RchiOBHm_Chr3g0495011

phytochrome kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
3
OG0014149
Physical Location & Seq
Forward (+)
44306254 .. 44308634
2381 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1788 bp
ATGGAGAGATCAAAAGGTGTCAGCAGTGGCAGCAGCAGCAACAGCAACAGCAACAGCAACAGCATATCTCAGAAAGAGTGCATCCTTGGAGACAGAAATGTATCATTCTCTGCTTATCGCAGACCAGATCACGAAAAGGATGGCCTTGCGGCAGGTGATGACTCCACTGAAATAAGCATTTTTGAGGCCCAGAAGTACTTCAACGAAAGCATCATTGATGCCCACAAGGTGAGCAACAACAACAATAATGGTGCTATTAATATTAATAACAGAGCAATATCTTCTCCTTTGGCCAACAATGTCAGCATCGACAACATGGAACAGCCTTCGAGATTCTCGTGGGCGGCTTCCTCATCCGTTCATGATGAATACTCCAGTATTAACATGGCAAGGAATAACTACAGAGCTCGGTCTTTTCATGCGGCTGCAACGCCAACGGCTTCATCTGAAGCCAGTTGGAACAGCCAGACTGGATTGTTATCCCATCCTCCTGGTAAAGTTGCAGTTTCACTGCGGAGTCCTACTCATCATCATCATCAACATCATCATGATCACAAGAAAAGTAGAGGAATGGCCGCATTGCCATCGTCTTCGTCTTCTCCGAGAGTGAGATGGTTTAGTTTTCCAAGAAGATGTCCATGCTCTGGCAAGAAATCAGTTCGAGTTGAGGACAGAATGTCATCACAGCAACCGGCTAAGACCTCATCATCACATTACACAGCAGCAGCAGCAGCCGCCCCGAGGATTGTATCCTTGGATCTCAGAAATCAAACACCCAAGTCAAAGTCAGTGGTGGCAGCGAGTGGCGACCAGCATTTGATGTGGGATGAAGAACATCGTCGTCGTTGGGAGGGGCAGATGACTGTTAAGATACCATCAGCTGGAAACCCCCACAATCGATTATTCAGACCTCTTCCTGCTGCTGCGGAGATGCAAGCACAACATACTAACGCCTTTAGCTTTCCCGTATTGAAACTGAATGGGAGGGGCACATCGTGGTCCTCGTCGTCACCAATGTTGAAGTTGCAGCAGCAGCCTGCTACTGTAAAACAAGAACCAACTCTGGGACGGGAAGGTCATCTGGAACCCTTGACTACTAGTACTGATGAACAATCATCCACAACTATTTCAATCCACAAGCCTGCTACTACTAGTACTGATCACTCGAGTACTGGTTTCACATTCCCTGCAAGTCCCAAATCCCGAGTAATTATAAGCAATGATGACGATTTGGGAAGCGATGCAAGCTCTGATTTATTCGAGATTGAAAGCTTCTCTACTAGTACTCAAACAACAGCTACTGCCAACAACTACCCATCAGTGTTGTACCAATACAACAACTACCGCAGGGATTCAATGGAAGATGATGCCTCCAGCTTTAATGCTATTAGAGGTTTGTATCGCCGGCGAAGCAGCTTAGATAATGAGCCAATGACGACTTCATCAGCCGAGTACTGCTACGAGCCTAGTGAAGCAAGCATAGACTGGAGTGTAACCACCGCAGAGGGGTTGGACCGGCCCAGCACATCATCGGAAGCAGATTACCATCAAGATGAGCTGGAAAAGATGAGCAGACGACGCCCGTCATCCGTAGGGAGTTATGGGTTGTTGAGCTGTCGATGGGAGAAGGCGGTGAGCGTGGGGCCGAACCCAGTGAGACTAGTGAGTAGTATGCCTGCTGGTGCTGTTGGTGAGGTGATGAAGCATGTGGGGAGTAGGCCACCCTTACCCTATAAACCACGCTGCTCTCACTTGTCTATTCCTTCTGCAACATCATTCCATTCATAG

Protein Analysis

595

Amino Acids

65.22

Weight (kDa)

8.73

Isoelectric Point (pI)

61.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014149)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G04190
fragaria_vesca FvH4_4g10470
malus_domestica MD12G1110900.v1.1
