RLG00000022656

phytochrome kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr5
OG0014149
Physical Location & Seq
Reverse (-)
6746676 .. 6748466
1791 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000022656

Sequence Viewer

Length: 1791 bp
ATGGAGAGATCAAAAGGTGTCAGCAGTGGCAGCAGCAGCAACAGCATATCTCAGAAAGAGTGCATCCTTGGAGACAGAAATGTATCATTCTCTGCGTATCGCAGACCAGATCACGAAAAGGATGGCCTTGCGGCAGGTGATGACTCCACTGAAATAAGCATTTTTGAGGCCCAGAAGTACTTCAACGAAAGCATCATTGATGCCCACAAGGTGAGCAACAACAACAATAATGGTGCTATTAATATTAACAACAGAGCAATATCTTCTCCTTTGGCCAATAATGTCAGCATCGACAACACGGAACAGCTTTCGAGATTCTCGTGGGCGGCTTCCTCATCCGTTCATGATGAATACTCCAGTATTAACATGGCAAGGAATAACTACAGAGCTCGGTCTTTTCATGCGGCTGCAACGCCAACGGCTTCATCTGAAGCCAGTTGGAACAGCCAGACCGGATTGTTATCCCATCCTCCTGGTACAGTTGCAGTCTCACTGCGGAGTCCTACTCATCATCATCATCATCAACATCATCATGATCACAAGAGAAGCAGAGGAATGGCCGCATTGCCATCGTCTTCGTCTTCTCCGAGAGTGAGATGGTTTAGTTTTCCAAGAAGATGTCCATGCTCTGGCAAGAAATCAGTTCGAGTTGAGGAAAAAATGTCATCCCAGCAACCGGCTAAGACCTCATCATCACATTACACAGCAGCAGCAGCAGCCGCTCCGAGGAGTATATCCTTGGATCCCAGAAATCAAACACCCAAGTCAAAGTCAGTGGTGGCAGCGCGTGACGACCAGCATTTGATGTGGGATGAACAACATCGTCGTCGTTGGGAGGGGCAGATGACTGTTAAGATACCATCAGCTGGAAACCCCCATAATCGATTATTCAGACCTCATCCTGCTGCTGCGGAAATGCAAGCACAACATACTAACGCCTTTAGCTTTCCCATATTGAAACTGAATGGGAGGGGCACATCGTGGTCCTCGTCGTCACCAATGTTGAAGTTGCAGCAGCAGCCTGCTACTGTAAAACAAGAACCAACTCTGGGACGGGAAGGTCTGGAACCCTTGACTACTAGTACTGATGAACAATCATCCACAACTATTTCAATCCACAAGCCTGCTACTACTAGTACTGATCACTCGAGTACTGGTTTCACATTCCCTGCAAGTCCCAAATCCCGAGTAATTATAAGCAATGATGACGATTTGGGAAGCGATGCGAGCTCTGATTTATTCGAGATTGAAAGCTTCTCTACTAGTACTCAAACAACAGCTACTGCCAACAACTACTCATCAGTGTTGTACCAATACAACAACTACCGCAGGGATTCAATGGAAGATGATGCCTCCAGCTTTAATGCTATTAGAGGTTTGTATCGCCGCCGAAGCAGCTTAGATAATGAGCCAATGACGCCTTCATCAGCCGAGTACTGCTACGAGCCTAGTGAAGCAAGCATAGATTGGAGTGTAACCACCGCAGAGGGGTTGGACCGTCCCAGCACATCATCGGAAGCAGATTACCATCAAGATGAGCTGGAAAAGATGAGCAGACGACGCTCGTCATCAGCAGGAAGTTATGGGTTGTTGAGCTGTCGATGGGAGAAGGCGGTGAGCGTGGGACCGAACCCAGTGAGACTAGTGAGTAGTATGCCTGCTGGTGCTAGTGCTGGTGCTGTTGGTGAGGTGATGAAGCATGTGGGGAGTAGGCCACCCAGTAGGCCACCCTTACCCTTACCACGCTGCTCTCACTTGTCTATTCCTTCTGCAACATCATTCCATTCATAG

Protein Analysis

597

Amino Acids

65.22

Weight (kDa)

8.75

Isoelectric Point (pI)

