I CMGCKG 2 cut(s) 259, 2006
MspCI CTTAAG 1 cut(s) 470
MspI CCGG 1 cut(s) 851
MspR9I CCNGG 6 cut(s) 852, 1043, 1711, 1896, 1929, 1967
MvaI CCWGG 5 cut(s) 1043, 1711, 1896, 1929, 1967
MwoI GCNNNNNNNGC 5 cut(s) 166, 180, 472, 998, 2056
NciI CCSGG 1 cut(s) 852
NdeI CATATG 1 cut(s) 2151
NlaIV GGNNCC 5 cut(s) 372, 673, 1270, 1838, 2147
NmeAIII GCCGAG 1 cut(s) 160
NmuCI GTSAC 4 cut(s) 101, 325, 1091, 2375
NsiI ATGCAT 1 cut(s) 1695
NspI RCATGY 4 cut(s) 554, 666, 1814, 2330
PagI TCATGA 2 cut(s) 291, 2197
PasI CCCWGGG 1 cut(s) 1042
PciI ACATGT 1 cut(s) 1810
PciSI GCTCTTC 2 cut(s) 456, 982
PdmI GAANNNNTTC 1 cut(s) 465
PfeI GAWTC 5 cut(s) 208, 418, 1736, 1799, 1987
PflFI GACNNNGTC 1 cut(s) 1311
PkrI GCNGC 7 cut(s) 162, 304, 607, 910, 1370, 1998, 2008
PleI GAGTC 3 cut(s) 974, 1352, 2449
PpsI GAGTC 3 cut(s) 974, 1352, 2449
Ppu21I YACGTR 1 cut(s) 1295
PpuMI RGGWCCY 1 cut(s) 371
PscI ACATGT 1 cut(s) 1810
PshAI GACNNNNGTC 1 cut(s) 2164
PsiI TTATAA 1 cut(s) 1121
Psp124BI GAGCTC 1 cut(s) 2052
Psp5II RGGWCCY 1 cut(s) 371
Psp6I CCWGG 5 cut(s) 1041, 1709, 1894, 1927, 1965
PspFI CCCAGC 1 cut(s) 1725
PspGI CCWGG 5 cut(s) 1041, 1709, 1894, 1927, 1965
PspN4I GGNNCC 5 cut(s) 372, 673, 1270, 1838, 2147
PspPI GGNCC 2 cut(s) 371, 1963
PspPPI RGGWCCY 1 cut(s) 371
PstI CTGCAG 2 cut(s) 910, 1267
PsuI RGATCY 2 cut(s) 962, 1151
PsyI GACNNNGTC 1 cut(s) 1311
PvuII CAGCTG 1 cut(s) 2006
RsaI GTAC 8 cut(s) 529, 587, 1209, 1293, 1674, 1878, 1908, 2371
RsaNI GTAC 8 cut(s) 528, 586, 1208, 1292, 1673, 1877, 1907, 2370
RseI CAYNNNNRTG 2 cut(s) 296, 1811
SacI GAGCTC 1 cut(s) 2052
SapI GCTCTTC 2 cut(s) 456, 982
SatI GCNGC 7 cut(s) 161, 303, 606, 909, 1369, 1997, 2007
Sau96I GGNCC 2 cut(s) 371, 1963
SbfI CCTGCAGG 1 cut(s) 1267
SchI GAGTC 3 cut(s) 974, 1352, 2449
ScrFI CCNGG 6 cut(s) 852, 1043, 1711, 1896, 1929, 1967
SdaI CCTGCAGG 1 cut(s) 1267
SduI GDGCHC 3 cut(s) 630, 1057, 2052
SfcI CTRYAG 3 cut(s) 906, 1263, 1869
SinI GGWCC 2 cut(s) 371, 1963
SmiI ATTTAAAT 1 cut(s) 1791
SmiMI CAYNNNNRTG 2 cut(s) 296, 1811
SmlI CTYRAG 3 cut(s) 164, 470, 589
SmoI CTYRAG 3 cut(s) 164, 470, 589
SnaBI TACGTA 1 cut(s) 1295
SpeI ACTAGT 1 cut(s) 781
Sse8387I CCTGCAGG 1 cut(s) 1267
SsiI CCGC 6 cut(s) 227, 257, 346, 869, 971, 1760
SspI AATATT 2 cut(s) 1570, 2088
SspMI CTAG 8 cut(s) 422, 782, 945, 984, 1032, 1089, 1953, 2381
SstI GAGCTC 1 cut(s) 2052
StyD4I CCNGG 6 cut(s) 850, 1041, 1709, 1894, 1927, 1965
StyI CCWWGG 2 cut(s) 366, 2380
SwaI ATTTAAAT 1 cut(s) 1791
TaaI ACNGT 6 cut(s) 311, 566, 632, 1979, 2118, 2298
TaiI ACGT 5 cut(s) 108, 122, 587, 1098, 1297
TaqI TCGA 5 cut(s) 533, 610, 1339, 1886, 2458
TaqII GACCGA 1 cut(s) 167
TatI WGTACW 1 cut(s) 2369
TfiI GAWTC 5 cut(s) 208, 418, 1736, 1799, 1987
TscAI CASTG 8 cut(s) 324, 400, 879, 1132, 1462, 1666, 2023, 2323
TseFI GTSAC 4 cut(s) 101, 325, 1091, 2375
TseI GCWGC 7 cut(s) 160, 302, 605, 908, 1368, 1996, 2006
Tsp45I GTSAC 4 cut(s) 101, 325, 1091, 2375
TspDTI ATGAA 8 cut(s) 792, 990, 1098, 1595, 1607, 1795, 2186, 2419
TspGWI ACGGA 1 cut(s) 430
TspRI CASTG 8 cut(s) 324, 400, 879, 1132, 1462, 1666, 2023, 2323
Tth111I GACNNNGTC 1 cut(s) 1311
Vha464I CTTAAG 1 cut(s) 470
VneI GTGCAC 1 cut(s) 626
VpaK11BI GGWCC 2 cut(s) 371, 1963
XagI CCTNNNNNAGG 1 cut(s) 796
XapI RAATTY 3 cut(s) 1582, 2426, 2499
XbaI TCTAGA 1 cut(s) 983
XceI RCATGY 4 cut(s) 554, 666, 1814, 2330
XmaJI CCTAGG 1 cut(s) 2380
XmnI GAANNNNTTC 1 cut(s) 465
XspI CTAG 8 cut(s) 422, 782, 945, 984, 1032, 1089, 1953, 2381
ZraI GACGTC 1 cut(s) 106
Zsp2I ATGCAT 1 cut(s) 1695
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.