prunus_persica Prupe.7G023100_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0495011
rosa_laevigata RLG00000022656
rosa_multiflora Rmu_co8188214.1_g000001 Rmu_ssc0000058.1_g000001
rosa_roxburghii Rroxscaffold_4G00319360 Rroxscaffold_6G00390850
rosa_rugosa Rorug03G0269300
rosa_samantha Rh3BG353200 Rh3CG313700 Rh3CG350100 Rh3CG350300 Rh3DG352600
rosa_wichuraiana Rw3G027740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1214
AarI CACCTGC 1 cut(s) 143
AasI GACNNNNNNGTC 1 cut(s) 1074
Acc36I ACCTGC 1 cut(s) 143
AccB7I CCANNNNNTGG 2 cut(s) 644, 881
AclWI GGATC 1 cut(s) 765
AcoI YGGCCR 2 cut(s) 291, 573
AcuI CTGAAG 1 cut(s) 468
AcyI GRCGYC 1 cut(s) 1579
AdeI CACNNNGTG 2 cut(s) 229, 996
AfaI GTAC 7 cut(s) 197, 1102, 1156, 1171, 1285, 1328, 1454
AfiI CCNNNNNNNGG 5 cut(s) 644, 741, 881, 1064, 1506
AgsI TTSAA 6 cut(s) 202, 973, 1021, 1131, 1268, 1356
AhdI GACNNNNNGTC 1 cut(s) 676
AhlI ACTAGT 4 cut(s) 1097, 1151, 1280, 1660
AjnI CCWGG 1 cut(s) 490
AjuI GAANNNNNNNTTGG 2 cut(s) 1423, 1455
Alw21I GWGCWC 1 cut(s) 409
Alw26I GTCTC 2 cut(s) 84, 1651
AlwI GGATC 1 cut(s) 765
AlwNI CAGNNNCTG 1 cut(s) 1301
Ama87I CYCGRG 3 cut(s) 739, 1165, 1203
AoxI GGCC 7 cut(s) 142, 186, 291, 573, 1517, 1643, 1718
AseI ATTAAT 2 cut(s) 258, 264
Asp700I GAANNNNTTC 1 cut(s) 197
AspS9I GGNCC 5 cut(s) 187, 999, 1513, 1518, 1643
AsuHPI GGTGA 6 cut(s) 167, 241, 1002, 1645, 1703, 1708
AvaI CYCGRG 3 cut(s) 739, 1165, 1203
AvaII GGWCC 2 cut(s) 999, 1513
BaeGI GKGCMC 1 cut(s) 992
BalI TGGCCA 1 cut(s) 293
BanII GRGCYC 1 cut(s) 409
BauI CACGAG 1 cut(s) 337
BbsI GAAGAC 2 cut(s) 582, 588
Bbv12I GWGCWC 1 cut(s) 409
BccI CCATC 8 cut(s) 134, 492, 592, 606, 883, 1324, 1554, 1614
BceAI ACGGC 1 cut(s) 453
BcgI CGANNNNNNTGC 2 cut(s) 567, 601
BciT130I CCWGG 1 cut(s) 492
BciVI GTATCC 1 cut(s) 760
BclI TGATCA 2 cut(s) 550, 1159
BcoDI GTCTC 2 cut(s) 84, 1651
BcuI ACTAGT 4 cut(s) 1097, 1151, 1280, 1660
BfaI CTAG 5 cut(s) 1098, 1152, 1281, 1467, 1661
BfmI CTRYAG 1 cut(s) 400
BfuAI ACCTGC 1 cut(s) 143
BfuI GTATCC 1 cut(s) 760
BmcAI AGTACT 6 cut(s) 197, 1102, 1156, 1171, 1285, 1454
Bme1390I CCNGG 1 cut(s) 492
Bme18I GGWCC 2 cut(s) 999, 1513
BmeRI GACNNNNNGTC 1 cut(s) 676
BmeT110I CYCGRG 3 cut(s) 739, 1165, 1203
BmgT120I GGNCC 5 cut(s) 187, 999, 1513, 1518, 1643
BmiI GGNNCC 2 cut(s) 1086, 1644
BmrFI CCNGG 1 cut(s) 492
BmrI ACTGGG 1 cut(s) 1646