65.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014149)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G04190
fragaria_vesca FvH4_4g10470
malus_domestica MD12G1110900.v1.1
prunus_persica Prupe.7G023100_v2.0.a1
rosa_chinensis RchiOBHm_Chr3g0495011
rosa_laevigata RLG00000022656
rosa_multiflora Rmu_co8188214.1_g000001 Rmu_ssc0000058.1_g000001
rosa_roxburghii Rroxscaffold_4G00319360 Rroxscaffold_6G00390850
rosa_rugosa Rorug03G0269300
rosa_samantha Rh3BG353200 Rh3CG313700 Rh3CG350100 Rh3CG350300 Rh3DG352600
rosa_wichuraiana Rw3G027740

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1196
AarI CACCTGC 1 cut(s) 125
AasI GACNNNNNNGTC 1 cut(s) 1059
Acc36I ACCTGC 1 cut(s) 125
AccB7I CCANNNNNTGG 2 cut(s) 629, 866
AccBSI CCGCTC 1 cut(s) 722
AccII CGCG 1 cut(s) 787
AclWI GGATC 2 cut(s) 737, 750
AcoI YGGCCR 2 cut(s) 273, 558
AcuI CTGAAG 1 cut(s) 450
AcyI GRCGYC 1 cut(s) 1418
AdeI CACNNNGTG 2 cut(s) 211, 981
AfaI GTAC 8 cut(s) 179, 478, 1084, 1138, 1153, 1267, 1310, 1436
AfiI CCNNNNNNNGG 6 cut(s) 629, 676, 726, 866, 1049, 1488
AgsI TTSAA 6 cut(s) 184, 958, 1006, 1113, 1250, 1338
AhlI ACTAGT 4 cut(s) 1079, 1133, 1262, 1642
AjnI CCWGG 1 cut(s) 472
AjuI GAANNNNNNNTTGG 2 cut(s) 1405, 1437
Alw21I GWGCWC 2 cut(s) 391, 1232
Alw26I GTCTC 3 cut(s) 66, 493, 1633
AlwI GGATC 2 cut(s) 737, 750
AlwNI CAGNNNCTG 1 cut(s) 1283
Ama87I CYCGRG 2 cut(s) 1147, 1185
AoxI GGCC 6 cut(s) 124, 168, 273, 558, 1712, 1724
AseI ATTAAT 1 cut(s) 240
Asp700I GAANNNNTTC 1 cut(s) 179
AspLEI GCGC 1 cut(s) 787
AspS9I GGNCC 4 cut(s) 169, 984, 1495, 1625
AsuHPI GGTGA 6 cut(s) 149, 223, 987, 1627, 1697, 1702
AvaI CYCGRG 2 cut(s) 1147, 1185
AvaII GGWCC 3 cut(s) 984, 1495, 1625
BaeGI GKGCMC 1 cut(s) 977
BalI TGGCCA 1 cut(s) 275
BamHI GGATCC 1 cut(s) 742
BanII GRGCYC 2 cut(s) 391, 1232
BauI CACGAG 1 cut(s) 319
BbsI GAAGAC 2 cut(s) 567, 573
Bbv12I GWGCWC 2 cut(s) 391, 1232
BccI CCATC 7 cut(s) 116, 474, 577, 591, 868, 1536, 1596
BceAI ACGGC 1 cut(s) 435
BcgI CGANNNNNNTGC 2 cut(s) 552, 586
BciT130I CCWGG 1 cut(s) 474
BclI TGATCA 2 cut(s) 535, 1141
BcoDI GTCTC 3 cut(s) 66, 493, 1633
BcuI ACTAGT 4 cut(s) 1079, 1133, 1262, 1642
BfaI CTAG 6 cut(s) 1080, 1134, 1263, 1449, 1643, 1668
BfmI CTRYAG 1 cut(s) 382
BfuAI ACCTGC 1 cut(s) 125
BmcAI AGTACT 6 cut(s) 179, 1084, 1138, 1153, 1267, 1436
Bme1390I CCNGG 1 cut(s) 474
Bme18I GGWCC 3 cut(s) 984, 1495, 1625
BmeT110I CYCGRG 2 cut(s) 1147, 1185