BmsI GCATC 7 cut(s) 90, 208, 219, 315, 921, 1231, 1357
BmuI ACTGGG 1 cut(s) 1646
BoxI GACNNNNGTC 1 cut(s) 1582
BpiI GAAGAC 2 cut(s) 582, 588
BplI GAGNNNNNCTC 2 cut(s) 508, 540
BpmI CTGGAG 3 cut(s) 358, 1357, 1507
Bsa29I ATCGAT 1 cut(s) 898
BsaBI GATNNNNATC 2 cut(s) 478, 1545
BsaHI GRCGYC 1 cut(s) 1579
BsaJI CCNNGG 3 cut(s) 85, 740, 753
Bsc4I CCNNNNNNNGG 5 cut(s) 644, 741, 881, 1064, 1506
Bse118I RCCGGY 3 cut(s) 691, 1404, 1515
Bse1I ACTGG 6 cut(s) 375, 453, 475, 1177, 1490, 1652
Bse3DI GCAATG 2 cut(s) 578, 1225
Bse8I GATNNNNATC 2 cut(s) 478, 1545
BseBI CCWGG 1 cut(s) 492
BseCI ATCGAT 1 cut(s) 898
BseDI CCNNGG 3 cut(s) 85, 740, 753
BseGI GGATG 7 cut(s) 81, 145, 353, 484, 832, 1115, 1586
BseJI GATNNNNATC 2 cut(s) 478, 1545
BseLI CCNNNNNNNGG 5 cut(s) 644, 741, 881, 1064, 1506
BseMI GCAATG 2 cut(s) 578, 1225
BseMII CTCAG 2 cut(s) 83, 775
BseNI ACTGG 6 cut(s) 375, 453, 475, 1177, 1490, 1652
BseSI GKGCMC 1 cut(s) 992
BseYI CCCAGC 1 cut(s) 1520
BshFI GGCC 7 cut(s) 144, 188, 293, 575, 1519, 1645, 1720
BshVI ATCGAT 1 cut(s) 898
BsiHKAI GWGCWC 1 cut(s) 409
BsiHKCI CYCGRG 3 cut(s) 739, 1165, 1203
BsiSI CCGG 3 cut(s) 692, 1405, 1516
BslFI GGGAC 2 cut(s) 1080, 1179
BslI CCNNNNNNNGG 5 cut(s) 644, 741, 881, 1064, 1506
BsmAI GTCTC 2 cut(s) 84, 1651
BsmFI GGGAC 2 cut(s) 1080, 1179
BsnI GGCC 7 cut(s) 144, 188, 293, 575, 1519, 1645, 1720
BsoBI CYCGRG 3 cut(s) 739, 1165, 1203
Bsp1286I GDGCHC 2 cut(s) 409, 992
Bsp143I GATC 5 cut(s) 8, 127, 550, 757, 1159
BspANI GGCC 7 cut(s) 144, 188, 293, 575, 1519, 1645, 1720
BspCNI CTCAG 2 cut(s) 82, 774
BspDI ATCGAT 1 cut(s) 898
BspHI TCATGA 2 cut(s) 361, 547
BspLI GGNNCC 2 cut(s) 1086, 1644
BspMI ACCTGC 1 cut(s) 143
BspPI GGATC 1 cut(s) 765
BsrDI GCAATG 2 cut(s) 578, 1225
BsrFI RCCGGY 3 cut(s) 691, 1404, 1515
BsrI ACTGG 6 cut(s) 375, 453, 475, 1177, 1490, 1652
BssAI RCCGGY 3 cut(s) 691, 1404, 1515
BssECI CCNNGG 3 cut(s) 85, 740, 753
BssMI GATC 5 cut(s) 8, 127, 550, 757, 1159
BssNI GRCGYC 1 cut(s) 1579
BssSI CACGAG 1 cut(s) 337
BssT1I CCWWGG 2 cut(s) 85, 753
Bst2BI CACGAG 1 cut(s) 337
Bst2UI CCWGG 1 cut(s) 492
Bst4CI ACNGT 2 cut(s) 865, 1045
Bst6I CTCTTC 1 cut(s) 918
BstACI GRCGYC 1 cut(s) 1579
BstC8I GCNNGC 7 cut(s) 936, 1038, 1143, 1246, 1406, 1477, 1677
BstDEI CTNAG 4 cut(s) 69, 696, 761, 1417
BstF5I GGATG 7 cut(s) 81, 145, 353, 484, 832, 1115, 1586
BstKTI GATC 5 cut(s) 11, 130, 553, 760, 1162
BstMAI GTCTC 2 cut(s) 84, 1651
BstMBI GATC 5 cut(s) 8, 127, 550, 757, 1159
BstNI CCWGG 1 cut(s) 492
BstNSI RCATGY 1 cut(s) 1709
BstPAI GACNNNNGTC 1 cut(s) 1582
BstSCI CCNGG 1 cut(s) 490
BstSFI CTRYAG 1 cut(s) 400
BstSLI GKGCMC 1 cut(s) 992
BstV2I GAAGAC 2 cut(s) 582, 588
BstX2I RGATCY 1 cut(s) 757
BstXI CCANNNNNNTGG 1 cut(s) 491
BstYI RGATCY 1 cut(s) 757
Bsu15I ATCGAT 1 cut(s) 898
BsuI GTATCC 1 cut(s) 760
BsuRI GGCC 7 cut(s) 144, 188, 293, 575, 1519, 1645, 1720
BsuTUI ATCGAT 1 cut(s) 898
BtgZI GCGATG 1 cut(s) 1254
BtsCI GGATG 7 cut(s) 81, 145, 353, 484, 832, 1115, 1586
BtsI GCAGTG 2 cut(s) 31, 509
BtsIMutI CAGTG 6 cut(s) 31, 165, 509, 795, 1326, 1659
BveI ACCTGC 1 cut(s) 143
Cac8I GCNNGC 7 cut(s) 936, 1038, 1143, 1246, 1406, 1477, 1677
CaiI CAGNNNCTG 1 cut(s) 1301
CciI TCATGA 2 cut(s) 361, 547
Cfr10I RCCGGY 3 cut(s) 691, 1404, 1515
Cfr13I GGNCC 5 cut(s) 187, 999, 1513, 1518, 1643
ClaI ATCGAT 1 cut(s) 898
CseI GACGC 1 cut(s) 1587
Csp6I GTAC 7 cut(s) 196, 1101, 1155, 1170, 1284, 1327, 1453
CspCI CAANNNNNGTGG 2 cut(s) 771, 806
CviAII CATG 7 cut(s) 316, 362, 385, 419, 548, 639, 1706
CviQI GTAC 7 cut(s) 196, 1101, 1155, 1170, 1284, 1327, 1453
DdeI CTNAG 4 cut(s) 69, 696, 761, 1417
DpnI GATC 5 cut(s) 10, 129, 552, 759, 1161
DpnII GATC 5 cut(s) 8, 127, 550, 757, 1159
DraIII CACNNNGTG 2 cut(s) 229, 996
DrdI GACNNNNNNGTC 1 cut(s) 1074
DriI GACNNNNNGTC 1 cut(s) 676
DseDI GACNNNNNNGTC 1 cut(s) 1074
EaeI YGGCCR 2 cut(s) 291, 573
Eam1104I CTCTTC 1 cut(s) 918
Eam1105I GACNNNNNGTC 1 cut(s) 676
EarI CTCTTC 1 cut(s) 918
Ecl136II GAGCTC 1 cut(s) 407
Eco130I CCWWGG 2 cut(s) 85, 753
Eco24I GRGCYC 1 cut(s) 409
Eco47I GGWCC 2 cut(s) 999, 1513
Eco53kI GAGCTC 1 cut(s) 407
Eco57I CTGAAG 1 cut(s) 468
Eco88I CYCGRG 3 cut(s) 739, 1165, 1203
EcoICRI GAGCTC 1 cut(s) 407
EcoRII CCWGG 1 cut(s) 490
EcoT14I CCWWGG 2 cut(s) 85, 753
EcoT38I GRGCYC 1 cut(s) 409
ErhI CCWWGG 2 cut(s) 85, 753
FaeI CATG 7 cut(s) 319, 365, 388, 422, 551, 642, 1709
FaqI GGGAC 2 cut(s) 1080, 1179
FatI CATG 7 cut(s) 315, 361, 384, 418, 547, 638, 1705
FbaI TGATCA 2 cut(s) 550, 1159
FokI GGATG 7 cut(s) 68, 152, 340, 471, 839, 1102, 1573
FriOI GRGCYC 1 cut(s) 409
FspBI CTAG 5 cut(s) 1098, 1152, 1281, 1467, 1661
GsaI CCCAGC 1 cut(s) 1524
GsuI CTGGAG 3 cut(s) 358, 1357, 1507
HaeIII GGCC 7 cut(s) 144, 188, 293, 575, 1519, 1645, 1720