BmgT120I GGNCC 4 cut(s) 169, 984, 1495, 1625
BmiI GGNNCC 3 cut(s) 744, 1068, 1626
BmrFI CCNGG 1 cut(s) 474
BmrI ACTGGG 2 cut(s) 1628, 1713
BmsI GCATC 6 cut(s) 72, 190, 201, 297, 1213, 1339
BmuI ACTGGG 2 cut(s) 1628, 1713
BoxI GACNNNNGTC 1 cut(s) 1564
BpiI GAAGAC 2 cut(s) 567, 573
BplI GAGNNNNNCTC 2 cut(s) 490, 522
BpmI CTGGAG 2 cut(s) 340, 1339
Bsa29I ATCGAT 1 cut(s) 883
BsaBI GATNNNNATC 2 cut(s) 460, 1527
BsaHI GRCGYC 1 cut(s) 1418
BsaJI CCNNGG 3 cut(s) 67, 725, 738
BsaWI WCCGGW 1 cut(s) 452
Bsc4I CCNNNNNNNGG 6 cut(s) 629, 676, 726, 866, 1049, 1488
Bse118I RCCGGY 1 cut(s) 676
Bse1I ACTGG 5 cut(s) 357, 435, 1159, 1634, 1719
Bse3DI GCAATG 2 cut(s) 563, 1207
Bse8I GATNNNNATC 2 cut(s) 460, 1527
BseBI CCWGG 1 cut(s) 474
BseCI ATCGAT 1 cut(s) 883
BseDI CCNNGG 3 cut(s) 67, 725, 738
BseGI GGATG 8 cut(s) 63, 127, 335, 466, 665, 817, 898, 1097
BseJI GATNNNNATC 2 cut(s) 460, 1527
BseLI CCNNNNNNNGG 6 cut(s) 629, 676, 726, 866, 1049, 1488
BseMI GCAATG 2 cut(s) 563, 1207
BseMII CTCAG 1 cut(s) 65
BseNI ACTGG 5 cut(s) 357, 435, 1159, 1634, 1719
BseRI GAGGAG 1 cut(s) 742
BseSI GKGCMC 1 cut(s) 977
BseYI CCCAGC 2 cut(s) 669, 1502
Bsh1236I CGCG 1 cut(s) 787
BshFI GGCC 6 cut(s) 126, 170, 275, 560, 1714, 1726
BshVI ATCGAT 1 cut(s) 883
BsiHKAI GWGCWC 2 cut(s) 391, 1232
BsiHKCI CYCGRG 2 cut(s) 1147, 1185
BsiSI CCGG 2 cut(s) 453, 677
BslFI GGGAC 4 cut(s) 1065, 1161, 1485, 1638
BslI CCNNNNNNNGG 6 cut(s) 629, 676, 726, 866, 1049, 1488
BsmAI GTCTC 3 cut(s) 66, 493, 1633
BsmFI GGGAC 4 cut(s) 1065, 1161, 1485, 1638
BsnI GGCC 6 cut(s) 126, 170, 275, 560, 1714, 1726
BsoBI CYCGRG 2 cut(s) 1147, 1185
Bsp1286I GDGCHC 3 cut(s) 391, 977, 1232
Bsp143I GATC 5 cut(s) 8, 109, 535, 742, 1141
BspANI GGCC 6 cut(s) 126, 170, 275, 560, 1714, 1726
BspCNI CTCAG 1 cut(s) 64
BspDI ATCGAT 1 cut(s) 883
BspFNI CGCG 1 cut(s) 787
BspHI TCATGA 2 cut(s) 343, 532
BspLI GGNNCC 3 cut(s) 744, 1068, 1626
BspMI ACCTGC 1 cut(s) 125
BspPI GGATC 2 cut(s) 737, 750
BsrBI CCGCTC 1 cut(s) 722
BsrDI GCAATG 2 cut(s) 563, 1207
BsrFI RCCGGY 1 cut(s) 676
BsrI ACTGG 5 cut(s) 357, 435, 1159, 1634, 1719
BssAI RCCGGY 1 cut(s) 676
BssECI CCNNGG 3 cut(s) 67, 725, 738
BssMI GATC 5 cut(s) 8, 109, 535, 742, 1141
BssNI GRCGYC 1 cut(s) 1418
BssSI CACGAG 1 cut(s) 319
BssT1I CCWWGG 2 cut(s) 67, 738
Bst2BI CACGAG 1 cut(s) 319
Bst2UI CCWGG 1 cut(s) 474
Bst4CI ACNGT 4 cut(s) 481, 850, 1030, 1499
BstACI GRCGYC 1 cut(s) 1418