HapII CCGG 3 cut(s) 692, 1405, 1516
HgaI GACGC 1 cut(s) 1587
Hin1I GRCGYC 1 cut(s) 1579
Hin1II CATG 7 cut(s) 319, 365, 388, 422, 551, 642, 1709
HindIII AAGCTT 1 cut(s) 1270
HinfI GANTC 4 cut(s) 161, 333, 517, 1352
HpaII CCGG 3 cut(s) 692, 1405, 1516
HphI GGTGA 6 cut(s) 167, 241, 1002, 1645, 1703, 1708
Hpy188I TCNGA 7 cut(s) 72, 448, 603, 764, 908, 1252, 1534
Hpy188III TCNNGA 8 cut(s) 131, 330, 362, 548, 1082, 1203, 1261, 1550
Hpy99I CGWCG 4 cut(s) 843, 846, 1009, 1581
HpyAV CCTTC 4 cut(s) 336, 1067, 1621, 1773
HpyCH4III ACNGT 2 cut(s) 865, 1045
HpyCH4V TGCA 8 cut(s) 81, 428, 503, 934, 1027, 1190, 1244, 1769
HpyF3I CTNAG 4 cut(s) 69, 696, 761, 1417
Hsp92I GRCGYC 1 cut(s) 1579
Hsp92II CATG 7 cut(s) 319, 365, 388, 422, 551, 642, 1709
KroI GCCGGC 1 cut(s) 1404
KroNI GCCGGC 1 cut(s) 1406
Ksp22I TGATCA 2 cut(s) 550, 1159
Kzo9I GATC 5 cut(s) 8, 127, 550, 757, 1159
LweI GCATC 7 cut(s) 90, 208, 219, 315, 921, 1231, 1357
MaeI CTAG 5 cut(s) 1098, 1152, 1281, 1467, 1661
MaeIII GTNAC 2 cut(s) 1008, 1492
MalI GATC 5 cut(s) 10, 129, 552, 759, 1161
MboI GATC 5 cut(s) 8, 127, 550, 757, 1159
MboII GAAGA 7 cut(s) 273, 582, 588, 642, 842, 905, 1373
MflI RGATCY 1 cut(s) 757
MhlI GDGCHC 2 cut(s) 409, 992
MlsI TGGCCA 1 cut(s) 293
MluCI AATT 1 cut(s) 1209
MluNI TGGCCA 1 cut(s) 293
MlyI GAGTC 2 cut(s) 155, 526
MmeI TCCRAC 2 cut(s) 437, 1491
Mox20I TGGCCA 1 cut(s) 293
MreI CGCCGGCG 1 cut(s) 1404
MroNI GCCGGC 1 cut(s) 1404
MroXI GAANNNNTTC 1 cut(s) 197
MscI TGGCCA 1 cut(s) 293
MseI TTAA 5 cut(s) 258, 264, 381, 867, 1380
MslI CAYNNNNRTG 2 cut(s) 546, 1551
Msp20I TGGCCA 1 cut(s) 293
MspA1I CMGCKG 1 cut(s) 881
MspI CCGG 3 cut(s) 692, 1405, 1516
MspR9I CCNGG 1 cut(s) 492
MvaI CCWGG 1 cut(s) 492
NaeI GCCGGC 1 cut(s) 1406
NdeII GATC 5 cut(s) 8, 127, 550, 757, 1159
NgoMIV GCCGGC 1 cut(s) 1404
NlaIII CATG 7 cut(s) 319, 365, 388, 422, 551, 642, 1709
NlaIV GGNNCC 2 cut(s) 1086, 1644
NmeAIII GCCGAG 1 cut(s) 1474
NmuCI GTSAC 1 cut(s) 1008
NspI RCATGY 1 cut(s) 1709
PaeR7I CTCGAG 1 cut(s) 1165
PagI TCATGA 2 cut(s) 361, 547
PaqCI CACCTGC 1 cut(s) 143
PcsI WCGNNNNNNNCGW 3 cut(s) 335, 599, 1001
PdiI GCCGGC 1 cut(s) 1406
PdmI GAANNNNTTC 1 cut(s) 197
PfeI GAWTC 2 cut(s) 333, 1352
PflMI CCANNNNNTGG 2 cut(s) 644, 881
PleI GAGTC 2 cut(s) 155, 525
PpsI GAGTC 2 cut(s) 155, 525
PshAI GACNNNNGTC 1 cut(s) 1582