BstC8I GCNNGC 6 cut(s) 921, 1023, 1125, 1228, 1459, 1659
BstDEI CTNAG 3 cut(s) 51, 681, 1399
BstF5I GGATG 8 cut(s) 63, 127, 335, 466, 665, 817, 898, 1097
BstFNI CGCG 1 cut(s) 787
BstHHI GCGC 1 cut(s) 787
BstKTI GATC 5 cut(s) 11, 112, 538, 745, 1144
BstMAI GTCTC 3 cut(s) 66, 493, 1633
BstMBI GATC 5 cut(s) 8, 109, 535, 742, 1141
BstNI CCWGG 1 cut(s) 474
BstNSI RCATGY 1 cut(s) 1703
BstPAI GACNNNNGTC 1 cut(s) 1564
BstSCI CCNGG 1 cut(s) 472
BstSFI CTRYAG 1 cut(s) 382
BstSLI GKGCMC 1 cut(s) 977
BstUI CGCG 1 cut(s) 787
BstV2I GAAGAC 2 cut(s) 567, 573
BstX2I RGATCY 1 cut(s) 742
BstXI CCANNNNNNTGG 1 cut(s) 473
BstYI RGATCY 1 cut(s) 742
Bsu15I ATCGAT 1 cut(s) 883
BsuRI GGCC 6 cut(s) 126, 170, 275, 560, 1714, 1726
BsuTUI ATCGAT 1 cut(s) 883
BtgZI GCGATG 1 cut(s) 1236
BtsCI GGATG 8 cut(s) 63, 127, 335, 466, 665, 817, 898, 1097
BtsI GCAGTG 2 cut(s) 31, 491
BtsIMutI CAGTG 6 cut(s) 31, 147, 491, 780, 1308, 1641
BveI ACCTGC 1 cut(s) 125
Cac8I GCNNGC 6 cut(s) 921, 1023, 1125, 1228, 1459, 1659
CaiI CAGNNNCTG 1 cut(s) 1283
CciI TCATGA 2 cut(s) 343, 532
CfoI GCGC 1 cut(s) 787
Cfr10I RCCGGY 1 cut(s) 676
Cfr13I GGNCC 4 cut(s) 169, 984, 1495, 1625
ClaI ATCGAT 1 cut(s) 883
CseI GACGC 2 cut(s) 1426, 1569
Csp6I GTAC 8 cut(s) 178, 477, 1083, 1137, 1152, 1266, 1309, 1435
CspCI CAANNNNNGTGG 2 cut(s) 756, 791
CviAII CATG 6 cut(s) 344, 367, 401, 533, 624, 1700
CviQI GTAC 8 cut(s) 178, 477, 1083, 1137, 1152, 1266, 1309, 1435
DdeI CTNAG 3 cut(s) 51, 681, 1399
DpnI GATC 5 cut(s) 10, 111, 537, 744, 1143
DpnII GATC 5 cut(s) 8, 109, 535, 742, 1141
DraIII CACNNNGTG 2 cut(s) 211, 981
DrdI GACNNNNNNGTC 1 cut(s) 1059
DseDI GACNNNNNNGTC 1 cut(s) 1059
EaeI YGGCCR 2 cut(s) 273, 558
Ecl136II GAGCTC 2 cut(s) 389, 1230
Eco130I CCWWGG 2 cut(s) 67, 738
Eco24I GRGCYC 2 cut(s) 391, 1232
Eco47I GGWCC 3 cut(s) 984, 1495, 1625
Eco53kI GAGCTC 2 cut(s) 389, 1230
Eco57I CTGAAG 1 cut(s) 450
Eco88I CYCGRG 2 cut(s) 1147, 1185
EcoICRI GAGCTC 2 cut(s) 389, 1230
EcoRII CCWGG 1 cut(s) 472
EcoT14I CCWWGG 2 cut(s) 67, 738
EcoT38I GRGCYC 2 cut(s) 391, 1232
ErhI CCWWGG 2 cut(s) 67, 738
FaeI CATG 6 cut(s) 347, 370, 404, 536, 627, 1703
FaqI GGGAC 4 cut(s) 1065, 1161, 1485, 1638
FatI CATG 6 cut(s) 343, 366, 400, 532, 623, 1699
FbaI TGATCA 2 cut(s) 535, 1141
FokI GGATG 8 cut(s) 50, 134, 322, 453, 652, 824, 885, 1084
FriOI GRGCYC 2 cut(s) 391, 1232
FspBI CTAG 6 cut(s) 1080, 1134, 1263, 1449, 1643, 1668