PshBI ATTAAT 2 cut(s) 258, 264
PsiI TTATAA 1 cut(s) 1214
Psp124BI GAGCTC 1 cut(s) 409
Psp6I CCWGG 1 cut(s) 490
PspFI CCCAGC 1 cut(s) 1520
PspGI CCWGG 1 cut(s) 490
PspN4I GGNNCC 2 cut(s) 1086, 1644
PspPI GGNCC 5 cut(s) 187, 999, 1513, 1518, 1643
PspXI VCTCGAGB 1 cut(s) 1165
PstNI CAGNNNCTG 1 cut(s) 1301
PsuI RGATCY 1 cut(s) 757
PvuII CAGCTG 1 cut(s) 881
RsaI GTAC 7 cut(s) 197, 1102, 1156, 1171, 1285, 1328, 1454
RsaNI GTAC 7 cut(s) 196, 1101, 1155, 1170, 1284, 1327, 1453
RseI CAYNNNNRTG 2 cut(s) 546, 1551
SacI GAGCTC 1 cut(s) 409
SaqAI TTAA 5 cut(s) 258, 264, 381, 867, 1380
Sau3AI GATC 5 cut(s) 8, 127, 550, 757, 1159
Sau96I GGNCC 5 cut(s) 187, 999, 1513, 1518, 1643
ScaI AGTACT 6 cut(s) 197, 1102, 1156, 1171, 1285, 1454
SchI GAGTC 2 cut(s) 155, 526
ScrFI CCNGG 1 cut(s) 492
SduI GDGCHC 2 cut(s) 409, 992
SfaNI GCATC 7 cut(s) 90, 208, 219, 315, 921, 1231, 1357
SfcI CTRYAG 1 cut(s) 400
Sfr274I CTCGAG 1 cut(s) 1165
SgrAI CRCCGGYG 1 cut(s) 1404
SinI GGWCC 2 cut(s) 999, 1513
SlaI CTCGAG 1 cut(s) 1165
SmiMI CAYNNNNRTG 2 cut(s) 546, 1551
SmlI CTYRAG 1 cut(s) 1165
SmoI CTYRAG 1 cut(s) 1165
SpeI ACTAGT 4 cut(s) 1097, 1151, 1280, 1660
Sse9I AATT 1 cut(s) 1209
SspI AATATT 1 cut(s) 262
SspMI CTAG 5 cut(s) 1098, 1152, 1281, 1467, 1661
SstI GAGCTC 1 cut(s) 409
StyD4I CCNGG 1 cut(s) 490
StyI CCWWGG 2 cut(s) 85, 753
TaaI ACNGT 2 cut(s) 865, 1045
TaqI TCGA 7 cut(s) 309, 329, 661, 898, 1166, 1260, 1618
TaqII GACCGA 1 cut(s) 399
TasI AATT 1 cut(s) 1209
TatI WGTACW 6 cut(s) 195, 1100, 1154, 1169, 1283, 1452
TauI GCSGC 5 cut(s) 152, 347, 425, 578, 737
TfiI GAWTC 2 cut(s) 333, 1352
Tru1I TTAA 5 cut(s) 258, 264, 381, 867, 1380
Tru9I TTAA 5 cut(s) 258, 264, 381, 867, 1380
TscAI CASTG 6 cut(s) 31, 172, 516, 795, 1326, 1659
TseFI GTSAC 1 cut(s) 1008
Tsp45I GTSAC 1 cut(s) 1008
TspDTI ATGAA 9 cut(s) 350, 381, 407, 432, 843, 1122, 1431, 1715, 1773
TspGWI ACGGA 2 cut(s) 346, 1579
TspRI CASTG 6 cut(s) 31, 172, 516, 795, 1326, 1659
Van91I CCANNNNNTGG 2 cut(s) 644, 881
VpaK11BI GGWCC 2 cut(s) 999, 1513
VspI ATTAAT 2 cut(s) 258, 264
XceI RCATGY 1 cut(s) 1709
XcmI CCANNNNNNNNNTGG 1 cut(s) 382
XhoI CTCGAG 1 cut(s) 1165
XmnI GAANNNNTTC 1 cut(s) 197
XspI CTAG 5 cut(s) 1098, 1152, 1281, 1467, 1661
ZrmI AGTACT 6 cut(s) 197, 1102, 1156, 1171, 1285, 1454
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.