GlaI GCGC 1 cut(s) 786
GsaI CCCAGC 2 cut(s) 673, 1506
GsuI CTGGAG 2 cut(s) 340, 1339
HaeIII GGCC 6 cut(s) 126, 170, 275, 560, 1714, 1726
HapII CCGG 2 cut(s) 453, 677
HgaI GACGC 2 cut(s) 1426, 1569
HhaI GCGC 1 cut(s) 787
Hin1I GRCGYC 1 cut(s) 1418
Hin1II CATG 6 cut(s) 347, 370, 404, 536, 627, 1703
Hin6I GCGC 1 cut(s) 785
HinP1I GCGC 1 cut(s) 785
HindIII AAGCTT 1 cut(s) 1252
HinfI GANTC 4 cut(s) 143, 315, 499, 1334
HpaII CCGG 2 cut(s) 453, 677
HphI GGTGA 6 cut(s) 149, 223, 987, 1627, 1697, 1702
Hpy188I TCNGA 7 cut(s) 54, 430, 588, 726, 893, 1234, 1516
Hpy188III TCNNGA 8 cut(s) 113, 312, 344, 533, 1064, 1185, 1243, 1532
Hpy99I CGWCG 4 cut(s) 828, 831, 994, 1563
HpyAV CCTTC 4 cut(s) 1052, 1431, 1603, 1776
HpyCH4III ACNGT 4 cut(s) 481, 850, 1030, 1499
HpyCH4V TGCA 7 cut(s) 63, 410, 485, 919, 1012, 1172, 1772
HpyF3I CTNAG 3 cut(s) 51, 681, 1399
Hsp92I GRCGYC 1 cut(s) 1418
Hsp92II CATG 6 cut(s) 347, 370, 404, 536, 627, 1703
HspAI GCGC 1 cut(s) 785
Ksp22I TGATCA 2 cut(s) 535, 1141
Kzo9I GATC 5 cut(s) 8, 109, 535, 742, 1141
LmnI GCTCC 1 cut(s) 727
LweI GCATC 6 cut(s) 72, 190, 201, 297, 1213, 1339
MaeI CTAG 6 cut(s) 1080, 1134, 1263, 1449, 1643, 1668
MaeIII GTNAC 3 cut(s) 788, 993, 1474
MalI GATC 5 cut(s) 10, 111, 537, 744, 1143
MbiI CCGCTC 1 cut(s) 722
MboI GATC 5 cut(s) 8, 109, 535, 742, 1141
MboII GAAGA 5 cut(s) 255, 567, 573, 627, 1355
MflI RGATCY 1 cut(s) 742
MhlI GDGCHC 3 cut(s) 391, 977, 1232
MlsI TGGCCA 1 cut(s) 275
MluCI AATT 1 cut(s) 1191
MluNI TGGCCA 1 cut(s) 275
MlyI GAGTC 2 cut(s) 137, 508
MmeI TCCRAC 2 cut(s) 419, 1473
Mox20I TGGCCA 1 cut(s) 275
MroXI GAANNNNTTC 1 cut(s) 179
MscI TGGCCA 1 cut(s) 275
MseI TTAA 5 cut(s) 240, 246, 363, 852, 1362
MslI CAYNNNNRTG 2 cut(s) 531, 1533
Msp20I TGGCCA 1 cut(s) 275
MspA1I CMGCKG 1 cut(s) 866
MspI CCGG 2 cut(s) 453, 677
MspR9I CCNGG 1 cut(s) 474
MvaI CCWGG 1 cut(s) 474
MvnI CGCG 1 cut(s) 787
NdeII GATC 5 cut(s) 8, 109, 535, 742, 1141
NlaIII CATG 6 cut(s) 347, 370, 404, 536, 627, 1703
NlaIV GGNNCC 3 cut(s) 744, 1068, 1626
NmeAIII GCCGAG 1 cut(s) 1456
NmuCI GTSAC 2 cut(s) 788, 993
NspI RCATGY 1 cut(s) 1703
PaeR7I CTCGAG 1 cut(s) 1147
PagI TCATGA 2 cut(s) 343, 532
PaqCI CACCTGC 1 cut(s) 125
PcsI WCGNNNNNNNCGW 3 cut(s) 317, 584, 986
PdmI GAANNNNTTC 1 cut(s) 179
PfeI GAWTC 2 cut(s) 315, 1334
PflMI CCANNNNNTGG 2 cut(s) 629, 866
PleI GAGTC 2 cut(s) 137, 507
PpsI GAGTC 2 cut(s) 137, 507
PshAI GACNNNNGTC 1 cut(s) 1564
PshBI ATTAAT 1 cut(s) 240
PsiI TTATAA 1 cut(s) 1196
Psp124BI GAGCTC 2 cut(s) 391, 1232
Psp6I CCWGG 1 cut(s) 472
PspFI CCCAGC 2 cut(s) 669, 1502
PspGI CCWGG 1 cut(s) 472
PspN4I GGNNCC 3 cut(s) 744, 1068, 1626
PspPI GGNCC 4 cut(s) 169, 984, 1495, 1625
PspXI VCTCGAGB 1 cut(s) 1147
PstNI CAGNNNCTG 1 cut(s) 1283
PsuI RGATCY 1 cut(s) 742
PvuII CAGCTG 1 cut(s) 866
RsaI GTAC 8 cut(s) 179, 478, 1084, 1138, 1153, 1267, 1310, 1436
RsaNI GTAC 8 cut(s) 178, 477, 1083, 1137, 1152, 1266, 1309, 1435
RseI CAYNNNNRTG 2 cut(s) 531, 1533
SacI GAGCTC 2 cut(s) 391, 1232
SaqAI TTAA 5 cut(s) 240, 246, 363, 852, 1362
Sau3AI GATC 5 cut(s) 8, 109, 535, 742, 1141
Sau96I GGNCC 4 cut(s) 169, 984, 1495, 1625
ScaI AGTACT 6 cut(s) 179, 1084, 1138, 1153, 1267, 1436
SchI GAGTC 2 cut(s) 137, 508
ScrFI CCNGG 1 cut(s) 474
SduI GDGCHC 3 cut(s) 391, 977, 1232
SfaNI GCATC 6 cut(s) 72, 190, 201, 297, 1213, 1339
SfcI CTRYAG 1 cut(s) 382
Sfr274I CTCGAG 1 cut(s) 1147
SinI GGWCC 3 cut(s) 984, 1495, 1625
SlaI CTCGAG 1 cut(s) 1147
SmiMI CAYNNNNRTG 2 cut(s) 531, 1533
SmlI CTYRAG 1 cut(s) 1147
SmoI CTYRAG 1 cut(s) 1147
SpeI ACTAGT 4 cut(s) 1079, 1133, 1262, 1642
Sse9I AATT 1 cut(s) 1191
SspI AATATT 1 cut(s) 244
SspMI CTAG 6 cut(s) 1080, 1134, 1263, 1449, 1643, 1668
SstI GAGCTC 2 cut(s) 391, 1232
StyD4I CCNGG 1 cut(s) 472
StyI CCWWGG 2 cut(s) 67, 738
TaaI ACNGT 4 cut(s) 481, 850, 1030, 1499
TaqI TCGA 7 cut(s) 291, 311, 646, 883, 1148, 1242, 1600
TaqII GACCGA 2 cut(s) 381, 1642
TasI AATT 1 cut(s) 1191
TatI WGTACW 6 cut(s) 177, 1082, 1136, 1151, 1265, 1434
TauI GCSGC 6 cut(s) 134, 329, 407, 563, 722, 1389
TfiI GAWTC 2 cut(s) 315, 1334
Tru1I TTAA 5 cut(s) 240, 246, 363, 852, 1362
Tru9I TTAA 5 cut(s) 240, 246, 363, 852, 1362
TscAI CASTG 6 cut(s) 31, 154, 498, 780, 1308, 1641
TseFI GTSAC 2 cut(s) 788, 993
Tsp45I GTSAC 2 cut(s) 788, 993
TspDTI ATGAA 9 cut(s) 332, 363, 389, 414, 828, 1104, 1413, 1709, 1776
TspGWI ACGGA 2 cut(s) 314, 328
TspRI CASTG 6 cut(s) 31, 154, 498, 780, 1308, 1641
Van91I CCANNNNNTGG 2 cut(s) 629, 866
VpaK11BI GGWCC 3 cut(s) 984, 1495, 1625
VspI ATTAAT 1 cut(s) 240
XceI RCATGY 1 cut(s) 1703
XcmI CCANNNNNNNNNTGG 1 cut(s) 364
XhoI CTCGAG 1 cut(s) 1147
XmnI GAANNNNTTC 1 cut(s) 179
XspI CTAG 6 cut(s) 1080, 1134, 1263, 1449, 1643, 1668
ZrmI AGTACT 6 cut(s) 179, 1084, 1138, 1153, 1267, 1436
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.